Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0001536

Physical Location & Seq

Genomic Coordinates Reverse (-)

4297683 .. 4300491

Gene Structure 2809 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0055400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1515 bp

ATGGAGAACAACGAATCTGTGCCAAATCGCGTTGTGGGCCCTGGCGAGGATGACACATGTGCTATATGCTCAAAGCTGTTTCGATTCAGGGACATCGTATCTGTGGTAGGAAAGGAGCAGCCGCACATATTTCATTTTGATTGCTACGGCTATGGTGTGGAAGTGACGCAATTGCTTGATGACGATGACCATGGAAGAACGGGGACATCAGCCCGTTGCCCTCTCTGCAGAGAAAAGATCAATTATGGAGACTATCTTACTTATTTACATCTCGAGGAGGGTTTAACACGGCTCCGCGTCGACCAGTATCCACCTCCACCACCACCACCGCGGCGTCTCCCACCAGTGCCTGCCGGAGATCAGCCTCCACCACCTCCACCTCCACCTCCGCCCCCGCCGCCGCCTGATGGAGACGACGATGCTGAGATGTTTGAAGATGCCTTTACAGGGCCAGCCCGGGGCGACAACCCAACAACATCTTCCCACACGTTGGACGTAAGCGAGGGATTTGAATCTCCTATGAGCCCTACTTGGCCATCAACAACAACAAGTCACATCAAATTCCTGAGGCGGGACTCATCAAAATCTGCCCAACAGCTTGCGTCTCAGTATGATACTTTGCATGATACTGATCTGTCATCTTTCATCAACAAGATTCATATCTGGCTCAATCAATTGAGGTATGTTGCAGCAGGCAGTAGACCCCTTTTTAAAACATACAATGGCACCTATAAAAATACTACAGTACCAGCCCAGAAGAACATCCAGGAAGCTCTCAACTGTGCCGGGCTTGGGTCACAGATCAAAGCCACTGTGCTCTTCAATGCTGTCATCTACTTCTCCCCTGCCTCAGACCCAGTTCCATCCACGGGAGACTTCCAGCTGGAAATTAAAGATAATGCGATTGAGATAATCCAATACCCATACACCAGTGATGCTCCATTCACTGTCAACATCTACCCTTTCCTCTGCCTGTATGGAAGTGCCTATCTCCCTTTTGAATTTGCTTTCTTTGAAGCAAACATTGACACCGTTGATCGGTCTTTAACCAAAGCTGGGTTCCCTGAAATGAATATCATAGTTGGAGAGGCGGGTTGGTCAACTGATGGGGTTGTAAATGCCAATATCCCAAGTGCCGAAAGGTTTCATCAGGGAATGCTTGAACATGCCTTGAGCGGAAATGGAACTCCAGCTAGGGAAGGCATGATTGATGTTTACCTTTACAGCCACATTGATGAAAATGCTAAAAGCATTGCTCCCGGCTGCTTTGAGAGGGACTGGGGCCTGTTCGAGTTCGATGGGAAGCTGAAATACGAGTTGGATTTGTCGGGTTCAGTGCAGAATAAGGGAATTGTAGCCGTGGAAGGGATGTTCAAAAGGTGGTGTGTGCTGAATCCAGATGCTAAAGATTTGTATGGCTTGCCAAGTAGCGTTGACTATGCTTGTGGTCTTTCAGATTGTACTGCATTGGGTTATGGTTCTTCTTGCAATAACCATAGTGTTTCTGTGGCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000280 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006996 GO:0007049 GO:0007135 GO:0007140 GO:0007275 GO:0007276 GO:0008150 GO:0009555 GO:0009556 GO:0009987 GO:0016043 GO:0019953 GO:0022402 GO:0022412 GO:0022414 GO:0032501 GO:0032502 GO:0032504 GO:0034293 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043934 GO:0044424 GO:0044464 GO:0044703 GO:0048229 GO:0048232 GO:0048236 GO:0048285 GO:0048609 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051321 GO:0051445 GO:0051704 GO:0051726 GO:0061983 GO:0065007 GO:0071840 GO:0140013 GO:1903046 GO:2000241

KEGG Pathways

Metabolic & Signaling

ko04110 ko04152 ko04218 ko04914 ko05161 ko05165 ko05169 ko05203 map04110 map04152 map04218 map04914 map05161 map05165 map05169 map05203

Pfam Domains

Protein Families

Cyclin_C Cyclin_N

Protein Analysis

504

Amino Acids

55.44

Weight (kDa)

4.74

Isoelectric Point (pI)

47.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_17	PF00332	225 - 441	4.1e-26	Glycosyl hydrolases family 17

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001536)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G44110
fragaria_vesca	FvH4_1g09410 FvH4_2g27580 FvH4_2g27580 FvH4_2g27590
malus_domestica	MD00G1156900.v1.1 MD15G1344200.v1.1 MD15G1344300.v1.1
prunus_persica	Prupe.1G491700_v2.0.a1 Prupe.1G491800_v2.0.a1 Prupe.1G491800_v2.0.a1 Prupe.1G491800_v2.0.a1
pyrus_communis	pycom116g00040 pycom15g30740 pycom15g30750
rosa_chinensis	RchiOBHm_Chr2g0095961 RchiOBHm_Chr6g0296421 RchiOBHm_Chr6g0296431
rosa_laevigata	RLG00000011694 RLG00000011695 RLG00000016611
rosa_multiflora	Rmu_sc0002497.1_g000006 Rmu_sc0004084.1_g000046 Rmu_sc0004487.1_g000017 Rmu_sc0008096.1_g000016 Rmu_sc0019394.1_g000001 Rmu_sc0033856.1_g000002 Rmu_sc0034769.1_g000001
rosa_roxburghii	Rroxscaffold_2G00145910 Rroxscaffold_7G00171540 Rroxscaffold_7G00171550 Rroxscaffold_7G00178580 Rroxscaffold_7G00178590
rosa_rugosa	Rorug02G0055400 Rorug06G0262300 Rorug06G0262400 Rorug06G0262400 Rorug06G0262400
rosa_samantha	Rh2AG103400 Rh2BG104800 Rh2CG107400 Rh2DG105100 Rh6AG373400 Rh6AG373500 Rh6BG382100 Rh6BG382200 Rh6CG386900 Rh6DG374600
rosa_wichuraiana	Rw2G007870 Rw6G032580 Rw6G032590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	725
AccB7I	CCANNNNNTGG	1 cut(s)	490
AccBSI	CCGCTC	1 cut(s)	1176
AccI	GTMKAC	2 cut(s)	300, 700
AccII	CGCG	3 cut(s)	30, 297, 331
AcoI	YGGCCR	1 cut(s)	533
AcsI	RAATTY	2 cut(s)	560, 1001
AcyI	GRCGYC	1 cut(s)	334
AfaI	GTAC	2 cut(s)	747, 1462
AflIII	ACRYGT	2 cut(s)	56, 486
AgsI	TTSAA	7 cut(s)	434, 512, 823, 1001, 1016, 1163, 1375
AjnI	CCWGG	2 cut(s)	40, 765
AjuI	GAANNNNNNNTTGG	6 cut(s)	463, 495, 1043, 1075, 1301, 1333
AloI	GAACNNNNNNTCC	2 cut(s)	1355, 1387
AluBI	AGCT	7 cut(s)	76, 598, 773, 883, 1055, 1193, 1306
AluI	AGCT	7 cut(s)	76, 598, 773, 883, 1055, 1193, 1306
Alw21I	GWGCWC	1 cut(s)	819
Alw26I	GTCTC	5 cut(s)	243, 341, 405, 609, 867
AlwNI	CAGNNNCTG	1 cut(s)	350
Ama87I	CYCGRG	2 cut(s)	272, 456
AoxI	GGCC	4 cut(s)	37, 449, 533, 1282
ApaI	GGGCCC	1 cut(s)	41
ApeKI	GCWGC	3 cut(s)	118, 689, 1263
ApoI	RAATTY	2 cut(s)	560, 1001
Asp700I	GAANNNNTTC	1 cut(s)	1143
AspS9I	GGNCC	4 cut(s)	37, 38, 449, 1282
AsuC2I	CCSGG	4 cut(s)	457, 458, 787, 1260
AvaI	CYCGRG	2 cut(s)	272, 456
AxyI	CCTNAGG	1 cut(s)	566
BaeGI	GKGCMC	1 cut(s)	41
BaeI	ACNNNNGTAYC	2 cut(s)	729, 762
BalI	TGGCCA	1 cut(s)	535
BanI	GGYRCC	1 cut(s)	725
BanII	GRGCYC	2 cut(s)	41, 527
BarI	GAAGNNNNNNTAC	2 cut(s)	1295, 1327
Bbv12I	GWGCWC	1 cut(s)	819
BbvI	GCAGC	3 cut(s)	130, 701, 1250
BccI	CCATC	5 cut(s)	401, 544, 871, 1100, 1292
BceAI	ACGGC	3 cut(s)	163, 305, 1343
BciT130I	CCWGG	2 cut(s)	42, 767
BciVI	GTATCC	1 cut(s)	318
BcnI	CCSGG	4 cut(s)	457, 458, 787, 1260
BcoDI	GTCTC	5 cut(s)	243, 341, 405, 609, 867
BfaI	CTAG	1 cut(s)	1194
BfmI	CTRYAG	2 cut(s)	226, 741
BfuI	GTATCC	1 cut(s)	318
BisI	GCNGC	7 cut(s)	119, 122, 332, 398, 401, 690, 1264
BlsI	GCNGC	7 cut(s)	120, 123, 333, 399, 402, 691, 1265
Bme1390I	CCNGG	6 cut(s)	42, 457, 458, 767, 787, 1260
BmeT110I	CYCGRG	2 cut(s)	272, 456
BmgT120I	GGNCC	4 cut(s)	37, 38, 449, 1282
BmiI	GGNNCC	5 cut(s)	39, 293, 727, 1061, 1283
BmrFI	CCNGG	6 cut(s)	42, 457, 458, 767, 787, 1260
BmrI	ACTGGG	2 cut(s)	851, 1288
BmsI	GCATC	4 cut(s)	409, 427, 925, 1390
BmuI	ACTGGG	2 cut(s)	851, 1288
BpmI	CTGGAG	1 cut(s)	1173
BpuEI	CTTGAG	1 cut(s)	1192
BpuMI	CCSGG	4 cut(s)	457, 458, 787, 1260
BsaBI	GATNNNNATC	3 cut(s)	511, 630, 659
BsaHI	GRCGYC	1 cut(s)	334
BsaJI	CCNNGG	7 cut(s)	40, 190, 329, 456, 457, 867, 1359
Bse1I	ACTGG	5 cut(s)	304, 344, 857, 930, 1283
Bse21I	CCTNAGG	1 cut(s)	566
Bse3DI	GCAATG	1 cut(s)	1251
Bse8I	GATNNNNATC	3 cut(s)	511, 630, 659
BseBI	CCWGG	2 cut(s)	42, 767
BseDI	CCNNGG	7 cut(s)	40, 190, 329, 456, 457, 867, 1359
BseGI	GGATG	4 cut(s)	55, 762, 863, 1374
BseJI	GATNNNNATC	3 cut(s)	511, 630, 659
BseMI	GCAATG	1 cut(s)	1251
BseMII	CTCAG	4 cut(s)	414, 557, 620, 864
BseNI	ACTGG	5 cut(s)	304, 344, 857, 930, 1283
BseRI	GAGGAG	1 cut(s)	290
BseSI	GKGCMC	1 cut(s)	41
BseXI	GCAGC	3 cut(s)	130, 701, 1250
BseYI	CCCAGC	1 cut(s)	1055
BsgI	GTGCAG	1 cut(s)	1358
Bsh1236I	CGCG	3 cut(s)	30, 297, 331
BshFI	GGCC	4 cut(s)	39, 451, 535, 1284
BshNI	GGYRCC	1 cut(s)	725
BsiHKAI	GWGCWC	1 cut(s)	819
BsiHKCI	CYCGRG	2 cut(s)	272, 456
BsiSI	CCGG	4 cut(s)	354, 457, 786, 1260
BslFI	GGGAC	4 cut(s)	104, 217, 587, 1289
BsmAI	GTCTC	5 cut(s)	243, 341, 405, 609, 867
BsmBI	CGTCTC	3 cut(s)	341, 405, 609
BsmFI	GGGAC	4 cut(s)	104, 217, 587, 1289
BsmI	GAATGC	1 cut(s)	1161
BsnI	GGCC	4 cut(s)	39, 451, 535, 1284
BsoBI	CYCGRG	2 cut(s)	272, 456
Bsp120I	GGGCCC	1 cut(s)	37
Bsp1286I	GDGCHC	3 cut(s)	41, 527, 819
Bsp143I	GATC	5 cut(s)	237, 358, 631, 801, 1036
Bsp19I	CCATGG	1 cut(s)	190
BspANI	GGCC	4 cut(s)	39, 451, 535, 1284
BspCNI	CTCAG	4 cut(s)	415, 558, 619, 863
BspFNI	CGCG	3 cut(s)	30, 297, 331
BspLI	GGNNCC	5 cut(s)	39, 293, 727, 1061, 1283
BspMAI	CTGCAG	1 cut(s)	230
BspQI	GCTCTTC	1 cut(s)	824
BspT107I	GGYRCC	1 cut(s)	725
BsrBI	CCGCTC	1 cut(s)	1176
BsrDI	GCAATG	1 cut(s)	1251
BsrI	ACTGG	5 cut(s)	304, 344, 857, 930, 1283
BssECI	CCNNGG	7 cut(s)	40, 190, 329, 456, 457, 867, 1359
BssMI	GATC	5 cut(s)	237, 358, 631, 801, 1036
BssNI	GRCGYC	1 cut(s)	334
BssT1I	CCWWGG	1 cut(s)	190
Bst2UI	CCWGG	2 cut(s)	42, 767
Bst4CI	ACNGT	5 cut(s)	745, 782, 814, 949, 1033
Bst6I	CTCTTC	1 cut(s)	824
BstACI	GRCGYC	1 cut(s)	334
BstC8I	GCNNGC	5 cut(s)	351, 453, 600, 694, 1421
BstDEI	CTNAG	4 cut(s)	423, 566, 606, 850
BstDSI	CCRYGG	4 cut(s)	190, 329, 867, 1359
BstF5I	GGATG	4 cut(s)	55, 762, 863, 1374
BstFNI	CGCG	3 cut(s)	30, 297, 331
BstKTI	GATC	5 cut(s)	240, 361, 634, 804, 1039
BstMAI	GTCTC	5 cut(s)	243, 341, 405, 609, 867
BstMBI	GATC	5 cut(s)	237, 358, 631, 801, 1036
BstMWI	GCNNNNNNNGC	3 cut(s)	36, 225, 397
BstNI	CCWGG	2 cut(s)	42, 767
BstNSI	RCATGY	2 cut(s)	60, 1169
BstSCI	CCNGG	6 cut(s)	40, 455, 456, 765, 785, 1258
BstSFI	CTRYAG	2 cut(s)	226, 741
BstSLI	GKGCMC	1 cut(s)	41
BstUI	CGCG	3 cut(s)	30, 297, 331
BstV1I	GCAGC	3 cut(s)	130, 701, 1250
Bsu36I	CCTNAGG	1 cut(s)	566
BsuI	GTATCC	1 cut(s)	318
BsuRI	GGCC	4 cut(s)	39, 451, 535, 1284
BtgI	CCRYGG	4 cut(s)	190, 329, 867, 1359
BtsCI	GGATG	4 cut(s)	55, 762, 863, 1374
BtsIMutI	CAGTG	5 cut(s)	351, 810, 937, 945, 1341
Cac8I	GCNNGC	5 cut(s)	351, 453, 600, 694, 1421
CaiI	CAGNNNCTG	1 cut(s)	350
Cfr13I	GGNCC	4 cut(s)	37, 38, 449, 1282
Cfr42I	CCGCGG	1 cut(s)	332
Cfr9I	CCCGGG	1 cut(s)	456
CseI	GACGC	4 cut(s)	175, 286, 323, 591
Csp6I	GTAC	2 cut(s)	746, 1461
CviAII	CATG	5 cut(s)	57, 191, 623, 1166, 1204
CviQI	GTAC	2 cut(s)	746, 1461
DdeI	CTNAG	4 cut(s)	423, 566, 606, 850
DpnI	GATC	5 cut(s)	239, 360, 633, 803, 1038
DpnII	GATC	5 cut(s)	237, 358, 631, 801, 1036
DraI	TTTAAA	1 cut(s)	712
EaeI	YGGCCR	1 cut(s)	533
Eam1104I	CTCTTC	1 cut(s)	824
EarI	CTCTTC	1 cut(s)	824
EciI	GGCGGA	1 cut(s)	378
Eco130I	CCWWGG	1 cut(s)	190
Eco24I	GRGCYC	2 cut(s)	41, 527
Eco81I	CCTNAGG	1 cut(s)	566
Eco88I	CYCGRG	2 cut(s)	272, 456
EcoO109I	RGGNCCY	2 cut(s)	38, 1282
EcoRII	CCWGG	2 cut(s)	40, 765
EcoT14I	CCWWGG	1 cut(s)	190
EcoT38I	GRGCYC	2 cut(s)	41, 527
ErhI	CCWWGG	1 cut(s)	190
Esp3I	CGTCTC	3 cut(s)	341, 405, 609
FaeI	CATG	5 cut(s)	60, 194, 626, 1169, 1207
FaqI	GGGAC	4 cut(s)	104, 217, 587, 1289
FatI	CATG	5 cut(s)	56, 190, 622, 1165, 1203
FauI	CCCGC	3 cut(s)	402, 564, 1084
FblI	GTMKAC	2 cut(s)	300, 700
Fnu4HI	GCNGC	7 cut(s)	119, 122, 332, 398, 401, 690, 1264
FokI	GGATG	4 cut(s)	62, 749, 850, 1381
FriOI	GRGCYC	2 cut(s)	41, 527
Fsp4HI	GCNGC	7 cut(s)	119, 122, 332, 398, 401, 690, 1264
FspBI	CTAG	1 cut(s)	1194
GluI	GCNGC	7 cut(s)	119, 122, 332, 398, 401, 690, 1264
GsaI	CCCAGC	1 cut(s)	1059
GsuI	CTGGAG	1 cut(s)	1173
HaeIII	GGCC	4 cut(s)	39, 451, 535, 1284
HapII	CCGG	4 cut(s)	354, 457, 786, 1260
HgaI	GACGC	4 cut(s)	175, 286, 323, 591
Hin1I	GRCGYC	1 cut(s)	334
Hin1II	CATG	5 cut(s)	60, 194, 626, 1169, 1207
HincII	GTYRAC	4 cut(s)	301, 952, 1101, 1435
HindII	GTYRAC	4 cut(s)	301, 952, 1101, 1435
HinfI	GANTC	6 cut(s)	14, 84, 512, 575, 655, 1393
HpaII	CCGG	4 cut(s)	354, 457, 786, 1260
Hpy166II	GTNNAC	6 cut(s)	301, 701, 952, 1101, 1216, 1435
Hpy188I	TCNGA	2 cut(s)	853, 1456
Hpy188III	TCNNGA	3 cut(s)	272, 565, 1397
Hpy8I	GTNNAC	6 cut(s)	301, 701, 952, 1101, 1216, 1435
Hpy99I	CGWCG	2 cut(s)	302, 419
HpyAV	CCTTC	2 cut(s)	1193, 1358
HpyCH4III	ACNGT	5 cut(s)	745, 782, 814, 949, 1033
HpyCH4IV	ACGT	2 cut(s)	488, 495
HpyCH4V	TGCA	6 cut(s)	228, 622, 689, 1339, 1466, 1488
HpyF10VI	GCNNNNNNNGC	3 cut(s)	36, 225, 397
HpyF3I	CTNAG	4 cut(s)	423, 566, 606, 850
HpySE526I	ACGT	2 cut(s)	488, 495
Hsp92I	GRCGYC	1 cut(s)	334
Hsp92II	CATG	5 cut(s)	60, 194, 626, 1169, 1207
KspI	CCGCGG	1 cut(s)	332
Kzo9I	GATC	5 cut(s)	237, 358, 631, 801, 1036
LguI	GCTCTTC	1 cut(s)	824
LmnI	GCTCC	4 cut(s)	115, 297, 943, 1261
Lsp1109I	GCAGC	3 cut(s)	130, 701, 1250
LweI	GCATC	4 cut(s)	409, 427, 925, 1390
MaeI	CTAG	1 cut(s)	1194
MaeII	ACGT	2 cut(s)	488, 495
MaeIII	GTNAC	3 cut(s)	163, 551, 795
MalI	GATC	5 cut(s)	239, 360, 633, 803, 1038
MbiI	CCGCTC	1 cut(s)	1176
MboI	GATC	5 cut(s)	237, 358, 631, 801, 1036
MboII	GAAGA	6 cut(s)	207, 446, 471, 769, 811, 1473
MfeI	CAATTG	2 cut(s)	170, 674
MhlI	GDGCHC	3 cut(s)	41, 527, 819
MlsI	TGGCCA	1 cut(s)	535
MluCI	AATT	7 cut(s)	170, 241, 560, 674, 888, 1001, 1350
MluNI	TGGCCA	1 cut(s)	535
MlyI	GAGTC	1 cut(s)	569
MmeI	TCCRAC	3 cut(s)	471, 1063, 1299
Mox20I	TGGCCA	1 cut(s)	535
MroXI	GAANNNNTTC	1 cut(s)	1143
MscI	TGGCCA	1 cut(s)	535
MseI	TTAA	4 cut(s)	284, 711, 891, 1046
MslI	CAYNNNNRTG	1 cut(s)	1233
Msp20I	TGGCCA	1 cut(s)	535
MspA1I	CMGCKG	2 cut(s)	331, 883
MspI	CCGG	4 cut(s)	354, 457, 786, 1260
MspR9I	CCNGG	6 cut(s)	42, 457, 458, 767, 787, 1260
MunI	CAATTG	2 cut(s)	170, 674
Mva1269I	GAATGC	1 cut(s)	1161
MvaI	CCWGG	2 cut(s)	42, 767
MvnI	CGCG	3 cut(s)	30, 297, 331
MwoI	GCNNNNNNNGC	3 cut(s)	36, 225, 397
NciI	CCSGG	4 cut(s)	457, 458, 787, 1260
NcoI	CCATGG	1 cut(s)	190
NdeII	GATC	5 cut(s)	237, 358, 631, 801, 1036
NlaIII	CATG	5 cut(s)	60, 194, 626, 1169, 1207
NlaIV	GGNNCC	5 cut(s)	39, 293, 727, 1061, 1283
NmuCI	GTSAC	3 cut(s)	163, 551, 795
NspI	RCATGY	2 cut(s)	60, 1169
PaeR7I	CTCGAG	1 cut(s)	272
PciI	ACATGT	1 cut(s)	56
PciSI	GCTCTTC	1 cut(s)	824
PctI	GAATGC	1 cut(s)	1161
PdmI	GAANNNNTTC	1 cut(s)	1143
PfeI	GAWTC	5 cut(s)	14, 84, 512, 655, 1393
PflMI	CCANNNNNTGG	1 cut(s)	490
PfoI	TCCNGGA	1 cut(s)	765
PkrI	GCNGC	7 cut(s)	120, 123, 333, 399, 402, 691, 1265
PleI	GAGTC	1 cut(s)	569
PpsI	GAGTC	1 cut(s)	569
PscI	ACATGT	1 cut(s)	56
Psp6I	CCWGG	2 cut(s)	40, 765
PspFI	CCCAGC	1 cut(s)	1055
PspGI	CCWGG	2 cut(s)	40, 765
PspN4I	GGNNCC	5 cut(s)	39, 293, 727, 1061, 1283
PspOMI	GGGCCC	1 cut(s)	37
PspPI	GGNCC	4 cut(s)	37, 38, 449, 1282
PstI	CTGCAG	1 cut(s)	230
PstNI	CAGNNNCTG	1 cut(s)	350
PvuII	CAGCTG	1 cut(s)	883
RsaI	GTAC	2 cut(s)	747, 1462
RsaNI	GTAC	2 cut(s)	746, 1461
RseI	CAYNNNNRTG	1 cut(s)	1233
SacII	CCGCGG	1 cut(s)	332
SalI	GTCGAC	1 cut(s)	299
SapI	GCTCTTC	1 cut(s)	824
SaqAI	TTAA	4 cut(s)	284, 711, 891, 1046
SatI	GCNGC	7 cut(s)	119, 122, 332, 398, 401, 690, 1264
Sau3AI	GATC	5 cut(s)	237, 358, 631, 801, 1036
Sau96I	GGNCC	4 cut(s)	37, 38, 449, 1282
SchI	GAGTC	1 cut(s)	569
ScrFI	CCNGG	6 cut(s)	42, 457, 458, 767, 787, 1260
SduI	GDGCHC	3 cut(s)	41, 527, 819
SfaNI	GCATC	4 cut(s)	409, 427, 925, 1390
SfcI	CTRYAG	2 cut(s)	226, 741
Sfr274I	CTCGAG	1 cut(s)	272
Sfr303I	CCGCGG	1 cut(s)	332
SgrBI	CCGCGG	1 cut(s)	332
SlaI	CTCGAG	1 cut(s)	272
SmaI	CCCGGG	1 cut(s)	458
SmiMI	CAYNNNNRTG	1 cut(s)	1233
SmlI	CTYRAG	2 cut(s)	272, 1171
SmoI	CTYRAG	2 cut(s)	272, 1171
Sse9I	AATT	7 cut(s)	170, 241, 560, 674, 888, 1001, 1350
SspMI	CTAG	1 cut(s)	1194
StyD4I	CCNGG	6 cut(s)	40, 455, 456, 765, 785, 1258
StyI	CCWWGG	1 cut(s)	190
TaaI	ACNGT	5 cut(s)	745, 782, 814, 949, 1033
TaiI	ACGT	2 cut(s)	491, 498
TaqI	TCGA	5 cut(s)	82, 273, 300, 1290, 1296
TaqII	GACCGA	1 cut(s)	1029
TasI	AATT	7 cut(s)	170, 241, 560, 674, 888, 1001, 1350
TatI	WGTACW	1 cut(s)	1460
TauI	GCSGC	4 cut(s)	124, 334, 400, 403
TfiI	GAWTC	5 cut(s)	14, 84, 512, 655, 1393
Tru1I	TTAA	4 cut(s)	284, 711, 891, 1046
Tru9I	TTAA	4 cut(s)	284, 711, 891, 1046
TscAI	CASTG	5 cut(s)	351, 817, 937, 952, 1341
TseFI	GTSAC	3 cut(s)	163, 551, 795
TseI	GCWGC	3 cut(s)	118, 689, 1263
Tsp45I	GTSAC	3 cut(s)	163, 551, 795
TspDTI	ATGAA	6 cut(s)	122, 634, 647, 1085, 1136, 1251
TspMI	CCCGGG	1 cut(s)	456
TspRI	CASTG	5 cut(s)	351, 817, 937, 952, 1341
Van91I	CCANNNNNTGG	1 cut(s)	490
XapI	RAATTY	2 cut(s)	560, 1001
XceI	RCATGY	2 cut(s)	60, 1169
XhoI	CTCGAG	1 cut(s)	272
XmaI	CCCGGG	1 cut(s)	456
XmiI	GTMKAC	2 cut(s)	300, 700
XmnI	GAANNNNTTC	1 cut(s)	1143
XspI	CTAG	1 cut(s)	1194

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.