Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0001536

Physical Location & Seq

Genomic Coordinates Reverse (-)

11788887 .. 11792043

Gene Structure 3157 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000011694

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1479 bp

ATGTCGACCCAGAACCGCCGATCAGCGTTTCCGGTGGCGAAGCGGCAGGCCTCGTCGTCGTCGAATGTCGGGAAGTTTCCGGTGGCTGAGCCCAGATTGGCCAAGAAGCGAGCGCCGTTGAGTAATCTGACGAATCGGAGCAATGTGTCCAATAGTGCTTCGAAGAGCTCGTTGGTACCATGCGCAAGTAAGATTGCCAAAGTGAAAAAGGGTTCTCCTGCTAGCGCCAGTAACAGAGGAAGTAATGTACCTGCTTCGTTCAATGTTAAACCAAGTGCAGTTGTTCTACCAAAAGTTACTTCTATCCAAAGGAGTGATGAAGTTTTCCCAAAGTTTACCTCTGTCCAAAGGAATGAAGAAGCTGCTCCCAGCTCCATTGCCATTCCTGTCCCCTGTAACATGGATGATTCTCCAAGTAAATCGGATGGAGATTCAGTTTCTATGGATGAGACAATGTCAACTTGTGATTCTTTTAAGAGTCCGCAAGTTGAGTACATAGATAACAATGATGTTCAAGGTATTGATTCTATTGATCGAAAGACATTCAGCCACCTCCACATTTCAGACCATGCAGAAACAACAGGGATTGTCTGCAGTAGGGAACTACTTGTGGAGTTGGAAGGAGATGGTAGCATTGCTGACATTGATAACCGTTTCATGGATCCACAGCTCTGTGCAACCTTTGCTTGTGATATCTACAAGCATTTGCGTGCATCTGAGGTGAAGAAAAGGCCTTCCACAGATTACATGGACAAAATTCAGAAGGACATTAACCCGAGCATGCGTGCAATACTTGTTGACTGGCTTGTGGAGGTGGCTGAAGAGTACAGGCTTGTACCCGATACATTATATTTGACTGTGAACTACATAGACCGATATCTTTCAGGGAACCCTATGAATAGACAACGGTTACAGTTACTTGGTGTTGCTTGTATGATGATTGCATCAAAATATGAGGAGATCTGTGCACCCCAGGTTGAAGAGTTTTGTTACATTACTGATAACACATATTTCAAGGAAGAGGTCTTGGAAATGGAATCTTCTGTTTTGAATTACTTGAAGTTTGAAATGACAGCCGCAACAACTAAATGTTTCTTAAGGCGATTTGTTCGTGCTGCTCAAGGGGCCAATGAGCTTCCATCAATGCAGCTGGAGTGCTTGGCAAACTACCTTGCAGAACTATCTCTTCTAGATTACAGCATGCTTTCTTATGCTCCGTCACTTGTAGCTGCTTCTGCAATCTTCCTGGCCAATTACATAACACTCCCTTCAAAGAGACCATGGAATGCTACCTTGCAGCATTACACACTTTACCAGCTTTCTGATTTGCGTGAATGCGTCAAGGATCTCCATCGCCTATGTTGTGATAACCACAATTCTAGTTTACCAGCTATCAGAGAGAAATACAGTCAGCATAAGTACAAGTATGTAGCCAAGAAGTACTGCCCACCAACAATTCCTACAGAGTACCAAGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000280 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006996 GO:0007049 GO:0007135 GO:0007140 GO:0007275 GO:0007276 GO:0008150 GO:0009555 GO:0009556 GO:0009987 GO:0016043 GO:0019953 GO:0022402 GO:0022412 GO:0022414 GO:0032501 GO:0032502 GO:0032504 GO:0034293 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043934 GO:0044424 GO:0044464 GO:0044703 GO:0048229 GO:0048232 GO:0048236 GO:0048285 GO:0048609 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051321 GO:0051445 GO:0051704 GO:0051726 GO:0061983 GO:0065007 GO:0071840 GO:0140013 GO:1903046 GO:2000241

KEGG Pathways

Metabolic & Signaling

ko04110 ko04152 ko04218 ko04914 ko05161 ko05165 ko05169 ko05203 map04110 map04152 map04218 map04914 map05161 map05165 map05169 map05203

Pfam Domains

Protein Families

Cyclin_C Cyclin_N

Protein Analysis

493

Amino Acids

55.07

Weight (kDa)

7.04

Isoelectric Point (pI)

52.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cyclin_N	PF00134	231 - 358	1.4e-50	Cyclin, N-terminal domain
Cyclin_C	PF02984	361 - 480	8.4e-37	Cyclin, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001536)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G44110
fragaria_vesca	FvH4_1g09410 FvH4_2g27580 FvH4_2g27580 FvH4_2g27590
malus_domestica	MD00G1156900.v1.1 MD15G1344200.v1.1 MD15G1344300.v1.1
prunus_persica	Prupe.1G491700_v2.0.a1 Prupe.1G491800_v2.0.a1 Prupe.1G491800_v2.0.a1 Prupe.1G491800_v2.0.a1
pyrus_communis	pycom116g00040 pycom15g30740 pycom15g30750
rosa_chinensis	RchiOBHm_Chr2g0095961 RchiOBHm_Chr6g0296421 RchiOBHm_Chr6g0296431
rosa_laevigata	RLG00000011694 RLG00000011695 RLG00000016611
rosa_multiflora	Rmu_sc0002497.1_g000006 Rmu_sc0004084.1_g000046 Rmu_sc0004487.1_g000017 Rmu_sc0008096.1_g000016 Rmu_sc0019394.1_g000001 Rmu_sc0033856.1_g000002 Rmu_sc0034769.1_g000001
rosa_roxburghii	Rroxscaffold_2G00145910 Rroxscaffold_7G00171540 Rroxscaffold_7G00171550 Rroxscaffold_7G00178580 Rroxscaffold_7G00178590
rosa_rugosa	Rorug02G0055400 Rorug06G0262300 Rorug06G0262400 Rorug06G0262400 Rorug06G0262400
rosa_samantha	Rh2AG103400 Rh2BG104800 Rh2CG107400 Rh2DG105100 Rh6AG373400 Rh6AG373500 Rh6BG382100 Rh6BG382200 Rh6CG386900 Rh6DG374600
rosa_wichuraiana	Rw2G007870 Rw6G032580 Rw6G032590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	184
Acc36I	ACCTGC	1 cut(s)	259
Acc65I	GGTACC	1 cut(s)	175
AccB1I	GGYRCC	1 cut(s)	175
AccI	GTMKAC	1 cut(s)	5
AciI	CCGC	4 cut(s)	16, 43, 482, 1077
AclWI	GGATC	3 cut(s)	656, 669, 1353
AcoI	YGGCCR	2 cut(s)	99, 1248
AcsI	RAATTY	1 cut(s)	756
AcuI	CTGAAG	1 cut(s)	840
AfaI	GTAC	8 cut(s)	177, 249, 494, 827, 837, 1421, 1442, 1469
AfiI	CCNNNNNNNGG	1 cut(s)	658
AflII	CTTAAG	1 cut(s)	1096
AgsI	TTSAA	8 cut(s)	262, 515, 980, 1015, 1051, 1060, 1067, 1272
AjnI	CCWGG	2 cut(s)	972, 1245
AjuI	GAANNNNNNNTTGG	4 cut(s)	155, 187, 283, 315
AluBI	AGCT	9 cut(s)	168, 362, 372, 670, 1135, 1150, 1229, 1318, 1391
AluI	AGCT	9 cut(s)	168, 362, 372, 670, 1135, 1150, 1229, 1318, 1391
Alw21I	GWGCWC	2 cut(s)	170, 970
Alw26I	GTCTC	2 cut(s)	443, 1270
Alw44I	GTGCAC	1 cut(s)	966
AlwI	GGATC	3 cut(s)	656, 669, 1353
Ama87I	CYCGRG	1 cut(s)	775
AoxI	GGCC	5 cut(s)	48, 99, 731, 1125, 1248
ApaLI	GTGCAC	1 cut(s)	966
ApeKI	GCWGC	5 cut(s)	362, 1115, 1147, 1229, 1297
ApoI	RAATTY	1 cut(s)	756
Asp718I	GGTACC	1 cut(s)	175
AspLEI	GCGC	3 cut(s)	115, 185, 227
AspS9I	GGNCC	1 cut(s)	1125
AsuHPI	GGTGA	1 cut(s)	733
AsuII	TTCGAA	1 cut(s)	161
AsuNHI	GCTAGC	1 cut(s)	221
AvaI	CYCGRG	1 cut(s)	775
BaeGI	GKGCMC	1 cut(s)	970
BalI	TGGCCA	2 cut(s)	101, 1250
BamHI	GGATCC	1 cut(s)	661
BanI	GGYRCC	1 cut(s)	175
BanII	GRGCYC	2 cut(s)	93, 170
Bbv12I	GWGCWC	2 cut(s)	170, 970
BbvI	GCAGC	5 cut(s)	349, 1102, 1159, 1216, 1309
BccI	CCATC	4 cut(s)	419, 620, 1147, 1359
BceAI	ACGGC	1 cut(s)	100
BciT130I	CCWGG	2 cut(s)	974, 1247
BcoDI	GTCTC	2 cut(s)	443, 1270
BfaI	CTAG	3 cut(s)	222, 1190, 1380
BfmI	CTRYAG	2 cut(s)	592, 1461
BfoI	RGCGCY	2 cut(s)	116, 228
BfrI	CTTAAG	1 cut(s)	1096
BfuAI	ACCTGC	1 cut(s)	259
BglII	AGATCT	1 cut(s)	960
BisI	GCNGC	7 cut(s)	44, 363, 1077, 1116, 1148, 1230, 1298
BlpI	GCTNAGC	1 cut(s)	87
BlsI	GCNGC	7 cut(s)	45, 364, 1078, 1117, 1149, 1231, 1299
BmcAI	AGTACT	1 cut(s)	1442
Bme1390I	CCNGG	2 cut(s)	974, 1247
BmeT110I	CYCGRG	1 cut(s)	775
BmgT120I	GGNCC	1 cut(s)	1125
BmiI	GGNNCC	4 cut(s)	177, 663, 890, 1126
BmrFI	CCNGG	2 cut(s)	974, 1247
BmsI	GCATC	2 cut(s)	722, 953
BmtI	GCTAGC	1 cut(s)	225
BpmI	CTGGAG	1 cut(s)	1172
Bpu1102I	GCTNAGC	1 cut(s)	87
Bpu14I	TTCGAA	1 cut(s)	161
BpuEI	CTTGAG	1 cut(s)	1104
BsaBI	GATNNNNATC	1 cut(s)	1350
BsaI	GGTCTC	1 cut(s)	1270
BsaJI	CCNNGG	2 cut(s)	972, 1280
BsaWI	WCCGGW	2 cut(s)	31, 79
BsaXI	ACNNNNNCTCC	2 cut(s)	420, 450
Bsc4I	CCNNNNNNNGG	1 cut(s)	658
Bse1I	ACTGG	2 cut(s)	228, 806
Bse3DI	GCAATG	3 cut(s)	148, 375, 633
Bse8I	GATNNNNATC	1 cut(s)	1350
BseBI	CCWGG	2 cut(s)	974, 1247
BseDI	CCNNGG	2 cut(s)	972, 1280
BseGI	GGATG	3 cut(s)	409, 430, 451
BseJI	GATNNNNATC	1 cut(s)	1350
BseLI	CCNNNNNNNGG	1 cut(s)	658
BseMI	GCAATG	3 cut(s)	148, 375, 633
BseMII	CTCAG	2 cut(s)	78, 708
BseNI	ACTGG	2 cut(s)	228, 806
BseRI	GAGGAG	1 cut(s)	971
BseSI	GKGCMC	1 cut(s)	970
BseXI	GCAGC	5 cut(s)	349, 1102, 1159, 1216, 1309
BseYI	CCCAGC	1 cut(s)	368
BsgI	GTGCAG	1 cut(s)	297
BshFI	GGCC	5 cut(s)	50, 101, 733, 1127, 1250
BshNI	GGYRCC	1 cut(s)	175
BsiHKAI	GWGCWC	2 cut(s)	170, 970
BsiHKCI	CYCGRG	1 cut(s)	775
BsiSI	CCGG	2 cut(s)	32, 80
BslFI	GGGAC	1 cut(s)	374
BslI	CCNNNNNNNGG	1 cut(s)	658
BsmAI	GTCTC	2 cut(s)	443, 1270
BsmFI	GGGAC	1 cut(s)	374
BsmI	GAATGC	2 cut(s)	1291, 1340
BsnI	GGCC	5 cut(s)	50, 101, 733, 1127, 1250
Bso31I	GGTCTC	1 cut(s)	1270
BsoBI	CYCGRG	1 cut(s)	775
Bsp119I	TTCGAA	1 cut(s)	161
Bsp1286I	GDGCHC	3 cut(s)	93, 170, 970
Bsp143I	GATC	5 cut(s)	20, 532, 661, 960, 1345
Bsp1720I	GCTNAGC	1 cut(s)	87
Bsp19I	CCATGG	1 cut(s)	1280
BspACI	CCGC	4 cut(s)	16, 43, 482, 1077
BspANI	GGCC	5 cut(s)	50, 101, 733, 1127, 1250
BspCNI	CTCAG	2 cut(s)	79, 709
BspLI	GGNNCC	4 cut(s)	177, 663, 890, 1126
BspMAI	CTGCAG	1 cut(s)	596
BspMI	ACCTGC	1 cut(s)	259
BspOI	GCTAGC	1 cut(s)	225
BspPI	GGATC	3 cut(s)	656, 669, 1353
BspQI	GCTCTTC	1 cut(s)	158
BspT104I	TTCGAA	1 cut(s)	161
BspT107I	GGYRCC	1 cut(s)	175
BspTI	CTTAAG	1 cut(s)	1096
BspTNI	GGTCTC	1 cut(s)	1270
BsrDI	GCAATG	3 cut(s)	148, 375, 633
BsrI	ACTGG	2 cut(s)	228, 806
BssECI	CCNNGG	2 cut(s)	972, 1280
BssMI	GATC	5 cut(s)	20, 532, 661, 960, 1345
BssT1I	CCWWGG	1 cut(s)	1280
Bst2UI	CCWGG	2 cut(s)	974, 1247
Bst4CI	ACNGT	5 cut(s)	653, 859, 909, 915, 1409
Bst6I	CTCTTC	5 cut(s)	158, 816, 975, 1014, 1191
BstAFI	CTTAAG	1 cut(s)	1096
BstAPI	GCANNNNNTGC	1 cut(s)	683
BstBI	TTCGAA	1 cut(s)	161
BstC8I	GCNNGC	7 cut(s)	48, 111, 223, 711, 782, 786, 1202
BstDEI	CTNAG	2 cut(s)	87, 717
BstDSI	CCRYGG	1 cut(s)	1280
BstF5I	GGATG	3 cut(s)	409, 430, 451
BstH2I	RGCGCY	2 cut(s)	116, 228
BstHHI	GCGC	3 cut(s)	115, 185, 227
BstKTI	GATC	5 cut(s)	23, 535, 664, 963, 1348
BstMAI	GTCTC	2 cut(s)	443, 1270
BstMBI	GATC	5 cut(s)	20, 532, 661, 960, 1345
BstMWI	GCNNNNNNNGC	3 cut(s)	683, 1124, 1235
BstNI	CCWGG	2 cut(s)	974, 1247
BstNSI	RCATGY	2 cut(s)	784, 1204
BstSCI	CCNGG	2 cut(s)	972, 1245
BstSFI	CTRYAG	2 cut(s)	592, 1461
BstSLI	GKGCMC	1 cut(s)	970
BstV1I	GCAGC	5 cut(s)	349, 1102, 1159, 1216, 1309
BstX2I	RGATCY	3 cut(s)	661, 960, 1345
BstYI	RGATCY	3 cut(s)	661, 960, 1345
BsuRI	GGCC	5 cut(s)	50, 101, 733, 1127, 1250
BtgI	CCRYGG	1 cut(s)	1280
BtgZI	GCGATG	1 cut(s)	1337
BtsCI	GGATG	3 cut(s)	409, 430, 451
BveI	ACCTGC	1 cut(s)	259
Cac8I	GCNNGC	7 cut(s)	48, 111, 223, 711, 782, 786, 1202
CfoI	GCGC	3 cut(s)	115, 185, 227
Cfr13I	GGNCC	1 cut(s)	1125
CseI	GACGC	1 cut(s)	1327
Csp6I	GTAC	8 cut(s)	176, 248, 493, 826, 836, 1420, 1441, 1468
CviAII	CATG	8 cut(s)	180, 400, 569, 658, 748, 781, 1201, 1281
CviQI	GTAC	8 cut(s)	176, 248, 493, 826, 836, 1420, 1441, 1468
DdeI	CTNAG	2 cut(s)	87, 717
DpnI	GATC	5 cut(s)	22, 534, 663, 962, 1347
DpnII	GATC	5 cut(s)	20, 532, 661, 960, 1345
EaeI	YGGCCR	2 cut(s)	99, 1248
Eam1104I	CTCTTC	5 cut(s)	158, 816, 975, 1014, 1191
EarI	CTCTTC	5 cut(s)	158, 816, 975, 1014, 1191
Ecl136II	GAGCTC	1 cut(s)	168
Eco130I	CCWWGG	1 cut(s)	1280
Eco147I	AGGCCT	2 cut(s)	50, 733
Eco24I	GRGCYC	2 cut(s)	93, 170
Eco31I	GGTCTC	1 cut(s)	1270
Eco32I	GATATC	2 cut(s)	694, 878
Eco53kI	GAGCTC	1 cut(s)	168
Eco57I	CTGAAG	1 cut(s)	840
Eco88I	CYCGRG	1 cut(s)	775
EcoICRI	GAGCTC	1 cut(s)	168
EcoRII	CCWGG	2 cut(s)	972, 1245
EcoRV	GATATC	2 cut(s)	694, 878
EcoT14I	CCWWGG	1 cut(s)	1280
EcoT38I	GRGCYC	2 cut(s)	93, 170
ErhI	CCWWGG	1 cut(s)	1280
FaeI	CATG	8 cut(s)	183, 403, 572, 661, 751, 784, 1204, 1284
FaqI	GGGAC	1 cut(s)	374
FatI	CATG	8 cut(s)	179, 399, 568, 657, 747, 780, 1200, 1280
FblI	GTMKAC	1 cut(s)	5
Fnu4HI	GCNGC	7 cut(s)	44, 363, 1077, 1116, 1148, 1230, 1298
FokI	GGATG	3 cut(s)	416, 437, 458
FriOI	GRGCYC	2 cut(s)	93, 170
Fsp4HI	GCNGC	7 cut(s)	44, 363, 1077, 1116, 1148, 1230, 1298
FspBI	CTAG	3 cut(s)	222, 1190, 1380
FspI	TGCGCA	1 cut(s)	184
GlaI	GCGC	3 cut(s)	114, 184, 226
GluI	GCNGC	7 cut(s)	44, 363, 1077, 1116, 1148, 1230, 1298
GsaI	CCCAGC	1 cut(s)	372
GsuI	CTGGAG	1 cut(s)	1172
HaeII	RGCGCY	2 cut(s)	116, 228
HaeIII	GGCC	5 cut(s)	50, 101, 733, 1127, 1250
HapII	CCGG	2 cut(s)	32, 80
HgaI	GACGC	1 cut(s)	1327
HhaI	GCGC	3 cut(s)	115, 185, 227
Hin1II	CATG	8 cut(s)	183, 403, 572, 661, 751, 784, 1204, 1284
Hin6I	GCGC	3 cut(s)	113, 183, 225
HinP1I	GCGC	3 cut(s)	113, 183, 225
HincII	GTYRAC	3 cut(s)	6, 459, 799
HindII	GTYRAC	3 cut(s)	6, 459, 799
HinfI	GANTC	7 cut(s)	133, 407, 431, 467, 478, 524, 1037
HpaII	CCGG	2 cut(s)	32, 80
HphI	GGTGA	1 cut(s)	733
Hpy166II	GTNNAC	7 cut(s)	6, 336, 459, 799, 862, 968, 1385
Hpy188I	TCNGA	8 cut(s)	129, 138, 424, 565, 718, 762, 1324, 1397
Hpy188III	TCNNGA	2 cut(s)	70, 1190
Hpy8I	GTNNAC	7 cut(s)	6, 336, 459, 799, 862, 968, 1385
Hpy99I	CGWCG	3 cut(s)	58, 61, 64
HpyAV	CCTTC	4 cut(s)	614, 744, 757, 1278
HpyCH4III	ACNGT	5 cut(s)	653, 859, 909, 915, 1409
HpyF10VI	GCNNNNNNNGC	3 cut(s)	683, 1124, 1235
HpyF3I	CTNAG	2 cut(s)	87, 717
Hsp92II	CATG	8 cut(s)	183, 403, 572, 661, 751, 784, 1204, 1284
HspAI	GCGC	3 cut(s)	113, 183, 225
KpnI	GGTACC	1 cut(s)	179
Kzo9I	GATC	5 cut(s)	20, 532, 661, 960, 1345
LguI	GCTCTTC	1 cut(s)	158
LmnI	GCTCC	4 cut(s)	138, 370, 377, 1219
Lsp1109I	GCAGC	5 cut(s)	349, 1102, 1159, 1216, 1309
LweI	GCATC	2 cut(s)	722, 953
MaeI	CTAG	3 cut(s)	222, 1190, 1380
MaeIII	GTNAC	7 cut(s)	230, 295, 395, 909, 915, 989, 1218
MalI	GATC	5 cut(s)	22, 534, 663, 962, 1347
MboI	GATC	5 cut(s)	20, 532, 661, 960, 1345
MboII	GAAGA	9 cut(s)	175, 368, 736, 833, 992, 1031, 1032, 1178, 1234
MflI	RGATCY	3 cut(s)	661, 960, 1345
MhlI	GDGCHC	3 cut(s)	93, 170, 970
MlsI	TGGCCA	2 cut(s)	101, 1250
MluCI	AATT	5 cut(s)	756, 1051, 1252, 1375, 1455
MluNI	TGGCCA	2 cut(s)	101, 1250
MlyI	GAGTC	1 cut(s)	487
MmeI	TCCRAC	1 cut(s)	597
MnlI	CCTC	8 cut(s)	61, 230, 349, 563, 712, 805, 949, 1015
Mox20I	TGGCCA	2 cut(s)	101, 1250
MscI	TGGCCA	2 cut(s)	101, 1250
MseI	TTAA	4 cut(s)	267, 474, 771, 1097
MslI	CAYNNNNRTG	1 cut(s)	708
Msp20I	TGGCCA	2 cut(s)	101, 1250
MspA1I	CMGCKG	1 cut(s)	1150
MspCI	CTTAAG	1 cut(s)	1096
MspI	CCGG	2 cut(s)	32, 80
MspR9I	CCNGG	2 cut(s)	974, 1247
Mva1269I	GAATGC	2 cut(s)	1291, 1340
MvaI	CCWGG	2 cut(s)	974, 1247
MwoI	GCNNNNNNNGC	3 cut(s)	683, 1124, 1235
NcoI	CCATGG	1 cut(s)	1280
NdeII	GATC	5 cut(s)	20, 532, 661, 960, 1345
NheI	GCTAGC	1 cut(s)	221
NlaIII	CATG	8 cut(s)	183, 403, 572, 661, 751, 784, 1204, 1284
NlaIV	GGNNCC	4 cut(s)	177, 663, 890, 1126
NmuCI	GTSAC	1 cut(s)	1218
NsbI	TGCGCA	1 cut(s)	184
NspI	RCATGY	2 cut(s)	784, 1204
NspV	TTCGAA	1 cut(s)	161
PaeI	GCATGC	2 cut(s)	784, 1204
PceI	AGGCCT	2 cut(s)	50, 733
PciSI	GCTCTTC	1 cut(s)	158
PcsI	WCGNNNNNNNCGW	2 cut(s)	59, 167
PctI	GAATGC	2 cut(s)	1291, 1340
PfeI	GAWTC	6 cut(s)	133, 407, 431, 467, 524, 1037
PflFI	GACNNNGTC	1 cut(s)	454
PkrI	GCNGC	7 cut(s)	45, 364, 1078, 1117, 1149, 1231, 1299
PleI	GAGTC	1 cut(s)	486
PpsI	GAGTC	1 cut(s)	486
Psp124BI	GAGCTC	1 cut(s)	170
Psp6I	CCWGG	2 cut(s)	972, 1245
PspFI	CCCAGC	1 cut(s)	368
PspGI	CCWGG	2 cut(s)	972, 1245
PspN4I	GGNNCC	4 cut(s)	177, 663, 890, 1126
PspPI	GGNCC	1 cut(s)	1125
PstI	CTGCAG	1 cut(s)	596
PsuI	RGATCY	3 cut(s)	661, 960, 1345
PsyI	GACNNNGTC	1 cut(s)	454
PvuII	CAGCTG	1 cut(s)	1150
RsaI	GTAC	8 cut(s)	177, 249, 494, 827, 837, 1421, 1442, 1469
RsaNI	GTAC	8 cut(s)	176, 248, 493, 826, 836, 1420, 1441, 1468
RseI	CAYNNNNRTG	1 cut(s)	708
SacI	GAGCTC	1 cut(s)	170
SalI	GTCGAC	1 cut(s)	4
SapI	GCTCTTC	1 cut(s)	158
SaqAI	TTAA	4 cut(s)	267, 474, 771, 1097
SatI	GCNGC	7 cut(s)	44, 363, 1077, 1116, 1148, 1230, 1298
Sau3AI	GATC	5 cut(s)	20, 532, 661, 960, 1345
Sau96I	GGNCC	1 cut(s)	1125
ScaI	AGTACT	1 cut(s)	1442
SchI	GAGTC	1 cut(s)	487
ScrFI	CCNGG	2 cut(s)	974, 1247
SduI	GDGCHC	3 cut(s)	93, 170, 970
SfaNI	GCATC	2 cut(s)	722, 953
SfcI	CTRYAG	2 cut(s)	592, 1461
SfuI	TTCGAA	1 cut(s)	161
SmiMI	CAYNNNNRTG	1 cut(s)	708
SmlI	CTYRAG	2 cut(s)	1096, 1119
SmoI	CTYRAG	2 cut(s)	1096, 1119
SphI	GCATGC	2 cut(s)	784, 1204
Sse9I	AATT	5 cut(s)	756, 1051, 1252, 1375, 1455
SseBI	AGGCCT	2 cut(s)	50, 733
SsiI	CCGC	4 cut(s)	16, 43, 482, 1077
SspMI	CTAG	3 cut(s)	222, 1190, 1380
SstI	GAGCTC	1 cut(s)	170
StuI	AGGCCT	2 cut(s)	50, 733
StyD4I	CCNGG	2 cut(s)	972, 1245
StyI	CCWWGG	1 cut(s)	1280
TaaI	ACNGT	5 cut(s)	653, 859, 909, 915, 1409
TaqI	TCGA	4 cut(s)	5, 62, 161, 535
TaqII	GACCGA	1 cut(s)	888
TasI	AATT	5 cut(s)	756, 1051, 1252, 1375, 1455
TatI	WGTACW	4 cut(s)	492, 825, 1419, 1440
TauI	GCSGC	2 cut(s)	46, 1079
TfiI	GAWTC	6 cut(s)	133, 407, 431, 467, 524, 1037
Tru1I	TTAA	4 cut(s)	267, 474, 771, 1097
Tru9I	TTAA	4 cut(s)	267, 474, 771, 1097
TseFI	GTSAC	1 cut(s)	1218
TseI	GCWGC	5 cut(s)	362, 1115, 1147, 1229, 1297
Tsp45I	GTSAC	1 cut(s)	1218
TspDTI	ATGAA	4 cut(s)	333, 369, 646, 911
TspGWI	ACGGA	1 cut(s)	1206
Tth111I	GACNNNGTC	1 cut(s)	454
Vha464I	CTTAAG	1 cut(s)	1096
VneI	GTGCAC	1 cut(s)	966
XapI	RAATTY	1 cut(s)	756
XbaI	TCTAGA	1 cut(s)	1189
XceI	RCATGY	2 cut(s)	784, 1204
XcmI	CCANNNNNNNNNTGG	1 cut(s)	745
XmiI	GTMKAC	1 cut(s)	5
XspI	CTAG	3 cut(s)	222, 1190, 1380
ZrmI	AGTACT	1 cut(s)	1442

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.