FvH4_2g25720

UDP-glucuronic acid decarboxylase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0002167
Physical Location & Seq
Forward (+)
20781263 .. 20785024
3762 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g25720.t2

Sequence Viewer

Length: 1320 bp
ATGGGGTCGGAGCTGATATTCCGGGGCGGGCACGACGAGGCCCAGCCCGCTTCCGACACCTACTCGCCGAAACGCCCGAAGCCTTGGGCCTCGGTGACCCGTCCGATTGGGTACCTCCTCCGGGAACAGCGCCTGATTTTCATCCTGGTCGGCATTGTCATCGCCACCGTCTGCTTCACCCTCCTGCCGTCGTCTCGCCCCGCCTTCCACGGCCAGAACCCGATCCCCAACGACTTCGTCAGGTTCGACTTCGAGTCCACCCACCTCTCCCACAAACCGGCCTACGAGCGCCGGTTCGGGTTGACCAATTACAATTCCGGCGGGAAGGTCCCGCTGGGCCTCAAGCGCAAGGGTCTCCGGATCGTCGTCACCGGCGGGGCCGGGTTCGTCGGGTCTCACCTCGTCGACCGCCTCATGGAACGAGGCGACAGTGTAATTGTGGTAGATAATTTCTTCACCGGGAGGAAAGAGAATGTGCAGCATCATTTCGGGAACCCGAGATTCGAATTAATCCGACACGACGTCGTCGAGCCTCTCCTCCTCGAAGTCGACCAGATCTACCATCTCGCCTGTCCTGCCTCCCCTGTCCATTACAAGTTCAACCCCGTCAAGACTATCAAGACAAATGTGGTGGGAACTTTGAACATGCTCGGGCTGGCTAAGCGGGTCGGAGCTCGGTTCTTGTTGACCAGCACCAGCGAGGTCTACGGCGATCCTCTGCAGCACCCTCAGGTCGAGACCTACTGGGGAAACGTCAACCCCATCGGTGTCCGAAGTTGCTACGACGAGGGAAAGCGTACGGCTGAGACATTGACCATGGACTACCATAGAGGAGCTGGAGTTGAGGTTAGGATTGCTAGGATCTTCAACACATATGGCCCGAGAATGTGCATAGACGACGGCCGTGTTGTTAGTAACTTTGTTGCTCAGGCGTTGAGGAAAGAGCCTATGACTGTTTACGGTGATGGAAAGCAGACGAGGAGTTTCCAATACGTTTCTGATCTGGTGGATGGTCTGATGCGGCTGATGGAAGGAGAGCATGTTGGACCTTTCAATCTCGGGAACCCTGGTGAATTCACCATGCTTGAGCTCGCTAAGGTGGTCCAAGAAACAATTGACAAAGATGCAAAGATTGAGTTCAGGCCAAATACTGAGGATGACCCACACAAGAGGAAGCCTGATATCACAAAGGCCAAAGACCTTCTGGGCTGGCAACCAAAGGTGTCCCTCCGCAAGGGACTCCCACTCATGGTCTCAGACTTCAGCAAACGTATCTTTGGTGACCACAAGGAAGCTGCCGGTGCCACCACCACCATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00520 ko01100 map00520 map01100
Pfam Domains
Protein Families
GDP_Man_Dehyd

Protein Analysis

440

Amino Acids

49.2

Weight (kDa)

9.14

Isoelectric Point (pI)

28.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RmlD_sub_bind PF04321 120 - 369 2.2e-09 RmlD substrate binding domain
Epimerase PF01370 121 - 354 9.6e-48 NAD dependent epimerase/dehydratase family
3Beta_HSD PF01073 122 - 335 5.5e-13 3-beta hydroxysteroid dehydrogenase/isomerase family
GDP_Man_Dehyd PF16363 123 - 365 7.6e-50 GDP-mannose 4,6 dehydratase
NAD_binding_4 PF07993 175 - 288 2.8e-06 Male sterility protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 525
Acc65I GGTACC 1 cut(s) 111
AccB1I GGYRCC 2 cut(s) 111, 1301
AccI GTMKAC 3 cut(s) 405, 549, 705
AccIII TCCGGA 1 cut(s) 357
AclWI GGATC 4 cut(s) 217, 368, 707, 869
AcoI YGGCCR 2 cut(s) 211, 901
AcsI RAATTY 1 cut(s) 1073
AcuI CTGAAG 1 cut(s) 1246
AcyI GRCGYC 1 cut(s) 522
AfaI GTAC 2 cut(s) 113, 799
AfiI CCNNNNNNNGG 5 cut(s) 121, 277, 415, 1234, 1249
AgsI TTSAA 4 cut(s) 601, 643, 868, 1054
AhdI GACNNNNNGTC 2 cut(s) 253, 521
AjnI CCWGG 2 cut(s) 144, 1066
AluBI AGCT 5 cut(s) 13, 674, 836, 1090, 1295
AluI AGCT 5 cut(s) 13, 674, 836, 1090, 1295
Alw21I GWGCWC 2 cut(s) 676, 1092
Alw26I GTCTC 6 cut(s) 198, 359, 399, 731, 800, 1258
AlwI GGATC 4 cut(s) 217, 368, 707, 869
AlwNI CAGNNNCTG 1 cut(s) 133
Ama87I CYCGRG 4 cut(s) 496, 650, 880, 1058
Aor13HI TCCGGA 1 cut(s) 357
ApeKI GCWGC 3 cut(s) 478, 721, 1295
ApoI RAATTY 1 cut(s) 1073
AseI ATTAAT 1 cut(s) 509
Asp718I GGTACC 1 cut(s) 111
AspLEI GCGC 3 cut(s) 132, 291, 348
AspS9I GGNCC 8 cut(s) 40, 87, 328, 337, 378, 878, 1046, 1102
AsuC2I CCSGG 4 cut(s) 23, 122, 382, 460
AsuHPI GGTGA 9 cut(s) 106, 169, 361, 389, 448, 974, 1069, 1082, 1292
AsuII TTCGAA 1 cut(s) 504
AvaI CYCGRG 4 cut(s) 496, 650, 880, 1058
AvaII GGWCC 3 cut(s) 328, 1046, 1102
AxyI CCTNAGG 1 cut(s) 729
BaeGI GKGCMC 1 cut(s) 33
BanI GGYRCC 2 cut(s) 111, 1301
BanII GRGCYC 2 cut(s) 676, 1092
Bbv12I GWGCWC 2 cut(s) 676, 1092
BbvI GCAGC 3 cut(s) 490, 733, 1282
BccI CCATC 5 cut(s) 570, 770, 959, 1004, 1021
BceAI ACGGC 6 cut(s) 172, 226, 724, 816, 888, 916
BcgI CGANNNNNNTGC 2 cut(s) 142, 176
BciT130I CCWGG 2 cut(s) 146, 1068
BcnI CCSGG 4 cut(s) 23, 122, 382, 460
BcoDI GTCTC 6 cut(s) 198, 359, 399, 731, 800, 1258
BfaI CTAG 1 cut(s) 858
BfmI CTRYAG 1 cut(s) 719
BfoI RGCGCY 2 cut(s) 133, 292
BglII AGATCT 1 cut(s) 555
BisI GCNGC 4 cut(s) 479, 722, 1022, 1296
BlpI GCTNAGC 1 cut(s) 660
BlsI GCNGC 4 cut(s) 480, 723, 1023, 1297
Bme1390I CCNGG 6 cut(s) 23, 122, 146, 382, 460, 1068
Bme18I GGWCC 3 cut(s) 328, 1046, 1102
BmeRI GACNNNNNGTC 2 cut(s) 253, 521
BmeT110I CYCGRG 4 cut(s) 496, 650, 880, 1058
BmgT120I GGNCC 8 cut(s) 40, 87, 328, 337, 378, 878, 1046, 1102
BmiI GGNNCC 6 cut(s) 113, 330, 379, 494, 1064, 1303
BmrFI CCNGG 6 cut(s) 23, 122, 146, 382, 460, 1068
BmrI ACTGGG 1 cut(s) 754
BmsI GCATC 3 cut(s) 490, 1008, 1114
BmuI ACTGGG 1 cut(s) 754
BpmI CTGGAG 1 cut(s) 858
Bpu10I CCTNAGC 2 cut(s) 927, 1095
Bpu1102I GCTNAGC 1 cut(s) 660
Bpu14I TTCGAA 1 cut(s) 504
BpuEI CTTGAG 2 cut(s) 326, 1106
BpuMI CCSGG 4 cut(s) 23, 122, 382, 460
BsaBI GATNNNNATC 1 cut(s) 140
BsaHI GRCGYC 1 cut(s) 522
BsaI GGTCTC 4 cut(s) 359, 399, 731, 1258
BsaJI CCNNGG 6 cut(s) 22, 83, 90, 208, 816, 1066
BsaWI WCCGGW 1 cut(s) 357
BsaXI ACNNNNNCTCC 6 cut(s) 825, 831, 855, 861, 1026, 1056
Bsc4I CCNNNNNNNGG 5 cut(s) 121, 277, 415, 1234, 1249
Bse118I RCCGGY 4 cut(s) 277, 291, 371, 1298
Bse1I ACTGG 1 cut(s) 749
Bse21I CCTNAGG 1 cut(s) 729
Bse8I GATNNNNATC 1 cut(s) 140
BseAI TCCGGA 1 cut(s) 357
BseBI CCWGG 2 cut(s) 146, 1068
BseDI CCNNGG 6 cut(s) 22, 83, 90, 208, 816, 1066
BseGI GGATG 3 cut(s) 141, 1015, 1162
BseJI GATNNNNATC 1 cut(s) 140
BseLI CCNNNNNNNGG 5 cut(s) 121, 277, 415, 1234, 1249
BseMII CTCAG 5 cut(s) 743, 795, 941, 1143, 1269
BseNI ACTGG 1 cut(s) 749
BseRI GAGGAG 5 cut(s) 107, 527, 530, 846, 994
BseSI GKGCMC 1 cut(s) 33
BseX3I CGGCCG 1 cut(s) 901
BseXI GCAGC 3 cut(s) 490, 733, 1282
BseYI CCCAGC 2 cut(s) 42, 334
BsgI GTGCAG 1 cut(s) 497
Bsh1285I CGRYCG 2 cut(s) 409, 904
BshNI GGYRCC 2 cut(s) 111, 1301
BsiEI CGRYCG 2 cut(s) 409, 904
BsiHKAI GWGCWC 2 cut(s) 676, 1092
BsiHKCI CYCGRG 4 cut(s) 496, 650, 880, 1058
BsiWI CGTACG 1 cut(s) 797
BslFI GGGAC 3 cut(s) 314, 1210, 1251
BslI CCNNNNNNNGG 5 cut(s) 121, 277, 415, 1234, 1249
BsmAI GTCTC 6 cut(s) 198, 359, 399, 731, 800, 1258
BsmBI CGTCTC 1 cut(s) 198
BsmFI GGGAC 3 cut(s) 314, 1210, 1251
Bso31I GGTCTC 4 cut(s) 359, 399, 731, 1258
BsoBI CYCGRG 4 cut(s) 496, 650, 880, 1058
Bsp119I TTCGAA 1 cut(s) 504
Bsp1286I GDGCHC 3 cut(s) 33, 676, 1092
Bsp13I TCCGGA 1 cut(s) 357
Bsp143I GATC 6 cut(s) 222, 360, 555, 712, 861, 1000
Bsp1720I GCTNAGC 1 cut(s) 660
Bsp19I CCATGG 1 cut(s) 816
BspCNI CTCAG 5 cut(s) 742, 796, 940, 1144, 1268
BspEI TCCGGA 1 cut(s) 357
BspLI GGNNCC 6 cut(s) 113, 330, 379, 494, 1064, 1303
BspMAI CTGCAG 1 cut(s) 723
BspPI GGATC 4 cut(s) 217, 368, 707, 869
BspT104I TTCGAA 1 cut(s) 504
BspT107I GGYRCC 2 cut(s) 111, 1301
BspTNI GGTCTC 4 cut(s) 359, 399, 731, 1258
BsrFI RCCGGY 4 cut(s) 277, 291, 371, 1298
BsrI ACTGG 1 cut(s) 749
BssAI RCCGGY 4 cut(s) 277, 291, 371, 1298
BssECI CCNNGG 6 cut(s) 22, 83, 90, 208, 816, 1066
BssMI GATC 6 cut(s) 222, 360, 555, 712, 861, 1000
BssNI GRCGYC 1 cut(s) 522
BssT1I CCWWGG 2 cut(s) 83, 816
Bst2UI CCWGG 2 cut(s) 146, 1068
Bst4CI ACNGT 4 cut(s) 169, 431, 955, 962
BstACI GRCGYC 1 cut(s) 522
BstBI TTCGAA 1 cut(s) 504
BstC8I GCNNGC 5 cut(s) 29, 48, 657, 1092, 1211
BstDEI CTNAG 7 cut(s) 660, 729, 804, 927, 1095, 1152, 1255
BstDSI CCRYGG 2 cut(s) 208, 816
BstEII GGTNACC 2 cut(s) 94, 1280
BstENI CCTNNNNNAGG 1 cut(s) 1232
BstF5I GGATG 3 cut(s) 141, 1015, 1162
BstH2I RGCGCY 2 cut(s) 133, 292
BstHHI GCGC 3 cut(s) 132, 291, 348
BstKTI GATC 6 cut(s) 225, 363, 558, 715, 864, 1003
BstMAI GTCTC 6 cut(s) 198, 359, 399, 731, 800, 1258
BstMBI GATC 6 cut(s) 222, 360, 555, 712, 861, 1000
BstMCI CGRYCG 2 cut(s) 409, 904
BstMWI GCNNNNNNNGC 5 cut(s) 47, 345, 575, 661, 1301
BstNI CCWGG 2 cut(s) 146, 1068
BstNSI RCATGY 2 cut(s) 649, 1043
BstPI GGTNACC 2 cut(s) 94, 1280
BstSCI CCNGG 6 cut(s) 21, 120, 144, 380, 458, 1066
BstSFI CTRYAG 1 cut(s) 719
BstSLI GKGCMC 1 cut(s) 33
BstV1I GCAGC 3 cut(s) 490, 733, 1282
BstX2I RGATCY 2 cut(s) 555, 861
BstYI RGATCY 2 cut(s) 555, 861
BstZI CGGCCG 1 cut(s) 901
Bsu36I CCTNAGG 1 cut(s) 729
BtgI CCRYGG 2 cut(s) 208, 816
BtgZI GCGATG 1 cut(s) 145
BtsCI GGATG 3 cut(s) 141, 1015, 1162
BtsIMutI CAGTG 1 cut(s) 436
Cac8I GCNNGC 5 cut(s) 29, 48, 657, 1092, 1211
CaiI CAGNNNCTG 1 cut(s) 133
CfoI GCGC 3 cut(s) 132, 291, 348
Cfr10I RCCGGY 4 cut(s) 277, 291, 371, 1298
Cfr13I GGNCC 8 cut(s) 40, 87, 328, 337, 378, 878, 1046, 1102
Csp6I GTAC 2 cut(s) 112, 798
CspCI CAANNNNNGTGG 2 cut(s) 612, 647
CviAII CATG 7 cut(s) 415, 646, 817, 1040, 1081, 1249, 1315
CviQI GTAC 2 cut(s) 112, 798
DdeI CTNAG 7 cut(s) 660, 729, 804, 927, 1095, 1152, 1255
DpnI GATC 6 cut(s) 224, 362, 557, 714, 863, 1002
DpnII GATC 6 cut(s) 222, 360, 555, 712, 861, 1000
DriI GACNNNNNGTC 2 cut(s) 253, 521
EaeI YGGCCR 2 cut(s) 211, 901
EagI CGGCCG 1 cut(s) 901
Eam1105I GACNNNNNGTC 2 cut(s) 253, 521
Ecl136II GAGCTC 2 cut(s) 674, 1090
EclXI CGGCCG 1 cut(s) 901
Eco130I CCWWGG 2 cut(s) 83, 816
Eco24I GRGCYC 2 cut(s) 676, 1092
Eco31I GGTCTC 4 cut(s) 359, 399, 731, 1258
Eco32I GATATC 1 cut(s) 1183
Eco47I GGWCC 3 cut(s) 328, 1046, 1102
Eco52I CGGCCG 1 cut(s) 901
Eco53kI GAGCTC 2 cut(s) 674, 1090
Eco57I CTGAAG 1 cut(s) 1246
Eco81I CCTNAGG 1 cut(s) 729
Eco88I CYCGRG 4 cut(s) 496, 650, 880, 1058
Eco91I GGTNACC 2 cut(s) 94, 1280
EcoICRI GAGCTC 2 cut(s) 674, 1090
EcoNI CCTNNNNNAGG 1 cut(s) 1232
EcoO109I RGGNCCY 1 cut(s) 328
EcoO65I GGTNACC 2 cut(s) 94, 1280
EcoRI GAATTC 1 cut(s) 1073
EcoRII CCWGG 2 cut(s) 144, 1066
EcoRV GATATC 1 cut(s) 1183
EcoT14I CCWWGG 2 cut(s) 83, 816
EcoT38I GRGCYC 2 cut(s) 676, 1092
ErhI CCWWGG 2 cut(s) 83, 816
Esp3I CGTCTC 1 cut(s) 198
FaeI CATG 7 cut(s) 418, 649, 820, 1043, 1084, 1252, 1318
FaqI GGGAC 3 cut(s) 314, 1210, 1251
FatI CATG 7 cut(s) 414, 645, 816, 1039, 1080, 1248, 1314
FauI CCCGC 7 cut(s) 20, 55, 208, 314, 339, 368, 657
FauNDI CATATG 1 cut(s) 874
FblI GTMKAC 3 cut(s) 405, 549, 705
Fnu4HI GCNGC 4 cut(s) 479, 722, 1022, 1296
FokI GGATG 3 cut(s) 128, 1022, 1169
FriOI GRGCYC 2 cut(s) 676, 1092
Fsp4HI GCNGC 4 cut(s) 479, 722, 1022, 1296
FspBI CTAG 1 cut(s) 858
GlaI GCGC 3 cut(s) 131, 290, 347
GluI GCNGC 4 cut(s) 479, 722, 1022, 1296
GsaI CCCAGC 2 cut(s) 46, 338
GsuI CTGGAG 1 cut(s) 858
HaeII RGCGCY 2 cut(s) 133, 292
HhaI GCGC 3 cut(s) 132, 291, 348
Hin1I GRCGYC 1 cut(s) 522
Hin1II CATG 7 cut(s) 418, 649, 820, 1043, 1084, 1252, 1318
Hin6I GCGC 3 cut(s) 130, 289, 346
HinP1I GCGC 3 cut(s) 130, 289, 346
HincII GTYRAC 5 cut(s) 303, 406, 550, 687, 757
HindII GTYRAC 5 cut(s) 303, 406, 550, 687, 757
HinfI GANTC 3 cut(s) 254, 501, 1239
HphI GGTGA 9 cut(s) 106, 169, 361, 389, 448, 974, 1069, 1082, 1292
Hpy166II GTNNAC 8 cut(s) 258, 303, 406, 550, 687, 706, 757, 958
Hpy188I TCNGA 9 cut(s) 10, 55, 105, 515, 671, 773, 1000, 1017, 1258
Hpy188III TCNNGA 6 cut(s) 358, 490, 610, 619, 736, 1060
Hpy8I GTNNAC 8 cut(s) 258, 303, 406, 550, 687, 706, 757, 958
HpyAV CCTTC 4 cut(s) 214, 319, 1025, 1211
HpyCH4III ACNGT 4 cut(s) 169, 431, 955, 962
HpyCH4IV ACGT 4 cut(s) 522, 753, 993, 1270
HpyCH4V TGCA 4 cut(s) 478, 721, 891, 1127
HpyF10VI GCNNNNNNNGC 5 cut(s) 47, 345, 575, 661, 1301
HpyF3I CTNAG 7 cut(s) 660, 729, 804, 927, 1095, 1152, 1255
HpySE526I ACGT 4 cut(s) 522, 753, 993, 1270
Hsp92I GRCGYC 1 cut(s) 522
Hsp92II CATG 7 cut(s) 418, 649, 820, 1043, 1084, 1252, 1318
HspAI GCGC 3 cut(s) 130, 289, 346
Kpn2I TCCGGA 1 cut(s) 357
KpnI GGTACC 1 cut(s) 115
Kzo9I GATC 6 cut(s) 222, 360, 555, 712, 861, 1000
LmnI GCTCC 3 cut(s) 10, 671, 833
Lsp1109I GCAGC 3 cut(s) 490, 733, 1282
LweI GCATC 3 cut(s) 490, 1008, 1114
MaeI CTAG 1 cut(s) 858
MaeII ACGT 4 cut(s) 522, 753, 993, 1270
MaeIII GTNAC 4 cut(s) 94, 367, 914, 1280
MalI GATC 6 cut(s) 224, 362, 557, 714, 863, 1002
MboI GATC 6 cut(s) 222, 360, 555, 712, 861, 1000
MboII GAAGA 2 cut(s) 445, 856
MfeI CAATTG 1 cut(s) 1113
MflI RGATCY 2 cut(s) 555, 861
MhlI GDGCHC 3 cut(s) 33, 676, 1092
MluCI AATT 7 cut(s) 307, 313, 435, 448, 506, 1073, 1113
MlyI GAGTC 2 cut(s) 263, 1233
MmeI TCCRAC 4 cut(s) 78, 538, 649, 1024
MroI TCCGGA 1 cut(s) 357
MseI TTAA 1 cut(s) 509
MslI CAYNNNNRTG 1 cut(s) 1313
MspA1I CMGCKG 1 cut(s) 334
MspR9I CCNGG 6 cut(s) 23, 122, 146, 382, 460, 1068
MunI CAATTG 1 cut(s) 1113
MvaI CCWGG 2 cut(s) 146, 1068
MwoI GCNNNNNNNGC 5 cut(s) 47, 345, 575, 661, 1301
NciI CCSGG 4 cut(s) 23, 122, 382, 460
NcoI CCATGG 1 cut(s) 816
NdeI CATATG 1 cut(s) 874
NdeII GATC 6 cut(s) 222, 360, 555, 712, 861, 1000
NlaIII CATG 7 cut(s) 418, 649, 820, 1043, 1084, 1252, 1318
NlaIV GGNNCC 6 cut(s) 113, 330, 379, 494, 1064, 1303
NmuCI GTSAC 3 cut(s) 94, 367, 1280
NspI RCATGY 2 cut(s) 649, 1043
NspV TTCGAA 1 cut(s) 504
PcsI WCGNNNNNNNCGW 2 cut(s) 243, 525
PfeI GAWTC 1 cut(s) 501
Pfl23II CGTACG 1 cut(s) 797
PflFI GACNNNGTC 2 cut(s) 236, 524
PfoI TCCNGGA 1 cut(s) 120
PkrI GCNGC 4 cut(s) 480, 723, 1023, 1297
PleI GAGTC 2 cut(s) 262, 1233
PpsI GAGTC 2 cut(s) 262, 1233
PpuMI RGGWCCY 1 cut(s) 328
PshBI ATTAAT 1 cut(s) 509
Psp124BI GAGCTC 2 cut(s) 676, 1092
Psp5II RGGWCCY 1 cut(s) 328
Psp6I CCWGG 2 cut(s) 144, 1066
PspEI GGTNACC 2 cut(s) 94, 1280
PspFI CCCAGC 2 cut(s) 42, 334
PspGI CCWGG 2 cut(s) 144, 1066
PspLI CGTACG 1 cut(s) 797
PspN4I GGNNCC 6 cut(s) 113, 330, 379, 494, 1064, 1303
PspPI GGNCC 8 cut(s) 40, 87, 328, 337, 378, 878, 1046, 1102
PspPPI RGGWCCY 1 cut(s) 328
PstI CTGCAG 1 cut(s) 723
PstNI CAGNNNCTG 1 cut(s) 133
PsuI RGATCY 2 cut(s) 555, 861
PsyI GACNNNGTC 2 cut(s) 236, 524
RsaI GTAC 2 cut(s) 113, 799
RsaNI GTAC 2 cut(s) 112, 798
RseI CAYNNNNRTG 1 cut(s) 1313
SacI GAGCTC 2 cut(s) 676, 1092
SalI GTCGAC 2 cut(s) 404, 548
SaqAI TTAA 1 cut(s) 509
SatI GCNGC 4 cut(s) 479, 722, 1022, 1296
Sau3AI GATC 6 cut(s) 222, 360, 555, 712, 861, 1000
Sau96I GGNCC 8 cut(s) 40, 87, 328, 337, 378, 878, 1046, 1102
SchI GAGTC 2 cut(s) 263, 1233
ScrFI CCNGG 6 cut(s) 23, 122, 146, 382, 460, 1068
SduI GDGCHC 3 cut(s) 33, 676, 1092
SfaNI GCATC 3 cut(s) 490, 1008, 1114
SfcI CTRYAG 1 cut(s) 719
SfuI TTCGAA 1 cut(s) 504
SgrAI CRCCGGYG 1 cut(s) 371
SinI GGWCC 3 cut(s) 328, 1046, 1102
SmiMI CAYNNNNRTG 1 cut(s) 1313
SmlI CTYRAG 2 cut(s) 341, 1085
SmoI CTYRAG 2 cut(s) 341, 1085
Sse9I AATT 7 cut(s) 307, 313, 435, 448, 506, 1073, 1113
SspMI CTAG 1 cut(s) 858
SstI GAGCTC 2 cut(s) 676, 1092
StyD4I CCNGG 6 cut(s) 21, 120, 144, 380, 458, 1066
StyI CCWWGG 2 cut(s) 83, 816
TaaI ACNGT 4 cut(s) 169, 431, 955, 962
TaiI ACGT 4 cut(s) 525, 756, 996, 1273
TaqI TCGA 8 cut(s) 246, 252, 405, 504, 528, 543, 549, 735
TasI AATT 7 cut(s) 307, 313, 435, 448, 506, 1073, 1113
TauI GCSGC 1 cut(s) 1024
TfiI GAWTC 1 cut(s) 501
Tru1I TTAA 1 cut(s) 509
Tru9I TTAA 1 cut(s) 509
TscAI CASTG 1 cut(s) 436
TseFI GTSAC 3 cut(s) 94, 367, 1280
TseI GCWGC 3 cut(s) 478, 721, 1295
Tsp45I GTSAC 3 cut(s) 94, 367, 1280
TspDTI ATGAA 1 cut(s) 130
TspRI CASTG 1 cut(s) 436
Tth111I GACNNNGTC 2 cut(s) 236, 524
VpaK11BI GGWCC 3 cut(s) 328, 1046, 1102
VspI ATTAAT 1 cut(s) 509
XagI CCTNNNNNAGG 1 cut(s) 1232
XapI RAATTY 1 cut(s) 1073
XceI RCATGY 2 cut(s) 649, 1043
XcmI CCANNNNNNNNNTGG 2 cut(s) 833, 1201
XmiI GTMKAC 3 cut(s) 405, 549, 705
XspI CTAG 1 cut(s) 858
ZraI GACGTC 1 cut(s) 523
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.