MD03G1288200.v1.1

UDP-glucuronic acid decarboxylase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
OG0002167
Physical Location & Seq
Forward (+)
36696668 .. 36701142
4475 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1288200.v1.1.491

Sequence Viewer

Length: 1320 bp
ATGGGTTCGGAGCTGATTTTCCGAGGGCACGAAGCCGACCAACAGGTGGCGGACACCTATTCGCCCAAACCCCCAAAGCCGTGGGCCTCCGTGACCCGCCCGATTCACTACTTGCTCCGAGAGCAGCGCCTCGTTTTCATCCTCGTGGGCATTGCTATCGCCACCGTAGTGTTCACCCTCCTCCCGTCCTCCGCCCCTATTTCTCCGTACGCCAGCGGTAACGTCCCGATCTCGAACGAGTACGTCCGGTACGACTTCGATTCGTCGGCGACGGCCCATTACAAGCCGGCCTACGACCGACGGTTCGGTTTGAACAGCTGGAATTCTGGCGGCAAGGTGCCTCTGGGGCTGAAACGAAAGGGGCTCCGGATCGTCGTGACTGGCGGGGCCGGGTTCGTCGGATCGCATCTTGTGGACCGTCTGATTGAGCGAGGCGACAGCGTGATCGTTGTGGACAATTTCTTCACCGGAAGGAAGGAGAATGTGATGCACCATTTCGGAAACCCGAGGTTCGAGCTCATCCGGCACGACGTCGTTGAGCCTCTTCTGCTCGAGGTCGACCAGATCTATCATCTCGCTTGCCCTGCCTCCCCTGTTCATTACAAATTCAACCCTATGCACAAAACCAATGTGGTGGGGACTCTAAACATGCTGGGTCTCGCAAAGAGGATCGGCGCGCGGTTCTTGCTGACGAGCACCAGCGAGGTGTACGGCGATCCTCTGCAGCACCCGCAGGTTGAAACCTACTGGGGCAACGTTAATCCAATCGGTGTCCGAAGCTGTTACGACGAGGGAAAACGTACGGCCGAGACATTGACCATGGACTACCACAGAGGAGCTGGAGTTGAGGTTAGGATTGCTAGGATTTTTAACACTTACGGGCCAAGAATGTGCATAGATGACGGCCGTGTTGTTAGTAACTTTGTTGCTCAGGCGTTGAGGAAAGAACCGATGACGGTTTATGGTGACGGGAAGCAAACAAGGAGCTTCCAATATGTTTCTGATCTGGTGGAAGGTCTGATGCGTCTGATGGAAGGTGAACATGTGGGACCTTTCAATCTCGGAAACCCGGGTGAATTCACCATGCTCGAACTTGCAAAGGTGGTGCAAGAAACAATCGACCCAGCAGCAAAGATCGAGTATAGGCCGAACACAGAGGATGACCCCCACAAGAGGAAACCTGATATCACAAAGGCTAAAGACTTACTCGGCTGGCAACCAAAGGTGTCCCTTCAAAAGGGTCTCCCTCTCATGGTCTCTGACTTCAGGAAACGCATCTTTGGTGACCACAAGGAAGAAGGCGCTACCACCGCCCTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00520 ko01100 map00520 map01100
Pfam Domains
Protein Families
GDP_Man_Dehyd

Protein Analysis

440

Amino Acids

49.15

Weight (kDa)

8.72

Isoelectric Point (pI)

37.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RmlD_sub_bind PF04321 123 - 377 7.3e-08 RmlD substrate binding domain
Epimerase PF01370 124 - 355 1.9e-44 NAD dependent epimerase/dehydratase family
3Beta_HSD PF01073 125 - 335 1.3e-12 3-beta hydroxysteroid dehydrogenase/isomerase family
GDP_Man_Dehyd PF16363 126 - 416 5.9e-53 GDP-mannose 4,6 dehydratase
NAD_binding_4 PF07993 178 - 289 3e-06 Male sterility protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 534
Acc36I ACCTGC 1 cut(s) 724
AccB1I GGYRCC 1 cut(s) 337
AccB7I CCANNNNNTGG 1 cut(s) 46
AccI GTMKAC 1 cut(s) 558
AccII CGCG 2 cut(s) 677, 679
AccIII TCCGGA 1 cut(s) 366
AciI CCGC 9 cut(s) 50, 97, 192, 216, 330, 384, 679, 731, 1311
AclI AACGTT 1 cut(s) 756
AclWI GGATC 4 cut(s) 377, 409, 677, 710
AcoI YGGCCR 2 cut(s) 804, 904
AcsI RAATTY 3 cut(s) 322, 605, 1076
AcuI CTGAAG 1 cut(s) 1249
AcyI GRCGYC 1 cut(s) 531
AfaI GTAC 5 cut(s) 209, 242, 251, 710, 802
AfiI CCNNNNNNNGG 4 cut(s) 46, 1173, 1237, 1252
AflIII ACRYGT 1 cut(s) 1042
AgsI TTSAA 5 cut(s) 313, 610, 740, 1057, 1235
AleI CACNNNNGTG 1 cut(s) 167
AluBI AGCT 6 cut(s) 13, 318, 517, 780, 839, 987
AluI AGCT 6 cut(s) 13, 318, 517, 780, 839, 987
Alw21I GWGCWC 2 cut(s) 519, 698
Alw26I GTCTC 4 cut(s) 662, 803, 1247, 1261
AlwI GGATC 4 cut(s) 377, 409, 677, 710
Ama87I CYCGRG 3 cut(s) 505, 551, 1069
Aor13HI TCCGGA 1 cut(s) 366
AoxI GGCC 8 cut(s) 84, 273, 288, 387, 804, 881, 904, 1145
ApeKI GCWGC 3 cut(s) 124, 724, 1127
ApoI RAATTY 3 cut(s) 322, 605, 1076
ArsI GACNNNNNNTTYG 2 cut(s) 287, 319
AspLEI GCGC 4 cut(s) 129, 677, 679, 1304
AspS9I GGNCC 6 cut(s) 84, 274, 387, 415, 881, 1049
AsuC2I CCSGG 3 cut(s) 391, 1070, 1071
AsuHPI GGTGA 7 cut(s) 166, 457, 977, 1049, 1072, 1085, 1295
AvaI CYCGRG 3 cut(s) 505, 551, 1069
AvaII GGWCC 2 cut(s) 415, 1049
BaeGI GKGCMC 1 cut(s) 30
BanI GGYRCC 1 cut(s) 337
BanII GRGCYC 2 cut(s) 366, 519
BauI CACGAG 1 cut(s) 143
Bbv12I GWGCWC 2 cut(s) 519, 698
BbvI GCAGC 3 cut(s) 136, 736, 1139
BccI CCATC 1 cut(s) 1024
BceAI ACGGC 6 cut(s) 64, 288, 727, 819, 891, 919
BcgI CGANNNNNNTGC 2 cut(s) 139, 173
BcnI CCSGG 3 cut(s) 391, 1070, 1071
BcoDI GTCTC 4 cut(s) 662, 803, 1247, 1261
BfaI CTAG 1 cut(s) 861
BfmI CTRYAG 1 cut(s) 722
BfoI RGCGCY 2 cut(s) 130, 1305
BfuAI ACCTGC 1 cut(s) 724
BglI GCCNNNNNGGC 1 cut(s) 346
BglII AGATCT 1 cut(s) 564
BisI GCNGC 4 cut(s) 125, 331, 725, 1128
BlsI GCNGC 4 cut(s) 126, 332, 726, 1129
Bme1390I CCNGG 3 cut(s) 391, 1070, 1071
Bme18I GGWCC 2 cut(s) 415, 1049
BmeT110I CYCGRG 3 cut(s) 505, 551, 1069
BmgT120I GGNCC 6 cut(s) 84, 274, 387, 415, 881, 1049
BmiI GGNNCC 4 cut(s) 339, 365, 388, 1050
BmrFI CCNGG 3 cut(s) 391, 1070, 1071
BmrI ACTGGG 1 cut(s) 757
BmsI GCATC 4 cut(s) 415, 477, 1011, 1284
BmuI ACTGGG 1 cut(s) 757
BpmI CTGGAG 1 cut(s) 861
Bpu10I CCTNAGC 1 cut(s) 930
BpuMI CCSGG 3 cut(s) 391, 1070, 1071
BsaHI GRCGYC 1 cut(s) 531
BsaI GGTCTC 3 cut(s) 662, 1247, 1261
BsaJI CCNNGG 5 cut(s) 22, 80, 506, 819, 1069
BsaWI WCCGGW 3 cut(s) 246, 366, 467
BsaXI ACNNNNNCTCC 4 cut(s) 828, 834, 858, 864
Bsc4I CCNNNNNNNGG 4 cut(s) 46, 1173, 1237, 1252
Bse118I RCCGGY 1 cut(s) 286
Bse1I ACTGG 2 cut(s) 385, 752
Bse3DI GCAATG 1 cut(s) 150
BseAI TCCGGA 1 cut(s) 366
BseDI CCNNGG 5 cut(s) 22, 80, 506, 819, 1069
BseGI GGATG 3 cut(s) 138, 519, 1165
BseLI CCNNNNNNNGG 4 cut(s) 46, 1173, 1237, 1252
BseMI GCAATG 1 cut(s) 150
BseMII CTCAG 1 cut(s) 944
BseNI ACTGG 2 cut(s) 385, 752
BsePI GCGCGC 1 cut(s) 675
BseRI GAGGAG 2 cut(s) 170, 849
BseSI GKGCMC 1 cut(s) 30
BseX3I CGGCCG 2 cut(s) 804, 904
BseXI GCAGC 3 cut(s) 136, 736, 1139
BseYI CCCAGC 2 cut(s) 652, 1123
Bsh1236I CGCG 2 cut(s) 677, 679
Bsh1285I CGRYCG 3 cut(s) 298, 807, 907
BshFI GGCC 8 cut(s) 86, 275, 290, 389, 806, 883, 906, 1147
BshNI GGYRCC 1 cut(s) 337
BsiEI CGRYCG 3 cut(s) 298, 807, 907
BsiHKAI GWGCWC 2 cut(s) 519, 698
BsiHKCI CYCGRG 3 cut(s) 505, 551, 1069
BsiSI CCGG 7 cut(s) 247, 287, 367, 390, 468, 523, 1070
BsiWI CGTACG 2 cut(s) 207, 800
BslFI GGGAC 4 cut(s) 209, 652, 1062, 1213
BslI CCNNNNNNNGG 4 cut(s) 46, 1173, 1237, 1252
BsmAI GTCTC 4 cut(s) 662, 803, 1247, 1261
BsmFI GGGAC 4 cut(s) 209, 652, 1062, 1213
BsnI GGCC 8 cut(s) 86, 275, 290, 389, 806, 883, 906, 1147
Bso31I GGTCTC 3 cut(s) 662, 1247, 1261
BsoBI CYCGRG 3 cut(s) 505, 551, 1069
Bsp1286I GDGCHC 4 cut(s) 30, 366, 519, 698
Bsp13I TCCGGA 1 cut(s) 366
Bsp143I GATC 9 cut(s) 228, 369, 401, 444, 564, 669, 715, 1003, 1134
Bsp19I CCATGG 1 cut(s) 819
BspACI CCGC 9 cut(s) 50, 97, 192, 216, 330, 384, 679, 731, 1311
BspANI GGCC 8 cut(s) 86, 275, 290, 389, 806, 883, 906, 1147
BspCNI CTCAG 1 cut(s) 943
BspEI TCCGGA 1 cut(s) 366
BspFNI CGCG 2 cut(s) 677, 679
BspLI GGNNCC 4 cut(s) 339, 365, 388, 1050
BspMAI CTGCAG 1 cut(s) 726
BspMI ACCTGC 1 cut(s) 724
BspPI GGATC 4 cut(s) 377, 409, 677, 710
BspT107I GGYRCC 1 cut(s) 337
BspTNI GGTCTC 3 cut(s) 662, 1247, 1261
BsrDI GCAATG 1 cut(s) 150
BsrFI RCCGGY 1 cut(s) 286
BsrI ACTGG 2 cut(s) 385, 752
BssAI RCCGGY 1 cut(s) 286
BssECI CCNNGG 5 cut(s) 22, 80, 506, 819, 1069
BssHII GCGCGC 1 cut(s) 675
BssMI GATC 9 cut(s) 228, 369, 401, 444, 564, 669, 715, 1003, 1134
BssNI GRCGYC 1 cut(s) 531
BssSI CACGAG 1 cut(s) 143
BssT1I CCWWGG 1 cut(s) 819
Bst2BI CACGAG 1 cut(s) 143
Bst4CI ACNGT 4 cut(s) 166, 303, 419, 958
Bst6I CTCTTC 1 cut(s) 549
BstACI GRCGYC 1 cut(s) 531
BstC8I GCNNGC 5 cut(s) 214, 288, 580, 677, 1214
BstDEI CTNAG 1 cut(s) 930
BstDSI CCRYGG 2 cut(s) 80, 819
BstEII GGTNACC 1 cut(s) 1283
BstENI CCTNNNNNAGG 1 cut(s) 1235
BstF5I GGATG 3 cut(s) 138, 519, 1165
BstFNI CGCG 2 cut(s) 677, 679
BstH2I RGCGCY 2 cut(s) 130, 1305
BstHHI GCGC 4 cut(s) 129, 677, 679, 1304
BstKTI GATC 9 cut(s) 231, 372, 404, 447, 567, 672, 718, 1006, 1137
BstMAI GTCTC 4 cut(s) 662, 803, 1247, 1261
BstMBI GATC 9 cut(s) 228, 369, 401, 444, 564, 669, 715, 1003, 1134
BstMCI CGRYCG 3 cut(s) 298, 807, 907
BstMWI GCNNNNNNNGC 8 cut(s) 121, 346, 523, 547, 584, 685, 730, 1310
BstNSI RCATGY 2 cut(s) 652, 1046
BstPI GGTNACC 1 cut(s) 1283
BstSCI CCNGG 3 cut(s) 389, 1068, 1069
BstSFI CTRYAG 1 cut(s) 722
BstSLI GKGCMC 1 cut(s) 30
BstUI CGCG 2 cut(s) 677, 679
BstV1I GCAGC 3 cut(s) 136, 736, 1139
BstX2I RGATCY 1 cut(s) 564
BstXI CCANNNNNNTGG 2 cut(s) 81, 634
BstYI RGATCY 1 cut(s) 564
BstZI CGGCCG 2 cut(s) 804, 904
BsuRI GGCC 8 cut(s) 86, 275, 290, 389, 806, 883, 906, 1147
BtgI CCRYGG 2 cut(s) 80, 819
BtsCI GGATG 3 cut(s) 138, 519, 1165
BveI ACCTGC 1 cut(s) 724
Cac8I GCNNGC 5 cut(s) 214, 288, 580, 677, 1214
CfoI GCGC 4 cut(s) 129, 677, 679, 1304
Cfr10I RCCGGY 1 cut(s) 286
Cfr13I GGNCC 6 cut(s) 84, 274, 387, 415, 881, 1049
Cfr9I CCCGGG 1 cut(s) 1069
CseI GACGC 1 cut(s) 1013
Csp6I GTAC 5 cut(s) 208, 241, 250, 709, 801
CviAII CATG 5 cut(s) 649, 820, 1043, 1084, 1252
CviQI GTAC 5 cut(s) 208, 241, 250, 709, 801
DdeI CTNAG 1 cut(s) 930
DpnI GATC 9 cut(s) 230, 371, 403, 446, 566, 671, 717, 1005, 1136
DpnII GATC 9 cut(s) 228, 369, 401, 444, 564, 669, 715, 1003, 1134
EaeI YGGCCR 2 cut(s) 804, 904
EagI CGGCCG 2 cut(s) 804, 904
Eam1104I CTCTTC 1 cut(s) 549
EarI CTCTTC 1 cut(s) 549
EciI GGCGGA 2 cut(s) 65, 181
Ecl136II GAGCTC 1 cut(s) 517
EclXI CGGCCG 2 cut(s) 804, 904
Eco130I CCWWGG 1 cut(s) 819
Eco24I GRGCYC 2 cut(s) 366, 519
Eco31I GGTCTC 3 cut(s) 662, 1247, 1261
Eco32I GATATC 1 cut(s) 1186
Eco47I GGWCC 2 cut(s) 415, 1049
Eco52I CGGCCG 2 cut(s) 804, 904
Eco53kI GAGCTC 1 cut(s) 517
Eco57I CTGAAG 1 cut(s) 1249
Eco88I CYCGRG 3 cut(s) 505, 551, 1069
Eco91I GGTNACC 1 cut(s) 1283
EcoICRI GAGCTC 1 cut(s) 517
EcoNI CCTNNNNNAGG 1 cut(s) 1235
EcoO109I RGGNCCY 1 cut(s) 1049
EcoO65I GGTNACC 1 cut(s) 1283
EcoRI GAATTC 2 cut(s) 322, 1076
EcoRV GATATC 1 cut(s) 1186
EcoT14I CCWWGG 1 cut(s) 819
EcoT38I GRGCYC 2 cut(s) 366, 519
ErhI CCWWGG 1 cut(s) 819
FaeI CATG 5 cut(s) 652, 823, 1046, 1087, 1255
FaqI GGGAC 4 cut(s) 209, 652, 1062, 1213
FatI CATG 5 cut(s) 648, 819, 1042, 1083, 1251
FauI CCCGC 3 cut(s) 104, 377, 738
FblI GTMKAC 1 cut(s) 558
Fnu4HI GCNGC 4 cut(s) 125, 331, 725, 1128
FokI GGATG 3 cut(s) 125, 506, 1172
FriOI GRGCYC 2 cut(s) 366, 519
Fsp4HI GCNGC 4 cut(s) 125, 331, 725, 1128
FspBI CTAG 1 cut(s) 861
GlaI GCGC 4 cut(s) 128, 676, 678, 1303
GluI GCNGC 4 cut(s) 125, 331, 725, 1128
GsaI CCCAGC 2 cut(s) 656, 1127
GsuI CTGGAG 1 cut(s) 861
HaeII RGCGCY 2 cut(s) 130, 1305
HaeIII GGCC 8 cut(s) 86, 275, 290, 389, 806, 883, 906, 1147
HapII CCGG 7 cut(s) 247, 287, 367, 390, 468, 523, 1070
HgaI GACGC 1 cut(s) 1013
HhaI GCGC 4 cut(s) 129, 677, 679, 1304
Hin1I GRCGYC 1 cut(s) 531
Hin1II CATG 5 cut(s) 652, 823, 1046, 1087, 1255
Hin6I GCGC 4 cut(s) 127, 675, 677, 1302
HinP1I GCGC 4 cut(s) 127, 675, 677, 1302
HincII GTYRAC 1 cut(s) 559
HindII GTYRAC 1 cut(s) 559
HinfI GANTC 3 cut(s) 103, 260, 640
HpaII CCGG 7 cut(s) 247, 287, 367, 390, 468, 523, 1070
HphI GGTGA 7 cut(s) 166, 457, 977, 1049, 1072, 1085, 1295
Hpy166II GTNNAC 6 cut(s) 174, 415, 454, 559, 709, 1040
Hpy188III TCNNGA 5 cut(s) 226, 232, 367, 376, 1267
Hpy8I GTNNAC 6 cut(s) 174, 415, 454, 559, 709, 1040
Hpy99I CGWCG 8 cut(s) 268, 274, 303, 377, 401, 533, 536, 791
HpyAV CCTTC 6 cut(s) 465, 469, 1007, 1028, 1241, 1292
HpyCH4III ACNGT 4 cut(s) 166, 303, 419, 958
HpyCH4IV ACGT 5 cut(s) 222, 243, 531, 756, 799
HpyCH4V TGCA 6 cut(s) 490, 619, 724, 894, 1097, 1108
HpyF10VI GCNNNNNNNGC 8 cut(s) 121, 346, 523, 547, 584, 685, 730, 1310
HpyF3I CTNAG 1 cut(s) 930
HpySE526I ACGT 5 cut(s) 222, 243, 531, 756, 799
Hsp92I GRCGYC 1 cut(s) 531
Hsp92II CATG 5 cut(s) 652, 823, 1046, 1087, 1255
HspAI GCGC 4 cut(s) 127, 675, 677, 1302
Kpn2I TCCGGA 1 cut(s) 366
KroI GCCGGC 1 cut(s) 286
KroNI GCCGGC 1 cut(s) 288
Kzo9I GATC 9 cut(s) 228, 369, 401, 444, 564, 669, 715, 1003, 1134
LmnI GCTCC 5 cut(s) 10, 120, 369, 836, 984
Lsp1109I GCAGC 3 cut(s) 136, 736, 1139
LweI GCATC 4 cut(s) 415, 477, 1011, 1284
MaeI CTAG 1 cut(s) 861
MaeII ACGT 5 cut(s) 222, 243, 531, 756, 799
MaeIII GTNAC 7 cut(s) 91, 218, 376, 782, 917, 965, 1283
MalI GATC 9 cut(s) 230, 371, 403, 446, 566, 671, 717, 1005, 1136
MboI GATC 9 cut(s) 228, 369, 401, 444, 564, 669, 715, 1003, 1134
MboII GAAGA 3 cut(s) 454, 536, 1307
MflI RGATCY 1 cut(s) 564
MhlI GDGCHC 4 cut(s) 30, 366, 519, 698
MluCI AATT 4 cut(s) 322, 457, 605, 1076
MlyI GAGTC 1 cut(s) 634
MmeI TCCRAC 1 cut(s) 379
MroI TCCGGA 1 cut(s) 366
MroNI GCCGGC 1 cut(s) 286
MseI TTAA 2 cut(s) 759, 870
MslI CAYNNNNRTG 2 cut(s) 143, 167
MspA1I CMGCKG 2 cut(s) 216, 318
MspI CCGG 7 cut(s) 247, 287, 367, 390, 468, 523, 1070
MspR9I CCNGG 3 cut(s) 391, 1070, 1071
MvnI CGCG 2 cut(s) 677, 679
MwoI GCNNNNNNNGC 8 cut(s) 121, 346, 523, 547, 584, 685, 730, 1310
NaeI GCCGGC 1 cut(s) 288
NciI CCSGG 3 cut(s) 391, 1070, 1071
NcoI CCATGG 1 cut(s) 819
NdeII GATC 9 cut(s) 228, 369, 401, 444, 564, 669, 715, 1003, 1134
NgoMIV GCCGGC 1 cut(s) 286
NlaIII CATG 5 cut(s) 652, 823, 1046, 1087, 1255
NlaIV GGNNCC 4 cut(s) 339, 365, 388, 1050
NmeAIII GCCGAG 2 cut(s) 832, 1188
NmuCI GTSAC 4 cut(s) 91, 376, 965, 1283
NspI RCATGY 2 cut(s) 652, 1046
OliI CACNNNNGTG 1 cut(s) 167
PaeR7I CTCGAG 1 cut(s) 551
PauI GCGCGC 1 cut(s) 675
PciI ACATGT 1 cut(s) 1042
PcsI WCGNNNNNNNCGW 1 cut(s) 249
PdiI GCCGGC 1 cut(s) 288
PfeI GAWTC 2 cut(s) 103, 260
Pfl23II CGTACG 2 cut(s) 207, 800
PflMI CCANNNNNTGG 1 cut(s) 46
PkrI GCNGC 4 cut(s) 126, 332, 726, 1129
PleI GAGTC 1 cut(s) 634
PpsI GAGTC 1 cut(s) 634
PpuMI RGGWCCY 1 cut(s) 1049
PscI ACATGT 1 cut(s) 1042
Psp124BI GAGCTC 1 cut(s) 519
Psp1406I AACGTT 1 cut(s) 756
Psp5II RGGWCCY 1 cut(s) 1049
PspEI GGTNACC 1 cut(s) 1283
PspFI CCCAGC 2 cut(s) 652, 1123
PspLI CGTACG 2 cut(s) 207, 800
PspN4I GGNNCC 4 cut(s) 339, 365, 388, 1050
PspPI GGNCC 6 cut(s) 84, 274, 387, 415, 881, 1049
PspPPI RGGWCCY 1 cut(s) 1049
PspXI VCTCGAGB 1 cut(s) 551
PstI CTGCAG 1 cut(s) 726
PsuI RGATCY 1 cut(s) 564
PteI GCGCGC 1 cut(s) 675
PvuII CAGCTG 1 cut(s) 318
RsaI GTAC 5 cut(s) 209, 242, 251, 710, 802
RsaNI GTAC 5 cut(s) 208, 241, 250, 709, 801
RseI CAYNNNNRTG 2 cut(s) 143, 167
SacI GAGCTC 1 cut(s) 519
SalI GTCGAC 1 cut(s) 557
SaqAI TTAA 2 cut(s) 759, 870
SatI GCNGC 4 cut(s) 125, 331, 725, 1128
Sau3AI GATC 9 cut(s) 228, 369, 401, 444, 564, 669, 715, 1003, 1134
Sau96I GGNCC 6 cut(s) 84, 274, 387, 415, 881, 1049
SchI GAGTC 1 cut(s) 634
ScrFI CCNGG 3 cut(s) 391, 1070, 1071
SduI GDGCHC 4 cut(s) 30, 366, 519, 698
SfaNI GCATC 4 cut(s) 415, 477, 1011, 1284
SfcI CTRYAG 1 cut(s) 722
Sfr274I CTCGAG 1 cut(s) 551
SinI GGWCC 2 cut(s) 415, 1049
SlaI CTCGAG 1 cut(s) 551
SmaI CCCGGG 1 cut(s) 1071
SmiMI CAYNNNNRTG 2 cut(s) 143, 167
SmlI CTYRAG 1 cut(s) 551
SmoI CTYRAG 1 cut(s) 551
Sse9I AATT 4 cut(s) 322, 457, 605, 1076
SsiI CCGC 9 cut(s) 50, 97, 192, 216, 330, 384, 679, 731, 1311
SspMI CTAG 1 cut(s) 861
SstI GAGCTC 1 cut(s) 519
StyD4I CCNGG 3 cut(s) 389, 1068, 1069
StyI CCWWGG 1 cut(s) 819
TaaI ACNGT 4 cut(s) 166, 303, 419, 958
TaiI ACGT 5 cut(s) 225, 246, 534, 759, 802
TaqI TCGA 8 cut(s) 233, 258, 513, 552, 558, 1089, 1119, 1137
TaqII GACCGA 1 cut(s) 312
TasI AATT 4 cut(s) 322, 457, 605, 1076
TauI GCSGC 1 cut(s) 333
TfiI GAWTC 2 cut(s) 103, 260
Tru1I TTAA 2 cut(s) 759, 870
Tru9I TTAA 2 cut(s) 759, 870
TseFI GTSAC 4 cut(s) 91, 376, 965, 1283
TseI GCWGC 3 cut(s) 124, 724, 1127
Tsp45I GTSAC 4 cut(s) 91, 376, 965, 1283
TspDTI ATGAA 2 cut(s) 127, 587
TspGWI ACGGA 2 cut(s) 79, 195
TspMI CCCGGG 1 cut(s) 1069
Van91I CCANNNNNTGG 1 cut(s) 46
VpaK11BI GGWCC 2 cut(s) 415, 1049
XagI CCTNNNNNAGG 1 cut(s) 1235
XapI RAATTY 3 cut(s) 322, 605, 1076
XceI RCATGY 2 cut(s) 652, 1046
XcmI CCANNNNNNNNNTGG 1 cut(s) 836
XhoI CTCGAG 1 cut(s) 551
XmaI CCCGGG 1 cut(s) 1069
XmiI GTMKAC 1 cut(s) 558
XspI CTAG 1 cut(s) 861
ZraI GACGTC 1 cut(s) 532
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.