Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0002167

Physical Location & Seq

Genomic Coordinates Reverse (-)

18859905 .. 18864026

Gene Structure 4122 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000007599

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1335 bp

ATGAACTCCGATCAGTTAGTTCATAGAACCCACCACAGCCACAATGAAGACCTACAAGACACCCCCATCCTCGAATCAACCCCGCAAAACAAGCCTCGAAACCTCTCCACGAACCCAATCCGCTACATGCTTCGCGAGCAACGCATCCTCTTCGTCCTCATCGGCATTGCCATCGCCACCCTCTTCTTCACCGCCTTCCCCTTATCAAACCCAGAGCCAGCATGCTCGCTATCTTCCCCGCTCCTCCATGACCCGACCCCAGACTCGAGTTTCTCGTCCGGACCGACCCGGCGGGTTCTGTTGGAGGGTCTCGAGTCGATCAATGTGGGCGGGAAAGTGCCGCTGGGGTTGAAATCGAAGAGCCAGAGGATTGTGGTGACTGGCGGCGCCGGGTTCGTTGGGAGCCACCTTGTGGACCGTCTGATTGCGAGAGGGGACAGTGTGATCGTCATTGATAATTTCTTTACGGGTCGGAAAGAGAACCTGGCGCACCATTTCGGAAACCCCAAGTTTGAGCTCATCAGACACGACGTCGTTGAGCCGATTCTGTTGGAGGTTGACCAGATCTACCACTTGGCCTGCCCTGCCTCTCCTGTGCATTACAAGTTTAATCCGACGAATGTCGTGGGCACATTGAACATGCTTGGACTAGCCAAAAGGGTGGGTGCACGCTTCTTGCTCACAAGCACCAGTGAGGTCTACGGTGACCCTCTGCAGCATCCCCAGGCTGAGACCTACTGGGGCAATGTCAACCCCATCGGTGTAAGGAGTTGTTATGATGAGGGAAAGCGCACAGCAGAGACATTGAGCATGGACTATCATAGAGGCCTTGGCATTGAGGTGAGAATTGCCAGAATTTTCAATACTTACGGACCACGAATGTGCATTGATGATGGTCGTGTTGTTAGCAATTTTGTAGCTCAGGCATTAAGGAAGGAGCCATTAACAGTTTATGGTGATGGCAAGCAAACCAGAAGTTTCCAATACGTTTCTGACTTGGTGGAGGGACTAATGCGGCTGATGGAAGGGAATCATGTAGGACCTTTCAATCTTGGAAATCCTGGTGAATTCACCATGCTAGAACTTGCTCAGGTTGTACAAGACACCATAGACCCCAATGCAAAGATAGAGTTCAGGCCAAACACAGAAGATGACCCCCATAAGAGGAAGCCAGACATTTCAAAGGCAAAAGAGCTTCTCGGATGGGAGCCTACCGTGTCTCTCAGAAAGGGACTTCCTCTCATGACGGTGCTTCTTCTTCTCCAACTCTTCACAAACCTCGGTCGCCTCCATCGTCTTGCCCTAGTCAGTCAGTCCGAGCTGCTAGTTGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0008150 GO:0009987 GO:0016043 GO:0016829 GO:0016830 GO:0016831 GO:0022607 GO:0036094 GO:0042802 GO:0042803 GO:0043167 GO:0043168 GO:0043933 GO:0044085 GO:0044424 GO:0044464 GO:0046983 GO:0048037 GO:0048040 GO:0050662 GO:0051259 GO:0051262 GO:0051287 GO:0065003 GO:0070403 GO:0071840 GO:0097159 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00520 ko01100 map00520 map01100

Pfam Domains

Protein Families

GDP_Man_Dehyd

Protein Analysis

445

Amino Acids

49.46

Weight (kDa)

6.77

Isoelectric Point (pI)

35.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RmlD_sub_bind	PF04321	123 - 381	1.2e-06	RmlD substrate binding domain
Epimerase	PF01370	124 - 352	1e-42	NAD dependent epimerase/dehydratase family
3Beta_HSD	PF01073	125 - 271	3.1e-10	3-beta hydroxysteroid dehydrogenase/isomerase family
GDP_Man_Dehyd	PF16363	126 - 413	1.3e-50	GDP-mannose 4,6 dehydratase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0002167)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47650 AT2G47650 AT3G62830 AT3G62830
fragaria_vesca	FvH4_2g25720 FvH4_2g25720 FvH4_2g25720 FvH4_4g18410
malus_domestica	MD00G1128000.v1.1 MD03G1288200.v1.1 MD11G1309900.v1.1 MD16G1167000.v1.1
prunus_persica	Prupe.1G134000_v2.0.a1 Prupe.8G261400_v2.0.a1 Prupe.8G261400_v2.0.a1
pyrus_communis	pycom16g14100
rosa_chinensis	RchiOBHm_Chr4g0422861 RchiOBHm_Chr6g0294001 RchiOBHm_Chr6g0294011
rosa_laevigata	RLG00000007599 RLG00000011908
rosa_multiflora	Rmu_co8291503.1_g000001 Rmu_sc0000830.1_g000041 Rmu_sc0002321.1_g000009 Rmu_sc0003941.1_g000011 Rmu_sc0004849.1_g000008 Rmu_sc0005126.1_g000004 Rmu_sc0007876.1_g000002
rosa_roxburghii	Rroxscaffold_5G00364720 Rroxscaffold_7G00173730
rosa_rugosa	Rorug04G0181900 Rorug06G0240000
rosa_samantha	Rh4AG242300 Rh4BG245900 Rh4CG256200 Rh4DG240900 Rh6AG353100 Rh6BG360000 Rh6CG367300 Rh6DG353700 Rh6DG353800
rosa_wichuraiana	Rw4G020870 Rw6G030760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	534
AccB1I	GGYRCC	1 cut(s)	386
AccB7I	CCANNNNNTGG	1 cut(s)	412
AccBSI	CCGCTC	1 cut(s)	241
AccI	GTMKAC	1 cut(s)	699
AccII	CGCG	1 cut(s)	135
AccIII	TCCGGA	1 cut(s)	278
AciI	CCGC	9 cut(s)	83, 121, 192, 239, 292, 330, 341, 384, 1015
AcsI	RAATTY	2 cut(s)	855, 1067
AcyI	GRCGYC	2 cut(s)	387, 531
AdeI	CACNNNGTG	1 cut(s)	412
AfaI	GTAC	1 cut(s)	1098
AfiI	CCNNNNNNNGG	2 cut(s)	412, 1164
AgsI	TTSAA	5 cut(s)	352, 637, 862, 1048, 1182
AhdI	GACNNNNNGTC	1 cut(s)	530
AjnI	CCWGG	3 cut(s)	483, 723, 1060
AleI	CACNNNNGTG	1 cut(s)	880
AluBI	AGCT	4 cut(s)	517, 920, 1195, 1321
AluI	AGCT	4 cut(s)	517, 920, 1195, 1321
Alw21I	GWGCWC	2 cut(s)	519, 670
Alw26I	GTCTC	4 cut(s)	314, 725, 794, 1224
Alw44I	GTGCAC	1 cut(s)	666
Ama87I	CYCGRG	2 cut(s)	265, 311
Aor13HI	TCCGGA	1 cut(s)	278
AoxI	GGCC	3 cut(s)	576, 826, 1136
ApaLI	GTGCAC	1 cut(s)	666
ApeKI	GCWGC	2 cut(s)	715, 1321
ApoI	RAATTY	2 cut(s)	855, 1067
AspLEI	GCGC	3 cut(s)	389, 490, 792
AspS9I	GGNCC	4 cut(s)	281, 415, 872, 1040
AsuC2I	CCSGG	2 cut(s)	289, 391
AsuHPI	GGTGA	7 cut(s)	181, 388, 716, 853, 968, 1063, 1076
AvaI	CYCGRG	2 cut(s)	265, 311
AvaII	GGWCC	4 cut(s)	281, 415, 872, 1040
BaeGI	GKGCMC	2 cut(s)	632, 670
BanI	GGYRCC	1 cut(s)	386
BanII	GRGCYC	1 cut(s)	519
BbsI	GAAGAC	1 cut(s)	54
Bbv12I	GWGCWC	2 cut(s)	519, 670
BbvI	GCAGC	2 cut(s)	727, 1308
BccI	CCATC	8 cut(s)	74, 179, 764, 887, 953, 1015, 1197, 1299
BcgI	CGANNNNNNTGC	4 cut(s)	133, 154, 167, 188
BciT130I	CCWGG	3 cut(s)	485, 725, 1062
BcnI	CCSGG	2 cut(s)	289, 391
BcoDI	GTCTC	4 cut(s)	314, 725, 794, 1224
BfaI	CTAG	4 cut(s)	650, 1079, 1304, 1325
BfmI	CTRYAG	1 cut(s)	713
BfoI	RGCGCY	1 cut(s)	390
BglII	AGATCT	1 cut(s)	564
BisI	GCNGC	5 cut(s)	341, 385, 716, 1016, 1322
BlsI	GCNGC	5 cut(s)	342, 386, 717, 1017, 1323
Bme1390I	CCNGG	5 cut(s)	289, 391, 485, 725, 1062
Bme18I	GGWCC	4 cut(s)	281, 415, 872, 1040
BmeRI	GACNNNNNGTC	1 cut(s)	530
BmeT110I	CYCGRG	2 cut(s)	265, 311
BmgT120I	GGNCC	4 cut(s)	281, 415, 872, 1040
BmiI	GGNNCC	4 cut(s)	388, 404, 939, 1209
BmrFI	CCNGG	5 cut(s)	289, 391, 485, 725, 1062
BmrI	ACTGGG	1 cut(s)	748
BmsI	GCATC	2 cut(s)	153, 727
BmuI	ACTGGG	1 cut(s)	748
BoxI	GACNNNNGTC	1 cut(s)	620
BpiI	GAAGAC	1 cut(s)	54
Bpu10I	CCTNAGC	2 cut(s)	921, 1089
BpuMI	CCSGG	2 cut(s)	289, 391
BsaHI	GRCGYC	2 cut(s)	387, 531
BsaI	GGTCTC	2 cut(s)	314, 725
BsaJI	CCNNGG	3 cut(s)	723, 829, 1279
BsaWI	WCCGGW	1 cut(s)	278
Bsc4I	CCNNNNNNNGG	2 cut(s)	412, 1164
Bse1I	ACTGG	3 cut(s)	385, 690, 743
Bse3DI	GCAATG	2 cut(s)	165, 751
BseAI	TCCGGA	1 cut(s)	278
BseBI	CCWGG	3 cut(s)	485, 725, 1062
BseDI	CCNNGG	3 cut(s)	723, 829, 1279
BseGI	GGATG	4 cut(s)	66, 144, 718, 1208
BseLI	CCNNNNNNNGG	2 cut(s)	412, 1164
BseMI	GCAATG	2 cut(s)	165, 751
BseMII	CTCAG	4 cut(s)	720, 935, 1103, 1237
BseNI	ACTGG	3 cut(s)	385, 690, 743
BseRI	GAGGAG	1 cut(s)	233
BseSI	GKGCMC	2 cut(s)	632, 670
BseXI	GCAGC	2 cut(s)	727, 1308
BseYI	CCCAGC	1 cut(s)	343
Bsh1236I	CGCG	1 cut(s)	135
Bsh1285I	CGRYCG	1 cut(s)	1285
BshFI	GGCC	3 cut(s)	578, 828, 1138
BshNI	GGYRCC	1 cut(s)	386
BsiEI	CGRYCG	1 cut(s)	1285
BsiHKAI	GWGCWC	2 cut(s)	519, 670
BsiHKCI	CYCGRG	2 cut(s)	265, 311
BsiSI	CCGG	3 cut(s)	279, 289, 390
BslFI	GGGAC	3 cut(s)	449, 1020, 1245
BslI	CCNNNNNNNGG	2 cut(s)	412, 1164
BsmAI	GTCTC	4 cut(s)	314, 725, 794, 1224
BsmFI	GGGAC	3 cut(s)	449, 1020, 1245
BsnI	GGCC	3 cut(s)	578, 828, 1138
Bso31I	GGTCTC	2 cut(s)	314, 725
BsoBI	CYCGRG	2 cut(s)	265, 311
Bsp1286I	GDGCHC	3 cut(s)	519, 632, 670
Bsp13I	TCCGGA	1 cut(s)	278
Bsp1407I	TGTACA	1 cut(s)	1096
Bsp143I	GATC	4 cut(s)	10, 318, 444, 564
Bsp68I	TCGCGA	1 cut(s)	135
BspACI	CCGC	9 cut(s)	83, 121, 192, 239, 292, 330, 341, 384, 1015
BspANI	GGCC	3 cut(s)	578, 828, 1138
BspCNI	CTCAG	4 cut(s)	721, 934, 1102, 1236
BspEI	TCCGGA	1 cut(s)	278
BspFNI	CGCG	1 cut(s)	135
BspHI	TCATGA	1 cut(s)	1242
BspLI	GGNNCC	4 cut(s)	388, 404, 939, 1209
BspMAI	CTGCAG	1 cut(s)	717
BspQI	GCTCTTC	1 cut(s)	353
BspT107I	GGYRCC	1 cut(s)	386
BspTNI	GGTCTC	2 cut(s)	314, 725
BsrBI	CCGCTC	1 cut(s)	241
BsrDI	GCAATG	2 cut(s)	165, 751
BsrGI	TGTACA	1 cut(s)	1096
BsrI	ACTGG	3 cut(s)	385, 690, 743
BssECI	CCNNGG	3 cut(s)	723, 829, 1279
BssMI	GATC	4 cut(s)	10, 318, 444, 564
BssNI	GRCGYC	2 cut(s)	387, 531
BssT1I	CCWWGG	1 cut(s)	829
Bst2UI	CCWGG	3 cut(s)	485, 725, 1062
Bst4CI	ACNGT	6 cut(s)	419, 440, 704, 949, 1216, 1249
Bst6I	CTCTTC	4 cut(s)	155, 188, 353, 1274
BstACI	GRCGYC	2 cut(s)	387, 531
BstAUI	TGTACA	1 cut(s)	1096
BstC8I	GCNNGC	7 cut(s)	137, 219, 223, 227, 580, 670, 965
BstDEI	CTNAG	4 cut(s)	729, 921, 1089, 1223
BstEII	GGTNACC	1 cut(s)	704
BstF5I	GGATG	4 cut(s)	66, 144, 718, 1208
BstFNI	CGCG	1 cut(s)	135
BstH2I	RGCGCY	1 cut(s)	390
BstHHI	GCGC	3 cut(s)	389, 490, 792
BstKTI	GATC	4 cut(s)	13, 321, 447, 567
BstMAI	GTCTC	4 cut(s)	314, 725, 794, 1224
BstMBI	GATC	4 cut(s)	10, 318, 444, 564
BstMCI	CGRYCG	1 cut(s)	1285
BstMWI	GCNNNNNNNGC	4 cut(s)	91, 136, 141, 584
BstNI	CCWGG	3 cut(s)	485, 725, 1062
BstNSI	RCATGY	3 cut(s)	130, 225, 643
BstPAI	GACNNNNGTC	1 cut(s)	620
BstPI	GGTNACC	1 cut(s)	704
BstSCI	CCNGG	5 cut(s)	287, 389, 483, 723, 1060
BstSFI	CTRYAG	1 cut(s)	713
BstSLI	GKGCMC	2 cut(s)	632, 670
BstUI	CGCG	1 cut(s)	135
BstV1I	GCAGC	2 cut(s)	727, 1308
BstV2I	GAAGAC	1 cut(s)	54
BstX2I	RGATCY	1 cut(s)	564
BstXI	CCANNNNNNTGG	1 cut(s)	661
BstYI	RGATCY	1 cut(s)	564
BsuRI	GGCC	3 cut(s)	578, 828, 1138
BtgZI	GCGATG	1 cut(s)	157
BtsCI	GGATG	4 cut(s)	66, 144, 718, 1208
BtsIMutI	CAGTG	2 cut(s)	445, 697
BtuMI	TCGCGA	1 cut(s)	135
Cac8I	GCNNGC	7 cut(s)	137, 219, 223, 227, 580, 670, 965
CciI	TCATGA	1 cut(s)	1242
CfoI	GCGC	3 cut(s)	389, 490, 792
Cfr13I	GGNCC	4 cut(s)	281, 415, 872, 1040
CpoI	CGGWCCG	1 cut(s)	281
Csp6I	GTAC	1 cut(s)	1097
CspI	CGGWCCG	1 cut(s)	281
CviAII	CATG	8 cut(s)	127, 222, 248, 640, 811, 1034, 1075, 1243
CviQI	GTAC	1 cut(s)	1097
DdeI	CTNAG	4 cut(s)	729, 921, 1089, 1223
DinI	GGCGCC	1 cut(s)	388
DpnI	GATC	4 cut(s)	12, 320, 446, 566
DpnII	GATC	4 cut(s)	10, 318, 444, 564
DraIII	CACNNNGTG	1 cut(s)	412
DriI	GACNNNNNGTC	1 cut(s)	530
Eam1104I	CTCTTC	4 cut(s)	155, 188, 353, 1274
Eam1105I	GACNNNNNGTC	1 cut(s)	530
EarI	CTCTTC	4 cut(s)	155, 188, 353, 1274
Ecl136II	GAGCTC	1 cut(s)	517
Eco130I	CCWWGG	1 cut(s)	829
Eco147I	AGGCCT	1 cut(s)	828
Eco24I	GRGCYC	1 cut(s)	519
Eco31I	GGTCTC	2 cut(s)	314, 725
Eco47I	GGWCC	4 cut(s)	281, 415, 872, 1040
Eco53kI	GAGCTC	1 cut(s)	517
Eco88I	CYCGRG	2 cut(s)	265, 311
Eco91I	GGTNACC	1 cut(s)	704
EcoICRI	GAGCTC	1 cut(s)	517
EcoO109I	RGGNCCY	1 cut(s)	1040
EcoO65I	GGTNACC	1 cut(s)	704
EcoRI	GAATTC	1 cut(s)	1067
EcoRII	CCWGG	3 cut(s)	483, 723, 1060
EcoT14I	CCWWGG	1 cut(s)	829
EcoT38I	GRGCYC	1 cut(s)	519
EgeI	GGCGCC	1 cut(s)	388
EheI	GGCGCC	1 cut(s)	388
ErhI	CCWWGG	1 cut(s)	829
FaeI	CATG	8 cut(s)	130, 225, 251, 643, 814, 1037, 1078, 1246
FaqI	GGGAC	3 cut(s)	449, 1020, 1245
FatI	CATG	8 cut(s)	126, 221, 247, 639, 810, 1033, 1074, 1242
FauI	CCCGC	4 cut(s)	90, 246, 285, 323
FblI	GTMKAC	1 cut(s)	699
Fnu4HI	GCNGC	5 cut(s)	341, 385, 716, 1016, 1322
FokI	GGATG	4 cut(s)	53, 131, 705, 1215
FriOI	GRGCYC	1 cut(s)	519
Fsp4HI	GCNGC	5 cut(s)	341, 385, 716, 1016, 1322
FspBI	CTAG	4 cut(s)	650, 1079, 1304, 1325
GlaI	GCGC	3 cut(s)	388, 489, 791
GluI	GCNGC	5 cut(s)	341, 385, 716, 1016, 1322
GsaI	CCCAGC	1 cut(s)	347
HaeII	RGCGCY	1 cut(s)	390
HaeIII	GGCC	3 cut(s)	578, 828, 1138
HapII	CCGG	3 cut(s)	279, 289, 390
HhaI	GCGC	3 cut(s)	389, 490, 792
Hin1I	GRCGYC	2 cut(s)	387, 531
Hin1II	CATG	8 cut(s)	130, 225, 251, 643, 814, 1037, 1078, 1246
Hin6I	GCGC	3 cut(s)	387, 488, 790
HinP1I	GCGC	3 cut(s)	387, 488, 790
HincII	GTYRAC	2 cut(s)	559, 751
HindII	GTYRAC	2 cut(s)	559, 751
HinfI	GANTC	5 cut(s)	74, 263, 314, 544, 1030
HpaII	CCGG	3 cut(s)	279, 289, 390
HphI	GGTGA	7 cut(s)	181, 388, 716, 853, 968, 1063, 1076
Hpy166II	GTNNAC	5 cut(s)	415, 559, 668, 700, 751
Hpy188III	TCNNGA	4 cut(s)	134, 279, 311, 1243
Hpy8I	GTNNAC	5 cut(s)	415, 559, 668, 700, 751
Hpy99I	CGWCG	3 cut(s)	533, 536, 619
HpyAV	CCTTC	3 cut(s)	205, 928, 1019
HpyCH4III	ACNGT	6 cut(s)	419, 440, 704, 949, 1216, 1249
HpyCH4IV	ACGT	2 cut(s)	531, 987
HpyCH4V	TGCA	5 cut(s)	598, 668, 715, 885, 1121
HpyF10VI	GCNNNNNNNGC	4 cut(s)	91, 136, 141, 584
HpyF3I	CTNAG	4 cut(s)	729, 921, 1089, 1223
HpySE526I	ACGT	2 cut(s)	531, 987
Hsp92I	GRCGYC	2 cut(s)	387, 531
Hsp92II	CATG	8 cut(s)	130, 225, 251, 643, 814, 1037, 1078, 1246
HspAI	GCGC	3 cut(s)	387, 488, 790
KasI	GGCGCC	1 cut(s)	386
Kpn2I	TCCGGA	1 cut(s)	278
Kzo9I	GATC	4 cut(s)	10, 318, 444, 564
LguI	GCTCTTC	1 cut(s)	353
LmnI	GCTCC	4 cut(s)	246, 402, 937, 1207
Lsp1109I	GCAGC	2 cut(s)	727, 1308
LweI	GCATC	2 cut(s)	153, 727
MaeI	CTAG	4 cut(s)	650, 1079, 1304, 1325
MaeII	ACGT	2 cut(s)	531, 987
MaeIII	GTNAC	2 cut(s)	376, 704
MalI	GATC	4 cut(s)	12, 320, 446, 566
MbiI	CCGCTC	1 cut(s)	241
MboI	GATC	4 cut(s)	10, 318, 444, 564
MflI	RGATCY	1 cut(s)	564
MhlI	GDGCHC	3 cut(s)	519, 632, 670
MluCI	AATT	5 cut(s)	457, 846, 855, 910, 1067
Mly113I	GGCGCC	1 cut(s)	387
MlyI	GAGTC	2 cut(s)	257, 323
MmeI	TCCRAC	5 cut(s)	282, 452, 531, 638, 1288
MroI	TCCGGA	1 cut(s)	278
MseI	TTAA	4 cut(s)	609, 929, 944, 1333
MslI	CAYNNNNRTG	3 cut(s)	839, 880, 1247
MspA1I	CMGCKG	1 cut(s)	343
MspI	CCGG	3 cut(s)	279, 289, 390
MspR9I	CCNGG	5 cut(s)	289, 391, 485, 725, 1062
MvaI	CCWGG	3 cut(s)	485, 725, 1062
MvnI	CGCG	1 cut(s)	135
MwoI	GCNNNNNNNGC	4 cut(s)	91, 136, 141, 584
NarI	GGCGCC	1 cut(s)	387
NciI	CCSGG	2 cut(s)	289, 391
NdeII	GATC	4 cut(s)	10, 318, 444, 564
NlaIII	CATG	8 cut(s)	130, 225, 251, 643, 814, 1037, 1078, 1246
NlaIV	GGNNCC	4 cut(s)	388, 404, 939, 1209
NmuCI	GTSAC	2 cut(s)	376, 704
NruI	TCGCGA	1 cut(s)	135
NspI	RCATGY	3 cut(s)	130, 225, 643
OliI	CACNNNNGTG	1 cut(s)	880
PaeI	GCATGC	1 cut(s)	225
PaeR7I	CTCGAG	2 cut(s)	265, 311
PagI	TCATGA	1 cut(s)	1242
PceI	AGGCCT	1 cut(s)	828
PciSI	GCTCTTC	1 cut(s)	353
PcsI	WCGNNNNNNNCGW	3 cut(s)	272, 281, 1291
PfeI	GAWTC	3 cut(s)	74, 544, 1030
PflMI	CCANNNNNTGG	1 cut(s)	412
PkrI	GCNGC	5 cut(s)	342, 386, 717, 1017, 1323
PleI	GAGTC	2 cut(s)	257, 322
PluTI	GGCGCC	1 cut(s)	390
PpsI	GAGTC	2 cut(s)	257, 322
PpuMI	RGGWCCY	1 cut(s)	1040
PshAI	GACNNNNGTC	1 cut(s)	620
Psp124BI	GAGCTC	1 cut(s)	519
Psp5II	RGGWCCY	1 cut(s)	1040
Psp6I	CCWGG	3 cut(s)	483, 723, 1060
PspEI	GGTNACC	1 cut(s)	704
PspFI	CCCAGC	1 cut(s)	343
PspGI	CCWGG	3 cut(s)	483, 723, 1060
PspN4I	GGNNCC	4 cut(s)	388, 404, 939, 1209
PspPI	GGNCC	4 cut(s)	281, 415, 872, 1040
PspPPI	RGGWCCY	1 cut(s)	1040
PspXI	VCTCGAGB	1 cut(s)	265
PstI	CTGCAG	1 cut(s)	717
PsuI	RGATCY	1 cut(s)	564
RruI	TCGCGA	1 cut(s)	135
RsaI	GTAC	1 cut(s)	1098
RsaNI	GTAC	1 cut(s)	1097
RseI	CAYNNNNRTG	3 cut(s)	839, 880, 1247
Rsr2I	CGGWCCG	1 cut(s)	281
RsrII	CGGWCCG	1 cut(s)	281
SacI	GAGCTC	1 cut(s)	519
SapI	GCTCTTC	1 cut(s)	353
SaqAI	TTAA	4 cut(s)	609, 929, 944, 1333
SatI	GCNGC	5 cut(s)	341, 385, 716, 1016, 1322
Sau3AI	GATC	4 cut(s)	10, 318, 444, 564
Sau96I	GGNCC	4 cut(s)	281, 415, 872, 1040
SchI	GAGTC	2 cut(s)	257, 323
ScrFI	CCNGG	5 cut(s)	289, 391, 485, 725, 1062
SduI	GDGCHC	3 cut(s)	519, 632, 670
SfaNI	GCATC	2 cut(s)	153, 727
SfcI	CTRYAG	1 cut(s)	713
SfoI	GGCGCC	1 cut(s)	388
Sfr274I	CTCGAG	2 cut(s)	265, 311
SinI	GGWCC	4 cut(s)	281, 415, 872, 1040
SlaI	CTCGAG	2 cut(s)	265, 311
SmiMI	CAYNNNNRTG	3 cut(s)	839, 880, 1247
SmlI	CTYRAG	2 cut(s)	265, 311
SmoI	CTYRAG	2 cut(s)	265, 311
SphI	GCATGC	1 cut(s)	225
Sse9I	AATT	5 cut(s)	457, 846, 855, 910, 1067
SseBI	AGGCCT	1 cut(s)	828
SsiI	CCGC	9 cut(s)	83, 121, 192, 239, 292, 330, 341, 384, 1015
SspDI	GGCGCC	1 cut(s)	386
SspMI	CTAG	4 cut(s)	650, 1079, 1304, 1325
SstI	GAGCTC	1 cut(s)	519
StuI	AGGCCT	1 cut(s)	828
StyD4I	CCNGG	5 cut(s)	287, 389, 483, 723, 1060
StyI	CCWWGG	1 cut(s)	829
TaaI	ACNGT	6 cut(s)	419, 440, 704, 949, 1216, 1249
TaiI	ACGT	2 cut(s)	534, 990
TaqI	TCGA	6 cut(s)	72, 97, 266, 312, 317, 356
TaqII	GACCGA	2 cut(s)	298, 1271
TasI	AATT	5 cut(s)	457, 846, 855, 910, 1067
TatI	WGTACW	1 cut(s)	1096
TauI	GCSGC	3 cut(s)	343, 387, 1018
TfiI	GAWTC	3 cut(s)	74, 544, 1030
Tru1I	TTAA	4 cut(s)	609, 929, 944, 1333
Tru9I	TTAA	4 cut(s)	609, 929, 944, 1333
TscAI	CASTG	2 cut(s)	445, 697
TseFI	GTSAC	2 cut(s)	376, 704
TseI	GCWGC	2 cut(s)	715, 1321
Tsp45I	GTSAC	2 cut(s)	376, 704
TspDTI	ATGAA	3 cut(s)	11, 17, 60
TspGWI	ACGGA	1 cut(s)	885
TspRI	CASTG	2 cut(s)	445, 697
Van91I	CCANNNNNTGG	1 cut(s)	412
VneI	GTGCAC	1 cut(s)	666
VpaK11BI	GGWCC	4 cut(s)	281, 415, 872, 1040
XapI	RAATTY	2 cut(s)	855, 1067
XceI	RCATGY	3 cut(s)	130, 225, 643
XhoI	CTCGAG	2 cut(s)	265, 311
XmiI	GTMKAC	1 cut(s)	699
XspI	CTAG	4 cut(s)	650, 1079, 1304, 1325
ZraI	GACGTC	1 cut(s)	532

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.