UDP-glucose 6-dehydrogenase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g02200 FvH4_3g02390 |
| rosa_chinensis | RchiOBHm_Chr5g0001321 RchiOBHm_Chr5g0001331 RchiOBHm_Chr5g0003221 RchiOBHm_Chr5g0003231 |
| rosa_laevigata | RLG00000021396 RLG00000021401 RLG00000030920 RLG00000030921 |
| rosa_multiflora | Rmu_sc0001706.1_g000006 Rmu_sc0001817.1_g000008 Rmu_sc0003749.1_g000021 Rmu_sc0010917.1_g000019 |
| rosa_roxburghii | Rroxscaffold_1G00075000 |
| rosa_rugosa | Rorug02G0582900 Rorug02G0583000 Rorug04G0389800 Rorug04G0389900 Rorug04G0401400 Rorug04G0405100 |
| rosa_samantha | Rh5BG012900 Rh5BG027800 Rh5CG010900 Rh5CG011000 Rh5DG010400 Rh5DG010500 Rh5DG031500 |
| rosa_wichuraiana | Rw0G023560 Rw5G000990 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 319 |
| AciI | CCGC | 1 cut(s) | 384 |
| AclWI | GGATC | 2 cut(s) | 140, 269 |
| AgsI | TTSAA | 2 cut(s) | 350, 361 |
| AjiI | CACGTC | 1 cut(s) | 31 |
| AluBI | AGCT | 3 cut(s) | 58, 125, 334 |
| AluI | AGCT | 3 cut(s) | 58, 125, 334 |
| AlwI | GGATC | 2 cut(s) | 140, 269 |
| AspLEI | GCGC | 1 cut(s) | 299 |
| AspS9I | GGNCC | 1 cut(s) | 373 |
| AvaII | GGWCC | 1 cut(s) | 373 |
| BanI | GGYRCC | 1 cut(s) | 319 |
| BccI | CCATC | 1 cut(s) | 253 |
| Bme18I | GGWCC | 1 cut(s) | 373 |
| BmgBI | CACGTC | 1 cut(s) | 31 |
| BmgT120I | GGNCC | 1 cut(s) | 373 |
| BmiI | GGNNCC | 1 cut(s) | 321 |
| BpuEI | CTTGAG | 1 cut(s) | 196 |
| BsaJI | CCNNGG | 1 cut(s) | 210 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 102, 132 |
| BseDI | CCNNGG | 1 cut(s) | 210 |
| BseGI | GGATG | 1 cut(s) | 223 |
| BseRI | GAGGAG | 1 cut(s) | 52 |
| BseYI | CCCAGC | 1 cut(s) | 125 |
| BshNI | GGYRCC | 1 cut(s) | 319 |
| BsiSI | CCGG | 1 cut(s) | 232 |
| Bsp143I | GATC | 3 cut(s) | 135, 145, 274 |
| BspACI | CCGC | 1 cut(s) | 384 |
| BspLI | GGNNCC | 1 cut(s) | 321 |
| BspPI | GGATC | 2 cut(s) | 140, 269 |
| BspT107I | GGYRCC | 1 cut(s) | 319 |
| BssECI | CCNNGG | 1 cut(s) | 210 |
| BssMI | GATC | 3 cut(s) | 135, 145, 274 |
| Bst6I | CTCTTC | 1 cut(s) | 29 |
| BstDEI | CTNAG | 3 cut(s) | 9, 434, 474 |
| BstF5I | GGATG | 1 cut(s) | 223 |
| BstHHI | GCGC | 1 cut(s) | 299 |
| BstKTI | GATC | 3 cut(s) | 138, 148, 277 |
| BstMBI | GATC | 3 cut(s) | 135, 145, 274 |
| BstNSI | RCATGY | 2 cut(s) | 291, 305 |
| BstX2I | RGATCY | 1 cut(s) | 145 |
| BstYI | RGATCY | 1 cut(s) | 145 |
| BtgZI | GCGATG | 1 cut(s) | 272 |
| BtrI | CACGTC | 1 cut(s) | 31 |
| BtsCI | GGATG | 1 cut(s) | 223 |
| CfoI | GCGC | 1 cut(s) | 299 |
| Cfr13I | GGNCC | 1 cut(s) | 373 |
| CviAII | CATG | 2 cut(s) | 288, 302 |
| CviJI | RGCY | 7 cut(s) | 58, 125, 172, 223, 334, 405, 447 |
| CviKI_1 | RGCY | 7 cut(s) | 58, 125, 172, 223, 334, 405, 447 |
| DdeI | CTNAG | 3 cut(s) | 9, 434, 474 |
| DpnI | GATC | 3 cut(s) | 137, 147, 276 |
| DpnII | GATC | 3 cut(s) | 135, 145, 274 |
| Eam1104I | CTCTTC | 1 cut(s) | 29 |
| EarI | CTCTTC | 1 cut(s) | 29 |
| Eco47I | GGWCC | 1 cut(s) | 373 |
| FaeI | CATG | 2 cut(s) | 291, 305 |
| FatI | CATG | 2 cut(s) | 287, 301 |
| FauNDI | CATATG | 1 cut(s) | 441 |
| FokI | GGATG | 1 cut(s) | 230 |
| GlaI | GCGC | 1 cut(s) | 298 |
| GsaI | CCCAGC | 1 cut(s) | 129 |
| HapII | CCGG | 1 cut(s) | 232 |
| HhaI | GCGC | 1 cut(s) | 299 |
| Hin1II | CATG | 2 cut(s) | 291, 305 |
| Hin6I | GCGC | 1 cut(s) | 297 |
| HinP1I | GCGC | 1 cut(s) | 297 |
| HinfI | GANTC | 2 cut(s) | 111, 228 |
| HpaII | CCGG | 1 cut(s) | 232 |
| Hpy188I | TCNGA | 1 cut(s) | 110 |
| Hpy188III | TCNNGA | 2 cut(s) | 133, 251 |
| Hpy99I | CGWCG | 1 cut(s) | 373 |
| HpyAV | CCTTC | 2 cut(s) | 7, 374 |
| HpyCH4IV | ACGT | 1 cut(s) | 30 |
| HpyCH4V | TGCA | 4 cut(s) | 167, 305, 311, 328 |
| HpyF3I | CTNAG | 3 cut(s) | 9, 434, 474 |
| HpySE526I | ACGT | 1 cut(s) | 30 |
| Hsp92II | CATG | 2 cut(s) | 291, 305 |
| HspAI | GCGC | 1 cut(s) | 297 |
| Kzo9I | GATC | 3 cut(s) | 135, 145, 274 |
| LpnPI | CCDG | 4 cut(s) | 111, 164, 245, 344 |
| MaeII | ACGT | 1 cut(s) | 30 |
| MaeIII | GTNAC | 2 cut(s) | 63, 364 |
| MalI | GATC | 3 cut(s) | 137, 147, 276 |
| MboI | GATC | 3 cut(s) | 135, 145, 274 |
| MboII | GAAGA | 1 cut(s) | 46 |
| MflI | RGATCY | 1 cut(s) | 145 |
| MluCI | AATT | 3 cut(s) | 338, 343, 421 |
| MlyI | GAGTC | 1 cut(s) | 120 |
| MnlI | CCTC | 5 cut(s) | 30, 175, 203, 220, 277 |
| MseI | TTAA | 2 cut(s) | 54, 342 |
| MspI | CCGG | 1 cut(s) | 232 |
| NdeI | CATATG | 1 cut(s) | 441 |
| NdeII | GATC | 3 cut(s) | 135, 145, 274 |
| NlaIII | CATG | 2 cut(s) | 291, 305 |
| NlaIV | GGNNCC | 1 cut(s) | 321 |
| NmuCI | GTSAC | 1 cut(s) | 364 |
| NspI | RCATGY | 2 cut(s) | 291, 305 |
| PfeI | GAWTC | 1 cut(s) | 228 |
| PleI | GAGTC | 1 cut(s) | 119 |
| PpsI | GAGTC | 1 cut(s) | 119 |
| PspFI | CCCAGC | 1 cut(s) | 125 |
| PspN4I | GGNNCC | 1 cut(s) | 321 |
| PspPI | GGNCC | 1 cut(s) | 373 |
| PsuI | RGATCY | 1 cut(s) | 145 |
| SaqAI | TTAA | 2 cut(s) | 54, 342 |
| Sau3AI | GATC | 3 cut(s) | 135, 145, 274 |
| Sau96I | GGNCC | 1 cut(s) | 373 |
| SchI | GAGTC | 1 cut(s) | 120 |
| SetI | ASST | 6 cut(s) | 18, 33, 60, 127, 336, 475 |
| SinI | GGWCC | 1 cut(s) | 373 |
| SmlI | CTYRAG | 1 cut(s) | 175 |
| SmoI | CTYRAG | 1 cut(s) | 175 |
| Sse9I | AATT | 3 cut(s) | 338, 343, 421 |
| SsiI | CCGC | 1 cut(s) | 384 |
| SspI | AATATT | 1 cut(s) | 357 |
| TaiI | ACGT | 1 cut(s) | 33 |
| TaqI | TCGA | 3 cut(s) | 134, 270, 426 |
| TasI | AATT | 3 cut(s) | 338, 343, 421 |
| TfiI | GAWTC | 1 cut(s) | 228 |
| Tru1I | TTAA | 2 cut(s) | 54, 342 |
| Tru9I | TTAA | 2 cut(s) | 54, 342 |
| TseFI | GTSAC | 1 cut(s) | 364 |
| Tsp45I | GTSAC | 1 cut(s) | 364 |
| TspDTI | ATGAA | 2 cut(s) | 219, 428 |
| TspGWI | ACGGA | 2 cut(s) | 82, 386 |
| VpaK11BI | GGWCC | 1 cut(s) | 373 |
| XceI | RCATGY | 2 cut(s) | 291, 305 |