Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0001536

Physical Location & Seq

Genomic Coordinates Forward (+)

21854590 .. 21858507

Gene Structure 3918 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g27590.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1503 bp

ATGTCGTCGACCCAGAACCGCCGGTCAGGTTTTCCGTCGTCGTCGCTGGCCAAGCGGCAGGCTTCGTCGTCGTCCTCGAATGTGGGGAAGTTTCCGGTGGCGGAGCCCAGATTGGCCAAGAAGCGAGCACCGTTGAGTAATCTGACCAATCGGAGCAATGTGGGGGCCGGTAGTGCTTCGAAGAGTGCGTTGGTACCTTGTAAGATTGCCAAAGTGAAGAAGGGATCACCTGCTAGCACCAGTAATAGAGGAATCTCAGGGAGTAATGTACCTGCTGCTTCGTGCAGTGTTAAACCAAGTACTATTGTTCTACCGAAAGTGACTGCTGTCCAAAGAAGTGATGAGGTTTTCCCAAAGTCTACATCTGTCCAAAGGAGTGGAGAAGCTGCCCCTATCTCAGTTGTCATACCTGTCCCCTGTAACATGGATGAATCTCCAAGTAAATCGGATGGAGATTCTGTTTCTATGGATGAGACAATGTCGACTTGTGATTCTTTCAAGAGTCCGCAAGTGGAGTACATCGATAACAATGATGTTCAAGCAATTGATTCTATTAACCGAAAGACATTCAGCCACCTCCACATCTCAGACCAACCAGAAACTACAGGGATCGTCTGCAGTAGGGAACTACTTGTGGAGTTGGAAGGAGATGGTAGTGTTGCGGACATTGATAACCGTTTCATGGATCCACAGCTCTGTGCAACCTTTGCTTGTGATATTTACAAGCACTTGCGTGCTTCTGAGGTGAAGAAAAGGCCTTCCACAGATTACATGGACAAAATTCAGAAAGACATTAATCCAAGCATGCGTGCAATACTTGTTGATTGGCTTGTGGAGGTGGCTGAAGAATACAGGCTTGTACCTGATACATTGTATCTGACTGTGAACTACATAGACCGATATCTTACAGGGAACCCTATGAATAGACAACGGTTACAGTTACTTGGTGTTGCTTGTATGATGATTGCATCAAAATATGAAGAGATCTGTGCACCCCAGGTTGAAGAGTTTTGTTACATTACTGACAACACATATTTCAAGGAAGAAGTTTTGGAAATGGAATCTTCTGTTTTGAATTACTTGAAGTTTGAAATGACAGCCGCAACAACCAAATGCTTCTTAAGGCGATTTGTTCGCGCTGCTCAAGGGGTCAATGAGCTTCCATCAATGCAGTTGGAGTGCTTGGCAAACTATCTTGCAGAACTATCACTTCTAGATTACAGCATGCTTTCTTATGCTCCATCACTTGTAGCTGCTTCTGCAATATTCCTGGCGAATTACATAACACTCCCCTCAAAGAGACCATGGAATGCTACCTTGCAGCATTACACACTATACCAGCCTTCGGATTTGCGTGAATGCGTCAAGGATCTCCATCGCCTATGTTGTGATAACCAGAATTCTAGTTTACCTGCTATCAGAGAGAAATACAGTCAGCATAAGTACAAGTATGTAGCCAAGATGTACTGCCCACCAACAATCCCTAAAGAGTACCAAGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000280 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006996 GO:0007049 GO:0007135 GO:0007140 GO:0007275 GO:0007276 GO:0008150 GO:0009555 GO:0009556 GO:0009987 GO:0016043 GO:0019953 GO:0022402 GO:0022412 GO:0022414 GO:0032501 GO:0032502 GO:0032504 GO:0034293 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043934 GO:0044424 GO:0044464 GO:0044703 GO:0048229 GO:0048232 GO:0048236 GO:0048285 GO:0048609 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051321 GO:0051445 GO:0051704 GO:0051726 GO:0061983 GO:0065007 GO:0071840 GO:0140013 GO:1903046 GO:2000241

KEGG Pathways

Metabolic & Signaling

ko04110 ko04152 ko04218 ko04914 ko05161 ko05165 ko05169 ko05203 map04110 map04152 map04218 map04914 map05161 map05165 map05169 map05203

Pfam Domains

Protein Families

Cyclin_C Cyclin_N

Protein Analysis

501

Amino Acids

55.58

Weight (kDa)

7.79

Isoelectric Point (pI)

54.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cyclin_N	PF00134	239 - 366	3.5e-50	Cyclin, N-terminal domain
Cyclin_C	PF02984	369 - 489	4e-37	Cyclin, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001536)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G44110
fragaria_vesca	FvH4_1g09410 FvH4_2g27580 FvH4_2g27580 FvH4_2g27590
malus_domestica	MD00G1156900.v1.1 MD15G1344200.v1.1 MD15G1344300.v1.1
prunus_persica	Prupe.1G491700_v2.0.a1 Prupe.1G491800_v2.0.a1 Prupe.1G491800_v2.0.a1 Prupe.1G491800_v2.0.a1
pyrus_communis	pycom116g00040 pycom15g30740 pycom15g30750
rosa_chinensis	RchiOBHm_Chr2g0095961 RchiOBHm_Chr6g0296421 RchiOBHm_Chr6g0296431
rosa_laevigata	RLG00000011694 RLG00000011695 RLG00000016611
rosa_multiflora	Rmu_sc0002497.1_g000006 Rmu_sc0004084.1_g000046 Rmu_sc0004487.1_g000017 Rmu_sc0008096.1_g000016 Rmu_sc0019394.1_g000001 Rmu_sc0033856.1_g000002 Rmu_sc0034769.1_g000001
rosa_roxburghii	Rroxscaffold_2G00145910 Rroxscaffold_7G00171540 Rroxscaffold_7G00171550 Rroxscaffold_7G00178580 Rroxscaffold_7G00178590
rosa_rugosa	Rorug02G0055400 Rorug06G0262300 Rorug06G0262400 Rorug06G0262400 Rorug06G0262400
rosa_samantha	Rh2AG103400 Rh2BG104800 Rh2CG107400 Rh2DG105100 Rh6AG373400 Rh6AG373500 Rh6BG382100 Rh6BG382200 Rh6CG386900 Rh6DG374600
rosa_wichuraiana	Rw2G007870 Rw6G032580 Rw6G032590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	238
Acc36I	ACCTGC	3 cut(s)	238, 280, 1420
Acc65I	GGTACC	1 cut(s)	193
AccB1I	GGYRCC	1 cut(s)	193
AccI	GTMKAC	3 cut(s)	8, 359, 482
AccII	CGCG	1 cut(s)	1137
AciI	CCGC	6 cut(s)	19, 55, 101, 506, 662, 1101
AclWI	GGATC	5 cut(s)	232, 617, 680, 693, 1377
AcoI	YGGCCR	2 cut(s)	48, 114
AcsI	RAATTY	2 cut(s)	780, 1399
AcuI	CTGAAG	1 cut(s)	864
AfaI	GTAC	8 cut(s)	195, 270, 301, 518, 861, 1445, 1466, 1493
AfiI	CCNNNNNNNGG	2 cut(s)	682, 1345
AflII	CTTAAG	1 cut(s)	1120
AgsI	TTSAA	7 cut(s)	499, 539, 1004, 1039, 1075, 1084, 1091
AjnI	CCWGG	2 cut(s)	996, 1269
AjuI	GAANNNNNNNTTGG	2 cut(s)	173, 205
AleI	CACNNNNGTG	1 cut(s)	732
AluBI	AGCT	4 cut(s)	386, 694, 1159, 1253
AluI	AGCT	4 cut(s)	386, 694, 1159, 1253
Alw21I	GWGCWC	2 cut(s)	130, 994
Alw26I	GTCTC	2 cut(s)	467, 1294
Alw44I	GTGCAC	1 cut(s)	990
AlwI	GGATC	5 cut(s)	232, 617, 680, 693, 1377
AoxI	GGCC	4 cut(s)	48, 114, 165, 755
ApaLI	GTGCAC	1 cut(s)	990
ApeKI	GCWGC	5 cut(s)	275, 386, 1139, 1253, 1321
ApoI	RAATTY	2 cut(s)	780, 1399
AseI	ATTAAT	1 cut(s)	795
Asp718I	GGTACC	1 cut(s)	193
AspLEI	GCGC	1 cut(s)	1139
AspS9I	GGNCC	1 cut(s)	165
AsuHPI	GGTGA	2 cut(s)	219, 757
AsuII	TTCGAA	1 cut(s)	179
AsuNHI	GCTAGC	1 cut(s)	233
BaeGI	GKGCMC	1 cut(s)	994
BalI	TGGCCA	2 cut(s)	50, 116
BamHI	GGATCC	1 cut(s)	685
BanI	GGYRCC	1 cut(s)	193
BanII	GRGCYC	1 cut(s)	108
Bbv12I	GWGCWC	2 cut(s)	130, 994
BbvI	GCAGC	5 cut(s)	262, 373, 1126, 1240, 1333
BccI	CCATC	5 cut(s)	443, 644, 1171, 1249, 1383
BciT130I	CCWGG	2 cut(s)	998, 1271
BcoDI	GTCTC	2 cut(s)	467, 1294
BfaI	CTAG	3 cut(s)	234, 1214, 1404
BfmI	CTRYAG	2 cut(s)	603, 616
BfrI	CTTAAG	1 cut(s)	1120
BfuAI	ACCTGC	3 cut(s)	238, 280, 1420
BglII	AGATCT	1 cut(s)	984
BisI	GCNGC	7 cut(s)	56, 276, 387, 1101, 1140, 1254, 1322
BlsI	GCNGC	7 cut(s)	57, 277, 388, 1102, 1141, 1255, 1323
BmcAI	AGTACT	1 cut(s)	301
Bme1390I	CCNGG	2 cut(s)	998, 1271
BmgT120I	GGNCC	1 cut(s)	165
BmiI	GGNNCC	5 cut(s)	105, 166, 195, 687, 914
BmrFI	CCNGG	2 cut(s)	998, 1271
BmsI	GCATC	1 cut(s)	977
BmtI	GCTAGC	1 cut(s)	237
BoxI	GACNNNNGTC	1 cut(s)	326
Bpu14I	TTCGAA	1 cut(s)	179
BpuEI	CTTGAG	1 cut(s)	1128
Bsa29I	ATCGAT	1 cut(s)	522
BsaBI	GATNNNNATC	1 cut(s)	1374
BsaI	GGTCTC	1 cut(s)	1294
BsaJI	CCNNGG	2 cut(s)	996, 1304
BsaWI	WCCGGW	1 cut(s)	94
BsaXI	ACNNNNNCTCC	2 cut(s)	444, 474
Bsc4I	CCNNNNNNNGG	2 cut(s)	682, 1345
Bse118I	RCCGGY	2 cut(s)	21, 167
Bse1I	ACTGG	1 cut(s)	240
Bse3DI	GCAATG	1 cut(s)	163
Bse8I	GATNNNNATC	1 cut(s)	1374
BseBI	CCWGG	2 cut(s)	998, 1271
BseCI	ATCGAT	1 cut(s)	522
BseDI	CCNNGG	2 cut(s)	996, 1304
BseGI	GGATG	3 cut(s)	433, 454, 475
BseJI	GATNNNNATC	1 cut(s)	1374
BseLI	CCNNNNNNNGG	2 cut(s)	682, 1345
BseMI	GCAATG	1 cut(s)	163
BseMII	CTCAG	4 cut(s)	270, 411, 600, 732
BseNI	ACTGG	1 cut(s)	240
BseSI	GKGCMC	1 cut(s)	994
BseXI	GCAGC	5 cut(s)	262, 373, 1126, 1240, 1333
BsgI	GTGCAG	1 cut(s)	304
Bsh1236I	CGCG	1 cut(s)	1137
BshFI	GGCC	4 cut(s)	50, 116, 167, 757
BshNI	GGYRCC	1 cut(s)	193
BshVI	ATCGAT	1 cut(s)	522
BsiHKAI	GWGCWC	2 cut(s)	130, 994
BsiSI	CCGG	3 cut(s)	22, 95, 168
BslFI	GGGAC	1 cut(s)	398
BslI	CCNNNNNNNGG	2 cut(s)	682, 1345
BsmAI	GTCTC	2 cut(s)	467, 1294
BsmFI	GGGAC	1 cut(s)	398
BsmI	GAATGC	2 cut(s)	1315, 1364
BsnI	GGCC	4 cut(s)	50, 116, 167, 757
Bso31I	GGTCTC	1 cut(s)	1294
Bsp119I	TTCGAA	1 cut(s)	179
Bsp1286I	GDGCHC	3 cut(s)	108, 130, 994
Bsp143I	GATC	5 cut(s)	224, 609, 685, 984, 1369
Bsp19I	CCATGG	1 cut(s)	1304
BspACI	CCGC	6 cut(s)	19, 55, 101, 506, 662, 1101
BspANI	GGCC	4 cut(s)	50, 116, 167, 757
BspCNI	CTCAG	4 cut(s)	269, 410, 599, 733
BspDI	ATCGAT	1 cut(s)	522
BspFNI	CGCG	1 cut(s)	1137
BspLI	GGNNCC	5 cut(s)	105, 166, 195, 687, 914
BspMAI	CTGCAG	1 cut(s)	620
BspMI	ACCTGC	3 cut(s)	238, 280, 1420
BspOI	GCTAGC	1 cut(s)	237
BspPI	GGATC	5 cut(s)	232, 617, 680, 693, 1377
BspT104I	TTCGAA	1 cut(s)	179
BspT107I	GGYRCC	1 cut(s)	193
BspTI	CTTAAG	1 cut(s)	1120
BspTNI	GGTCTC	1 cut(s)	1294
BsrDI	GCAATG	1 cut(s)	163
BsrFI	RCCGGY	2 cut(s)	21, 167
BsrI	ACTGG	1 cut(s)	240
BssAI	RCCGGY	2 cut(s)	21, 167
BssECI	CCNNGG	2 cut(s)	996, 1304
BssMI	GATC	5 cut(s)	224, 609, 685, 984, 1369
BssT1I	CCWWGG	1 cut(s)	1304
Bst2UI	CCWGG	2 cut(s)	998, 1271
Bst4CI	ACNGT	6 cut(s)	132, 677, 883, 933, 939, 1433
Bst6I	CTCTTC	3 cut(s)	176, 975, 999
BstAFI	CTTAAG	1 cut(s)	1120
BstAPI	GCANNNNNTGC	1 cut(s)	707
BstBI	TTCGAA	1 cut(s)	179
BstC8I	GCNNGC	8 cut(s)	48, 60, 126, 235, 735, 806, 810, 1226
BstDEI	CTNAG	4 cut(s)	256, 397, 586, 741
BstDSI	CCRYGG	1 cut(s)	1304
BstF5I	GGATG	3 cut(s)	433, 454, 475
BstFNI	CGCG	1 cut(s)	1137
BstHHI	GCGC	1 cut(s)	1139
BstKTI	GATC	5 cut(s)	227, 612, 688, 987, 1372
BstMAI	GTCTC	2 cut(s)	467, 1294
BstMBI	GATC	5 cut(s)	224, 609, 685, 984, 1369
BstMWI	GCNNNNNNNGC	4 cut(s)	52, 173, 707, 1259
BstNI	CCWGG	2 cut(s)	998, 1271
BstNSI	RCATGY	2 cut(s)	808, 1228
BstPAI	GACNNNNGTC	1 cut(s)	326
BstSCI	CCNGG	2 cut(s)	996, 1269
BstSFI	CTRYAG	2 cut(s)	603, 616
BstSLI	GKGCMC	1 cut(s)	994
BstUI	CGCG	1 cut(s)	1137
BstV1I	GCAGC	5 cut(s)	262, 373, 1126, 1240, 1333
BstX2I	RGATCY	3 cut(s)	685, 984, 1369
BstXI	CCANNNNNNTGG	1 cut(s)	377
BstYI	RGATCY	3 cut(s)	685, 984, 1369
Bsu15I	ATCGAT	1 cut(s)	522
BsuRI	GGCC	4 cut(s)	50, 116, 167, 757
BsuTUI	ATCGAT	1 cut(s)	522
BtgI	CCRYGG	1 cut(s)	1304
BtgZI	GCGATG	1 cut(s)	1361
BtsCI	GGATG	3 cut(s)	433, 454, 475
BtsI	GCAGTG	1 cut(s)	292
BtsIMutI	CAGTG	1 cut(s)	292
BveI	ACCTGC	3 cut(s)	238, 280, 1420
Cac8I	GCNNGC	8 cut(s)	48, 60, 126, 235, 735, 806, 810, 1226
CfoI	GCGC	1 cut(s)	1139
Cfr10I	RCCGGY	2 cut(s)	21, 167
Cfr13I	GGNCC	1 cut(s)	165
ClaI	ATCGAT	1 cut(s)	522
CseI	GACGC	1 cut(s)	1351
Csp6I	GTAC	8 cut(s)	194, 269, 300, 517, 860, 1444, 1465, 1492
CviAII	CATG	6 cut(s)	424, 682, 772, 805, 1225, 1305
CviQI	GTAC	8 cut(s)	194, 269, 300, 517, 860, 1444, 1465, 1492
DdeI	CTNAG	4 cut(s)	256, 397, 586, 741
DpnI	GATC	5 cut(s)	226, 611, 687, 986, 1371
DpnII	GATC	5 cut(s)	224, 609, 685, 984, 1369
EaeI	YGGCCR	2 cut(s)	48, 114
Eam1104I	CTCTTC	3 cut(s)	176, 975, 999
EarI	CTCTTC	3 cut(s)	176, 975, 999
EciI	GGCGGA	1 cut(s)	116
Eco130I	CCWWGG	1 cut(s)	1304
Eco147I	AGGCCT	1 cut(s)	757
Eco24I	GRGCYC	1 cut(s)	108
Eco31I	GGTCTC	1 cut(s)	1294
Eco32I	GATATC	1 cut(s)	902
Eco57I	CTGAAG	1 cut(s)	864
EcoRI	GAATTC	1 cut(s)	1399
EcoRII	CCWGG	2 cut(s)	996, 1269
EcoRV	GATATC	1 cut(s)	902
EcoT14I	CCWWGG	1 cut(s)	1304
EcoT38I	GRGCYC	1 cut(s)	108
ErhI	CCWWGG	1 cut(s)	1304
FaeI	CATG	6 cut(s)	427, 685, 775, 808, 1228, 1308
FaqI	GGGAC	1 cut(s)	398
FatI	CATG	6 cut(s)	423, 681, 771, 804, 1224, 1304
FblI	GTMKAC	3 cut(s)	8, 359, 482
Fnu4HI	GCNGC	7 cut(s)	56, 276, 387, 1101, 1140, 1254, 1322
FokI	GGATG	3 cut(s)	440, 461, 482
FriOI	GRGCYC	1 cut(s)	108
Fsp4HI	GCNGC	7 cut(s)	56, 276, 387, 1101, 1140, 1254, 1322
FspBI	CTAG	3 cut(s)	234, 1214, 1404
GlaI	GCGC	1 cut(s)	1138
GluI	GCNGC	7 cut(s)	56, 276, 387, 1101, 1140, 1254, 1322
HaeIII	GGCC	4 cut(s)	50, 116, 167, 757
HapII	CCGG	3 cut(s)	22, 95, 168
HgaI	GACGC	1 cut(s)	1351
HhaI	GCGC	1 cut(s)	1139
Hin1II	CATG	6 cut(s)	427, 685, 775, 808, 1228, 1308
Hin6I	GCGC	1 cut(s)	1137
HinP1I	GCGC	1 cut(s)	1137
HincII	GTYRAC	2 cut(s)	9, 483
HindII	GTYRAC	2 cut(s)	9, 483
HinfI	GANTC	7 cut(s)	252, 431, 455, 491, 502, 548, 1061
HpaII	CCGG	3 cut(s)	22, 95, 168
HphI	GGTGA	2 cut(s)	219, 757
Hpy166II	GTNNAC	6 cut(s)	9, 360, 483, 886, 992, 1409
Hpy188I	TCNGA	9 cut(s)	144, 153, 448, 589, 742, 786, 879, 1348, 1421
Hpy188III	TCNNGA	2 cut(s)	499, 1214
Hpy8I	GTNNAC	6 cut(s)	9, 360, 483, 886, 992, 1409
Hpy99I	CGWCG	6 cut(s)	10, 40, 43, 46, 70, 73
HpyAV	CCTTC	4 cut(s)	214, 638, 768, 1353
HpyCH4III	ACNGT	6 cut(s)	132, 677, 883, 933, 939, 1433
HpyF10VI	GCNNNNNNNGC	4 cut(s)	52, 173, 707, 1259
HpyF3I	CTNAG	4 cut(s)	256, 397, 586, 741
Hsp92II	CATG	6 cut(s)	427, 685, 775, 808, 1228, 1308
HspAI	GCGC	1 cut(s)	1137
KpnI	GGTACC	1 cut(s)	197
Kzo9I	GATC	5 cut(s)	224, 609, 685, 984, 1369
LmnI	GCTCC	3 cut(s)	103, 153, 1243
Lsp1109I	GCAGC	5 cut(s)	262, 373, 1126, 1240, 1333
LweI	GCATC	1 cut(s)	977
MaeI	CTAG	3 cut(s)	234, 1214, 1404
MaeIII	GTNAC	5 cut(s)	319, 419, 933, 939, 1013
MalI	GATC	5 cut(s)	226, 611, 687, 986, 1371
MboI	GATC	5 cut(s)	224, 609, 685, 984, 1369
MboII	GAAGA	8 cut(s)	193, 229, 760, 857, 992, 1016, 1055, 1056
MfeI	CAATTG	1 cut(s)	543
MflI	RGATCY	3 cut(s)	685, 984, 1369
MhlI	GDGCHC	3 cut(s)	108, 130, 994
MlsI	TGGCCA	2 cut(s)	50, 116
MluCI	AATT	5 cut(s)	543, 780, 1075, 1276, 1399
MluNI	TGGCCA	2 cut(s)	50, 116
MlyI	GAGTC	1 cut(s)	511
MmeI	TCCRAC	2 cut(s)	621, 1155
MnlI	CCTC	7 cut(s)	85, 242, 337, 587, 736, 829, 1303
Mox20I	TGGCCA	2 cut(s)	50, 116
MscI	TGGCCA	2 cut(s)	50, 116
MseI	TTAA	4 cut(s)	291, 555, 795, 1121
MslI	CAYNNNNRTG	1 cut(s)	732
Msp20I	TGGCCA	2 cut(s)	50, 116
MspCI	CTTAAG	1 cut(s)	1120
MspI	CCGG	3 cut(s)	22, 95, 168
MspR9I	CCNGG	2 cut(s)	998, 1271
MunI	CAATTG	1 cut(s)	543
Mva1269I	GAATGC	2 cut(s)	1315, 1364
MvaI	CCWGG	2 cut(s)	998, 1271
MvnI	CGCG	1 cut(s)	1137
MwoI	GCNNNNNNNGC	4 cut(s)	52, 173, 707, 1259
NcoI	CCATGG	1 cut(s)	1304
NdeII	GATC	5 cut(s)	224, 609, 685, 984, 1369
NheI	GCTAGC	1 cut(s)	233
NlaIII	CATG	6 cut(s)	427, 685, 775, 808, 1228, 1308
NlaIV	GGNNCC	5 cut(s)	105, 166, 195, 687, 914
NmuCI	GTSAC	1 cut(s)	319
NspI	RCATGY	2 cut(s)	808, 1228
NspV	TTCGAA	1 cut(s)	179
OliI	CACNNNNGTG	1 cut(s)	732
PaeI	GCATGC	2 cut(s)	808, 1228
PaqCI	CACCTGC	1 cut(s)	238
PceI	AGGCCT	1 cut(s)	757
PcsI	WCGNNNNNNNCGW	2 cut(s)	74, 185
PctI	GAATGC	2 cut(s)	1315, 1364
PfeI	GAWTC	6 cut(s)	252, 431, 455, 491, 548, 1061
PflFI	GACNNNGTC	1 cut(s)	478
PkrI	GCNGC	7 cut(s)	57, 277, 388, 1102, 1141, 1255, 1323
PleI	GAGTC	1 cut(s)	510
PpsI	GAGTC	1 cut(s)	510
PshAI	GACNNNNGTC	1 cut(s)	326
PshBI	ATTAAT	1 cut(s)	795
Psp6I	CCWGG	2 cut(s)	996, 1269
PspGI	CCWGG	2 cut(s)	996, 1269
PspN4I	GGNNCC	5 cut(s)	105, 166, 195, 687, 914
PspPI	GGNCC	1 cut(s)	165
PstI	CTGCAG	1 cut(s)	620
PsuI	RGATCY	3 cut(s)	685, 984, 1369
PsyI	GACNNNGTC	1 cut(s)	478
RsaI	GTAC	8 cut(s)	195, 270, 301, 518, 861, 1445, 1466, 1493
RsaNI	GTAC	8 cut(s)	194, 269, 300, 517, 860, 1444, 1465, 1492
RseI	CAYNNNNRTG	1 cut(s)	732
SalI	GTCGAC	2 cut(s)	7, 481
SaqAI	TTAA	4 cut(s)	291, 555, 795, 1121
SatI	GCNGC	7 cut(s)	56, 276, 387, 1101, 1140, 1254, 1322
Sau3AI	GATC	5 cut(s)	224, 609, 685, 984, 1369
Sau96I	GGNCC	1 cut(s)	165
ScaI	AGTACT	1 cut(s)	301
SchI	GAGTC	1 cut(s)	511
ScrFI	CCNGG	2 cut(s)	998, 1271
SduI	GDGCHC	3 cut(s)	108, 130, 994
SfaNI	GCATC	1 cut(s)	977
SfcI	CTRYAG	2 cut(s)	603, 616
SfuI	TTCGAA	1 cut(s)	179
SmiMI	CAYNNNNRTG	1 cut(s)	732
SmlI	CTYRAG	2 cut(s)	1120, 1143
SmoI	CTYRAG	2 cut(s)	1120, 1143
SphI	GCATGC	2 cut(s)	808, 1228
Sse9I	AATT	5 cut(s)	543, 780, 1075, 1276, 1399
SseBI	AGGCCT	1 cut(s)	757
SsiI	CCGC	6 cut(s)	19, 55, 101, 506, 662, 1101
SspI	AATATT	1 cut(s)	1266
SspMI	CTAG	3 cut(s)	234, 1214, 1404
StuI	AGGCCT	1 cut(s)	757
StyD4I	CCNGG	2 cut(s)	996, 1269
StyI	CCWWGG	1 cut(s)	1304
TaaI	ACNGT	6 cut(s)	132, 677, 883, 933, 939, 1433
TaqI	TCGA	5 cut(s)	8, 77, 179, 482, 522
TaqII	GACCGA	1 cut(s)	912
TasI	AATT	5 cut(s)	543, 780, 1075, 1276, 1399
TatI	WGTACW	4 cut(s)	299, 516, 1443, 1464
TauI	GCSGC	2 cut(s)	58, 1103
TfiI	GAWTC	6 cut(s)	252, 431, 455, 491, 548, 1061
Tru1I	TTAA	4 cut(s)	291, 555, 795, 1121
Tru9I	TTAA	4 cut(s)	291, 555, 795, 1121
TscAI	CASTG	1 cut(s)	292
TseFI	GTSAC	1 cut(s)	319
TseI	GCWGC	5 cut(s)	275, 386, 1139, 1253, 1321
Tsp45I	GTSAC	1 cut(s)	319
TspDTI	ATGAA	4 cut(s)	444, 670, 935, 993
TspGWI	ACGGA	1 cut(s)	24
TspRI	CASTG	1 cut(s)	292
Tth111I	GACNNNGTC	1 cut(s)	478
Vha464I	CTTAAG	1 cut(s)	1120
VneI	GTGCAC	1 cut(s)	990
VspI	ATTAAT	1 cut(s)	795
XapI	RAATTY	2 cut(s)	780, 1399
XbaI	TCTAGA	1 cut(s)	1213
XceI	RCATGY	2 cut(s)	808, 1228
XcmI	CCANNNNNNNNNTGG	1 cut(s)	769
XmiI	GTMKAC	3 cut(s)	8, 359, 482
XspI	CTAG	3 cut(s)	234, 1214, 1404
ZrmI	AGTACT	1 cut(s)	301

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.