Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr00

Orthogroup ID

OG0002167

Physical Location & Seq

Genomic Coordinates Reverse (-)

27190290 .. 27200813

Gene Structure 10524 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD00G1128000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1398 bp

ATGGCCAGCAGCTCCGATAATCTGTCATTAGTTCACAGAACCCACCATAATCAACAAATTGACCAATCACAACCCTTTCTCGAACCACAAACCAACCACAAGCCTCCGCATTCCTCCACCAACCCCATTCGATACATGCTCCGCGAGCAGCGTTTTATCTTCGTCCTCATTGGCGTCGCCATCGCTGTTTTCTTCTTCACCACCTTCCTGGCATCGAACCCACTATTGGAATCCGTTCACGACCCTGGTCTCGAATCCGGATTAGGTTCTGATCGGCCGGGTATTGATCTCCCGGCCAACCCTACCCGGAGGGTGCTGTTGGAGACGTGGAATGTGGGAGGGAAGGTGCCGCTGGGGGTGAGGAAGAAGAACATGAGGATTGTTGTGACGGGTGGGGCCGGGTTCGTGGGGAGCCACCTCGTGGACCGTCTGATCGCGAGAGGGGACAGCGTGATCGTGCTGGATAATTTTTTTACCGGGAGGAAGGAGAACTTGGCGCACCACTTCGGGAACCCGAAGTTCGAGCTGATTCGACACGACGTGGTCGAGCCGATATTGTTGGAGGTTGACCAGATCTACCACCTCGCTTGCCCGGCATCCCCGGTGCATTACAAGTTCAATCCGGTCAAGACAATTATATCCTTTCTTCTCTTGTTTCTATTTTTATTTCTTGTGCTTATACGCATGCTGGGGTTTCACAAGACAAATGTGGTGGGAACACTGAACATGCTTGGACTAGCAAAAAGGGTTGGTGCACGCTTCTTGCTGACAAGCACCAGTGAGGTTTACGGTGACCCTTTGCAGCACCCTCAGGTCGAGTCCTACTGGGGTAATGTCAACCCCATCGGTGTAAGGAGCTGCTACGATGAGGGAAAACGCACAGCAGAGACTCTGACCATGGACTACCACAGAGGCCTTGGCATTGAGGTGAGGATTGCTCGGATTTTCAACACTTATGGACCGCGTATGTGCATCGATGATGGTCGTGTTGTTAGCAATTTCGTAGCTCAGGCATTAAGGAAGGAGCCATTGACAGTTTATGGAGATGGCAAGCAAACCCGAAGTTTCCAATACGTTTCTGACTTGGTCGAGGGTCTAATGCGGCTGATGGAAGGAAATCATGTAGGCCCTTTCAACCTTGGCAACCCTGGCGAATTCACCATGCTAGAACTTGCCCAGGTTGTGCAAGACACAATAGATCCAAATGCAAAGATAGAGTTCAGGCCCAACACAGAGGACGACCCACACAAGAGGAAGCCGGACATTTCCAAGGCTAAGGAGCTTCTGGGGTGGGAGCCCACCGTGTCCCTCCGCAAGGGGCTGCCGCTCATGGTTACAGACTTCAGGCAGCGTATTTTTGGTGACTCTAAGGATAGAGATGCAGGCTCCGCTATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0008150 GO:0009987 GO:0016043 GO:0016829 GO:0016830 GO:0016831 GO:0022607 GO:0036094 GO:0042802 GO:0042803 GO:0043167 GO:0043168 GO:0043933 GO:0044085 GO:0044424 GO:0044464 GO:0046983 GO:0048037 GO:0048040 GO:0050662 GO:0051259 GO:0051262 GO:0051287 GO:0065003 GO:0070403 GO:0071840 GO:0097159 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00520 ko01100 map00520 map01100

Pfam Domains

Protein Families

GDP_Man_Dehyd

Protein Analysis

466

Amino Acids

52.19

Weight (kDa)

8.61

Isoelectric Point (pI)

32.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Epimerase	PF01370	127 - 203	4.8e-10	NAD dependent epimerase/dehydratase family
GDP_Man_Dehyd	PF16363	129 - 212	2.4e-10	GDP-mannose 4,6 dehydratase
Epimerase	PF01370	231 - 381	3.2e-29	NAD dependent epimerase/dehydratase family
GDP_Man_Dehyd	PF16363	232 - 442	1e-36	GDP-mannose 4,6 dehydratase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002167)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47650 AT2G47650 AT3G62830 AT3G62830
fragaria_vesca	FvH4_2g25720 FvH4_2g25720 FvH4_2g25720 FvH4_4g18410
malus_domestica	MD00G1128000.v1.1 MD03G1288200.v1.1 MD11G1309900.v1.1 MD16G1167000.v1.1
prunus_persica	Prupe.1G134000_v2.0.a1 Prupe.8G261400_v2.0.a1 Prupe.8G261400_v2.0.a1
pyrus_communis	pycom16g14100
rosa_chinensis	RchiOBHm_Chr4g0422861 RchiOBHm_Chr6g0294001 RchiOBHm_Chr6g0294011
rosa_laevigata	RLG00000007599 RLG00000011908
rosa_multiflora	Rmu_co8291503.1_g000001 Rmu_sc0000830.1_g000041 Rmu_sc0002321.1_g000009 Rmu_sc0003941.1_g000011 Rmu_sc0004849.1_g000008 Rmu_sc0005126.1_g000004 Rmu_sc0007876.1_g000002
rosa_roxburghii	Rroxscaffold_5G00364720 Rroxscaffold_7G00173730
rosa_rugosa	Rorug04G0181900 Rorug06G0240000
rosa_samantha	Rh4AG242300 Rh4BG245900 Rh4CG256200 Rh4DG240900 Rh6AG353100 Rh6BG360000 Rh6CG367300 Rh6DG353700 Rh6DG353800
rosa_wichuraiana	Rw4G020870 Rw6G030760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	346
AccB7I	CCANNNNNTGG	1 cut(s)	421
AccBSI	CCGCTC	1 cut(s)	1327
AccII	CGCG	3 cut(s)	144, 437, 964
AccIII	TCCGGA	1 cut(s)	257
AciI	CCGC	8 cut(s)	107, 142, 350, 962, 1102, 1312, 1325, 1389
AclWI	GGATC	1 cut(s)	1193
AcoI	YGGCCR	3 cut(s)	3, 275, 294
AcsI	RAATTY	1 cut(s)	1154
AcuI	CTGAAG	1 cut(s)	1327
AcyI	GRCGYC	1 cut(s)	174
AdeI	CACNNNGTG	2 cut(s)	421, 541
AfiI	CCNNNNNNNGG	3 cut(s)	226, 421, 1315
AgsI	TTSAA	3 cut(s)	619, 949, 1135
AjiI	CACGTC	2 cut(s)	327, 541
AjnI	CCWGG	4 cut(s)	207, 244, 1147, 1176
AjuI	GAANNNNNNNTTGG	4 cut(s)	209, 241, 476, 508
AluBI	AGCT	5 cut(s)	12, 526, 858, 1007, 1282
AluI	AGCT	5 cut(s)	12, 526, 858, 1007, 1282
Alw21I	GWGCWC	1 cut(s)	757
Alw26I	GTCTC	3 cut(s)	254, 317, 881
Alw44I	GTGCAC	1 cut(s)	753
AlwI	GGATC	1 cut(s)	1193
Aor13HI	TCCGGA	1 cut(s)	257
AoxI	GGCC	7 cut(s)	3, 275, 294, 396, 913, 1126, 1223
ApaLI	GTGCAC	1 cut(s)	753
ApeKI	GCWGC	6 cut(s)	9, 148, 802, 858, 1321, 1348
ApoI	RAATTY	1 cut(s)	1154
Asp700I	GAANNNNTTC	1 cut(s)	234
AspLEI	GCGC	1 cut(s)	499
AspS9I	GGNCC	5 cut(s)	396, 424, 959, 1127, 1224
AsuC2I	CCSGG	7 cut(s)	279, 293, 307, 400, 478, 593, 602
AsuHPI	GGTGA	6 cut(s)	190, 370, 803, 940, 1150, 1373
AvaII	GGWCC	2 cut(s)	424, 959
AxyI	CCTNAGG	1 cut(s)	810
BaeGI	GKGCMC	1 cut(s)	757
BalI	TGGCCA	1 cut(s)	5
BanI	GGYRCC	1 cut(s)	346
BanII	GRGCYC	1 cut(s)	1299
BauI	CACGAG	1 cut(s)	419
Bbv12I	GWGCWC	1 cut(s)	757
BbvI	GCAGC	6 cut(s)	21, 160, 814, 845, 1308, 1360
BccI	CCATC	5 cut(s)	188, 851, 974, 1040, 1102
BciT130I	CCWGG	4 cut(s)	209, 246, 1149, 1178
BcnI	CCSGG	7 cut(s)	279, 293, 307, 400, 478, 593, 602
BcoDI	GTCTC	3 cut(s)	254, 317, 881
BfaI	CTAG	2 cut(s)	737, 1166
BglII	AGATCT	1 cut(s)	573
BisI	GCNGC	9 cut(s)	10, 149, 350, 803, 859, 1103, 1322, 1325, 1349
BlsI	GCNGC	9 cut(s)	11, 150, 351, 804, 860, 1104, 1323, 1326, 1350
Bme18I	GGWCC	2 cut(s)	424, 959
BmgBI	CACGTC	2 cut(s)	327, 541
BmgT120I	GGNCC	5 cut(s)	396, 424, 959, 1127, 1224
BmiI	GGNNCC	7 cut(s)	348, 397, 413, 512, 1026, 1296, 1387
BmrI	ACTGGG	1 cut(s)	835
BmsI	GCATC	4 cut(s)	221, 605, 981, 1369
BmuI	ACTGGG	1 cut(s)	835
BoxI	GACNNNNGTC	1 cut(s)	246
BplI	GAGNNNNNCTC	2 cut(s)	922, 954
Bpu10I	CCTNAGC	2 cut(s)	1008, 1275
BpuMI	CCSGG	7 cut(s)	279, 293, 307, 400, 478, 593, 602
Bsa29I	ATCGAT	1 cut(s)	975
BsaHI	GRCGYC	1 cut(s)	174
BsaI	GGTCTC	1 cut(s)	254
BsaJI	CCNNGG	8 cut(s)	244, 600, 897, 916, 1138, 1147, 1176, 1269
BsaWI	WCCGGW	2 cut(s)	257, 622
BsaXI	ACNNNNNCTCC	2 cut(s)	330, 360
Bsc4I	CCNNNNNNNGG	3 cut(s)	226, 421, 1315
Bse1I	ACTGG	2 cut(s)	777, 830
Bse21I	CCTNAGG	1 cut(s)	810
BseAI	TCCGGA	1 cut(s)	257
BseBI	CCWGG	4 cut(s)	209, 246, 1149, 1178
BseCI	ATCGAT	1 cut(s)	975
BseDI	CCNNGG	8 cut(s)	244, 600, 897, 916, 1138, 1147, 1176, 1269
BseGI	GGATG	1 cut(s)	596
BseLI	CCNNNNNNNGG	3 cut(s)	226, 421, 1315
BseMII	CTCAG	2 cut(s)	824, 1022
BseNI	ACTGG	2 cut(s)	777, 830
BseSI	GKGCMC	1 cut(s)	757
BseX3I	CGGCCG	1 cut(s)	275
BseXI	GCAGC	6 cut(s)	21, 160, 814, 845, 1308, 1360
BseYI	CCCAGC	2 cut(s)	352, 688
Bsh1236I	CGCG	3 cut(s)	144, 437, 964
Bsh1285I	CGRYCG	1 cut(s)	278
BshFI	GGCC	7 cut(s)	5, 277, 296, 398, 915, 1128, 1225
BshNI	GGYRCC	1 cut(s)	346
BshVI	ATCGAT	1 cut(s)	975
BsiEI	CGRYCG	1 cut(s)	278
BsiHKAI	GWGCWC	1 cut(s)	757
BslFI	GGGAC	2 cut(s)	458, 1291
BslI	CCNNNNNNNGG	3 cut(s)	226, 421, 1315
BsmAI	GTCTC	3 cut(s)	254, 317, 881
BsmBI	CGTCTC	1 cut(s)	317
BsmFI	GGGAC	2 cut(s)	458, 1291
BsmI	GAATGC	1 cut(s)	109
BsnI	GGCC	7 cut(s)	5, 277, 296, 398, 915, 1128, 1225
Bso31I	GGTCTC	1 cut(s)	254
Bsp1286I	GDGCHC	2 cut(s)	757, 1299
Bsp13I	TCCGGA	1 cut(s)	257
Bsp143I	GATC	6 cut(s)	271, 286, 432, 453, 573, 1198
Bsp19I	CCATGG	1 cut(s)	897
Bsp68I	TCGCGA	1 cut(s)	437
BspACI	CCGC	8 cut(s)	107, 142, 350, 962, 1102, 1312, 1325, 1389
BspANI	GGCC	7 cut(s)	5, 277, 296, 398, 915, 1128, 1225
BspCNI	CTCAG	2 cut(s)	823, 1021
BspDI	ATCGAT	1 cut(s)	975
BspEI	TCCGGA	1 cut(s)	257
BspFNI	CGCG	3 cut(s)	144, 437, 964
BspLI	GGNNCC	7 cut(s)	348, 397, 413, 512, 1026, 1296, 1387
BspPI	GGATC	1 cut(s)	1193
BspT107I	GGYRCC	1 cut(s)	346
BspTNI	GGTCTC	1 cut(s)	254
BsrBI	CCGCTC	1 cut(s)	1327
BsrI	ACTGG	2 cut(s)	777, 830
BssECI	CCNNGG	8 cut(s)	244, 600, 897, 916, 1138, 1147, 1176, 1269
BssMI	GATC	6 cut(s)	271, 286, 432, 453, 573, 1198
BssNI	GRCGYC	1 cut(s)	174
BssSI	CACGAG	1 cut(s)	419
BssT1I	CCWWGG	4 cut(s)	897, 916, 1138, 1269
Bst2BI	CACGAG	1 cut(s)	419
Bst2UI	CCWGG	4 cut(s)	209, 246, 1149, 1178
Bst4CI	ACNGT	4 cut(s)	428, 791, 1036, 1303
BstACI	GRCGYC	1 cut(s)	174
BstC8I	GCNNGC	7 cut(s)	7, 146, 589, 686, 757, 1052, 1384
BstDEI	CTNAG	4 cut(s)	810, 1008, 1275, 1368
BstDSI	CCRYGG	1 cut(s)	897
BstEII	GGTNACC	1 cut(s)	791
BstENI	CCTNNNNNAGG	1 cut(s)	1313
BstF5I	GGATG	1 cut(s)	596
BstFNI	CGCG	3 cut(s)	144, 437, 964
BstHHI	GCGC	1 cut(s)	499
BstKTI	GATC	6 cut(s)	274, 289, 435, 456, 576, 1201
BstMAI	GTCTC	3 cut(s)	254, 317, 881
BstMBI	GATC	6 cut(s)	271, 286, 432, 453, 573, 1198
BstMCI	CGRYCG	1 cut(s)	278
BstMWI	GCNNNNNNNGC	4 cut(s)	145, 593, 1149, 1388
BstNI	CCWGG	4 cut(s)	209, 246, 1149, 1178
BstNSI	RCATGY	3 cut(s)	139, 688, 730
BstPAI	GACNNNNGTC	1 cut(s)	246
BstPI	GGTNACC	1 cut(s)	791
BstSLI	GKGCMC	1 cut(s)	757
BstUI	CGCG	3 cut(s)	144, 437, 964
BstV1I	GCAGC	6 cut(s)	21, 160, 814, 845, 1308, 1360
BstX2I	RGATCY	2 cut(s)	573, 1198
BstXI	CCANNNNNNTGG	1 cut(s)	208
BstYI	RGATCY	2 cut(s)	573, 1198
BstZI	CGGCCG	1 cut(s)	275
Bsu15I	ATCGAT	1 cut(s)	975
Bsu36I	CCTNAGG	1 cut(s)	810
BsuRI	GGCC	7 cut(s)	5, 277, 296, 398, 915, 1128, 1225
BsuTUI	ATCGAT	1 cut(s)	975
BtgI	CCRYGG	1 cut(s)	897
BtgZI	GCGATG	1 cut(s)	166
BtrI	CACGTC	2 cut(s)	327, 541
BtsCI	GGATG	1 cut(s)	596
BtsIMutI	CAGTG	2 cut(s)	719, 784
BtuMI	TCGCGA	1 cut(s)	437
Cac8I	GCNNGC	7 cut(s)	7, 146, 589, 686, 757, 1052, 1384
CfoI	GCGC	1 cut(s)	499
Cfr13I	GGNCC	5 cut(s)	396, 424, 959, 1127, 1224
ClaI	ATCGAT	1 cut(s)	975
CseI	GACGC	1 cut(s)	163
CspCI	CAANNNNNGTGG	4 cut(s)	569, 604, 693, 728
CviAII	CATG	8 cut(s)	136, 373, 685, 727, 898, 1121, 1162, 1330
DdeI	CTNAG	4 cut(s)	810, 1008, 1275, 1368
DpnI	GATC	6 cut(s)	273, 288, 434, 455, 575, 1200
DpnII	GATC	6 cut(s)	271, 286, 432, 453, 573, 1198
DraIII	CACNNNGTG	2 cut(s)	421, 541
EaeI	YGGCCR	3 cut(s)	3, 275, 294
EagI	CGGCCG	1 cut(s)	275
EclXI	CGGCCG	1 cut(s)	275
Eco130I	CCWWGG	4 cut(s)	897, 916, 1138, 1269
Eco147I	AGGCCT	1 cut(s)	915
Eco24I	GRGCYC	1 cut(s)	1299
Eco31I	GGTCTC	1 cut(s)	254
Eco47I	GGWCC	2 cut(s)	424, 959
Eco52I	CGGCCG	1 cut(s)	275
Eco57I	CTGAAG	1 cut(s)	1327
Eco81I	CCTNAGG	1 cut(s)	810
Eco91I	GGTNACC	1 cut(s)	791
EcoNI	CCTNNNNNAGG	1 cut(s)	1313
EcoO109I	RGGNCCY	1 cut(s)	1127
EcoO65I	GGTNACC	1 cut(s)	791
EcoRI	GAATTC	1 cut(s)	1154
EcoRII	CCWGG	4 cut(s)	207, 244, 1147, 1176
EcoT14I	CCWWGG	4 cut(s)	897, 916, 1138, 1269
EcoT38I	GRGCYC	1 cut(s)	1299
ErhI	CCWWGG	4 cut(s)	897, 916, 1138, 1269
Esp3I	CGTCTC	1 cut(s)	317
FaeI	CATG	8 cut(s)	139, 376, 688, 730, 901, 1124, 1165, 1333
FalI	AAGNNNNNCTT	2 cut(s)	476, 508
FaqI	GGGAC	2 cut(s)	458, 1291
FatI	CATG	8 cut(s)	135, 372, 684, 726, 897, 1120, 1161, 1329
Fnu4HI	GCNGC	9 cut(s)	10, 149, 350, 803, 859, 1103, 1322, 1325, 1349
FokI	GGATG	1 cut(s)	583
FriOI	GRGCYC	1 cut(s)	1299
Fsp4HI	GCNGC	9 cut(s)	10, 149, 350, 803, 859, 1103, 1322, 1325, 1349
FspBI	CTAG	2 cut(s)	737, 1166
GlaI	GCGC	1 cut(s)	498
GluI	GCNGC	9 cut(s)	10, 149, 350, 803, 859, 1103, 1322, 1325, 1349
GsaI	CCCAGC	2 cut(s)	356, 692
HaeIII	GGCC	7 cut(s)	5, 277, 296, 398, 915, 1128, 1225
HgaI	GACGC	1 cut(s)	163
HhaI	GCGC	1 cut(s)	499
Hin1I	GRCGYC	1 cut(s)	174
Hin1II	CATG	8 cut(s)	139, 376, 688, 730, 901, 1124, 1165, 1333
Hin6I	GCGC	1 cut(s)	497
HinP1I	GCGC	1 cut(s)	497
HincII	GTYRAC	2 cut(s)	568, 838
HindII	GTYRAC	2 cut(s)	568, 838
HinfI	GANTC	6 cut(s)	230, 254, 529, 818, 889, 1364
HphI	GGTGA	6 cut(s)	190, 370, 803, 940, 1150, 1373
Hpy166II	GTNNAC	7 cut(s)	34, 238, 424, 568, 755, 787, 838
Hpy188I	TCNGA	6 cut(s)	16, 271, 432, 894, 942, 1081
Hpy188III	TCNNGA	7 cut(s)	80, 239, 251, 258, 436, 508, 628
Hpy8I	GTNNAC	7 cut(s)	34, 238, 424, 568, 755, 787, 838
Hpy99I	CGWCG	2 cut(s)	179, 542
HpyAV	CCTTC	5 cut(s)	214, 337, 478, 1015, 1106
HpyCH4III	ACNGT	4 cut(s)	428, 791, 1036, 1303
HpyCH4IV	ACGT	3 cut(s)	326, 540, 1074
HpyCH4V	TGCA	7 cut(s)	607, 755, 802, 972, 1186, 1208, 1382
HpyF10VI	GCNNNNNNNGC	4 cut(s)	145, 593, 1149, 1388
HpyF3I	CTNAG	4 cut(s)	810, 1008, 1275, 1368
HpySE526I	ACGT	3 cut(s)	326, 540, 1074
Hsp92I	GRCGYC	1 cut(s)	174
Hsp92II	CATG	8 cut(s)	139, 376, 688, 730, 901, 1124, 1165, 1333
HspAI	GCGC	1 cut(s)	497
Kpn2I	TCCGGA	1 cut(s)	257
Kzo9I	GATC	6 cut(s)	271, 286, 432, 453, 573, 1198
LmnI	GCTCC	8 cut(s)	17, 144, 411, 855, 1024, 1279, 1294, 1391
Lsp1109I	GCAGC	6 cut(s)	21, 160, 814, 845, 1308, 1360
LweI	GCATC	4 cut(s)	221, 605, 981, 1369
MaeI	CTAG	2 cut(s)	737, 1166
MaeII	ACGT	3 cut(s)	326, 540, 1074
MaeIII	GTNAC	4 cut(s)	385, 791, 1333, 1361
MalI	GATC	6 cut(s)	273, 288, 434, 455, 575, 1200
MbiI	CCGCTC	1 cut(s)	1327
MboI	GATC	6 cut(s)	271, 286, 432, 453, 573, 1198
MboII	GAAGA	6 cut(s)	151, 184, 187, 376, 379, 638
MflI	RGATCY	2 cut(s)	573, 1198
MhlI	GDGCHC	2 cut(s)	757, 1299
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	5 cut(s)	57, 466, 633, 997, 1154
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	3 cut(s)	827, 883, 1358
MmeI	TCCRAC	2 cut(s)	300, 540
Mox20I	TGGCCA	1 cut(s)	5
MroI	TCCGGA	1 cut(s)	257
MroXI	GAANNNNTTC	1 cut(s)	234
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	1 cut(s)	1016
MslI	CAYNNNNRTG	1 cut(s)	926
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	1 cut(s)	352
Mva1269I	GAATGC	1 cut(s)	109
MvaI	CCWGG	4 cut(s)	209, 246, 1149, 1178
MvnI	CGCG	3 cut(s)	144, 437, 964
MwoI	GCNNNNNNNGC	4 cut(s)	145, 593, 1149, 1388
NciI	CCSGG	7 cut(s)	279, 293, 307, 400, 478, 593, 602
NcoI	CCATGG	1 cut(s)	897
NdeII	GATC	6 cut(s)	271, 286, 432, 453, 573, 1198
NlaIII	CATG	8 cut(s)	139, 376, 688, 730, 901, 1124, 1165, 1333
NlaIV	GGNNCC	7 cut(s)	348, 397, 413, 512, 1026, 1296, 1387
NmuCI	GTSAC	3 cut(s)	385, 791, 1361
NruI	TCGCGA	1 cut(s)	437
NspI	RCATGY	3 cut(s)	139, 688, 730
PaeI	GCATGC	1 cut(s)	688
PceI	AGGCCT	1 cut(s)	915
PcsI	WCGNNNNNNNCGW	1 cut(s)	543
PctI	GAATGC	1 cut(s)	109
PdmI	GAANNNNTTC	1 cut(s)	234
PfeI	GAWTC	3 cut(s)	230, 254, 529
PflFI	GACNNNGTC	2 cut(s)	542, 1085
PflMI	CCANNNNNTGG	1 cut(s)	421
PkrI	GCNGC	9 cut(s)	11, 150, 351, 804, 860, 1104, 1323, 1326, 1350
PleI	GAGTC	3 cut(s)	826, 883, 1358
PpsI	GAGTC	3 cut(s)	826, 883, 1358
PshAI	GACNNNNGTC	1 cut(s)	246
Psp6I	CCWGG	4 cut(s)	207, 244, 1147, 1176
PspEI	GGTNACC	1 cut(s)	791
PspFI	CCCAGC	2 cut(s)	352, 688
PspGI	CCWGG	4 cut(s)	207, 244, 1147, 1176
PspN4I	GGNNCC	7 cut(s)	348, 397, 413, 512, 1026, 1296, 1387
PspPI	GGNCC	5 cut(s)	396, 424, 959, 1127, 1224
PsuI	RGATCY	2 cut(s)	573, 1198
PsyI	GACNNNGTC	2 cut(s)	542, 1085
RruI	TCGCGA	1 cut(s)	437
RseI	CAYNNNNRTG	1 cut(s)	926
SaqAI	TTAA	1 cut(s)	1016
SatI	GCNGC	9 cut(s)	10, 149, 350, 803, 859, 1103, 1322, 1325, 1349
Sau3AI	GATC	6 cut(s)	271, 286, 432, 453, 573, 1198
Sau96I	GGNCC	5 cut(s)	396, 424, 959, 1127, 1224
SchI	GAGTC	3 cut(s)	827, 883, 1358
SduI	GDGCHC	2 cut(s)	757, 1299
SfaNI	GCATC	4 cut(s)	221, 605, 981, 1369
SinI	GGWCC	2 cut(s)	424, 959
SmiMI	CAYNNNNRTG	1 cut(s)	926
SphI	GCATGC	1 cut(s)	688
Sse9I	AATT	5 cut(s)	57, 466, 633, 997, 1154
SseBI	AGGCCT	1 cut(s)	915
SsiI	CCGC	8 cut(s)	107, 142, 350, 962, 1102, 1312, 1325, 1389
SspMI	CTAG	2 cut(s)	737, 1166
StuI	AGGCCT	1 cut(s)	915
StyI	CCWWGG	4 cut(s)	897, 916, 1138, 1269
TaaI	ACNGT	4 cut(s)	428, 791, 1036, 1303
TaiI	ACGT	3 cut(s)	329, 543, 1077
TasI	AATT	5 cut(s)	57, 466, 633, 997, 1154
TauI	GCSGC	3 cut(s)	352, 1105, 1327
TfiI	GAWTC	3 cut(s)	230, 254, 529
Tru1I	TTAA	1 cut(s)	1016
Tru9I	TTAA	1 cut(s)	1016
TscAI	CASTG	2 cut(s)	726, 784
TseFI	GTSAC	3 cut(s)	385, 791, 1361
TseI	GCWGC	6 cut(s)	9, 148, 802, 858, 1321, 1348
Tsp45I	GTSAC	3 cut(s)	385, 791, 1361
TspGWI	ACGGA	1 cut(s)	223
TspRI	CASTG	2 cut(s)	726, 784
Tth111I	GACNNNGTC	2 cut(s)	542, 1085
Van91I	CCANNNNNTGG	1 cut(s)	421
VneI	GTGCAC	1 cut(s)	753
VpaK11BI	GGWCC	2 cut(s)	424, 959
XagI	CCTNNNNNAGG	1 cut(s)	1313
XapI	RAATTY	1 cut(s)	1154
XceI	RCATGY	3 cut(s)	139, 688, 730
XcmI	CCANNNNNNNNNTGG	1 cut(s)	914
XmnI	GAANNNNTTC	1 cut(s)	234
XspI	CTAG	2 cut(s)	737, 1166

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.