Rh2AG149500

Membrane protein-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0003343
Physical Location & Seq
Reverse (-)
13685565 .. 13686889
1325 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG149500.1

Sequence Viewer

Length: 801 bp
ATGGCTCGAATGATGATCACTCGAAAAACAGTATCAGCAGTAGCACTTATGGGATGGACAGTGTTCATTAGCCTCCTTATGATAAGTGAAGTTGTGAATGCAGAAAGGCCCCTAAAAGATGAGCAGAAGCCAAGAAATTTTGTTGAAGAAGATGTAAAGCAAGGAGTCTTTGTGAGAATGATGAAGCTTCTCTGGCAGACTGGAGGGTCTTCTTATCAACCTGTTTGGCCTGAGATGAAGTTTGGTTGGAAAATTGTAGTGGGAACAATAGTTGGGTTCTTTGGTGCTGCATTGGGTAGTGTTGGAGGTGTTGGTGGTGGAGGAATTTTTGTTCCGATGCTCGCGTTGATCGTTGGTTTCGATCCCAAGTCTTCCACCGCCATTTCCAAGTGTATGATAATGGGAGCTGCAGGCTCAACAGTGTACTTCAATTTGAGACTTAGGCACCCAACACTGGACATGCCCCTTATAGATTATGATCTGGCTTTGCTCTTTCAGCCAATGCTTATGCTAGGAATCAGCATTGGAGTTGCCTTCAACGTCATGTTTGCCGATTGGATGGTCACAGTTCTACTCATCATTCTTTTCCTAGGGACAGCAGCAAAAGCTTTAATGAAAGGCATACAAACATGGAAGAAAGAAACAACGATGAAGAAGGAAGCCGAAAAGCAGTTGGAATCGGAGTCCAAACCCGGTGATGGTTCTGGAGAAGACTACAAACCATTACCTAGCGGTCCAGTTTCATTGCAAGATGACGAAGTGAGTCCAGAAATTCTTGAAAATGACATGTTAATTTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TauE

Protein Analysis

266

Amino Acids

29.18

Weight (kDa)

5.6

Isoelectric Point (pI)

34.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TauE PF01925 90 - 209 4.3e-12 Sulfite exporter TauE/SafE
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 205
AccB1I GGYRCC 1 cut(s) 444
AccII CGCG 1 cut(s) 344
AciI CCGC 2 cut(s) 378, 732
AclWI GGATC 1 cut(s) 356
AcsI RAATTY 3 cut(s) 136, 324, 771
AfaI GTAC 1 cut(s) 425
AfiI CCNNNNNNNGG 2 cut(s) 454, 698
AflIII ACRYGT 1 cut(s) 786
AgsI TTSAA 4 cut(s) 146, 430, 538, 779
AloI GAACNNNNNNTCC 2 cut(s) 315, 347
AluBI AGCT 3 cut(s) 187, 407, 608
AluI AGCT 3 cut(s) 187, 407, 608
Alw26I GTCTC 1 cut(s) 430
AlwI GGATC 1 cut(s) 356
AoxI GGCC 2 cut(s) 107, 227
ApeKI GCWGC 3 cut(s) 287, 407, 599
ApoI RAATTY 3 cut(s) 136, 324, 771
AspA2I CCTAGG 1 cut(s) 589
AspS9I GGNCC 2 cut(s) 108, 734
AsuC2I CCSGG 1 cut(s) 693
AsuHPI GGTGA 1 cut(s) 707
AvaII GGWCC 1 cut(s) 734
AvrII CCTAGG 1 cut(s) 589
BanI GGYRCC 1 cut(s) 444
BbsI GAAGAC 3 cut(s) 201, 363, 717
BbvI GCAGC 3 cut(s) 274, 394, 611
BccI CCATC 3 cut(s) 48, 553, 692
BclI TGATCA 1 cut(s) 15
BcnI CCSGG 1 cut(s) 693
BcoDI GTCTC 1 cut(s) 430
BfaI CTAG 3 cut(s) 512, 590, 729
BfmI CTRYAG 1 cut(s) 408
BisI GCNGC 3 cut(s) 288, 408, 600
BlnI CCTAGG 1 cut(s) 589
BlsI GCNGC 3 cut(s) 289, 409, 601
Bme1390I CCNGG 1 cut(s) 693
Bme18I GGWCC 1 cut(s) 734
BmgT120I GGNCC 2 cut(s) 108, 734
BmiI GGNNCC 2 cut(s) 110, 446
BmrFI CCNGG 1 cut(s) 693
BmsI GCATC 1 cut(s) 327
BpiI GAAGAC 3 cut(s) 201, 363, 717
BpmI CTGGAG 2 cut(s) 222, 726
BpuMI CCSGG 1 cut(s) 693
BsaBI GATNNNNATC 1 cut(s) 477
BsaJI CCNNGG 1 cut(s) 589
BsaXI ACNNNNNCTCC 2 cut(s) 156, 186
Bsc4I CCNNNNNNNGG 2 cut(s) 454, 698
Bse1I ACTGG 3 cut(s) 205, 459, 737
Bse3DI GCAATG 1 cut(s) 743
Bse8I GATNNNNATC 1 cut(s) 477
BseDI CCNNGG 1 cut(s) 589
BseGI GGATG 2 cut(s) 59, 564
BseJI GATNNNNATC 1 cut(s) 477
BseLI CCNNNNNNNGG 2 cut(s) 454, 698
BseMI GCAATG 1 cut(s) 743
BseMII CTCAG 1 cut(s) 222
BseNI ACTGG 3 cut(s) 205, 459, 737
BseXI GCAGC 3 cut(s) 274, 394, 611
Bsh1236I CGCG 1 cut(s) 344
BshFI GGCC 2 cut(s) 109, 229
BshNI GGYRCC 1 cut(s) 444
BsiSI CCGG 1 cut(s) 693
BslFI GGGAC 1 cut(s) 607
BslI CCNNNNNNNGG 2 cut(s) 454, 698
BsmAI GTCTC 1 cut(s) 430
BsmFI GGGAC 1 cut(s) 607
BsmI GAATGC 1 cut(s) 103
BsnI GGCC 2 cut(s) 109, 229
Bsp143I GATC 4 cut(s) 15, 348, 361, 478
BspACI CCGC 2 cut(s) 378, 732
BspANI GGCC 2 cut(s) 109, 229
BspCNI CTCAG 1 cut(s) 223
BspFNI CGCG 1 cut(s) 344
BspLI GGNNCC 2 cut(s) 110, 446
BspMAI CTGCAG 1 cut(s) 412
BspPI GGATC 1 cut(s) 356
BspT107I GGYRCC 1 cut(s) 444
BsrDI GCAATG 1 cut(s) 743
BsrI ACTGG 3 cut(s) 205, 459, 737
BssECI CCNNGG 1 cut(s) 589
BssMI GATC 4 cut(s) 15, 348, 361, 478
BssT1I CCWWGG 1 cut(s) 589
Bst4CI ACNGT 4 cut(s) 31, 61, 421, 568
BstC8I GCNNGC 2 cut(s) 342, 412
BstDEI CTNAG 2 cut(s) 231, 440
BstF5I GGATG 2 cut(s) 59, 564
BstFNI CGCG 1 cut(s) 344
BstKTI GATC 4 cut(s) 18, 351, 364, 481
BstMAI GTCTC 1 cut(s) 430
BstMBI GATC 4 cut(s) 15, 348, 361, 478
BstMWI GCNNNNNNNGC 3 cut(s) 193, 496, 605
BstNSI RCATGY 2 cut(s) 463, 790
BstSCI CCNGG 1 cut(s) 691
BstSFI CTRYAG 1 cut(s) 408
BstUI CGCG 1 cut(s) 344
BstV1I GCAGC 3 cut(s) 274, 394, 611
BstV2I GAAGAC 3 cut(s) 201, 363, 717
BsuRI GGCC 2 cut(s) 109, 229
BtsCI GGATG 2 cut(s) 59, 564
BtsIMutI CAGTG 3 cut(s) 66, 426, 452
Cac8I GCNNGC 2 cut(s) 342, 412
Cfr13I GGNCC 2 cut(s) 108, 734
Csp6I GTAC 1 cut(s) 424
CviAII CATG 4 cut(s) 460, 544, 630, 787
CviQI GTAC 1 cut(s) 424
DdeI CTNAG 2 cut(s) 231, 440
DpnI GATC 4 cut(s) 17, 350, 363, 480
DpnII GATC 4 cut(s) 15, 348, 361, 478
DrdI GACNNNNNNGTC 1 cut(s) 205
DseDI GACNNNNNNGTC 1 cut(s) 205
Eco130I CCWWGG 1 cut(s) 589
Eco47I GGWCC 1 cut(s) 734
EcoO109I RGGNCCY 1 cut(s) 108
EcoT14I CCWWGG 1 cut(s) 589
ErhI CCWWGG 1 cut(s) 589
FaeI CATG 4 cut(s) 463, 547, 633, 790
FaqI GGGAC 1 cut(s) 607
FatI CATG 4 cut(s) 459, 543, 629, 786
FbaI TGATCA 1 cut(s) 15
Fnu4HI GCNGC 3 cut(s) 288, 408, 600
FokI GGATG 2 cut(s) 66, 571
Fsp4HI GCNGC 3 cut(s) 288, 408, 600
FspBI CTAG 3 cut(s) 512, 590, 729
GluI GCNGC 3 cut(s) 288, 408, 600
GsuI CTGGAG 2 cut(s) 222, 726
HaeIII GGCC 2 cut(s) 109, 229
HapII CCGG 1 cut(s) 693
Hin1II CATG 4 cut(s) 463, 547, 633, 790
HindIII AAGCTT 2 cut(s) 185, 606
HinfI GANTC 5 cut(s) 165, 516, 677, 683, 763
HpaII CCGG 1 cut(s) 693
HphI GGTGA 1 cut(s) 707
Hpy166II GTNNAC 1 cut(s) 424
Hpy188I TCNGA 2 cut(s) 336, 682
Hpy188III TCNNGA 3 cut(s) 705, 767, 776
Hpy8I GTNNAC 1 cut(s) 424
HpyAV CCTTC 2 cut(s) 544, 649
HpyCH4III ACNGT 4 cut(s) 31, 61, 421, 568
HpyCH4IV ACGT 1 cut(s) 540
HpyCH4V TGCA 4 cut(s) 101, 290, 410, 748
HpyF10VI GCNNNNNNNGC 3 cut(s) 193, 496, 605
HpyF3I CTNAG 2 cut(s) 231, 440
HpySE526I ACGT 1 cut(s) 540
Hsp92II CATG 4 cut(s) 463, 547, 633, 790
Ksp22I TGATCA 1 cut(s) 15
Kzo9I GATC 4 cut(s) 15, 348, 361, 478
LmnI GCTCC 1 cut(s) 404
Lsp1109I GCAGC 3 cut(s) 274, 394, 611
LweI GCATC 1 cut(s) 327
MaeI CTAG 3 cut(s) 512, 590, 729
MaeII ACGT 1 cut(s) 540
MaeIII GTNAC 1 cut(s) 562
MalI GATC 4 cut(s) 17, 350, 363, 480
MboI GATC 4 cut(s) 15, 348, 361, 478
MboII GAAGA 7 cut(s) 158, 161, 201, 363, 646, 664, 722
MluCI AATT 6 cut(s) 136, 252, 324, 430, 771, 792
MlyI GAGTC 3 cut(s) 174, 692, 772
MmeI TCCRAC 3 cut(s) 227, 283, 654
MnlI CCTC 4 cut(s) 83, 197, 299, 314
MseI TTAA 2 cut(s) 611, 791
MspI CCGG 1 cut(s) 693
MspR9I CCNGG 1 cut(s) 693
Mva1269I GAATGC 1 cut(s) 103
MvnI CGCG 1 cut(s) 344
MwoI GCNNNNNNNGC 3 cut(s) 193, 496, 605
NciI CCSGG 1 cut(s) 693
NdeII GATC 4 cut(s) 15, 348, 361, 478
NlaIII CATG 4 cut(s) 463, 547, 633, 790
NlaIV GGNNCC 2 cut(s) 110, 446
NmuCI GTSAC 1 cut(s) 562
NspI RCATGY 2 cut(s) 463, 790
PciI ACATGT 1 cut(s) 786
PcsI WCGNNNNNNNCGW 2 cut(s) 348, 357
PctI GAATGC 1 cut(s) 103
PfeI GAWTC 2 cut(s) 516, 677
PkrI GCNGC 3 cut(s) 289, 409, 601
PleI GAGTC 3 cut(s) 173, 691, 771
PpsI GAGTC 3 cut(s) 173, 691, 771
PscI ACATGT 1 cut(s) 786
PspN4I GGNNCC 2 cut(s) 110, 446
PspPI GGNCC 2 cut(s) 108, 734
PstI CTGCAG 1 cut(s) 412
RsaI GTAC 1 cut(s) 425
RsaNI GTAC 1 cut(s) 424
SaqAI TTAA 2 cut(s) 611, 791
SatI GCNGC 3 cut(s) 288, 408, 600
Sau3AI GATC 4 cut(s) 15, 348, 361, 478
Sau96I GGNCC 2 cut(s) 108, 734
SchI GAGTC 3 cut(s) 174, 692, 772
ScrFI CCNGG 1 cut(s) 693
SetI ASST 7 cut(s) 189, 223, 310, 409, 543, 610, 730
SfaNI GCATC 1 cut(s) 327
SfcI CTRYAG 1 cut(s) 408
SinI GGWCC 1 cut(s) 734
Sse9I AATT 6 cut(s) 136, 252, 324, 430, 771, 792
SsiI CCGC 2 cut(s) 378, 732
SspMI CTAG 3 cut(s) 512, 590, 729
StyD4I CCNGG 1 cut(s) 691
StyI CCWWGG 1 cut(s) 589
TaaI ACNGT 4 cut(s) 31, 61, 421, 568
TaiI ACGT 1 cut(s) 543
TaqI TCGA 3 cut(s) 7, 22, 360
TasI AATT 6 cut(s) 136, 252, 324, 430, 771, 792
TatI WGTACW 1 cut(s) 423
TfiI GAWTC 2 cut(s) 516, 677
Tru1I TTAA 2 cut(s) 611, 791
Tru9I TTAA 2 cut(s) 611, 791
TscAI CASTG 3 cut(s) 66, 426, 459
TseFI GTSAC 1 cut(s) 562
TseI GCWGC 3 cut(s) 287, 407, 599
Tsp45I GTSAC 1 cut(s) 562
TspDTI ATGAA 6 cut(s) 55, 197, 251, 629, 665, 732
TspRI CASTG 3 cut(s) 66, 426, 459
VpaK11BI GGWCC 1 cut(s) 734
XapI RAATTY 3 cut(s) 136, 324, 771
XceI RCATGY 2 cut(s) 463, 790
XmaJI CCTAGG 1 cut(s) 589
XspI CTAG 3 cut(s) 512, 590, 729
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.