Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0002167

Physical Location & Seq

Genomic Coordinates Forward (+)

45901740 .. 45904240

Gene Structure 2501 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00364720.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1323 bp

ATGAACTCCGATCAGTTAGTTCATAGAACCCACCACACCCACAATGAAGACCTACAAGACACCCCCATCCTCGAATCAACCCCGCAAAACAAGCCTCGTAACCTCTCCACCAACCCAATCCGCTACATGCTTCGCGAGCAACGCATCCTTTTCGTCCTCATCGGCATTGCCATCGCCACCCTCTTCTTCACCGCCTTCCCCTTATCAAACCCAGAGCTAGCATCCTCGCTATCTTCCCCGCTCCTCCATGACCCGACCCGAGACTCGAGTTTCTCGTCCGGGTCTTCTGTCGTGCCGACCCGGCGGGTTCTGTTGGAGGGTCTCGAGTCGATGAATGTGGGCGGGAAAGTGCCGCTGGGGTTGAAATCGAAGAGCCAGAGGATCGTGGTGACGGGTGGGGCCGGGTTCGTGGGGAGCCACCTTGTGGACCGTCTGATTGCGAGAGGGGACAGTGTGATCGTCATTGATAATTTCTTTACGGGTCGGAAAGAGAACCTGGCGCACCATTTCGGAAACCCCAAGTTTGAGCTCATCAGACACGACGTCGTTGAGCCGATTCTGTTGGAGGTTGACCAAATCTACCACTTGGCCTGCCCTGCCTCTCCTGTGCATTACAAGTTTAATCCGACGAATGTGGTGGGCACATTGAACATGCTTGGACTAGCCAAAAGGGTGGGTGCACGCTTCTTGCTCACAAGCACCAGTGAGGTCTACGGTGACCCTCTGCAGCATCCCCAGGTTGAGACCTACTGGGGCAATGTCAACCCCATCGGTGTAAGGAGTTGTTATGATGAGGGAAAGCGCACAGCAGAGACATTGAGCATGGACTATCATAGAGGCCTTGGCATTGAGGTGAGAATTGCCAGAATTTTCAATACTTACGGACCACGAATGTGCATTGATGATGGCCGTGTTGTTAGCAATTTTGTAGCTCAGGCATTAAGGAAGGAGCCATTAACAGTTTATGGTGATGGCAAGCAAACCAGAAGTTTCCAATACGTTTCTGACTTGGTGGAGGGACTAATGCGGCTGATGGAAGGGAATCATGTAGGACCTTTCAATCTTGGAAATCCTGGTGAATTCACCATGCTAGAACTTGCTCAGGTTGTACAAGACACCATAGACCCCAATGCAAAGATAGAGTTCAGGCCAAACACAGAAGATGACCCCCATAAGAGGAAGCCAGACATTTCAAAGGCAAAAGAGCTTCTCGGATGGGAGCCTACTGTGTCTCTCAGAAAGGGACTTCCTCTCATGGTCACTGACTTTAGACAGCGCATATTTGGCGATGCCAAGGACAACATTGCAGCTGAGGCAGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0008150 GO:0009987 GO:0016043 GO:0016829 GO:0016830 GO:0016831 GO:0022607 GO:0036094 GO:0042802 GO:0042803 GO:0043167 GO:0043168 GO:0043933 GO:0044085 GO:0044424 GO:0044464 GO:0046983 GO:0048037 GO:0048040 GO:0050662 GO:0051259 GO:0051262 GO:0051287 GO:0065003 GO:0070403 GO:0071840 GO:0097159 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00520 ko01100 map00520 map01100

Pfam Domains

Protein Families

GDP_Man_Dehyd

Protein Analysis

440

Amino Acids

48.98

Weight (kDa)

6.74

Isoelectric Point (pI)

34.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RmlD_sub_bind	PF04321	127 - 385	1.9e-06	RmlD substrate binding domain
Epimerase	PF01370	128 - 356	1.3e-42	NAD dependent epimerase/dehydratase family
3Beta_HSD	PF01073	129 - 275	1.8e-10	3-beta hydroxysteroid dehydrogenase/isomerase family
GDP_Man_Dehyd	PF16363	130 - 417	1.8e-50	GDP-mannose 4,6 dehydratase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002167)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47650 AT2G47650 AT3G62830 AT3G62830
fragaria_vesca	FvH4_2g25720 FvH4_2g25720 FvH4_2g25720 FvH4_4g18410
malus_domestica	MD00G1128000.v1.1 MD03G1288200.v1.1 MD11G1309900.v1.1 MD16G1167000.v1.1
prunus_persica	Prupe.1G134000_v2.0.a1 Prupe.8G261400_v2.0.a1 Prupe.8G261400_v2.0.a1
pyrus_communis	pycom16g14100
rosa_chinensis	RchiOBHm_Chr4g0422861 RchiOBHm_Chr6g0294001 RchiOBHm_Chr6g0294011
rosa_laevigata	RLG00000007599 RLG00000011908
rosa_multiflora	Rmu_co8291503.1_g000001 Rmu_sc0000830.1_g000041 Rmu_sc0002321.1_g000009 Rmu_sc0003941.1_g000011 Rmu_sc0004849.1_g000008 Rmu_sc0005126.1_g000004 Rmu_sc0007876.1_g000002
rosa_roxburghii	Rroxscaffold_5G00364720 Rroxscaffold_7G00173730
rosa_rugosa	Rorug04G0181900 Rorug06G0240000
rosa_samantha	Rh4AG242300 Rh4BG245900 Rh4CG256200 Rh4DG240900 Rh6AG353100 Rh6BG360000 Rh6CG367300 Rh6DG353700 Rh6DG353800
rosa_wichuraiana	Rw4G020870 Rw6G030760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	546
AccB7I	CCANNNNNTGG	1 cut(s)	424
AccBSI	CCGCTC	1 cut(s)	241
AccI	GTMKAC	1 cut(s)	711
AccII	CGCG	1 cut(s)	135
AciI	CCGC	8 cut(s)	83, 121, 192, 239, 304, 342, 353, 1027
AclWI	GGATC	1 cut(s)	389
AcoI	YGGCCR	1 cut(s)	907
AcsI	RAATTY	2 cut(s)	867, 1079
AcyI	GRCGYC	1 cut(s)	543
AdeI	CACNNNGTG	1 cut(s)	424
AfaI	GTAC	1 cut(s)	1110
AfiI	CCNNNNNNNGG	2 cut(s)	424, 1176
AgsI	TTSAA	5 cut(s)	364, 649, 874, 1060, 1194
AhdI	GACNNNNNGTC	1 cut(s)	542
AjnI	CCWGG	3 cut(s)	495, 735, 1072
AleI	CACNNNNGTG	1 cut(s)	892
AluBI	AGCT	6 cut(s)	217, 529, 932, 1207, 1310, 1319
AluI	AGCT	6 cut(s)	217, 529, 932, 1207, 1310, 1319
Alw21I	GWGCWC	2 cut(s)	531, 682
Alw26I	GTCTC	5 cut(s)	255, 326, 737, 806, 1236
Alw44I	GTGCAC	1 cut(s)	678
AlwI	GGATC	1 cut(s)	389
Ama87I	CYCGRG	3 cut(s)	258, 265, 323
AoxI	GGCC	5 cut(s)	399, 588, 838, 907, 1148
ApaLI	GTGCAC	1 cut(s)	678
ApeKI	GCWGC	3 cut(s)	727, 1307, 1316
ApoI	RAATTY	2 cut(s)	867, 1079
AspLEI	GCGC	3 cut(s)	502, 804, 1278
AspS9I	GGNCC	4 cut(s)	399, 427, 884, 1052
AsuC2I	CCSGG	3 cut(s)	280, 301, 403
AsuHPI	GGTGA	7 cut(s)	181, 400, 728, 865, 980, 1075, 1088
AsuNHI	GCTAGC	1 cut(s)	217
AvaI	CYCGRG	3 cut(s)	258, 265, 323
AvaII	GGWCC	3 cut(s)	427, 884, 1052
BaeGI	GKGCMC	2 cut(s)	644, 682
BanII	GRGCYC	1 cut(s)	531
BbsI	GAAGAC	2 cut(s)	54, 276
Bbv12I	GWGCWC	2 cut(s)	531, 682
BbvCI	CCTCAGC	1 cut(s)	1311
BbvI	GCAGC	2 cut(s)	739, 1319
BccI	CCATC	7 cut(s)	74, 179, 776, 899, 965, 1027, 1209
BceAI	ACGGC	1 cut(s)	894
BcgI	CGANNNNNNTGC	4 cut(s)	133, 154, 167, 188
BciT130I	CCWGG	3 cut(s)	497, 737, 1074
BcnI	CCSGG	3 cut(s)	280, 301, 403
BcoDI	GTCTC	5 cut(s)	255, 326, 737, 806, 1236
BfaI	CTAG	3 cut(s)	218, 662, 1091
BfmI	CTRYAG	1 cut(s)	725
BglI	GCCNNNNNGGC	1 cut(s)	301
BisI	GCNGC	5 cut(s)	353, 728, 1028, 1308, 1317
BlsI	GCNGC	5 cut(s)	354, 729, 1029, 1309, 1318
Bme1390I	CCNGG	6 cut(s)	280, 301, 403, 497, 737, 1074
Bme18I	GGWCC	3 cut(s)	427, 884, 1052
BmeRI	GACNNNNNGTC	1 cut(s)	542
BmeT110I	CYCGRG	3 cut(s)	258, 265, 323
BmgT120I	GGNCC	4 cut(s)	399, 427, 884, 1052
BmiI	GGNNCC	4 cut(s)	400, 416, 951, 1221
BmrFI	CCNGG	6 cut(s)	280, 301, 403, 497, 737, 1074
BmrI	ACTGGG	1 cut(s)	760
BmsI	GCATC	4 cut(s)	153, 230, 739, 1279
BmtI	GCTAGC	1 cut(s)	221
BmuI	ACTGGG	1 cut(s)	760
BpiI	GAAGAC	2 cut(s)	54, 276
Bpu10I	CCTNAGC	3 cut(s)	933, 1101, 1311
BpuMI	CCSGG	3 cut(s)	280, 301, 403
BsaHI	GRCGYC	1 cut(s)	543
BsaI	GGTCTC	2 cut(s)	326, 737
BsaJI	CCNNGG	3 cut(s)	735, 841, 1293
Bsc4I	CCNNNNNNNGG	2 cut(s)	424, 1176
Bse1I	ACTGG	2 cut(s)	702, 755
Bse3DI	GCAATG	3 cut(s)	165, 763, 1302
BseBI	CCWGG	3 cut(s)	497, 737, 1074
BseDI	CCNNGG	3 cut(s)	735, 841, 1293
BseGI	GGATG	5 cut(s)	66, 144, 221, 730, 1220
BseLI	CCNNNNNNNGG	2 cut(s)	424, 1176
BseMI	GCAATG	3 cut(s)	165, 763, 1302
BseMII	CTCAG	4 cut(s)	947, 1115, 1249, 1302
BseNI	ACTGG	2 cut(s)	702, 755
BseRI	GAGGAG	1 cut(s)	233
BseSI	GKGCMC	2 cut(s)	644, 682
BseXI	GCAGC	2 cut(s)	739, 1319
BseYI	CCCAGC	1 cut(s)	355
Bsh1236I	CGCG	1 cut(s)	135
BshFI	GGCC	5 cut(s)	401, 590, 840, 909, 1150
BsiHKAI	GWGCWC	2 cut(s)	531, 682
BsiHKCI	CYCGRG	3 cut(s)	258, 265, 323
BsiSI	CCGG	3 cut(s)	279, 301, 402
BslFI	GGGAC	3 cut(s)	461, 1032, 1257
BslI	CCNNNNNNNGG	2 cut(s)	424, 1176
BsmAI	GTCTC	5 cut(s)	255, 326, 737, 806, 1236
BsmFI	GGGAC	3 cut(s)	461, 1032, 1257
BsnI	GGCC	5 cut(s)	401, 590, 840, 909, 1150
Bso31I	GGTCTC	2 cut(s)	326, 737
BsoBI	CYCGRG	3 cut(s)	258, 265, 323
Bsp1286I	GDGCHC	3 cut(s)	531, 644, 682
Bsp1407I	TGTACA	1 cut(s)	1108
Bsp143I	GATC	3 cut(s)	10, 381, 456
Bsp68I	TCGCGA	1 cut(s)	135
BspACI	CCGC	8 cut(s)	83, 121, 192, 239, 304, 342, 353, 1027
BspANI	GGCC	5 cut(s)	401, 590, 840, 909, 1150
BspCNI	CTCAG	4 cut(s)	946, 1114, 1248, 1303
BspFNI	CGCG	1 cut(s)	135
BspLI	GGNNCC	4 cut(s)	400, 416, 951, 1221
BspMAI	CTGCAG	1 cut(s)	729
BspOI	GCTAGC	1 cut(s)	221
BspPI	GGATC	1 cut(s)	389
BspQI	GCTCTTC	1 cut(s)	365
BspTNI	GGTCTC	2 cut(s)	326, 737
BsrBI	CCGCTC	1 cut(s)	241
BsrDI	GCAATG	3 cut(s)	165, 763, 1302
BsrGI	TGTACA	1 cut(s)	1108
BsrI	ACTGG	2 cut(s)	702, 755
BssECI	CCNNGG	3 cut(s)	735, 841, 1293
BssMI	GATC	3 cut(s)	10, 381, 456
BssNI	GRCGYC	1 cut(s)	543
BssT1I	CCWWGG	2 cut(s)	841, 1293
Bst2UI	CCWGG	3 cut(s)	497, 737, 1074
Bst4CI	ACNGT	5 cut(s)	431, 452, 716, 961, 1228
Bst6I	CTCTTC	2 cut(s)	188, 365
BstACI	GRCGYC	1 cut(s)	543
BstAUI	TGTACA	1 cut(s)	1108
BstC8I	GCNNGC	5 cut(s)	137, 219, 592, 682, 977
BstDEI	CTNAG	4 cut(s)	933, 1101, 1235, 1311
BstEII	GGTNACC	1 cut(s)	716
BstF5I	GGATG	5 cut(s)	66, 144, 221, 730, 1220
BstFNI	CGCG	1 cut(s)	135
BstHHI	GCGC	3 cut(s)	502, 804, 1278
BstKTI	GATC	3 cut(s)	13, 384, 459
BstMAI	GTCTC	5 cut(s)	255, 326, 737, 806, 1236
BstMBI	GATC	3 cut(s)	10, 381, 456
BstMWI	GCNNNNNNNGC	8 cut(s)	91, 136, 141, 301, 596, 1284, 1313, 1316
BstNI	CCWGG	3 cut(s)	497, 737, 1074
BstNSI	RCATGY	2 cut(s)	130, 655
BstPI	GGTNACC	1 cut(s)	716
BstSCI	CCNGG	6 cut(s)	278, 299, 401, 495, 735, 1072
BstSFI	CTRYAG	1 cut(s)	725
BstSLI	GKGCMC	2 cut(s)	644, 682
BstUI	CGCG	1 cut(s)	135
BstV1I	GCAGC	2 cut(s)	739, 1319
BstV2I	GAAGAC	2 cut(s)	54, 276
BstXI	CCANNNNNNTGG	1 cut(s)	673
BsuRI	GGCC	5 cut(s)	401, 590, 840, 909, 1150
BtgZI	GCGATG	2 cut(s)	157, 1302
BtsCI	GGATG	5 cut(s)	66, 144, 221, 730, 1220
BtsIMutI	CAGTG	3 cut(s)	457, 709, 1260
BtuMI	TCGCGA	1 cut(s)	135
Cac8I	GCNNGC	5 cut(s)	137, 219, 592, 682, 977
CfoI	GCGC	3 cut(s)	502, 804, 1278
Cfr13I	GGNCC	4 cut(s)	399, 427, 884, 1052
Csp6I	GTAC	1 cut(s)	1109
CviAII	CATG	7 cut(s)	127, 248, 652, 823, 1046, 1087, 1255
CviQI	GTAC	1 cut(s)	1109
DdeI	CTNAG	4 cut(s)	933, 1101, 1235, 1311
DpnI	GATC	3 cut(s)	12, 383, 458
DpnII	GATC	3 cut(s)	10, 381, 456
DraIII	CACNNNGTG	1 cut(s)	424
DriI	GACNNNNNGTC	1 cut(s)	542
EaeI	YGGCCR	1 cut(s)	907
Eam1104I	CTCTTC	2 cut(s)	188, 365
Eam1105I	GACNNNNNGTC	1 cut(s)	542
EarI	CTCTTC	2 cut(s)	188, 365
Ecl136II	GAGCTC	1 cut(s)	529
Eco130I	CCWWGG	2 cut(s)	841, 1293
Eco147I	AGGCCT	1 cut(s)	840
Eco24I	GRGCYC	1 cut(s)	531
Eco31I	GGTCTC	2 cut(s)	326, 737
Eco47I	GGWCC	3 cut(s)	427, 884, 1052
Eco53kI	GAGCTC	1 cut(s)	529
Eco88I	CYCGRG	3 cut(s)	258, 265, 323
Eco91I	GGTNACC	1 cut(s)	716
EcoICRI	GAGCTC	1 cut(s)	529
EcoO109I	RGGNCCY	1 cut(s)	1052
EcoO65I	GGTNACC	1 cut(s)	716
EcoRI	GAATTC	1 cut(s)	1079
EcoRII	CCWGG	3 cut(s)	495, 735, 1072
EcoT14I	CCWWGG	2 cut(s)	841, 1293
EcoT38I	GRGCYC	1 cut(s)	531
ErhI	CCWWGG	2 cut(s)	841, 1293
FaeI	CATG	7 cut(s)	130, 251, 655, 826, 1049, 1090, 1258
FaqI	GGGAC	3 cut(s)	461, 1032, 1257
FatI	CATG	7 cut(s)	126, 247, 651, 822, 1045, 1086, 1254
FauI	CCCGC	4 cut(s)	90, 246, 297, 335
FblI	GTMKAC	1 cut(s)	711
Fnu4HI	GCNGC	5 cut(s)	353, 728, 1028, 1308, 1317
FokI	GGATG	5 cut(s)	53, 131, 208, 717, 1227
FriOI	GRGCYC	1 cut(s)	531
Fsp4HI	GCNGC	5 cut(s)	353, 728, 1028, 1308, 1317
FspBI	CTAG	3 cut(s)	218, 662, 1091
GlaI	GCGC	3 cut(s)	501, 803, 1277
GluI	GCNGC	5 cut(s)	353, 728, 1028, 1308, 1317
GsaI	CCCAGC	1 cut(s)	359
HaeIII	GGCC	5 cut(s)	401, 590, 840, 909, 1150
HapII	CCGG	3 cut(s)	279, 301, 402
HhaI	GCGC	3 cut(s)	502, 804, 1278
Hin1I	GRCGYC	1 cut(s)	543
Hin1II	CATG	7 cut(s)	130, 251, 655, 826, 1049, 1090, 1258
Hin6I	GCGC	3 cut(s)	500, 802, 1276
HinP1I	GCGC	3 cut(s)	500, 802, 1276
HincII	GTYRAC	2 cut(s)	571, 763
HindII	GTYRAC	2 cut(s)	571, 763
HinfI	GANTC	5 cut(s)	74, 263, 326, 556, 1042
HpaII	CCGG	3 cut(s)	279, 301, 402
HphI	GGTGA	7 cut(s)	181, 400, 728, 865, 980, 1075, 1088
Hpy166II	GTNNAC	5 cut(s)	427, 571, 680, 712, 763
Hpy188I	TCNGA	9 cut(s)	10, 435, 486, 512, 536, 627, 1006, 1214, 1238
Hpy188III	TCNNGA	2 cut(s)	134, 323
Hpy8I	GTNNAC	5 cut(s)	427, 571, 680, 712, 763
Hpy99I	CGWCG	3 cut(s)	545, 548, 631
HpyAV	CCTTC	3 cut(s)	205, 940, 1031
HpyCH4III	ACNGT	5 cut(s)	431, 452, 716, 961, 1228
HpyCH4IV	ACGT	2 cut(s)	543, 999
HpyCH4V	TGCA	6 cut(s)	610, 680, 727, 897, 1133, 1307
HpyF10VI	GCNNNNNNNGC	8 cut(s)	91, 136, 141, 301, 596, 1284, 1313, 1316
HpyF3I	CTNAG	4 cut(s)	933, 1101, 1235, 1311
HpySE526I	ACGT	2 cut(s)	543, 999
Hsp92I	GRCGYC	1 cut(s)	543
Hsp92II	CATG	7 cut(s)	130, 251, 655, 826, 1049, 1090, 1258
HspAI	GCGC	3 cut(s)	500, 802, 1276
Kzo9I	GATC	3 cut(s)	10, 381, 456
LguI	GCTCTTC	1 cut(s)	365
LmnI	GCTCC	4 cut(s)	246, 414, 949, 1219
Lsp1109I	GCAGC	2 cut(s)	739, 1319
LweI	GCATC	4 cut(s)	153, 230, 739, 1279
MaeI	CTAG	3 cut(s)	218, 662, 1091
MaeII	ACGT	2 cut(s)	543, 999
MaeIII	GTNAC	4 cut(s)	98, 388, 716, 1258
MalI	GATC	3 cut(s)	12, 383, 458
MbiI	CCGCTC	1 cut(s)	241
MboI	GATC	3 cut(s)	10, 381, 456
MboII	GAAGA	7 cut(s)	59, 175, 178, 225, 276, 382, 1172
MhlI	GDGCHC	3 cut(s)	531, 644, 682
MluCI	AATT	5 cut(s)	469, 858, 867, 922, 1079
MlyI	GAGTC	2 cut(s)	257, 335
MmeI	TCCRAC	4 cut(s)	294, 464, 543, 650
MseI	TTAA	4 cut(s)	621, 941, 956, 1321
MslI	CAYNNNNRTG	2 cut(s)	851, 892
MspA1I	CMGCKG	2 cut(s)	355, 1310
MspI	CCGG	3 cut(s)	279, 301, 402
MspR9I	CCNGG	6 cut(s)	280, 301, 403, 497, 737, 1074
MvaI	CCWGG	3 cut(s)	497, 737, 1074
MvnI	CGCG	1 cut(s)	135
MwoI	GCNNNNNNNGC	8 cut(s)	91, 136, 141, 301, 596, 1284, 1313, 1316
NciI	CCSGG	3 cut(s)	280, 301, 403
NdeII	GATC	3 cut(s)	10, 381, 456
NheI	GCTAGC	1 cut(s)	217
NlaIII	CATG	7 cut(s)	130, 251, 655, 826, 1049, 1090, 1258
NlaIV	GGNNCC	4 cut(s)	400, 416, 951, 1221
NmuCI	GTSAC	3 cut(s)	388, 716, 1258
NruI	TCGCGA	1 cut(s)	135
NspI	RCATGY	2 cut(s)	130, 655
OliI	CACNNNNGTG	1 cut(s)	892
PaeR7I	CTCGAG	2 cut(s)	265, 323
PceI	AGGCCT	1 cut(s)	840
PciSI	GCTCTTC	1 cut(s)	365
PcsI	WCGNNNNNNNCGW	1 cut(s)	272
PfeI	GAWTC	3 cut(s)	74, 556, 1042
PflMI	CCANNNNNTGG	1 cut(s)	424
PkrI	GCNGC	5 cut(s)	354, 729, 1029, 1309, 1318
PleI	GAGTC	2 cut(s)	257, 334
PpsI	GAGTC	2 cut(s)	257, 334
PpuMI	RGGWCCY	1 cut(s)	1052
Psp124BI	GAGCTC	1 cut(s)	531
Psp5II	RGGWCCY	1 cut(s)	1052
Psp6I	CCWGG	3 cut(s)	495, 735, 1072
PspEI	GGTNACC	1 cut(s)	716
PspFI	CCCAGC	1 cut(s)	355
PspGI	CCWGG	3 cut(s)	495, 735, 1072
PspN4I	GGNNCC	4 cut(s)	400, 416, 951, 1221
PspPI	GGNCC	4 cut(s)	399, 427, 884, 1052
PspPPI	RGGWCCY	1 cut(s)	1052
PspXI	VCTCGAGB	1 cut(s)	265
PstI	CTGCAG	1 cut(s)	729
PvuII	CAGCTG	1 cut(s)	1310
RruI	TCGCGA	1 cut(s)	135
RsaI	GTAC	1 cut(s)	1110
RsaNI	GTAC	1 cut(s)	1109
RseI	CAYNNNNRTG	2 cut(s)	851, 892
SacI	GAGCTC	1 cut(s)	531
SapI	GCTCTTC	1 cut(s)	365
SaqAI	TTAA	4 cut(s)	621, 941, 956, 1321
SatI	GCNGC	5 cut(s)	353, 728, 1028, 1308, 1317
Sau3AI	GATC	3 cut(s)	10, 381, 456
Sau96I	GGNCC	4 cut(s)	399, 427, 884, 1052
SchI	GAGTC	2 cut(s)	257, 335
ScrFI	CCNGG	6 cut(s)	280, 301, 403, 497, 737, 1074
SduI	GDGCHC	3 cut(s)	531, 644, 682
SfaNI	GCATC	4 cut(s)	153, 230, 739, 1279
SfcI	CTRYAG	1 cut(s)	725
Sfr274I	CTCGAG	2 cut(s)	265, 323
SinI	GGWCC	3 cut(s)	427, 884, 1052
SlaI	CTCGAG	2 cut(s)	265, 323
SmiMI	CAYNNNNRTG	2 cut(s)	851, 892
SmlI	CTYRAG	2 cut(s)	265, 323
SmoI	CTYRAG	2 cut(s)	265, 323
Sse9I	AATT	5 cut(s)	469, 858, 867, 922, 1079
SseBI	AGGCCT	1 cut(s)	840
SsiI	CCGC	8 cut(s)	83, 121, 192, 239, 304, 342, 353, 1027
SspMI	CTAG	3 cut(s)	218, 662, 1091
SstI	GAGCTC	1 cut(s)	531
StuI	AGGCCT	1 cut(s)	840
StyD4I	CCNGG	6 cut(s)	278, 299, 401, 495, 735, 1072
StyI	CCWWGG	2 cut(s)	841, 1293
TaaI	ACNGT	5 cut(s)	431, 452, 716, 961, 1228
TaiI	ACGT	2 cut(s)	546, 1002
TaqI	TCGA	5 cut(s)	72, 266, 324, 329, 368
TasI	AATT	5 cut(s)	469, 858, 867, 922, 1079
TatI	WGTACW	1 cut(s)	1108
TauI	GCSGC	2 cut(s)	355, 1030
TfiI	GAWTC	3 cut(s)	74, 556, 1042
Tru1I	TTAA	4 cut(s)	621, 941, 956, 1321
Tru9I	TTAA	4 cut(s)	621, 941, 956, 1321
TscAI	CASTG	3 cut(s)	457, 709, 1267
TseFI	GTSAC	3 cut(s)	388, 716, 1258
TseI	GCWGC	3 cut(s)	727, 1307, 1316
Tsp45I	GTSAC	3 cut(s)	388, 716, 1258
TspDTI	ATGAA	4 cut(s)	11, 17, 60, 347
TspGWI	ACGGA	1 cut(s)	897
TspRI	CASTG	3 cut(s)	457, 709, 1267
Van91I	CCANNNNNTGG	1 cut(s)	424
VneI	GTGCAC	1 cut(s)	678
VpaK11BI	GGWCC	3 cut(s)	427, 884, 1052
XapI	RAATTY	2 cut(s)	867, 1079
XceI	RCATGY	2 cut(s)	130, 655
XhoI	CTCGAG	2 cut(s)	265, 323
XmiI	GTMKAC	1 cut(s)	711
XspI	CTAG	3 cut(s)	218, 662, 1091
ZraI	GACGTC	1 cut(s)	544

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.