Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0002238

Physical Location & Seq

Genomic Coordinates Reverse (-)

7522568 .. 7533576

Gene Structure 11009 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g13660.t8

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2910 bp

ATGTCTATGACTCTGAATTTTCTCGGAGGAGCACCTTTTCAACTGCTCTACGATGGGGTTAAGTTGGCCATGAACAATACTAGTAAGTTTAAAACCCACCTCAGGAGTCTGAAATTCACTCTGGATTGTTTGCAGCCACAGATCATAGAACAGATTAGATTGCAGAACCTACAGCTGAATATCCCCGTCCAAGAAATACAAGAGCTTCAGAGGAAAATTGATGAAGGCATAGTGCTCGTTGGCCGGTTATCGAGCATCAACACTAGTAACATCCGCGTCTGGGGAAGTTGCTGCAACTGCTTGATGGTTAGCTACGCAGACCAGCTTGATGAGTTGGATGAGTCTCTCAGACGTCTGCTGGAAATACTGAGGTTGCAGTCGTTAGCTCAAGTCAACCAGATCGGGATTTTGGCAAGGACAGCCAGGGATAGACAAGATGAATTGGGGAGAAGACAGCTGGAGATTCTTAGCAACCAGCGACATATTATGGATACATTGATGAAGCAGCAGCAAATAATAGAGAGGATTGAAAAGAATAGTGTTGCAGCGTCAACCGGAAAAGGAGCTCCTCCTGTTCAGGTGTTGCGCCTTGGAGCAGTATTTCAGGCACTGTTTGATGCTGTTGTACAAGTAAAAGGCAAAAATTCCAAGTTCAAACGACTCCTGGAAGATTTCAAGTTCACACTGGATTGCTTGAAACCACTGGTACAAGAGATAGTAGAATGTAACAAGGTATTGCATTTTCCAAAAGAGGAAATCTTGGAGGATTTCATAGTATACTTGGAGAAAGGTGTAGAGCTCGTTTACAAATGTTCCAAGAGTTCTCTGTGGAACAGGTTCAAAAGGTACGAGTACATCAACAGTCTTTTTGAACTAGATGAATCTCTTCAGAGGCTGTTCAATATACTGAGATTGCAGATAGAAACTGATGTGAAGGAGGCCTTGGTTTCTGTAAGCAAGTTAGAAAAGGAGATCGAGGAAATTGAAGGTAGTTTTGTGCTACAGCATCATCAATATGAAAGTGCTGCAGCTGAACCTCAATTGCCAAAAGTTGAAGTGGATGTAATGAACATGCAAGTCACAAGGGATGTGATGGAGTCTATGGATTCAACGGGGAATGTAGAGGTGGGAGATGAAAGTCACATGCGAACTGAAGGGAGTAGTCTGGCATCCCATCAAATTGATGTTGCTGTAGAGGAGGAGGAGGAGCATGAGGAGGAGAGGGAGCCTCTATCACCTACAATATTAGCTGGGATCACAGAATTATTTGATTCGGCACTGGCAAGAAGTAACATGGAGGTGGGAGACGAGCAAACCGTTGGGCAAGGGGAAGAGGATAAAGAAATATGGCAACTCACGTGTAAAGAAGCAGATAAGGAAACCACAACACCTACAGTTCCTCTTTTGGCTGCTCACAAAAGGCAAGCGTCTGTAGAAACTGTTGTGAAAAATTATGAAGAACACTATGCTGCTATGCACATTCAAGTAGCTTTTAGGAGATACTTGGACCGCAAAAGCCTGCGGAGACCTACAGTTCCTCTTTTGGCTGCTCACAAAAGGCGAGCGTCTGTAGAAACTGTTGTGAAAAATTATGAAGAACACTATGCTGCTACGTGCATTCAAGTAGCTTTTAGGAGATACTTGGACCGCAAAAGCCTGCGGAGACCTACAGTTCCTTTTTTGGCTGCTCACAAAAGGCGAGCGTCTGTAGAAACTGTTGTGAAAAATTATGAAGAACACTATGCTGCTACGCGCATTCAAGTAGCTTTTAGGAGATACTTGGACCGCAAAAGCCTGAGGAGACTAGTAGTTCTGCAAAATGCTATCCAAACCAAATCCCAGTACACAGCCCTATTCAGCTCTTATGAGGCAGCCTGTAAGCTCGATTCGGGTTTACATTCGTTTGATTTATCTCTCCAACAGCGCACTAGCCGAGTCTTCAACTCACTTTCCACTAGAGCTAAAGTGAGGTCCTTATCATTAAACTCACTCAAAGAGGTCTCTGATTGGTTGCTTGAGACAAACCAGGAAGTGGTCAAGGTAATTCTGGAATGCAAAAAGGATATATGGAACAATCAAGAGATTTTCTCTCTAGTGGAGGAGTATTTTGAGAACAGTTTCCATACATTGGAATTTTGTACTGCCCTAGAGACATGTCTCAAGCGTGTAGTGAACAATCAGCTCATTATTCAGGCTGCGGTGAGTCGGTTTGAGGAAGAAGTGGAAGCTGGTCTTGAAGGGAAGGGGTGTGTGAAGATATTGCAGGAGTTGAGAGCATTTAAGGCAGCCGGGGATCCTTTCAGGGAGGAATTTTTATCACTATTTCGGGCAGTTTTAAACGGACATGCATCTATGTTGCAGATATTGCAAGTCCGAAAGAAAAGGCTGGATAAGAAGTTAAAATCAGTGAAAGCTTGGCGGAAAGTGTCAAATGTTCTTATTGTTGCCACTTTTGTGTCTGTATTGATATTTTCAGTGGTGGCGGCTGCCATTACTGCACCACCACTTGTAACCTCCTTGGCACGTGCACTGGCTGTTTCCGTAGGTTCTTCGGAAAAATGGTGTAAAATTCTTTGGAGCTACTACCACACTCTGAATGCGCAGAGAATCGAAATAAACTCAATGCAGCTTGGAACTATGGACTGTATGTTTACAATGACGGACTTGAACAACATCAGGGTGCTTGTTGAGAAATGTGAAAGTGAGATTGAGGCACTGCTGCAGACTGCTGACTTTGGTATTACAGAAGAGAATGCTGTTAAGATAGTAATGATTGAGATCAACAAAAAGCTGGAAATGTTTATGGAAACTGTCAAAAGTTTAAGCCAAAATGCTGATGAGTGTGGCCGGAATATAAGGAGGGCAAGGACAGTGATTTTGCAAAGAATAATTAGTCATCCCATAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF677

Protein Analysis

970

Amino Acids

110.88

Weight (kDa)

6.88

Isoelectric Point (pI)

57.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RPW8	PF05659	3 - 99	1e-05	Arabidopsis broad-spectrum mildew resistance protein RPW8
RPW8	PF05659	174 - 303	2e-23	Arabidopsis broad-spectrum mildew resistance protein RPW8
DUF677	PF05055	609 - 940	6.5e-102	Protein of unknown function (DUF677)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002238)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G18630 AT2G18630
fragaria_vesca	FvH4_1g13660 FvH4_1g13660 FvH4_1g13660 FvH4_1g13660 FvH4_1g13660 FvH4_1g13660 FvH4_1g13660 FvH4_1g13660 FvH4_1g13660 FvH4_1g13670 FvH4_1g14080 FvH4_1g14080 FvH4_1g14080 FvH4_1g14080 FvH4_1g14080 FvH4_1g14080 FvH4_1g14080
malus_domestica	MD02G1154800.v1.1 MD11G1180100.v1.1 MD15G1269200.v1.1
prunus_persica	Prupe.7G148500_v2.0.a1
pyrus_communis	pycom02g15720
rosa_chinensis	RchiOBHm_Chr2g0102731 RchiOBHm_Chr2g0102741
rosa_laevigata	RLG00000017176
rosa_multiflora	Rmu_co8294297.1_g000001 Rmu_sc0006537.1_g000037 Rmu_sc0006537.1_g000040
rosa_roxburghii	Rroxscaffold_2G00140350 Rroxscaffold_2G00140360
rosa_rugosa	Rorug02G0109300 Rorug02G0109300
rosa_samantha	Rh2AG157500 Rh2AG157600 Rh2BG164000 Rh2BG164100 Rh2CG163700 Rh2CG163800 Rh2DG162800 Rh2DG162900
rosa_wichuraiana	Rw2G012220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	355
Acc16I	TGCGCA	1 cut(s)	2601
AccB7I	CCANNNNNTGG	2 cut(s)	2032, 2128
AccI	GTMKAC	1 cut(s)	777
AccII	CGCG	2 cut(s)	276, 1753
AciI	CCGC	9 cut(s)	274, 1510, 1522, 1648, 1660, 1786, 2198, 2419, 2483
AclWI	GGATC	3 cut(s)	1262, 2288, 2301
AcoI	YGGCCR	3 cut(s)	66, 241, 2845
AcsI	RAATTY	6 cut(s)	16, 113, 643, 2132, 2309, 2568
AcuI	CTGAAG	3 cut(s)	191, 872, 1173
AcvI	CACGTG	2 cut(s)	1359, 2525
AcyI	GRCGYC	1 cut(s)	352
AfaI	GTAC	6 cut(s)	627, 708, 848, 854, 1844, 2140
AfiI	CCNNNNNNNGG	4 cut(s)	102, 280, 2032, 2128
AflIII	ACRYGT	2 cut(s)	1358, 2153
AhlI	ACTAGT	3 cut(s)	80, 263, 1804
AjnI	CCWGG	3 cut(s)	422, 663, 2025
AjuI	GAANNNNNNNTTGG	2 cut(s)	926, 958
AleI	CACNNNNGTG	1 cut(s)	2453
Alw21I	GWGCWC	5 cut(s)	34, 237, 568, 801, 2530
Alw26I	GTCTC	9 cut(s)	348, 1299, 1519, 1657, 1795, 2005, 2012, 2144, 2162
Alw44I	GTGCAC	1 cut(s)	2526
AlwI	GGATC	3 cut(s)	1262, 2288, 2301
AlwNI	CAGNNNCTG	2 cut(s)	610, 895
AoxI	GGCC	4 cut(s)	66, 241, 939, 2845
ApaLI	GTGCAC	1 cut(s)	2526
ApoI	RAATTY	6 cut(s)	16, 113, 643, 2132, 2309, 2568
ArsI	GACNNNNNNTTYG	2 cut(s)	2860, 2892
Asp700I	GAANNNNTTC	3 cut(s)	836, 885, 2117
AspLEI	GCGC	4 cut(s)	588, 1755, 1926, 2602
AspS9I	GGNCC	4 cut(s)	1507, 1645, 1783, 1971
AsuC2I	CCSGG	1 cut(s)	2290
AsuHPI	GGTGA	2 cut(s)	1227, 2212
AvaII	GGWCC	4 cut(s)	1507, 1645, 1783, 1971
AxyI	CCTNAGG	2 cut(s)	101, 1796
BaeGI	GKGCMC	1 cut(s)	2530
BalI	TGGCCA	1 cut(s)	68
BamHI	GGATCC	1 cut(s)	2293
BanII	GRGCYC	2 cut(s)	568, 801
BbrPI	CACGTG	2 cut(s)	1359, 2525
BbsI	GAAGAC	2 cut(s)	457, 1930
Bbv12I	GWGCWC	5 cut(s)	34, 237, 568, 801, 2530
BccI	CCATC	4 cut(s)	47, 298, 1087, 1182
BcgI	CGANNNNNNTGC	2 cut(s)	217, 251
BciT130I	CCWGG	3 cut(s)	424, 665, 2027
BciVI	GTATCC	1 cut(s)	484
BcnI	CCSGG	1 cut(s)	2290
BcoDI	GTCTC	9 cut(s)	348, 1299, 1519, 1657, 1795, 2005, 2012, 2144, 2162
BcuI	ACTAGT	3 cut(s)	80, 263, 1804
BfaI	CTAG	8 cut(s)	81, 264, 875, 1805, 1929, 1956, 2093, 2147
BfuI	GTATCC	1 cut(s)	484
Bme1390I	CCNGG	4 cut(s)	424, 665, 2027, 2290
Bme18I	GGWCC	4 cut(s)	1507, 1645, 1783, 1971
BmgT120I	GGNCC	4 cut(s)	1507, 1645, 1783, 1971
BmiI	GGNNCC	2 cut(s)	1227, 2295
BmrFI	CCNGG	4 cut(s)	424, 665, 2027, 2290
BmrI	ACTGGG	1 cut(s)	1834
BmsI	GCATC	5 cut(s)	264, 607, 1015, 1178, 2357
BmuI	ACTGGG	1 cut(s)	1834
BpiI	GAAGAC	2 cut(s)	457, 1930
BplI	GAGNNNNNCTC	4 cut(s)	1213, 1245, 2072, 2104
BpmI	CTGGAG	1 cut(s)	479
BpuEI	CTTGAG	3 cut(s)	372, 2036, 2144
BpuMI	CCSGG	1 cut(s)	2290
BsaAI	YACGTR	3 cut(s)	1359, 1614, 2525
BsaBI	GATNNNNATC	1 cut(s)	2777
BsaHI	GRCGYC	1 cut(s)	352
BsaI	GGTCTC	3 cut(s)	1519, 1657, 2005
BsaJI	CCNNGG	5 cut(s)	423, 589, 942, 2289, 2517
BsaWI	WCCGGW	1 cut(s)	554
Bsc4I	CCNNNNNNNGG	4 cut(s)	102, 280, 2032, 2128
Bse118I	RCCGGY	1 cut(s)	243
Bse1I	ACTGG	5 cut(s)	690, 708, 1284, 1840, 2535
Bse21I	CCTNAGG	2 cut(s)	101, 1796
Bse8I	GATNNNNATC	1 cut(s)	2777
BseBI	CCWGG	3 cut(s)	424, 665, 2027
BseDI	CCNNGG	5 cut(s)	423, 589, 942, 2289, 2517
BseGI	GGATG	6 cut(s)	270, 343, 1066, 1093, 1169, 2896
BseJI	GATNNNNATC	1 cut(s)	2777
BseLI	CCNNNNNNNGG	4 cut(s)	102, 280, 2032, 2128
BseMII	CTCAG	5 cut(s)	115, 359, 361, 899, 1787
BseNI	ACTGG	5 cut(s)	690, 708, 1284, 1840, 2535
BseSI	GKGCMC	1 cut(s)	2530
BseYI	CCCAGC	1 cut(s)	1250
BsgI	GTGCAG	1 cut(s)	2481
Bsh1236I	CGCG	2 cut(s)	276, 1753
BshFI	GGCC	4 cut(s)	68, 243, 941, 2847
BsiHKAI	GWGCWC	5 cut(s)	34, 237, 568, 801, 2530
BsiSI	CCGG	4 cut(s)	244, 555, 2289, 2848
BslI	CCNNNNNNNGG	4 cut(s)	102, 280, 2032, 2128
BsmAI	GTCTC	9 cut(s)	348, 1299, 1519, 1657, 1795, 2005, 2012, 2144, 2162
BsmBI	CGTCTC	1 cut(s)	1299
BsmI	GAATGC	5 cut(s)	1617, 1755, 2057, 2602, 2758
BsnI	GGCC	4 cut(s)	68, 243, 941, 2847
Bso31I	GGTCTC	3 cut(s)	1519, 1657, 2005
Bsp1286I	GDGCHC	5 cut(s)	34, 237, 568, 801, 2530
Bsp1407I	TGTACA	1 cut(s)	625
Bsp143I	GATC	6 cut(s)	141, 399, 972, 1254, 2293, 2778
BspACI	CCGC	9 cut(s)	274, 1510, 1522, 1648, 1660, 1786, 2198, 2419, 2483
BspANI	GGCC	4 cut(s)	68, 243, 941, 2847
BspCNI	CTCAG	5 cut(s)	114, 360, 360, 900, 1788
BspFNI	CGCG	2 cut(s)	276, 1753
BspLI	GGNNCC	2 cut(s)	1227, 2295
BspMAI	CTGCAG	2 cut(s)	1030, 2724
BspPI	GGATC	3 cut(s)	1262, 2288, 2301
BspTNI	GGTCTC	3 cut(s)	1519, 1657, 2005
BsrFI	RCCGGY	1 cut(s)	243
BsrGI	TGTACA	1 cut(s)	625
BsrI	ACTGG	5 cut(s)	690, 708, 1284, 1840, 2535
BssAI	RCCGGY	1 cut(s)	243
BssECI	CCNNGG	5 cut(s)	423, 589, 942, 2289, 2517
BssMI	GATC	6 cut(s)	141, 399, 972, 1254, 2293, 2778
BssNAI	GTATAC	1 cut(s)	778
BssNI	GRCGYC	1 cut(s)	352
BssT1I	CCWWGG	3 cut(s)	589, 942, 2517
Bst1107I	GTATAC	1 cut(s)	778
Bst2UI	CCWGG	3 cut(s)	424, 665, 2027
Bst6I	CTCTTC	3 cut(s)	891, 1326, 2742
BstACI	GRCGYC	1 cut(s)	352
BstAPI	GCANNNNNTGC	1 cut(s)	2365
BstAUI	TGTACA	1 cut(s)	625
BstBAI	YACGTR	3 cut(s)	1359, 1614, 2525
BstC8I	GCNNGC	5 cut(s)	1425, 1520, 1563, 1658, 1701
BstDEI	CTNAG	6 cut(s)	101, 347, 368, 467, 908, 1796
BstF5I	GGATG	6 cut(s)	270, 343, 1066, 1093, 1169, 2896
BstFNI	CGCG	2 cut(s)	276, 1753
BstHHI	GCGC	4 cut(s)	588, 1755, 1926, 2602
BstKTI	GATC	6 cut(s)	144, 402, 975, 1257, 2296, 2781
BstMAI	GTCTC	9 cut(s)	348, 1299, 1519, 1657, 1795, 2005, 2012, 2144, 2162
BstMBI	GATC	6 cut(s)	141, 399, 972, 1254, 2293, 2778
BstMWI	GCNNNNNNNGC	5 cut(s)	297, 419, 2282, 2365, 2495
BstNI	CCWGG	3 cut(s)	424, 665, 2027
BstNSI	RCATGY	4 cut(s)	1075, 1147, 2157, 2348
BstSCI	CCNGG	4 cut(s)	422, 663, 2025, 2288
BstSLI	GKGCMC	1 cut(s)	2530
BstUI	CGCG	2 cut(s)	276, 1753
BstV2I	GAAGAC	2 cut(s)	457, 1930
BstX2I	RGATCY	1 cut(s)	2293
BstYI	RGATCY	1 cut(s)	2293
BstZ17I	GTATAC	1 cut(s)	778
Bsu36I	CCTNAGG	2 cut(s)	101, 1796
BsuI	GTATCC	1 cut(s)	484
BsuRI	GGCC	4 cut(s)	68, 243, 941, 2847
BtsCI	GGATG	6 cut(s)	270, 343, 1066, 1093, 1169, 2896
BtsI	GCAGTG	1 cut(s)	2714
BtsIMutI	CAGTG	9 cut(s)	608, 683, 701, 1277, 2412, 2481, 2528, 2714, 2877
Cac8I	GCNNGC	5 cut(s)	1425, 1520, 1563, 1658, 1701
CaiI	CAGNNNCTG	2 cut(s)	610, 895
CfoI	GCGC	4 cut(s)	588, 1755, 1926, 2602
Cfr10I	RCCGGY	1 cut(s)	243
Cfr13I	GGNCC	4 cut(s)	1507, 1645, 1783, 1971
CseI	GACGC	5 cut(s)	265, 537, 1416, 1554, 1692
Csp6I	GTAC	6 cut(s)	626, 707, 847, 853, 1843, 2139
CviAII	CATG	7 cut(s)	70, 1072, 1144, 1211, 1294, 2154, 2345
CviQI	GTAC	6 cut(s)	626, 707, 847, 853, 1843, 2139
DdeI	CTNAG	6 cut(s)	101, 347, 368, 467, 908, 1796
DpnI	GATC	6 cut(s)	143, 401, 974, 1256, 2295, 2780
DpnII	GATC	6 cut(s)	141, 399, 972, 1254, 2293, 2778
DraI	TTTAAA	2 cut(s)	91, 2337
EaeI	YGGCCR	3 cut(s)	66, 241, 2845
Eam1104I	CTCTTC	3 cut(s)	891, 1326, 2742
EarI	CTCTTC	3 cut(s)	891, 1326, 2742
EciI	GGCGGA	1 cut(s)	2434
Ecl136II	GAGCTC	2 cut(s)	566, 799
Eco130I	CCWWGG	3 cut(s)	589, 942, 2517
Eco147I	AGGCCT	1 cut(s)	941
Eco24I	GRGCYC	2 cut(s)	568, 801
Eco31I	GGTCTC	3 cut(s)	1519, 1657, 2005
Eco47I	GGWCC	4 cut(s)	1507, 1645, 1783, 1971
Eco53kI	GAGCTC	2 cut(s)	566, 799
Eco57I	CTGAAG	3 cut(s)	191, 872, 1173
Eco72I	CACGTG	2 cut(s)	1359, 2525
Eco81I	CCTNAGG	2 cut(s)	101, 1796
EcoICRI	GAGCTC	2 cut(s)	566, 799
EcoO109I	RGGNCCY	1 cut(s)	1971
EcoRII	CCWGG	3 cut(s)	422, 663, 2025
EcoT14I	CCWWGG	3 cut(s)	589, 942, 2517
EcoT22I	ATGCAT	1 cut(s)	2350
EcoT38I	GRGCYC	2 cut(s)	568, 801
ErhI	CCWWGG	3 cut(s)	589, 942, 2517
Esp3I	CGTCTC	1 cut(s)	1299
FaeI	CATG	7 cut(s)	73, 1075, 1147, 1214, 1297, 2157, 2348
FalI	AAGNNNNNCTT	4 cut(s)	926, 958, 2217, 2249
FatI	CATG	7 cut(s)	69, 1071, 1143, 1210, 1293, 2153, 2344
FblI	GTMKAC	1 cut(s)	777
FokI	GGATG	6 cut(s)	257, 350, 1073, 1100, 1156, 2883
FriOI	GRGCYC	2 cut(s)	568, 801
FspBI	CTAG	8 cut(s)	81, 264, 875, 1805, 1929, 1956, 2093, 2147
FspI	TGCGCA	1 cut(s)	2601
GlaI	GCGC	4 cut(s)	587, 1754, 1925, 2601
GsaI	CCCAGC	1 cut(s)	1254
GsuI	CTGGAG	1 cut(s)	479
HaeIII	GGCC	4 cut(s)	68, 243, 941, 2847
HapII	CCGG	4 cut(s)	244, 555, 2289, 2848
HgaI	GACGC	5 cut(s)	265, 537, 1416, 1554, 1692
HhaI	GCGC	4 cut(s)	588, 1755, 1926, 2602
Hin1I	GRCGYC	1 cut(s)	352
Hin1II	CATG	7 cut(s)	73, 1075, 1147, 1214, 1297, 2157, 2348
Hin6I	GCGC	4 cut(s)	586, 1753, 1924, 2600
HinP1I	GCGC	4 cut(s)	586, 1753, 1924, 2600
HincII	GTYRAC	2 cut(s)	394, 552
HindII	GTYRAC	2 cut(s)	394, 552
HindIII	AAGCTT	1 cut(s)	2412
HpaII	CCGG	4 cut(s)	244, 555, 2289, 2848
HphI	GGTGA	2 cut(s)	1227, 2212
Hpy188III	TCNNGA	6 cut(s)	103, 122, 403, 2048, 2078, 2234
HpyAV	CCTTC	6 cut(s)	218, 928, 980, 1148, 2231, 2236
HpyCH4IV	ACGT	4 cut(s)	352, 1358, 1613, 2524
HpyF10VI	GCNNNNNNNGC	5 cut(s)	297, 419, 2282, 2365, 2495
HpyF3I	CTNAG	6 cut(s)	101, 347, 368, 467, 908, 1796
HpySE526I	ACGT	4 cut(s)	352, 1358, 1613, 2524
Hsp92I	GRCGYC	1 cut(s)	352
Hsp92II	CATG	7 cut(s)	73, 1075, 1147, 1214, 1297, 2157, 2348
HspAI	GCGC	4 cut(s)	586, 1753, 1924, 2600
Kzo9I	GATC	6 cut(s)	141, 399, 972, 1254, 2293, 2778
LmnI	GCTCC	7 cut(s)	29, 563, 571, 593, 1207, 1225, 2577
LweI	GCATC	5 cut(s)	264, 607, 1015, 1178, 2357
MaeI	CTAG	8 cut(s)	81, 264, 875, 1805, 1929, 1956, 2093, 2147
MaeII	ACGT	4 cut(s)	352, 1358, 1613, 2524
MaeIII	GTNAC	6 cut(s)	266, 725, 1078, 1139, 1289, 2509
MalI	GATC	6 cut(s)	143, 401, 974, 1256, 2295, 2780
MboI	GATC	6 cut(s)	141, 399, 972, 1254, 2293, 2778
MfeI	CAATTG	1 cut(s)	1040
MflI	RGATCY	1 cut(s)	2293
MhlI	GDGCHC	5 cut(s)	34, 237, 568, 801, 2530
MlsI	TGGCCA	1 cut(s)	68
MluNI	TGGCCA	1 cut(s)	68
MlyI	GAGTC	7 cut(s)	4, 115, 350, 654, 1106, 1944, 2212
MmeI	TCCRAC	2 cut(s)	315, 1942
Mox20I	TGGCCA	1 cut(s)	68
Mph1103I	ATGCAT	1 cut(s)	2350
MroXI	GAANNNNTTC	3 cut(s)	836, 885, 2117
MscI	TGGCCA	1 cut(s)	68
MseI	TTAA	8 cut(s)	60, 90, 1982, 2280, 2336, 2399, 2760, 2822
MslI	CAYNNNNRTG	4 cut(s)	1014, 1298, 2453, 2678
Msp20I	TGGCCA	1 cut(s)	68
MspA1I	CMGCKG	3 cut(s)	175, 457, 1031
MspI	CCGG	4 cut(s)	244, 555, 2289, 2848
MspR9I	CCNGG	4 cut(s)	424, 665, 2027, 2290
MunI	CAATTG	1 cut(s)	1040
Mva1269I	GAATGC	5 cut(s)	1617, 1755, 2057, 2602, 2758
MvaI	CCWGG	3 cut(s)	424, 665, 2027
MvnI	CGCG	2 cut(s)	276, 1753
MwoI	GCNNNNNNNGC	5 cut(s)	297, 419, 2282, 2365, 2495
NciI	CCSGG	1 cut(s)	2290
NdeII	GATC	6 cut(s)	141, 399, 972, 1254, 2293, 2778
NlaIII	CATG	7 cut(s)	73, 1075, 1147, 1214, 1297, 2157, 2348
NlaIV	GGNNCC	2 cut(s)	1227, 2295
NmeAIII	GCCGAG	1 cut(s)	1958
NmuCI	GTSAC	2 cut(s)	1078, 1139
NsbI	TGCGCA	1 cut(s)	2601
NsiI	ATGCAT	1 cut(s)	2350
NspI	RCATGY	4 cut(s)	1075, 1147, 2157, 2348
OliI	CACNNNNGTG	1 cut(s)	2453
PceI	AGGCCT	1 cut(s)	941
PciI	ACATGT	1 cut(s)	2153
PcsI	WCGNNNNNNNCGW	1 cut(s)	1314
PctI	GAATGC	5 cut(s)	1617, 1755, 2057, 2602, 2758
PdmI	GAANNNNTTC	3 cut(s)	836, 885, 2117
PfeI	GAWTC	6 cut(s)	463, 881, 1106, 1271, 1886, 2607
PflMI	CCANNNNNTGG	2 cut(s)	2032, 2128
PfoI	TCCNGGA	1 cut(s)	663
PleI	GAGTC	7 cut(s)	4, 114, 349, 654, 1105, 1943, 2211
PmaCI	CACGTG	2 cut(s)	1359, 2525
PmlI	CACGTG	2 cut(s)	1359, 2525
PpsI	GAGTC	7 cut(s)	4, 114, 349, 654, 1105, 1943, 2211
Ppu21I	YACGTR	3 cut(s)	1359, 1614, 2525
PpuMI	RGGWCCY	1 cut(s)	1971
PscI	ACATGT	1 cut(s)	2153
Psp124BI	GAGCTC	2 cut(s)	568, 801
Psp5II	RGGWCCY	1 cut(s)	1971
Psp6I	CCWGG	3 cut(s)	422, 663, 2025
PspCI	CACGTG	2 cut(s)	1359, 2525
PspFI	CCCAGC	1 cut(s)	1250
PspGI	CCWGG	3 cut(s)	422, 663, 2025
PspN4I	GGNNCC	2 cut(s)	1227, 2295
PspPI	GGNCC	4 cut(s)	1507, 1645, 1783, 1971
PspPPI	RGGWCCY	1 cut(s)	1971
PstI	CTGCAG	2 cut(s)	1030, 2724
PstNI	CAGNNNCTG	2 cut(s)	610, 895
PsuI	RGATCY	1 cut(s)	2293
PvuII	CAGCTG	3 cut(s)	175, 457, 1031
RsaI	GTAC	6 cut(s)	627, 708, 848, 854, 1844, 2140
RsaNI	GTAC	6 cut(s)	626, 707, 847, 853, 1843, 2139
RseI	CAYNNNNRTG	4 cut(s)	1014, 1298, 2453, 2678
SacI	GAGCTC	2 cut(s)	568, 801
SaqAI	TTAA	8 cut(s)	60, 90, 1982, 2280, 2336, 2399, 2760, 2822
Sau3AI	GATC	6 cut(s)	141, 399, 972, 1254, 2293, 2778
Sau96I	GGNCC	4 cut(s)	1507, 1645, 1783, 1971
SchI	GAGTC	7 cut(s)	4, 115, 350, 654, 1106, 1944, 2212
ScrFI	CCNGG	4 cut(s)	424, 665, 2027, 2290
SduI	GDGCHC	5 cut(s)	34, 237, 568, 801, 2530
SfaNI	GCATC	5 cut(s)	264, 607, 1015, 1178, 2357
SinI	GGWCC	4 cut(s)	1507, 1645, 1783, 1971
SmiMI	CAYNNNNRTG	4 cut(s)	1014, 1298, 2453, 2678
SmlI	CTYRAG	3 cut(s)	387, 2015, 2159
SmoI	CTYRAG	3 cut(s)	387, 2015, 2159
SpeI	ACTAGT	3 cut(s)	80, 263, 1804
SseBI	AGGCCT	1 cut(s)	941
SsiI	CCGC	9 cut(s)	274, 1510, 1522, 1648, 1660, 1786, 2198, 2419, 2483
SspI	AATATT	1 cut(s)	1245
SspMI	CTAG	8 cut(s)	81, 264, 875, 1805, 1929, 1956, 2093, 2147
SstI	GAGCTC	2 cut(s)	568, 801
StuI	AGGCCT	1 cut(s)	941
StyD4I	CCNGG	4 cut(s)	422, 663, 2025, 2288
StyI	CCWWGG	3 cut(s)	589, 942, 2517
TaiI	ACGT	4 cut(s)	355, 1361, 1616, 2527
TaqI	TCGA	4 cut(s)	251, 975, 1884, 2610
TatI	WGTACW	4 cut(s)	625, 852, 1842, 2138
TauI	GCSGC	1 cut(s)	2486
TfiI	GAWTC	6 cut(s)	463, 881, 1106, 1271, 1886, 2607
Tru1I	TTAA	8 cut(s)	60, 90, 1982, 2280, 2336, 2399, 2760, 2822
Tru9I	TTAA	8 cut(s)	60, 90, 1982, 2280, 2336, 2399, 2760, 2822
TscAI	CASTG	9 cut(s)	615, 690, 708, 1284, 2412, 2481, 2535, 2721, 2877
TseFI	GTSAC	2 cut(s)	1078, 1139
Tsp45I	GTSAC	2 cut(s)	1078, 1139
TspGWI	ACGGA	3 cut(s)	2355, 2530, 2675
TspRI	CASTG	9 cut(s)	615, 690, 708, 1284, 2412, 2481, 2535, 2721, 2877
Van91I	CCANNNNNTGG	2 cut(s)	2032, 2128
VneI	GTGCAC	1 cut(s)	2526
VpaK11BI	GGWCC	4 cut(s)	1507, 1645, 1783, 1971
XapI	RAATTY	6 cut(s)	16, 113, 643, 2132, 2309, 2568
XceI	RCATGY	4 cut(s)	1075, 1147, 2157, 2348
XmiI	GTMKAC	1 cut(s)	777
XmnI	GAANNNNTTC	3 cut(s)	836, 885, 2117
XspI	CTAG	8 cut(s)	81, 264, 875, 1805, 1929, 1956, 2093, 2147
ZraI	GACGTC	1 cut(s)	353
Zsp2I	ATGCAT	1 cut(s)	2350

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.