UDP-glucose 6-dehydrogenase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g02200 FvH4_3g02390 |
| rosa_chinensis | RchiOBHm_Chr5g0001321 RchiOBHm_Chr5g0001331 RchiOBHm_Chr5g0003221 RchiOBHm_Chr5g0003231 |
| rosa_laevigata | RLG00000021396 RLG00000021401 RLG00000030920 RLG00000030921 |
| rosa_multiflora | Rmu_sc0001706.1_g000006 Rmu_sc0001817.1_g000008 Rmu_sc0003749.1_g000021 Rmu_sc0010917.1_g000019 |
| rosa_roxburghii | Rroxscaffold_1G00075000 |
| rosa_rugosa | Rorug02G0582900 Rorug02G0583000 Rorug04G0389800 Rorug04G0389900 Rorug04G0401400 Rorug04G0405100 |
| rosa_samantha | Rh5BG012900 Rh5BG027800 Rh5CG010900 Rh5CG011000 Rh5DG010400 Rh5DG010500 Rh5DG031500 |
| rosa_wichuraiana | Rw0G023560 Rw5G000990 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 328 |
| AatII | GACGTC | 1 cut(s) | 60 |
| Acc36I | ACCTGC | 1 cut(s) | 328 |
| AciI | CCGC | 3 cut(s) | 5, 15, 329 |
| AclI | AACGTT | 1 cut(s) | 73 |
| AclWI | GGATC | 2 cut(s) | 371, 538 |
| AcsI | RAATTY | 3 cut(s) | 172, 313, 577 |
| AcyI | GRCGYC | 3 cut(s) | 57, 207, 233 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 224 |
| AgsI | TTSAA | 2 cut(s) | 116, 577 |
| AjnI | CCWGG | 1 cut(s) | 106 |
| AluBI | AGCT | 2 cut(s) | 524, 625 |
| AluI | AGCT | 2 cut(s) | 524, 625 |
| AlwI | GGATC | 2 cut(s) | 371, 538 |
| ApeKI | GCWGC | 2 cut(s) | 17, 590 |
| ApoI | RAATTY | 3 cut(s) | 172, 313, 577 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 80, 112 |
| AspLEI | GCGC | 1 cut(s) | 475 |
| AsuHPI | GGTGA | 3 cut(s) | 309, 397, 553 |
| BauI | CACGAG | 1 cut(s) | 65 |
| BbvI | GCAGC | 2 cut(s) | 29, 577 |
| BceAI | ACGGC | 2 cut(s) | 578, 652 |
| BciT130I | CCWGG | 1 cut(s) | 108 |
| BciVI | GTATCC | 1 cut(s) | 490 |
| BclI | TGATCA | 1 cut(s) | 160 |
| BfmI | CTRYAG | 1 cut(s) | 267 |
| BfuAI | ACCTGC | 1 cut(s) | 328 |
| BfuI | GTATCC | 1 cut(s) | 490 |
| BisI | GCNGC | 3 cut(s) | 15, 18, 591 |
| BlsI | GCNGC | 3 cut(s) | 16, 19, 592 |
| Bme1390I | CCNGG | 1 cut(s) | 108 |
| BmrFI | CCNGG | 1 cut(s) | 108 |
| BpuEI | CTTGAG | 1 cut(s) | 12 |
| BsaBI | GATNNNNATC | 1 cut(s) | 200 |
| BsaHI | GRCGYC | 3 cut(s) | 57, 207, 233 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 224 |
| Bse8I | GATNNNNATC | 1 cut(s) | 200 |
| BseBI | CCWGG | 1 cut(s) | 108 |
| BseJI | GATNNNNATC | 1 cut(s) | 200 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 224 |
| BseXI | GCAGC | 2 cut(s) | 29, 577 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 224 |
| BsmI | GAATGC | 1 cut(s) | 400 |
| Bsp143I | GATC | 6 cut(s) | 61, 160, 304, 376, 399, 543 |
| BspACI | CCGC | 3 cut(s) | 5, 15, 329 |
| BspMI | ACCTGC | 1 cut(s) | 328 |
| BspPI | GGATC | 2 cut(s) | 371, 538 |
| BssMI | GATC | 6 cut(s) | 61, 160, 304, 376, 399, 543 |
| BssNI | GRCGYC | 3 cut(s) | 57, 207, 233 |
| BssSI | CACGAG | 1 cut(s) | 65 |
| Bst2BI | CACGAG | 1 cut(s) | 65 |
| Bst2UI | CCWGG | 1 cut(s) | 108 |
| Bst4CI | ACNGT | 1 cut(s) | 37 |
| Bst6I | CTCTTC | 1 cut(s) | 348 |
| BstACI | GRCGYC | 3 cut(s) | 57, 207, 233 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 526 |
| BstC8I | GCNNGC | 3 cut(s) | 477, 522, 568 |
| BstHHI | GCGC | 1 cut(s) | 475 |
| BstKTI | GATC | 6 cut(s) | 64, 163, 307, 379, 402, 546 |
| BstMBI | GATC | 6 cut(s) | 61, 160, 304, 376, 399, 543 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 11, 526 |
| BstNI | CCWGG | 1 cut(s) | 108 |
| BstNSI | RCATGY | 1 cut(s) | 479 |
| BstSCI | CCNGG | 1 cut(s) | 106 |
| BstSFI | CTRYAG | 1 cut(s) | 267 |
| BstV1I | GCAGC | 2 cut(s) | 29, 577 |
| BsuI | GTATCC | 1 cut(s) | 490 |
| BveI | ACCTGC | 1 cut(s) | 328 |
| Cac8I | GCNNGC | 3 cut(s) | 477, 522, 568 |
| CfoI | GCGC | 1 cut(s) | 475 |
| CseI | GACGC | 4 cut(s) | 196, 222, 467, 542 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 210, 245, 537, 572 |
| CviAII | CATG | 4 cut(s) | 140, 403, 422, 476 |
| CviJI | RGCY | 5 cut(s) | 106, 111, 302, 524, 625 |
| CviKI_1 | RGCY | 5 cut(s) | 106, 111, 302, 524, 625 |
| DpnI | GATC | 6 cut(s) | 63, 162, 306, 378, 401, 545 |
| DpnII | GATC | 6 cut(s) | 61, 160, 304, 376, 399, 543 |
| Eam1104I | CTCTTC | 1 cut(s) | 348 |
| EarI | CTCTTC | 1 cut(s) | 348 |
| EcoRII | CCWGG | 1 cut(s) | 106 |
| FaeI | CATG | 4 cut(s) | 143, 406, 425, 479 |
| FatI | CATG | 4 cut(s) | 139, 402, 421, 475 |
| FauNDI | CATATG | 1 cut(s) | 463 |
| FbaI | TGATCA | 1 cut(s) | 160 |
| Fnu4HI | GCNGC | 3 cut(s) | 15, 18, 591 |
| Fsp4HI | GCNGC | 3 cut(s) | 15, 18, 591 |
| GlaI | GCGC | 1 cut(s) | 474 |
| GluI | GCNGC | 3 cut(s) | 15, 18, 591 |
| HgaI | GACGC | 4 cut(s) | 196, 222, 467, 542 |
| HhaI | GCGC | 1 cut(s) | 475 |
| Hin1I | GRCGYC | 3 cut(s) | 57, 207, 233 |
| Hin1II | CATG | 4 cut(s) | 143, 406, 425, 479 |
| Hin6I | GCGC | 1 cut(s) | 473 |
| HinP1I | GCGC | 1 cut(s) | 473 |
| HincII | GTYRAC | 1 cut(s) | 427 |
| HindII | GTYRAC | 1 cut(s) | 427 |
| HinfI | GANTC | 1 cut(s) | 618 |
| HpaI | GTTAAC | 1 cut(s) | 427 |
| HphI | GGTGA | 3 cut(s) | 309, 397, 553 |
| Hpy166II | GTNNAC | 1 cut(s) | 427 |
| Hpy188I | TCNGA | 1 cut(s) | 348 |
| Hpy188III | TCNNGA | 1 cut(s) | 211 |
| Hpy8I | GTNNAC | 1 cut(s) | 427 |
| Hpy99I | CGWCG | 4 cut(s) | 59, 62, 212, 238 |
| HpyAV | CCTTC | 1 cut(s) | 347 |
| HpyCH4III | ACNGT | 1 cut(s) | 37 |
| HpyCH4IV | ACGT | 2 cut(s) | 57, 73 |
| HpyCH4V | TGCA | 9 cut(s) | 70, 143, 323, 336, 359, 436, 520, 529, 570 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 11, 526 |
| HpySE526I | ACGT | 2 cut(s) | 57, 73 |
| Hsp92I | GRCGYC | 3 cut(s) | 57, 207, 233 |
| Hsp92II | CATG | 4 cut(s) | 143, 406, 425, 479 |
| HspAI | GCGC | 1 cut(s) | 473 |
| Ksp22I | TGATCA | 1 cut(s) | 160 |
| KspAI | GTTAAC | 1 cut(s) | 427 |
| Kzo9I | GATC | 6 cut(s) | 61, 160, 304, 376, 399, 543 |
| LmnI | GCTCC | 1 cut(s) | 79 |
| LpnPI | CCDG | 7 cut(s) | 93, 120, 333, 415, 515, 580, 635 |
| Lsp1109I | GCAGC | 2 cut(s) | 29, 577 |
| MaeII | ACGT | 2 cut(s) | 57, 73 |
| MaeIII | GTNAC | 3 cut(s) | 31, 37, 280 |
| MalI | GATC | 6 cut(s) | 63, 162, 306, 378, 401, 545 |
| MboI | GATC | 6 cut(s) | 61, 160, 304, 376, 399, 543 |
| MboII | GAAGA | 1 cut(s) | 335 |
| MfeI | CAATTG | 1 cut(s) | 83 |
| MluCI | AATT | 8 cut(s) | 9, 83, 172, 240, 313, 571, 577, 649 |
| MnlI | CCTC | 3 cut(s) | 36, 592, 608 |
| MseI | TTAA | 2 cut(s) | 309, 426 |
| MspR9I | CCNGG | 1 cut(s) | 108 |
| MunI | CAATTG | 1 cut(s) | 83 |
| Mva1269I | GAATGC | 1 cut(s) | 400 |
| MvaI | CCWGG | 1 cut(s) | 108 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 11, 526 |
| NdeI | CATATG | 1 cut(s) | 463 |
| NdeII | GATC | 6 cut(s) | 61, 160, 304, 376, 399, 543 |
| NlaIII | CATG | 4 cut(s) | 143, 406, 425, 479 |
| NmuCI | GTSAC | 2 cut(s) | 31, 37 |
| NspI | RCATGY | 1 cut(s) | 479 |
| PaeI | GCATGC | 1 cut(s) | 479 |
| PaqCI | CACCTGC | 1 cut(s) | 328 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 63 |
| PctI | GAATGC | 1 cut(s) | 400 |
| PfeI | GAWTC | 1 cut(s) | 618 |
| PkrI | GCNGC | 3 cut(s) | 16, 19, 592 |
| Psp1406I | AACGTT | 1 cut(s) | 73 |
| Psp6I | CCWGG | 1 cut(s) | 106 |
| PspGI | CCWGG | 1 cut(s) | 106 |
| SaqAI | TTAA | 2 cut(s) | 309, 426 |
| SatI | GCNGC | 3 cut(s) | 15, 18, 591 |
| Sau3AI | GATC | 6 cut(s) | 61, 160, 304, 376, 399, 543 |
| ScrFI | CCNGG | 1 cut(s) | 108 |
| SetI | ASST | 6 cut(s) | 60, 76, 322, 358, 526, 627 |
| SfcI | CTRYAG | 1 cut(s) | 267 |
| SmlI | CTYRAG | 1 cut(s) | 27 |
| SmoI | CTYRAG | 1 cut(s) | 27 |
| SphI | GCATGC | 1 cut(s) | 479 |
| Sse9I | AATT | 8 cut(s) | 9, 83, 172, 240, 313, 571, 577, 649 |
| SsiI | CCGC | 3 cut(s) | 5, 15, 329 |
| StyD4I | CCNGG | 1 cut(s) | 106 |
| TaaI | ACNGT | 1 cut(s) | 37 |
| TaiI | ACGT | 2 cut(s) | 60, 76 |
| TaqI | TCGA | 3 cut(s) | 60, 210, 236 |
| TasI | AATT | 8 cut(s) | 9, 83, 172, 240, 313, 571, 577, 649 |
| TauI | GCSGC | 1 cut(s) | 17 |
| TfiI | GAWTC | 1 cut(s) | 618 |
| Tru1I | TTAA | 2 cut(s) | 309, 426 |
| Tru9I | TTAA | 2 cut(s) | 309, 426 |
| TseFI | GTSAC | 2 cut(s) | 31, 37 |
| TseI | GCWGC | 2 cut(s) | 17, 590 |
| Tsp45I | GTSAC | 2 cut(s) | 31, 37 |
| TspDTI | ATGAA | 2 cut(s) | 128, 198 |
| TspGWI | ACGGA | 1 cut(s) | 365 |
| XapI | RAATTY | 3 cut(s) | 172, 313, 577 |
| XceI | RCATGY | 1 cut(s) | 479 |
| ZraI | GACGTC | 1 cut(s) | 58 |