Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0003343

Physical Location & Seq

Genomic Coordinates Reverse (-)

26499228 .. 26500193

Gene Structure 966 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G299700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 462 bp

ATGGTAATGGGTGCTGCAGGTTCAACAGTATACTTCAATTTGAGACTTAGGCACCCAACACTGGACATGCCCCTTATAGATTATGATCTAGCATTGCTCTTTCAGCCAATGCTCATGCTAGGCATCAGCATAGGAGTTGCCTTCAACGTCATGTTCGCCAACTGGATGGTCACAGTTCTACTTATCATTCTCTTCTTAGGTACAGCAGCAAAAGCTTTAATGAAGGGCATAGAAACATGGAAGAAAGAGACAATGATGAAGAAGGAAGCAGAAAAGCAGTTGGAATCGGAGTCCAAACCTGGCGTTGCAGAGGGTTCTGGAGAAGACTATAAACTGCTACCTAGTGGTCCAGCTTCATTGCCAGATGAGCAGGTAAGTTCCAAGAACATTCTAAGCCGGTATTCTTTTGCAACTTCTTTGTTATCTGCAATTTTTAAGTGGTTTCAGCTTTTGTTCTATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TauE

Protein Analysis

154

Amino Acids

17.07

Weight (kDa)

6.58

Isoelectric Point (pI)

36.37

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003343)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G66750
fragaria_vesca	FvH4_1g13430 FvH4_1g13430 FvH4_1g13430 FvH4_1g13440 FvH4_1g13440
malus_domestica	MD02G1149400.v1.1 MD02G1149600.v1.1 MD15G1264100.v1.1 MD15G1264200.v1.1
prunus_persica	Prupe.3G299700_v2.0.a1 Prupe.7G153300_v2.0.a1 Prupe.7G153400_v2.0.a1 Prupe.7G153400_v2.0.a1
pyrus_communis	pycom02g11750 pycom02g11770 pycom15g22990
rosa_chinensis	RchiOBHm_Chr2g0101811 RchiOBHm_Chr2g0101821
rosa_laevigata	RLG00000017102 RLG00000017103
rosa_multiflora	Rmu_co8045018.1_g000001 Rmu_sc0000838.1_g000003
rosa_roxburghii	Rroxscaffold_2G00141020
rosa_rugosa	Rorug02G0102000 Rorug07G0333200
rosa_samantha	Rh2AG149400 Rh2AG149500 Rh2BG155000 Rh2BG155100 Rh2CG155400 Rh2CG155500 Rh2DG155200 Rh2DG155300
rosa_wichuraiana	Rw2G011690 Rw2G011700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	8, 361
AccB1I	GGYRCC	1 cut(s)	51
AccI	GTMKAC	1 cut(s)	30
AfaI	GTAC	1 cut(s)	202
AfiI	CCNNNNNNNGG	1 cut(s)	61
AgsI	TTSAA	3 cut(s)	24, 37, 145
AjnI	CCWGG	1 cut(s)	298
AluBI	AGCT	3 cut(s)	215, 353, 448
AluI	AGCT	3 cut(s)	215, 353, 448
Alw26I	GTCTC	2 cut(s)	37, 242
ApeKI	GCWGC	2 cut(s)	14, 206
AspS9I	GGNCC	1 cut(s)	347
AvaII	GGWCC	1 cut(s)	347
BanI	GGYRCC	1 cut(s)	51
BbsI	GAAGAC	1 cut(s)	330
BbvI	GCAGC	1 cut(s)	218
BccI	CCATC	1 cut(s)	160
BciT130I	CCWGG	1 cut(s)	300
BcoDI	GTCTC	2 cut(s)	37, 242
BfaI	CTAG	3 cut(s)	89, 119, 342
BfmI	CTRYAG	1 cut(s)	15
BfuAI	ACCTGC	2 cut(s)	8, 361
BisI	GCNGC	2 cut(s)	15, 207
BlsI	GCNGC	2 cut(s)	16, 208
Bme1390I	CCNGG	1 cut(s)	300
Bme18I	GGWCC	1 cut(s)	347
BmgT120I	GGNCC	1 cut(s)	347
BmiI	GGNNCC	1 cut(s)	53
BmrFI	CCNGG	1 cut(s)	300
BmsI	GCATC	1 cut(s)	132
BpiI	GAAGAC	1 cut(s)	330
BpmI	CTGGAG	1 cut(s)	339
BsaBI	GATNNNNATC	1 cut(s)	84
Bsc4I	CCNNNNNNNGG	1 cut(s)	61
Bse118I	RCCGGY	1 cut(s)	396
Bse1I	ACTGG	2 cut(s)	66, 167
Bse3DI	GCAATG	2 cut(s)	92, 356
Bse8I	GATNNNNATC	1 cut(s)	84
BseBI	CCWGG	1 cut(s)	300
BseGI	GGATG	1 cut(s)	171
BseJI	GATNNNNATC	1 cut(s)	84
BseLI	CCNNNNNNNGG	1 cut(s)	61
BseMI	GCAATG	2 cut(s)	92, 356
BseNI	ACTGG	2 cut(s)	66, 167
BseXI	GCAGC	1 cut(s)	218
BshNI	GGYRCC	1 cut(s)	51
BsiSI	CCGG	1 cut(s)	397
BslI	CCNNNNNNNGG	1 cut(s)	61
BsmAI	GTCTC	2 cut(s)	37, 242
Bsp143I	GATC	1 cut(s)	85
BspLI	GGNNCC	1 cut(s)	53
BspMAI	CTGCAG	1 cut(s)	19
BspMI	ACCTGC	2 cut(s)	8, 361
BspT107I	GGYRCC	1 cut(s)	51
BsrDI	GCAATG	2 cut(s)	92, 356
BsrFI	RCCGGY	1 cut(s)	396
BsrI	ACTGG	2 cut(s)	66, 167
BssAI	RCCGGY	1 cut(s)	396
BssMI	GATC	1 cut(s)	85
BssNAI	GTATAC	1 cut(s)	31
Bst1107I	GTATAC	1 cut(s)	31
Bst2UI	CCWGG	1 cut(s)	300
Bst4CI	ACNGT	2 cut(s)	28, 175
Bst6I	CTCTTC	1 cut(s)	197
BstDEI	CTNAG	3 cut(s)	47, 196, 392
BstF5I	GGATG	1 cut(s)	171
BstKTI	GATC	1 cut(s)	88
BstMAI	GTCTC	2 cut(s)	37, 242
BstMBI	GATC	1 cut(s)	85
BstMWI	GCNNNNNNNGC	3 cut(s)	103, 212, 367
BstNI	CCWGG	1 cut(s)	300
BstNSI	RCATGY	1 cut(s)	70
BstSCI	CCNGG	1 cut(s)	298
BstSFI	CTRYAG	1 cut(s)	15
BstV1I	GCAGC	1 cut(s)	218
BstV2I	GAAGAC	1 cut(s)	330
BstXI	CCANNNNNNTGG	1 cut(s)	166
BstZ17I	GTATAC	1 cut(s)	31
BtsCI	GGATG	1 cut(s)	171
BtsIMutI	CAGTG	1 cut(s)	59
BveI	ACCTGC	2 cut(s)	8, 361
Cfr10I	RCCGGY	1 cut(s)	396
Cfr13I	GGNCC	1 cut(s)	347
Csp6I	GTAC	1 cut(s)	201
CviAII	CATG	4 cut(s)	67, 115, 151, 237
CviJI	RGCY	5 cut(s)	106, 215, 353, 396, 448
CviKI_1	RGCY	5 cut(s)	106, 215, 353, 396, 448
CviQI	GTAC	1 cut(s)	201
DdeI	CTNAG	3 cut(s)	47, 196, 392
DpnI	GATC	1 cut(s)	87
DpnII	GATC	1 cut(s)	85
Eam1104I	CTCTTC	1 cut(s)	197
EarI	CTCTTC	1 cut(s)	197
Eco47I	GGWCC	1 cut(s)	347
EcoRII	CCWGG	1 cut(s)	298
FaeI	CATG	4 cut(s)	70, 118, 154, 240
FatI	CATG	4 cut(s)	66, 114, 150, 236
FblI	GTMKAC	1 cut(s)	30
Fnu4HI	GCNGC	2 cut(s)	15, 207
FokI	GGATG	1 cut(s)	178
Fsp4HI	GCNGC	2 cut(s)	15, 207
FspBI	CTAG	3 cut(s)	89, 119, 342
GluI	GCNGC	2 cut(s)	15, 207
GsuI	CTGGAG	1 cut(s)	339
HapII	CCGG	1 cut(s)	397
Hin1II	CATG	4 cut(s)	70, 118, 154, 240
HindIII	AAGCTT	1 cut(s)	213
HinfI	GANTC	2 cut(s)	284, 290
HpaII	CCGG	1 cut(s)	397
Hpy166II	GTNNAC	1 cut(s)	31
Hpy188I	TCNGA	1 cut(s)	289
Hpy188III	TCNNGA	1 cut(s)	318
Hpy8I	GTNNAC	1 cut(s)	31
HpyAV	CCTTC	3 cut(s)	151, 217, 256
HpyCH4III	ACNGT	2 cut(s)	28, 175
HpyCH4IV	ACGT	1 cut(s)	147
HpyCH4V	TGCA	4 cut(s)	17, 308, 410, 428
HpyF10VI	GCNNNNNNNGC	3 cut(s)	103, 212, 367
HpyF3I	CTNAG	3 cut(s)	47, 196, 392
HpySE526I	ACGT	1 cut(s)	147
Hsp92II	CATG	4 cut(s)	70, 118, 154, 240
Kzo9I	GATC	1 cut(s)	85
Lsp1109I	GCAGC	1 cut(s)	218
LweI	GCATC	1 cut(s)	132
MaeI	CTAG	3 cut(s)	89, 119, 342
MaeII	ACGT	1 cut(s)	147
MaeIII	GTNAC	1 cut(s)	169
MalI	GATC	1 cut(s)	87
MboI	GATC	1 cut(s)	85
MboII	GAAGA	4 cut(s)	184, 253, 271, 335
MluCI	AATT	2 cut(s)	37, 429
MlyI	GAGTC	1 cut(s)	299
MmeI	TCCRAC	1 cut(s)	261
MnlI	CCTC	1 cut(s)	304
MseI	TTAA	2 cut(s)	218, 435
MspI	CCGG	1 cut(s)	397
MspR9I	CCNGG	1 cut(s)	300
MvaI	CCWGG	1 cut(s)	300
MwoI	GCNNNNNNNGC	3 cut(s)	103, 212, 367
NdeII	GATC	1 cut(s)	85
NlaIII	CATG	4 cut(s)	70, 118, 154, 240
NlaIV	GGNNCC	1 cut(s)	53
NmuCI	GTSAC	1 cut(s)	169
NspI	RCATGY	1 cut(s)	70
PfeI	GAWTC	1 cut(s)	284
PkrI	GCNGC	2 cut(s)	16, 208
PleI	GAGTC	1 cut(s)	298
PpsI	GAGTC	1 cut(s)	298
Psp6I	CCWGG	1 cut(s)	298
PspGI	CCWGG	1 cut(s)	298
PspN4I	GGNNCC	1 cut(s)	53
PspPI	GGNCC	1 cut(s)	347
PstI	CTGCAG	1 cut(s)	19
RsaI	GTAC	1 cut(s)	202
RsaNI	GTAC	1 cut(s)	201
SaqAI	TTAA	2 cut(s)	218, 435
SatI	GCNGC	2 cut(s)	15, 207
Sau3AI	GATC	1 cut(s)	85
Sau96I	GGNCC	1 cut(s)	347
SchI	GAGTC	1 cut(s)	299
ScrFI	CCNGG	1 cut(s)	300
SetI	ASST	9 cut(s)	22, 150, 202, 217, 301, 343, 355, 375, 450
SfaNI	GCATC	1 cut(s)	132
SfcI	CTRYAG	1 cut(s)	15
SinI	GGWCC	1 cut(s)	347
Sse9I	AATT	2 cut(s)	37, 429
SspMI	CTAG	3 cut(s)	89, 119, 342
StyD4I	CCNGG	1 cut(s)	298
TaaI	ACNGT	2 cut(s)	28, 175
TaiI	ACGT	1 cut(s)	150
TasI	AATT	2 cut(s)	37, 429
TfiI	GAWTC	1 cut(s)	284
Tru1I	TTAA	2 cut(s)	218, 435
Tru9I	TTAA	2 cut(s)	218, 435
TscAI	CASTG	1 cut(s)	66
TseFI	GTSAC	1 cut(s)	169
TseI	GCWGC	2 cut(s)	14, 206
Tsp45I	GTSAC	1 cut(s)	169
TspDTI	ATGAA	3 cut(s)	236, 272, 345
TspRI	CASTG	1 cut(s)	66
VpaK11BI	GGWCC	1 cut(s)	347
XceI	RCATGY	1 cut(s)	70
XmiI	GTMKAC	1 cut(s)	30
XspI	CTAG	3 cut(s)	89, 119, 342

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.