Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0002238

Physical Location & Seq

Genomic Coordinates Reverse (-)

16080565 .. 16084526

Gene Structure 3962 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G148500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1176 bp

ATGATGGGAGCAAAATCCAGTAAAAACAAGGGTGTCGATGGCCAAGCACAATCATCATCACCACCACCACCACCACCACCACCACAATCCCTTGAAATCAATACCAATTCCCAGGACACAGCCGATTTGAGCTCGTACGAGGCAGCCTGTAAACATGACCCGGCCTTACAATCATTTGATGCCACTCTCCGACAGCGCACTAGCCGTGTCATCACCTCACTTTCCACTGGACTCGAAGTTCGGTCCCTATCTCTTGACTCACTCAAAGAGGTTACTGATTGCTTGCTTGAAATGAACCAGGAAGTGGTCAAAGTCATTCTAGAATGCAAGAAGGATATATGGAACAGTAAAGAAATGTTCTCTCTTGTGGAGGAATACTTTGAGAACAGTCTTCAAACGATGGACTTCTGTACTGCCCTTGAGCAATGTCTCAAGCGCGCTCTGAATAACCAGCTGATAATTCAAGCTGCAGTTAGACAGTTTCAGGAAGAAGTAGAAGCTGGAGCTGAAGGGAAGAGGTGTGAGAGGACCTTACAAGAATTGAGGGCATTTAAGGCAGCTGGGGACCCTTTCACGGACGAATTCTTTATACTGTTTCAGTCAGTTTATAAGCAACAGGCATCGATGTTTGAGAAACTGCAACTTCGTAAGAGAAAACTTGATAAGAAGTTGAAATCAGTCAAAGCTTGGAGGAGAGTGTCAAATGTTATTTTTGTTGCCGGTTTCGTCTCTGTATTGGTTTTTTCTGTGGTGGCAGCTGCTATTGCTGCACCACCGCTTGTAACAGCCTTGGCAGGAGCATTGGCTGTTCCAATAGGTTCAATTGGAAAGTGGTGTAATTTGCTCTGGAATCGTTATGAGAGGACACTGAAGGGGCAGAGGGAGATAATCAGCTCAATGCAGATTGGGACTTATGTTACAATGAAGGACCTGGACAACATCCGGGTGCTTGTTGACAAATGGGAAATTCAGATTGAGTCACTGTTGCAGACTGCTGGTTTTGCTCTTAGAGAAGAGGACACTGTGAAGCTAGTGATAGATGAGATCAAGAAAAAGCTGGAAATGTTTGTGGAAACCATTGATAATTTAAGCCAACATGCTGATAAGTGTAGCCGGAATATAAGGAGGGCGAGGACAGTGATTTTGCAGAGAATAATTAGGCATCCCGACAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF677

Protein Analysis

392

Amino Acids

44.13

Weight (kDa)

8.66

Isoelectric Point (pI)

51.02

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002238)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G18630 AT2G18630
fragaria_vesca	FvH4_1g13660 FvH4_1g13660 FvH4_1g13660 FvH4_1g13660 FvH4_1g13660 FvH4_1g13660 FvH4_1g13660 FvH4_1g13660 FvH4_1g13660 FvH4_1g13670 FvH4_1g14080 FvH4_1g14080 FvH4_1g14080 FvH4_1g14080 FvH4_1g14080 FvH4_1g14080 FvH4_1g14080
malus_domestica	MD02G1154800.v1.1 MD11G1180100.v1.1 MD15G1269200.v1.1
prunus_persica	Prupe.7G148500_v2.0.a1
pyrus_communis	pycom02g15720
rosa_chinensis	RchiOBHm_Chr2g0102731 RchiOBHm_Chr2g0102741
rosa_laevigata	RLG00000017176
rosa_multiflora	Rmu_co8294297.1_g000001 Rmu_sc0006537.1_g000037 Rmu_sc0006537.1_g000040
rosa_roxburghii	Rroxscaffold_2G00140350 Rroxscaffold_2G00140360
rosa_rugosa	Rorug02G0109300 Rorug02G0109300
rosa_samantha	Rh2AG157500 Rh2AG157600 Rh2BG164000 Rh2BG164100 Rh2CG163700 Rh2CG163800 Rh2DG162800 Rh2DG162900
rosa_wichuraiana	Rw2G012220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	609
AccB7I	CCANNNNNTGG	1 cut(s)	304
AccII	CGCG	1 cut(s)	438
AciI	CCGC	1 cut(s)	776
AcoI	YGGCCR	1 cut(s)	40
AcsI	RAATTY	2 cut(s)	581, 966
AcuI	CTGAAG	2 cut(s)	528, 890
AfaI	GTAC	2 cut(s)	137, 412
AfiI	CCNNNNNNNGG	2 cut(s)	304, 574
AgsI	TTSAA	6 cut(s)	95, 290, 395, 464, 673, 822
AjnI	CCWGG	3 cut(s)	111, 297, 930
AloI	GAACNNNNNNTCC	2 cut(s)	222, 254
Alw21I	GWGCWC	1 cut(s)	134
Alw26I	GTCTC	2 cut(s)	434, 733
AoxI	GGCC	2 cut(s)	40, 162
ApeKI	GCWGC	6 cut(s)	143, 467, 557, 755, 758, 767
ApoI	RAATTY	2 cut(s)	581, 966
ArsI	GACNNNNNNTTYG	4 cut(s)	222, 254, 1126, 1158
AspLEI	GCGC	3 cut(s)	198, 438, 440
AspS9I	GGNCC	4 cut(s)	243, 528, 565, 928
AsuC2I	CCSGG	2 cut(s)	161, 944
AsuHPI	GGTGA	2 cut(s)	51, 205
AvaII	GGWCC	4 cut(s)	243, 528, 565, 928
BalI	TGGCCA	1 cut(s)	42
BanII	GRGCYC	1 cut(s)	134
BbsI	GAAGAC	1 cut(s)	383
Bbv12I	GWGCWC	1 cut(s)	134
BbvI	GCAGC	6 cut(s)	155, 454, 569, 745, 754, 767
BccI	CCATC	2 cut(s)	32, 394
BceAI	ACGGC	1 cut(s)	189
BciT130I	CCWGG	3 cut(s)	113, 299, 932
BcnI	CCSGG	2 cut(s)	161, 944
BcoDI	GTCTC	2 cut(s)	434, 733
BfaI	CTAG	3 cut(s)	201, 320, 1031
BfmI	CTRYAG	1 cut(s)	468
BisI	GCNGC	6 cut(s)	144, 468, 558, 756, 759, 768
BlsI	GCNGC	6 cut(s)	145, 469, 559, 757, 760, 769
Bme1390I	CCNGG	5 cut(s)	113, 161, 299, 932, 944
Bme18I	GGWCC	4 cut(s)	243, 528, 565, 928
BmgT120I	GGNCC	4 cut(s)	243, 528, 565, 928
BmiI	GGNNCC	3 cut(s)	245, 566, 567
BmrFI	CCNGG	5 cut(s)	113, 161, 299, 932, 944
BmsI	GCATC	3 cut(s)	169, 629, 1171
BpiI	GAAGAC	1 cut(s)	383
BpmI	CTGGAG	1 cut(s)	522
BpuEI	CTTGAG	2 cut(s)	416, 440
BpuMI	CCSGG	2 cut(s)	161, 944
Bsa29I	ATCGAT	1 cut(s)	623
BsaJI	CCNNGG	2 cut(s)	111, 789
Bsc4I	CCNNNNNNNGG	2 cut(s)	304, 574
Bse118I	RCCGGY	1 cut(s)	719
Bse1I	ACTGG	2 cut(s)	18, 232
Bse3DI	GCAATG	1 cut(s)	431
BseBI	CCWGG	3 cut(s)	113, 299, 932
BseCI	ATCGAT	1 cut(s)	623
BseDI	CCNNGG	2 cut(s)	111, 789
BseGI	GGATG	2 cut(s)	939, 1162
BseLI	CCNNNNNNNGG	2 cut(s)	304, 574
BseMI	GCAATG	1 cut(s)	431
BseNI	ACTGG	2 cut(s)	18, 232
BsePI	GCGCGC	1 cut(s)	436
BseRI	GAGGAG	1 cut(s)	706
BseXI	GCAGC	6 cut(s)	155, 454, 569, 745, 754, 767
BseYI	CCCAGC	1 cut(s)	560
BsgI	GTGCAG	1 cut(s)	753
Bsh1236I	CGCG	1 cut(s)	438
BshFI	GGCC	2 cut(s)	42, 164
BshVI	ATCGAT	1 cut(s)	623
BsiHKAI	GWGCWC	1 cut(s)	134
BsiSI	CCGG	4 cut(s)	161, 720, 943, 1114
BsiWI	CGTACG	1 cut(s)	135
BslFI	GGGAC	3 cut(s)	229, 578, 922
BslI	CCNNNNNNNGG	2 cut(s)	304, 574
BsmAI	GTCTC	2 cut(s)	434, 733
BsmBI	CGTCTC	1 cut(s)	733
BsmFI	GGGAC	3 cut(s)	229, 578, 922
BsmI	GAATGC	1 cut(s)	329
BsnI	GGCC	2 cut(s)	42, 164
Bsp1286I	GDGCHC	1 cut(s)	134
Bsp143I	GATC	1 cut(s)	1044
BspACI	CCGC	1 cut(s)	776
BspANI	GGCC	2 cut(s)	42, 164
BspDI	ATCGAT	1 cut(s)	623
BspFNI	CGCG	1 cut(s)	438
BspLI	GGNNCC	3 cut(s)	245, 566, 567
BspMAI	CTGCAG	1 cut(s)	472
BsrDI	GCAATG	1 cut(s)	431
BsrFI	RCCGGY	1 cut(s)	719
BsrI	ACTGG	2 cut(s)	18, 232
BssAI	RCCGGY	1 cut(s)	719
BssECI	CCNNGG	2 cut(s)	111, 789
BssHII	GCGCGC	1 cut(s)	436
BssMI	GATC	1 cut(s)	1044
BssT1I	CCWWGG	1 cut(s)	789
Bst2UI	CCWGG	3 cut(s)	113, 299, 932
Bst4CI	ACNGT	7 cut(s)	347, 389, 480, 594, 984, 1024, 1138
Bst6I	CTCTTC	2 cut(s)	509, 1008
BstC8I	GCNNGC	2 cut(s)	284, 438
BstDEI	CTNAG	1 cut(s)	1007
BstF5I	GGATG	2 cut(s)	939, 1162
BstFNI	CGCG	1 cut(s)	438
BstHHI	GCGC	3 cut(s)	198, 438, 440
BstKTI	GATC	1 cut(s)	1047
BstMAI	GTCTC	2 cut(s)	434, 733
BstMBI	GATC	1 cut(s)	1044
BstMWI	GCNNNNNNNGC	4 cut(s)	554, 764, 767, 1001
BstNI	CCWGG	3 cut(s)	113, 299, 932
BstNSI	RCATGY	1 cut(s)	1100
BstSCI	CCNGG	5 cut(s)	111, 159, 297, 930, 942
BstSFI	CTRYAG	1 cut(s)	468
BstUI	CGCG	1 cut(s)	438
BstV1I	GCAGC	6 cut(s)	155, 454, 569, 745, 754, 767
BstV2I	GAAGAC	1 cut(s)	383
Bsu15I	ATCGAT	1 cut(s)	623
BsuRI	GGCC	2 cut(s)	42, 164
BsuTUI	ATCGAT	1 cut(s)	623
BtsCI	GGATG	2 cut(s)	939, 1162
BtsIMutI	CAGTG	5 cut(s)	225, 866, 980, 1020, 1143
Cac8I	GCNNGC	2 cut(s)	284, 438
CfoI	GCGC	3 cut(s)	198, 438, 440
Cfr10I	RCCGGY	1 cut(s)	719
Cfr13I	GGNCC	4 cut(s)	243, 528, 565, 928
ClaI	ATCGAT	1 cut(s)	623
Csp6I	GTAC	2 cut(s)	136, 411
CviAII	CATG	2 cut(s)	155, 1097
CviQI	GTAC	2 cut(s)	136, 411
DdeI	CTNAG	1 cut(s)	1007
DpnI	GATC	1 cut(s)	1046
DpnII	GATC	1 cut(s)	1044
EaeI	YGGCCR	1 cut(s)	40
Eam1104I	CTCTTC	2 cut(s)	509, 1008
EarI	CTCTTC	2 cut(s)	509, 1008
Ecl136II	GAGCTC	1 cut(s)	132
Eco130I	CCWWGG	1 cut(s)	789
Eco24I	GRGCYC	1 cut(s)	134
Eco47I	GGWCC	4 cut(s)	243, 528, 565, 928
Eco53kI	GAGCTC	1 cut(s)	132
Eco57I	CTGAAG	2 cut(s)	528, 890
EcoICRI	GAGCTC	1 cut(s)	132
EcoO109I	RGGNCCY	3 cut(s)	528, 565, 928
EcoRI	GAATTC	1 cut(s)	581
EcoRII	CCWGG	3 cut(s)	111, 297, 930
EcoT14I	CCWWGG	1 cut(s)	789
EcoT38I	GRGCYC	1 cut(s)	134
ErhI	CCWWGG	1 cut(s)	789
Esp3I	CGTCTC	1 cut(s)	733
FaeI	CATG	2 cut(s)	158, 1100
FaiI	YATR	9 cut(s)	156, 338, 340, 590, 609, 858, 915, 1098, 1121
FaqI	GGGAC	3 cut(s)	229, 578, 922
FatI	CATG	2 cut(s)	154, 1096
Fnu4HI	GCNGC	6 cut(s)	144, 468, 558, 756, 759, 768
FokI	GGATG	2 cut(s)	926, 1149
FriOI	GRGCYC	1 cut(s)	134
Fsp4HI	GCNGC	6 cut(s)	144, 468, 558, 756, 759, 768
FspBI	CTAG	3 cut(s)	201, 320, 1031
GlaI	GCGC	3 cut(s)	197, 437, 439
GluI	GCNGC	6 cut(s)	144, 468, 558, 756, 759, 768
GsaI	CCCAGC	1 cut(s)	564
GsuI	CTGGAG	1 cut(s)	522
HaeIII	GGCC	2 cut(s)	42, 164
HapII	CCGG	4 cut(s)	161, 720, 943, 1114
HhaI	GCGC	3 cut(s)	198, 438, 440
Hin1II	CATG	2 cut(s)	158, 1100
Hin6I	GCGC	3 cut(s)	196, 436, 438
HinP1I	GCGC	3 cut(s)	196, 436, 438
HincII	GTYRAC	1 cut(s)	955
HindII	GTYRAC	1 cut(s)	955
HindIII	AAGCTT	1 cut(s)	684
HinfI	GANTC	4 cut(s)	231, 257, 850, 977
HpaII	CCGG	4 cut(s)	161, 720, 943, 1114
HphI	GGTGA	2 cut(s)	51, 205
Hpy166II	GTNNAC	2 cut(s)	152, 955
Hpy188I	TCNGA	3 cut(s)	191, 444, 972
Hpy188III	TCNNGA	6 cut(s)	254, 320, 485, 847, 1048, 1166
Hpy8I	GTNNAC	2 cut(s)	152, 955
HpyAV	CCTTC	4 cut(s)	325, 503, 865, 919
HpyCH4III	ACNGT	7 cut(s)	347, 389, 480, 594, 984, 1024, 1138
HpyCH4V	TGCA	7 cut(s)	327, 470, 640, 770, 901, 988, 1147
HpyF10VI	GCNNNNNNNGC	4 cut(s)	554, 764, 767, 1001
HpyF3I	CTNAG	1 cut(s)	1007
Hsp92II	CATG	2 cut(s)	158, 1100
HspAI	GCGC	3 cut(s)	196, 436, 438
KflI	GGGWCCC	1 cut(s)	565
Kzo9I	GATC	1 cut(s)	1044
LmnI	GCTCC	3 cut(s)	8, 503, 797
Lsp1109I	GCAGC	6 cut(s)	155, 454, 569, 745, 754, 767
LweI	GCATC	3 cut(s)	169, 629, 1171
MaeI	CTAG	3 cut(s)	201, 320, 1031
MaeIII	GTNAC	4 cut(s)	271, 781, 916, 978
MalI	GATC	1 cut(s)	1046
MboI	GATC	1 cut(s)	1044
MboII	GAAGA	4 cut(s)	383, 500, 526, 1025
MfeI	CAATTG	1 cut(s)	822
MhlI	GDGCHC	1 cut(s)	134
MlsI	TGGCCA	1 cut(s)	42
MluCI	AATT	9 cut(s)	106, 459, 539, 581, 822, 838, 966, 1084, 1155
MluNI	TGGCCA	1 cut(s)	42
MlyI	GAGTC	3 cut(s)	225, 251, 986
MmeI	TCCRAC	1 cut(s)	214
Mox20I	TGGCCA	1 cut(s)	42
MscI	TGGCCA	1 cut(s)	42
MseI	TTAA	2 cut(s)	552, 1088
MslI	CAYNNNNRTG	1 cut(s)	944
Msp20I	TGGCCA	1 cut(s)	42
MspA1I	CMGCKG	3 cut(s)	454, 560, 758
MspI	CCGG	4 cut(s)	161, 720, 943, 1114
MspR9I	CCNGG	5 cut(s)	113, 161, 299, 932, 944
MunI	CAATTG	1 cut(s)	822
Mva1269I	GAATGC	1 cut(s)	329
MvaI	CCWGG	3 cut(s)	113, 299, 932
MvnI	CGCG	1 cut(s)	438
MwoI	GCNNNNNNNGC	4 cut(s)	554, 764, 767, 1001
NciI	CCSGG	2 cut(s)	161, 944
NdeII	GATC	1 cut(s)	1044
NlaIII	CATG	2 cut(s)	158, 1100
NlaIV	GGNNCC	3 cut(s)	245, 566, 567
NmuCI	GTSAC	1 cut(s)	978
NspI	RCATGY	1 cut(s)	1100
PauI	GCGCGC	1 cut(s)	436
PctI	GAATGC	1 cut(s)	329
PfeI	GAWTC	1 cut(s)	850
Pfl23II	CGTACG	1 cut(s)	135
PflMI	CCANNNNNTGG	1 cut(s)	304
PkrI	GCNGC	6 cut(s)	145, 469, 559, 757, 760, 769
PleI	GAGTC	3 cut(s)	225, 251, 985
PpsI	GAGTC	3 cut(s)	225, 251, 985
PpuMI	RGGWCCY	3 cut(s)	528, 565, 928
PsiI	TTATAA	1 cut(s)	609
Psp124BI	GAGCTC	1 cut(s)	134
Psp5II	RGGWCCY	3 cut(s)	528, 565, 928
Psp6I	CCWGG	3 cut(s)	111, 297, 930
PspFI	CCCAGC	1 cut(s)	560
PspGI	CCWGG	3 cut(s)	111, 297, 930
PspLI	CGTACG	1 cut(s)	135
PspN4I	GGNNCC	3 cut(s)	245, 566, 567
PspPI	GGNCC	4 cut(s)	243, 528, 565, 928
PspPPI	RGGWCCY	3 cut(s)	528, 565, 928
PstI	CTGCAG	1 cut(s)	472
PteI	GCGCGC	1 cut(s)	436
PvuII	CAGCTG	3 cut(s)	454, 560, 758
RsaI	GTAC	2 cut(s)	137, 412
RsaNI	GTAC	2 cut(s)	136, 411
RseI	CAYNNNNRTG	1 cut(s)	944
SacI	GAGCTC	1 cut(s)	134
SaqAI	TTAA	2 cut(s)	552, 1088
SatI	GCNGC	6 cut(s)	144, 468, 558, 756, 759, 768
Sau3AI	GATC	1 cut(s)	1044
Sau96I	GGNCC	4 cut(s)	243, 528, 565, 928
SchI	GAGTC	3 cut(s)	225, 251, 986
ScrFI	CCNGG	5 cut(s)	113, 161, 299, 932, 944
SduI	GDGCHC	1 cut(s)	134
SfaNI	GCATC	3 cut(s)	169, 629, 1171
SfcI	CTRYAG	1 cut(s)	468
SinI	GGWCC	4 cut(s)	243, 528, 565, 928
SmiMI	CAYNNNNRTG	1 cut(s)	944
SmlI	CTYRAG	2 cut(s)	419, 431
SmoI	CTYRAG	2 cut(s)	419, 431
Sse9I	AATT	9 cut(s)	106, 459, 539, 581, 822, 838, 966, 1084, 1155
SsiI	CCGC	1 cut(s)	776
SspMI	CTAG	3 cut(s)	201, 320, 1031
SstI	GAGCTC	1 cut(s)	134
StyD4I	CCNGG	5 cut(s)	111, 159, 297, 930, 942
StyI	CCWWGG	1 cut(s)	789
TaaI	ACNGT	7 cut(s)	347, 389, 480, 594, 984, 1024, 1138
TaqI	TCGA	3 cut(s)	36, 234, 623
TaqII	GACCGA	1 cut(s)	231
TasI	AATT	9 cut(s)	106, 459, 539, 581, 822, 838, 966, 1084, 1155
TatI	WGTACW	1 cut(s)	410
TfiI	GAWTC	1 cut(s)	850
Tru1I	TTAA	2 cut(s)	552, 1088
Tru9I	TTAA	2 cut(s)	552, 1088
TscAI	CASTG	5 cut(s)	232, 873, 987, 1027, 1143
TseFI	GTSAC	1 cut(s)	978
TseI	GCWGC	6 cut(s)	143, 467, 557, 755, 758, 767
Tsp45I	GTSAC	1 cut(s)	978
TspDTI	ATGAA	2 cut(s)	308, 938
TspGWI	ACGGA	1 cut(s)	590
TspRI	CASTG	5 cut(s)	232, 873, 987, 1027, 1143
Van91I	CCANNNNNTGG	1 cut(s)	304
VpaK11BI	GGWCC	4 cut(s)	243, 528, 565, 928
XapI	RAATTY	2 cut(s)	581, 966
XbaI	TCTAGA	1 cut(s)	319
XceI	RCATGY	1 cut(s)	1100
XspI	CTAG	3 cut(s)	201, 320, 1031

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.