Belongs to the UDP-glucose GDP-mannose dehydrogenase family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g02200 FvH4_3g02390 |
| rosa_chinensis | RchiOBHm_Chr5g0001321 RchiOBHm_Chr5g0001331 RchiOBHm_Chr5g0003221 RchiOBHm_Chr5g0003231 |
| rosa_laevigata | RLG00000021396 RLG00000021401 RLG00000030920 RLG00000030921 |
| rosa_multiflora | Rmu_sc0001706.1_g000006 Rmu_sc0001817.1_g000008 Rmu_sc0003749.1_g000021 Rmu_sc0010917.1_g000019 |
| rosa_roxburghii | Rroxscaffold_1G00075000 |
| rosa_rugosa | Rorug02G0582900 Rorug02G0583000 Rorug04G0389800 Rorug04G0389900 Rorug04G0401400 Rorug04G0405100 |
| rosa_samantha | Rh5BG012900 Rh5BG027800 Rh5CG010900 Rh5CG011000 Rh5DG010400 Rh5DG010500 Rh5DG031500 |
| rosa_wichuraiana | Rw0G023560 Rw5G000990 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 167 |
| AccIII | TCCGGA | 1 cut(s) | 49 |
| AciI | CCGC | 1 cut(s) | 38 |
| AcsI | RAATTY | 1 cut(s) | 58 |
| AgsI | TTSAA | 2 cut(s) | 247, 293 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 227 |
| Aor13HI | TCCGGA | 1 cut(s) | 49 |
| ApoI | RAATTY | 1 cut(s) | 58 |
| AspS9I | GGNCC | 2 cut(s) | 14, 52 |
| AsuC2I | CCSGG | 1 cut(s) | 93 |
| AsuHPI | GGTGA | 1 cut(s) | 139 |
| AvaII | GGWCC | 2 cut(s) | 14, 52 |
| BanI | GGYRCC | 1 cut(s) | 167 |
| BbsI | GAAGAC | 1 cut(s) | 270 |
| BcnI | CCSGG | 1 cut(s) | 93 |
| Bme1390I | CCNGG | 1 cut(s) | 93 |
| Bme18I | GGWCC | 2 cut(s) | 14, 52 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 227 |
| BmgT120I | GGNCC | 2 cut(s) | 14, 52 |
| BmiI | GGNNCC | 3 cut(s) | 15, 54, 169 |
| BmrFI | CCNGG | 1 cut(s) | 93 |
| BmsI | GCATC | 1 cut(s) | 171 |
| BpiI | GAAGAC | 1 cut(s) | 270 |
| BpuMI | CCSGG | 1 cut(s) | 93 |
| BsaBI | GATNNNNATC | 2 cut(s) | 138, 246 |
| BsaWI | WCCGGW | 1 cut(s) | 49 |
| Bse1I | ACTGG | 1 cut(s) | 272 |
| Bse8I | GATNNNNATC | 2 cut(s) | 138, 246 |
| BseAI | TCCGGA | 1 cut(s) | 49 |
| BseGI | GGATG | 1 cut(s) | 102 |
| BseJI | GATNNNNATC | 2 cut(s) | 138, 246 |
| BseNI | ACTGG | 1 cut(s) | 272 |
| BshNI | GGYRCC | 1 cut(s) | 167 |
| BsiSI | CCGG | 2 cut(s) | 50, 92 |
| Bsp13I | TCCGGA | 1 cut(s) | 49 |
| Bsp143I | GATC | 2 cut(s) | 7, 139 |
| BspACI | CCGC | 1 cut(s) | 38 |
| BspEI | TCCGGA | 1 cut(s) | 49 |
| BspLI | GGNNCC | 3 cut(s) | 15, 54, 169 |
| BspT107I | GGYRCC | 1 cut(s) | 167 |
| BsrI | ACTGG | 1 cut(s) | 272 |
| BssMI | GATC | 2 cut(s) | 7, 139 |
| Bst6I | CTCTTC | 1 cut(s) | 288 |
| BstF5I | GGATG | 1 cut(s) | 102 |
| BstKTI | GATC | 2 cut(s) | 10, 142 |
| BstMBI | GATC | 2 cut(s) | 7, 139 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 203 |
| BstSCI | CCNGG | 1 cut(s) | 91 |
| BstV2I | GAAGAC | 1 cut(s) | 270 |
| BtsCI | GGATG | 1 cut(s) | 102 |
| Cfr13I | GGNCC | 2 cut(s) | 14, 52 |
| CviAII | CATG | 1 cut(s) | 193 |
| DpnI | GATC | 2 cut(s) | 9, 141 |
| DpnII | GATC | 2 cut(s) | 7, 139 |
| DriI | GACNNNNNGTC | 1 cut(s) | 227 |
| Eam1104I | CTCTTC | 1 cut(s) | 288 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 227 |
| EarI | CTCTTC | 1 cut(s) | 288 |
| Eco47I | GGWCC | 2 cut(s) | 14, 52 |
| EcoO109I | RGGNCCY | 1 cut(s) | 14 |
| FaeI | CATG | 1 cut(s) | 196 |
| FaiI | YATR | 5 cut(s) | 144, 157, 188, 194, 284 |
| FatI | CATG | 1 cut(s) | 192 |
| FokI | GGATG | 1 cut(s) | 89 |
| HapII | CCGG | 2 cut(s) | 50, 92 |
| Hin1II | CATG | 1 cut(s) | 196 |
| HpaII | CCGG | 2 cut(s) | 50, 92 |
| HphI | GGTGA | 1 cut(s) | 139 |
| Hpy188III | TCNNGA | 2 cut(s) | 50, 131 |
| Hpy99I | CGWCG | 1 cut(s) | 233 |
| HpyAV | CCTTC | 1 cut(s) | 116 |
| HpyCH4IV | ACGT | 3 cut(s) | 66, 153, 228 |
| HpyCH4V | TGCA | 2 cut(s) | 162, 190 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 203 |
| HpySE526I | ACGT | 3 cut(s) | 66, 153, 228 |
| Hsp92II | CATG | 1 cut(s) | 196 |
| Kpn2I | TCCGGA | 1 cut(s) | 49 |
| Kzo9I | GATC | 2 cut(s) | 7, 139 |
| LpnPI | CCDG | 5 cut(s) | 63, 105, 116, 193, 253 |
| LweI | GCATC | 1 cut(s) | 171 |
| MaeII | ACGT | 3 cut(s) | 66, 153, 228 |
| MalI | GATC | 2 cut(s) | 9, 141 |
| MboI | GATC | 2 cut(s) | 7, 139 |
| MboII | GAAGA | 4 cut(s) | 38, 80, 116, 275 |
| MluCI | AATT | 1 cut(s) | 58 |
| MnlI | CCTC | 4 cut(s) | 27, 120, 138, 268 |
| MroI | TCCGGA | 1 cut(s) | 49 |
| MseI | TTAA | 2 cut(s) | 21, 225 |
| MspI | CCGG | 2 cut(s) | 50, 92 |
| MspR9I | CCNGG | 1 cut(s) | 93 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 203 |
| NciI | CCSGG | 1 cut(s) | 93 |
| NdeII | GATC | 2 cut(s) | 7, 139 |
| NlaIII | CATG | 1 cut(s) | 196 |
| NlaIV | GGNNCC | 3 cut(s) | 15, 54, 169 |
| PpuMI | RGGWCCY | 1 cut(s) | 14 |
| Psp5II | RGGWCCY | 1 cut(s) | 14 |
| PspN4I | GGNNCC | 3 cut(s) | 15, 54, 169 |
| PspPI | GGNCC | 2 cut(s) | 14, 52 |
| PspPPI | RGGWCCY | 1 cut(s) | 14 |
| SaqAI | TTAA | 2 cut(s) | 21, 225 |
| Sau3AI | GATC | 2 cut(s) | 7, 139 |
| Sau96I | GGNCC | 2 cut(s) | 14, 52 |
| ScrFI | CCNGG | 1 cut(s) | 93 |
| SetI | ASST | 3 cut(s) | 69, 156, 231 |
| SfaNI | GCATC | 1 cut(s) | 171 |
| SgeI | CNNG | 9 cut(s) | 23, 62, 104, 105, 143, 192, 205, 231, 280 |
| SinI | GGWCC | 2 cut(s) | 14, 52 |
| Sse9I | AATT | 1 cut(s) | 58 |
| SsiI | CCGC | 1 cut(s) | 38 |
| StyD4I | CCNGG | 1 cut(s) | 91 |
| TaiI | ACGT | 3 cut(s) | 69, 156, 231 |
| TaqI | TCGA | 2 cut(s) | 138, 261 |
| TasI | AATT | 1 cut(s) | 58 |
| Tru1I | TTAA | 2 cut(s) | 21, 225 |
| Tru9I | TTAA | 2 cut(s) | 21, 225 |
| VpaK11BI | GGWCC | 2 cut(s) | 14, 52 |
| XapI | RAATTY | 1 cut(s) | 58 |