Rroxscaffold_7G00173730

UDP-glucuronic acid decarboxylase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0002167
Physical Location & Seq
Reverse (-)
13631693 .. 13634899
3207 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00173730.1

Sequence Viewer

Length: 1602 bp
ATGGGCTCGGAGCTGATATTCCGGGGCGGGCACGACGAGGCCCAGCCCGCTTCCGACACCTACTCGCCGAAACGCCCGAAGCCGTGGGCCTCGGTGACCCGCCCGATTGGGTACCTGCTCCGGGAACAGCGCCTGATTTTCATCCTCGTCGGCATTGCCATCGCCACCGCCTGCTTCACCCTCCTGCCGTCGTCTCGATCCCCCTCCTACCACGGCCACAACCCGATCCCCAGCGACTTCGTCAAGTTCGACTTCGAGTCCACCCACCTCTCCCACAAACCCACCTACGAGCGCCGGTTCGGGTTGACCAATTACAATTCTGGCGGGAAGGTCCCGCTGAGCCTGAAGCGCAAGGGCCTCCGGATCGTCGTCACCGGCGGCGCCGGGTTCGTCGGGTCCCACCTCGTCGACCGCCTCATGGAGCGCGGCGACAGCGTGATCGTCGTCGACAATTTCTTCACCGGAAGGAAGGAGAACGTTCAGCACCATTTTGGGAACCCTAGATTCGAATTAATCCGACACGACGTCGTCGAGCCTCTCCTCCTTGAAGTCGACCAGATCTACCATCTCGCCTGCCCCGCCTCGCCGGTCCATTACAAGTTCAATCCCCACAAGACCAATGTGGTGGGAACTCTCAACATGCTGGGGCTGGCGAAGCGGGTCGGAGCTCGGTTCTTGTTGACCAGCACCAGCGAGGTCTACGGCGATCCTCTGCAGCACCCTCAGGTCGAGACCTACTGGGGAAACGTCAATCCCATCGTCCCCGGTGAGATAATACATAAATTGGGAAACCTTAGTTTGGGGAGGGGCTTGTCCTTTTCCTCGATGGCACGATGCCACCACCACGTTGGACCCCAGGGTGTGGTACCCGCCCTCCGAGATCCGGTTGAGGCGTTTCATTCCGTTTCGTGCACGGTCTACGAGATTACCCGTGATTTTCGGGTCCACTCATCCGACGGTGGAGATGGCTCTCGTCGCCATCAGCCGGGAGGTCGGAGGGTAATACCAGAAACTGGGGGAGGGCATGGTGGTAGTTTCAAAAGCGTAGGTGTCCGAAGTTGCTACGATGAGGGAAAGCGTACGGCTGAGACATTGACTATGGACTACCATAGAGGGGCAGGTGTCGAGGTTAGGATTGCTAGGATTTTCAACACATACGGCCCGAGAATGTGCATAGACGACGGTCGTGTTGTGAGTAACTTTGTTGCTCAGGCATTGAGGAAGGTGCCTATGACTGTTTACGGTGATGGAAAGCAGACAAGAAGTTTCCAATACGTTTCTGATCTGGTGGATGGTCTGATGCGGCTGATGGAAGGCGAGCATGTTGGACCTTTCAATCTCGGGAACCCTGGTGAATTCACCATGCTTGAACTTGCAAAGGTGGTCCAAGAAACAATTGACAAAGATGCAAAGATTGAGTTCAGGCCGAACACTGAGGATGACCCGCACAAGAGGAAGCCTGATATCACAAAGGCCAAAGACCTTCTTGGTTGGCAACCAAAGGTGTCTCTCCGCAAGGGACTCCCACTCATGGTCTCGGACTTCAGCAAACGTATCTTCGGTGACCACAAGGAAGCTGCTGGTGCCACCACCACCATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00520 ko01100 map00520 map01100
Pfam Domains
Protein Families
GDP_Man_Dehyd

Protein Analysis

533

Amino Acids

59.12

Weight (kDa)

9.24

Isoelectric Point (pI)

37.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Epimerase PF01370 122 - 246 3.3e-21 NAD dependent epimerase/dehydratase family
3Beta_HSD PF01073 123 - 236 1.1e-08 3-beta hydroxysteroid dehydrogenase/isomerase family
GDP_Man_Dehyd PF16363 124 - 245 2.1e-23 GDP-mannose 4,6 dehydratase
Epimerase PF01370 350 - 448 6e-17 NAD dependent epimerase/dehydratase family
GDP_Man_Dehyd PF16363 352 - 509 4.5e-22 GDP-mannose 4,6 dehydratase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1109
AatII GACGTC 1 cut(s) 528
Acc36I ACCTGC 2 cut(s) 123, 1109
Acc65I GGTACC 2 cut(s) 111, 865
AccB1I GGYRCC 5 cut(s) 111, 380, 865, 1225, 1583
AccB7I CCANNNNNTGG 2 cut(s) 862, 1013
AccI GTMKAC 5 cut(s) 408, 447, 552, 699, 918
AccII CGCG 1 cut(s) 426
AccIII TCCGGA 1 cut(s) 360
AclI AACGTT 1 cut(s) 477
AclWI GGATC 5 cut(s) 192, 220, 371, 701, 875
AcoI YGGCCR 1 cut(s) 214
AcsI RAATTY 1 cut(s) 1355
AcuI CTGAAG 2 cut(s) 365, 1528
AcyI GRCGYC 2 cut(s) 381, 525
AfaI GTAC 3 cut(s) 113, 867, 1081
AfiI CCNNNNNNNGG 9 cut(s) 121, 418, 799, 862, 883, 985, 1013, 1114, 1531
AgsI TTSAA 6 cut(s) 548, 604, 1039, 1150, 1336, 1370
AhdI GACNNNNNGTC 2 cut(s) 256, 524
AjnI CCWGG 2 cut(s) 855, 1348
AluBI AGCT 3 cut(s) 13, 668, 1577
AluI AGCT 3 cut(s) 13, 668, 1577
Alw21I GWGCWC 2 cut(s) 670, 914
Alw26I GTCTC 5 cut(s) 198, 725, 1082, 1512, 1540
Alw44I GTGCAC 1 cut(s) 910
AlwI GGATC 5 cut(s) 192, 220, 371, 701, 875
AlwNI CAGNNNCTG 2 cut(s) 133, 1013
Ama87I CYCGRG 2 cut(s) 1162, 1340
Aor13HI TCCGGA 1 cut(s) 360
AoxI GGCC 7 cut(s) 39, 87, 214, 355, 1159, 1424, 1473
ApaLI GTGCAC 1 cut(s) 910
ApeKI GCWGC 2 cut(s) 715, 1577
ApoI RAATTY 1 cut(s) 1355
AseI ATTAAT 1 cut(s) 512
Asp718I GGTACC 2 cut(s) 111, 865
AspLEI GCGC 5 cut(s) 132, 294, 351, 383, 426
AsuC2I CCSGG 5 cut(s) 23, 122, 385, 765, 987
AsuHPI GGTGA 9 cut(s) 106, 169, 364, 451, 779, 1256, 1351, 1364, 1574
AsuII TTCGAA 1 cut(s) 507
AvaI CYCGRG 2 cut(s) 1162, 1340
AvaII GGWCC 7 cut(s) 331, 396, 589, 851, 943, 1328, 1384
AxyI CCTNAGG 1 cut(s) 723
BaeGI GKGCMC 2 cut(s) 33, 914
BanI GGYRCC 5 cut(s) 111, 380, 865, 1225, 1583
BanII GRGCYC 2 cut(s) 8, 670
Bbv12I GWGCWC 2 cut(s) 670, 914
BbvI GCAGC 2 cut(s) 727, 1564
BccI CCATC 9 cut(s) 167, 573, 764, 820, 959, 987, 1241, 1286, 1303
BceAI ACGGC 6 cut(s) 67, 172, 229, 718, 1098, 1174
BcgI CGANNNNNNTGC 2 cut(s) 142, 176
BciT130I CCWGG 2 cut(s) 857, 1350
BcnI CCSGG 5 cut(s) 23, 122, 385, 765, 987
BcoDI GTCTC 5 cut(s) 198, 725, 1082, 1512, 1540
BfaI CTAG 2 cut(s) 501, 1140
BfmI CTRYAG 1 cut(s) 713
BfoI RGCGCY 3 cut(s) 133, 295, 384
BfuAI ACCTGC 2 cut(s) 123, 1109
BglII AGATCT 1 cut(s) 558
BisI GCNGC 5 cut(s) 379, 427, 716, 1304, 1578
BlpI GCTNAGC 1 cut(s) 338
BlsI GCNGC 5 cut(s) 380, 428, 717, 1305, 1579
Bme1390I CCNGG 7 cut(s) 23, 122, 385, 765, 857, 987, 1350
Bme18I GGWCC 7 cut(s) 331, 396, 589, 851, 943, 1328, 1384
BmeRI GACNNNNNGTC 2 cut(s) 256, 524
BmeT110I CYCGRG 2 cut(s) 1162, 1340
BmrFI CCNGG 7 cut(s) 23, 122, 385, 765, 857, 987, 1350
BmrI ACTGGG 2 cut(s) 748, 1023
BmsI GCATC 3 cut(s) 824, 1290, 1396
BmuI ACTGGG 2 cut(s) 748, 1023
BoxI GACNNNNGTC 1 cut(s) 1182
Bpu10I CCTNAGC 1 cut(s) 1209
Bpu1102I GCTNAGC 1 cut(s) 338
Bpu14I TTCGAA 1 cut(s) 507
BpuMI CCSGG 5 cut(s) 23, 122, 385, 765, 987
BsaBI GATNNNNATC 1 cut(s) 140
BsaHI GRCGYC 2 cut(s) 381, 525
BsaI GGTCTC 2 cut(s) 725, 1540
BsaJI CCNNGG 8 cut(s) 22, 83, 90, 211, 763, 855, 856, 1348
BsaWI WCCGGW 3 cut(s) 360, 461, 883
BsaXI ACNNNNNCTCC 2 cut(s) 858, 888
Bsc4I CCNNNNNNNGG 9 cut(s) 121, 418, 799, 862, 883, 985, 1013, 1114, 1531
Bse118I RCCGGY 3 cut(s) 294, 374, 586
Bse1I ACTGG 2 cut(s) 743, 1018
Bse21I CCTNAGG 1 cut(s) 723
Bse3DI GCAATG 1 cut(s) 153
Bse8I GATNNNNATC 1 cut(s) 140
BseAI TCCGGA 1 cut(s) 360
BseBI CCWGG 2 cut(s) 857, 1350
BseDI CCNNGG 8 cut(s) 22, 83, 90, 211, 763, 855, 856, 1348
BseGI GGATG 4 cut(s) 141, 950, 1297, 1444
BseJI GATNNNNATC 1 cut(s) 140
BseLI CCNNNNNNNGG 9 cut(s) 121, 418, 799, 862, 883, 985, 1013, 1114, 1531
BseMI GCAATG 1 cut(s) 153
BseMII CTCAG 5 cut(s) 329, 737, 1077, 1223, 1425
BseNI ACTGG 2 cut(s) 743, 1018
BseRI GAGGAG 1 cut(s) 530
BseSI GKGCMC 2 cut(s) 33, 914
BseXI GCAGC 2 cut(s) 727, 1564
BseYI CCCAGC 3 cut(s) 42, 230, 643
Bsh1236I CGCG 1 cut(s) 426
Bsh1285I CGRYCG 2 cut(s) 412, 1186
BshFI GGCC 7 cut(s) 41, 89, 216, 357, 1161, 1426, 1475
BshNI GGYRCC 5 cut(s) 111, 380, 865, 1225, 1583
BsiEI CGRYCG 2 cut(s) 412, 1186
BsiHKAI GWGCWC 2 cut(s) 670, 914
BsiHKCI CYCGRG 2 cut(s) 1162, 1340
BsiWI CGTACG 1 cut(s) 1079
BslFI GGGAC 4 cut(s) 317, 382, 746, 1533
BslI CCNNNNNNNGG 9 cut(s) 121, 418, 799, 862, 883, 985, 1013, 1114, 1531
BsmAI GTCTC 5 cut(s) 198, 725, 1082, 1512, 1540
BsmBI CGTCTC 1 cut(s) 198
BsmFI GGGAC 4 cut(s) 317, 382, 746, 1533
BsnI GGCC 7 cut(s) 41, 89, 216, 357, 1161, 1426, 1475
Bso31I GGTCTC 2 cut(s) 725, 1540
BsoBI CYCGRG 2 cut(s) 1162, 1340
Bsp119I TTCGAA 1 cut(s) 507
Bsp1286I GDGCHC 4 cut(s) 8, 33, 670, 914
Bsp13I TCCGGA 1 cut(s) 360
Bsp143I GATC 8 cut(s) 197, 225, 363, 438, 558, 706, 880, 1282
Bsp1720I GCTNAGC 1 cut(s) 338
BspANI GGCC 7 cut(s) 41, 89, 216, 357, 1161, 1426, 1475
BspCNI CTCAG 5 cut(s) 330, 736, 1078, 1222, 1426
BspEI TCCGGA 1 cut(s) 360
BspFNI CGCG 1 cut(s) 426
BspMAI CTGCAG 1 cut(s) 717
BspMI ACCTGC 2 cut(s) 123, 1109
BspPI GGATC 5 cut(s) 192, 220, 371, 701, 875
BspT104I TTCGAA 1 cut(s) 507
BspT107I GGYRCC 5 cut(s) 111, 380, 865, 1225, 1583
BspTNI GGTCTC 2 cut(s) 725, 1540
BsrDI GCAATG 1 cut(s) 153
BsrFI RCCGGY 3 cut(s) 294, 374, 586
BsrI ACTGG 2 cut(s) 743, 1018
BssAI RCCGGY 3 cut(s) 294, 374, 586
BssECI CCNNGG 8 cut(s) 22, 83, 90, 211, 763, 855, 856, 1348
BssMI GATC 8 cut(s) 197, 225, 363, 438, 558, 706, 880, 1282
BssNI GRCGYC 2 cut(s) 381, 525
Bst2UI CCWGG 2 cut(s) 857, 1350
Bst4CI ACNGT 5 cut(s) 916, 959, 1184, 1237, 1244
BstACI GRCGYC 2 cut(s) 381, 525
BstBI TTCGAA 1 cut(s) 507
BstC8I GCNNGC 6 cut(s) 29, 48, 172, 574, 651, 1319
BstDEI CTNAG 6 cut(s) 338, 723, 794, 1086, 1209, 1434
BstDSI CCRYGG 2 cut(s) 83, 211
BstEII GGTNACC 2 cut(s) 94, 1562
BstF5I GGATG 4 cut(s) 141, 950, 1297, 1444
BstFNI CGCG 1 cut(s) 426
BstH2I RGCGCY 3 cut(s) 133, 295, 384
BstHHI GCGC 5 cut(s) 132, 294, 351, 383, 426
BstKTI GATC 8 cut(s) 200, 228, 366, 441, 561, 709, 883, 1285
BstMAI GTCTC 5 cut(s) 198, 725, 1082, 1512, 1540
BstMBI GATC 8 cut(s) 197, 225, 363, 438, 558, 706, 880, 1282
BstMCI CGRYCG 2 cut(s) 412, 1186
BstMWI GCNNNNNNNGC 7 cut(s) 47, 348, 432, 578, 655, 975, 1583
BstNI CCWGG 2 cut(s) 857, 1350
BstNSI RCATGY 2 cut(s) 643, 1325
BstPAI GACNNNNGTC 1 cut(s) 1182
BstPI GGTNACC 2 cut(s) 94, 1562
BstSCI CCNGG 7 cut(s) 21, 120, 383, 763, 855, 985, 1348
BstSFI CTRYAG 1 cut(s) 713
BstSLI GKGCMC 2 cut(s) 33, 914
BstUI CGCG 1 cut(s) 426
BstV1I GCAGC 2 cut(s) 727, 1564
BstX2I RGATCY 2 cut(s) 558, 880
BstXI CCANNNNNNTGG 2 cut(s) 625, 848
BstYI RGATCY 2 cut(s) 558, 880
Bsu36I CCTNAGG 1 cut(s) 723
BsuRI GGCC 7 cut(s) 41, 89, 216, 357, 1161, 1426, 1475
BtgI CCRYGG 2 cut(s) 83, 211
BtgZI GCGATG 1 cut(s) 145
BtsCI GGATG 4 cut(s) 141, 950, 1297, 1444
BtsIMutI CAGTG 1 cut(s) 1431
BveI ACCTGC 2 cut(s) 123, 1109
Cac8I GCNNGC 6 cut(s) 29, 48, 172, 574, 651, 1319
CaiI CAGNNNCTG 2 cut(s) 133, 1013
CfoI GCGC 5 cut(s) 132, 294, 351, 383, 426
Cfr10I RCCGGY 3 cut(s) 294, 374, 586
Csp6I GTAC 3 cut(s) 112, 866, 1080
CviAII CATG 7 cut(s) 418, 640, 1025, 1322, 1363, 1531, 1597
CviQI GTAC 3 cut(s) 112, 866, 1080
DdeI CTNAG 6 cut(s) 338, 723, 794, 1086, 1209, 1434
DinI GGCGCC 1 cut(s) 382
DpnI GATC 8 cut(s) 199, 227, 365, 440, 560, 708, 882, 1284
DpnII GATC 8 cut(s) 197, 225, 363, 438, 558, 706, 880, 1282
DriI GACNNNNNGTC 2 cut(s) 256, 524
EaeI YGGCCR 1 cut(s) 214
Eam1105I GACNNNNNGTC 2 cut(s) 256, 524
Ecl136II GAGCTC 1 cut(s) 668
Eco24I GRGCYC 2 cut(s) 8, 670
Eco31I GGTCTC 2 cut(s) 725, 1540
Eco32I GATATC 1 cut(s) 1465
Eco47I GGWCC 7 cut(s) 331, 396, 589, 851, 943, 1328, 1384
Eco53kI GAGCTC 1 cut(s) 668
Eco57I CTGAAG 2 cut(s) 365, 1528
Eco81I CCTNAGG 1 cut(s) 723
Eco88I CYCGRG 2 cut(s) 1162, 1340
Eco91I GGTNACC 2 cut(s) 94, 1562
EcoICRI GAGCTC 1 cut(s) 668
EcoO109I RGGNCCY 3 cut(s) 331, 355, 396
EcoO65I GGTNACC 2 cut(s) 94, 1562
EcoRI GAATTC 1 cut(s) 1355
EcoRII CCWGG 2 cut(s) 855, 1348
EcoRV GATATC 1 cut(s) 1465
EcoT38I GRGCYC 2 cut(s) 8, 670
EgeI GGCGCC 1 cut(s) 382
EheI GGCGCC 1 cut(s) 382
Esp3I CGTCTC 1 cut(s) 198
FaeI CATG 7 cut(s) 421, 643, 1028, 1325, 1366, 1534, 1600
FalI AAGNNNNNCTT 4 cut(s) 236, 268, 1470, 1502
FaqI GGGAC 4 cut(s) 317, 382, 746, 1533
FatI CATG 7 cut(s) 417, 639, 1024, 1321, 1362, 1530, 1596
FauI CCCGC 9 cut(s) 20, 55, 107, 317, 342, 586, 651, 877, 1452
FblI GTMKAC 5 cut(s) 408, 447, 552, 699, 918
Fnu4HI GCNGC 5 cut(s) 379, 427, 716, 1304, 1578
FokI GGATG 4 cut(s) 128, 937, 1304, 1451
FriOI GRGCYC 2 cut(s) 8, 670
Fsp4HI GCNGC 5 cut(s) 379, 427, 716, 1304, 1578
FspBI CTAG 2 cut(s) 501, 1140
GlaI GCGC 5 cut(s) 131, 293, 350, 382, 425
GluI GCNGC 5 cut(s) 379, 427, 716, 1304, 1578
GsaI CCCAGC 3 cut(s) 46, 234, 647
HaeII RGCGCY 3 cut(s) 133, 295, 384
HaeIII GGCC 7 cut(s) 41, 89, 216, 357, 1161, 1426, 1475
HhaI GCGC 5 cut(s) 132, 294, 351, 383, 426
Hin1I GRCGYC 2 cut(s) 381, 525
Hin1II CATG 7 cut(s) 421, 643, 1028, 1325, 1366, 1534, 1600
Hin6I GCGC 5 cut(s) 130, 292, 349, 381, 424
HinP1I GCGC 5 cut(s) 130, 292, 349, 381, 424
HincII GTYRAC 5 cut(s) 306, 409, 448, 553, 681
HindII GTYRAC 5 cut(s) 306, 409, 448, 553, 681
HinfI GANTC 3 cut(s) 257, 504, 1521
HphI GGTGA 9 cut(s) 106, 169, 364, 451, 779, 1256, 1351, 1364, 1574
Hpy188III TCNNGA 4 cut(s) 195, 361, 730, 1342
HpyAV CCTTC 6 cut(s) 322, 459, 463, 1216, 1307, 1493
HpyCH4III ACNGT 5 cut(s) 916, 959, 1184, 1237, 1244
HpyCH4IV ACGT 6 cut(s) 477, 525, 747, 846, 1275, 1552
HpyCH4V TGCA 5 cut(s) 715, 912, 1173, 1376, 1409
HpyF10VI GCNNNNNNNGC 7 cut(s) 47, 348, 432, 578, 655, 975, 1583
HpyF3I CTNAG 6 cut(s) 338, 723, 794, 1086, 1209, 1434
HpySE526I ACGT 6 cut(s) 477, 525, 747, 846, 1275, 1552
Hsp92I GRCGYC 2 cut(s) 381, 525
Hsp92II CATG 7 cut(s) 421, 643, 1028, 1325, 1366, 1534, 1600
HspAI GCGC 5 cut(s) 130, 292, 349, 381, 424
KasI GGCGCC 1 cut(s) 380
KflI GGGWCCC 1 cut(s) 396
Kpn2I TCCGGA 1 cut(s) 360
KpnI GGTACC 2 cut(s) 115, 869
Kzo9I GATC 8 cut(s) 197, 225, 363, 438, 558, 706, 880, 1282
LmnI GCTCC 4 cut(s) 10, 123, 421, 665
Lsp1109I GCAGC 2 cut(s) 727, 1564
LweI GCATC 3 cut(s) 824, 1290, 1396
MaeI CTAG 2 cut(s) 501, 1140
MaeII ACGT 6 cut(s) 477, 525, 747, 846, 1275, 1552
MaeIII GTNAC 4 cut(s) 94, 370, 1196, 1562
MalI GATC 8 cut(s) 199, 227, 365, 440, 560, 708, 882, 1284
MboI GATC 8 cut(s) 197, 225, 363, 438, 558, 706, 880, 1282
MboII GAAGA 2 cut(s) 448, 1549
MfeI CAATTG 1 cut(s) 1395
MflI RGATCY 2 cut(s) 558, 880
MhlI GDGCHC 4 cut(s) 8, 33, 670, 914
MluCI AATT 7 cut(s) 310, 316, 451, 509, 782, 1355, 1395
Mly113I GGCGCC 1 cut(s) 381
MlyI GAGTC 2 cut(s) 266, 1515
MmeI TCCRAC 7 cut(s) 78, 541, 643, 829, 974, 978, 1306
MroI TCCGGA 1 cut(s) 360
MseI TTAA 1 cut(s) 512
MslI CAYNNNNRTG 1 cut(s) 1595
MspA1I CMGCKG 1 cut(s) 337
MspR9I CCNGG 7 cut(s) 23, 122, 385, 765, 857, 987, 1350
MunI CAATTG 1 cut(s) 1395
MvaI CCWGG 2 cut(s) 857, 1350
MvnI CGCG 1 cut(s) 426
MwoI GCNNNNNNNGC 7 cut(s) 47, 348, 432, 578, 655, 975, 1583
NarI GGCGCC 1 cut(s) 381
NciI CCSGG 5 cut(s) 23, 122, 385, 765, 987
NdeII GATC 8 cut(s) 197, 225, 363, 438, 558, 706, 880, 1282
NlaIII CATG 7 cut(s) 421, 643, 1028, 1325, 1366, 1534, 1600
NmuCI GTSAC 3 cut(s) 94, 370, 1562
NspI RCATGY 2 cut(s) 643, 1325
NspV TTCGAA 1 cut(s) 507
PaqCI CACCTGC 1 cut(s) 1109
PasI CCCWGGG 1 cut(s) 856
PcsI WCGNNNNNNNCGW 2 cut(s) 246, 528
PfeI GAWTC 1 cut(s) 504
Pfl23II CGTACG 1 cut(s) 1079
PflFI GACNNNGTC 2 cut(s) 239, 527
PflMI CCANNNNNTGG 2 cut(s) 862, 1013
PfoI TCCNGGA 1 cut(s) 120
PkrI GCNGC 5 cut(s) 380, 428, 717, 1305, 1579
PleI GAGTC 2 cut(s) 265, 1515
PluTI GGCGCC 1 cut(s) 384
PpsI GAGTC 2 cut(s) 265, 1515
PpuMI RGGWCCY 2 cut(s) 331, 396
PshAI GACNNNNGTC 1 cut(s) 1182
PshBI ATTAAT 1 cut(s) 512
Psp124BI GAGCTC 1 cut(s) 670
Psp1406I AACGTT 1 cut(s) 477
Psp5II RGGWCCY 2 cut(s) 331, 396
Psp6I CCWGG 2 cut(s) 855, 1348
PspEI GGTNACC 2 cut(s) 94, 1562
PspFI CCCAGC 3 cut(s) 42, 230, 643
PspGI CCWGG 2 cut(s) 855, 1348
PspLI CGTACG 1 cut(s) 1079
PspPPI RGGWCCY 2 cut(s) 331, 396
PstI CTGCAG 1 cut(s) 717
PstNI CAGNNNCTG 2 cut(s) 133, 1013
PsuI RGATCY 2 cut(s) 558, 880
PsyI GACNNNGTC 2 cut(s) 239, 527
RsaI GTAC 3 cut(s) 113, 867, 1081
RsaNI GTAC 3 cut(s) 112, 866, 1080
RseI CAYNNNNRTG 1 cut(s) 1595
SacI GAGCTC 1 cut(s) 670
SalI GTCGAC 3 cut(s) 407, 446, 551
SaqAI TTAA 1 cut(s) 512
SatI GCNGC 5 cut(s) 379, 427, 716, 1304, 1578
Sau3AI GATC 8 cut(s) 197, 225, 363, 438, 558, 706, 880, 1282
SchI GAGTC 2 cut(s) 266, 1515
ScrFI CCNGG 7 cut(s) 23, 122, 385, 765, 857, 987, 1350
SduI GDGCHC 4 cut(s) 8, 33, 670, 914
SfaNI GCATC 3 cut(s) 824, 1290, 1396
SfcI CTRYAG 1 cut(s) 713
SfoI GGCGCC 1 cut(s) 382
SfuI TTCGAA 1 cut(s) 507
SgrAI CRCCGGYG 1 cut(s) 374
SinI GGWCC 7 cut(s) 331, 396, 589, 851, 943, 1328, 1384
SmiMI CAYNNNNRTG 1 cut(s) 1595
Sse9I AATT 7 cut(s) 310, 316, 451, 509, 782, 1355, 1395
SspDI GGCGCC 1 cut(s) 380
SspMI CTAG 2 cut(s) 501, 1140
SstI GAGCTC 1 cut(s) 670
StyD4I CCNGG 7 cut(s) 21, 120, 383, 763, 855, 985, 1348
TaaI ACNGT 5 cut(s) 916, 959, 1184, 1237, 1244
TaiI ACGT 6 cut(s) 480, 528, 750, 849, 1278, 1555
TasI AATT 7 cut(s) 310, 316, 451, 509, 782, 1355, 1395
TauI GCSGC 3 cut(s) 381, 429, 1306
TfiI GAWTC 1 cut(s) 504
Tru1I TTAA 1 cut(s) 512
Tru9I TTAA 1 cut(s) 512
TscAI CASTG 1 cut(s) 1438
TseFI GTSAC 3 cut(s) 94, 370, 1562
TseI GCWGC 2 cut(s) 715, 1577
Tsp45I GTSAC 3 cut(s) 94, 370, 1562
TspDTI ATGAA 2 cut(s) 130, 887
TspGWI ACGGA 1 cut(s) 892
TspRI CASTG 1 cut(s) 1438
Tth111I GACNNNGTC 2 cut(s) 239, 527
Van91I CCANNNNNTGG 2 cut(s) 862, 1013
VneI GTGCAC 1 cut(s) 910
VpaK11BI GGWCC 7 cut(s) 331, 396, 589, 851, 943, 1328, 1384
VspI ATTAAT 1 cut(s) 512
XapI RAATTY 1 cut(s) 1355
XceI RCATGY 2 cut(s) 643, 1325
XcmI CCANNNNNNNNNTGG 1 cut(s) 845
XmiI GTMKAC 5 cut(s) 408, 447, 552, 699, 918
XspI CTAG 2 cut(s) 501, 1140
ZraI GACGTC 1 cut(s) 526
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.