FvH4_3g24070

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000498
Physical Location & Seq
Reverse (-)
17098127 .. 17103214
5088 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g24070.t21

Sequence Viewer

Length: 1671 bp
ATGATGGATTTTTCAGACTCTACAAAACTTGTTATCAGCAGAATACAGGAGGTAGACCCAGAAAATGTTACAAAGATTATAGGTTATCTTCTTTTACATGGTCATGGGGAACTTGAAATGGCTCGCTTGGCCCTGGCTCCAGACCATTTGTTTCACCAAGTGGTGTTGAAAGCCAAGGCTGACCTTCTGCGGTTGGCTAGCAAATCAGCACCTTCCATGAATCCACCCTCGGCTGCTTTCGCCCCCTTTTCGCCTGTTTCTTCTACGCCTCCTGCAGCCTTTCGGGTCCCAACTCCTTGTTGGGATCCCCAACTTGTTTCGAAGCAGAACATGATGCCATTTGAATTCTCCGATCCTGTGGAGGAACTGCAAAACCAGGCTCGATTTTTGAGTTTGGAGGATCAAATGGAACCGCTCAATTCTGGGATTTCAGGATACCCAGATGAGTACTATTATCATGATGCTGCACTAGGCGGAAGCTTAAGTCCTAGACCAGGCAGACGATTCTCAAGTCTAGAGTTTCCGGTTAAGATTTGTCACTACTTTAGTAAGGGCTTTTGTAAGCATGGAAGCAGCTGTAGATATTACCATGGACAAGTGATTCCAGATAGCTTCTCTCAGATGTATGGGAATGATGGCCTTATTGATGATCATGTTATCTTGCCCATGTCTCTTGAGAAGTTGGAGTGGGAAATTGTTGAGCTGCTTAGATCAAGAAGGGGGACTCCTATTTCAATTGCTTCTCTGCCAATGATGTATTATGAGAAATTTGGAAAATCTCTTCAGGCAGAAGGCTATCTCACCGAAAGCCAGAGACATGGGAAAGCTGGTTACAGTTTGACAAAGCTTCTTGCCCGGCTTGGAAGCAGCATACGGCTGATTGACAGGCCTCATGGGCAGCACGCAATAATATTAGCTGAAGACTCTTTAAAATACATGGACCACCGGAATGAGAGAGGCGATCCTGGTCCAATTGTTAGTGGTTCACGGCAAATATACTTGACATTTCCAGCTGACAGCACCTTTAGTGAGGATGATGTCTCTAACTACTTCAACACCTTTGGCCCTGTTGAAGACGTAAGGATCCCTTGCCAACCTAAGAGGATGTTTGGGTTTGTAACCTTTGTACATGCAGACACTGTGACAATGATCTTGTCCAAAGGAAATCCTCATTTTGTTTGCGGGGCTCGTGTTCTTGTGAAACCTTACAGGGAAAAATCAAAGCTTGCTGAAAGAAAGTACCAAGAGAGAATGGAGCCAGCTGATCACTATTCTCCACACTTTTCAGACATGGAACCCGAGTTTCATTCAATGTCAAGATGCTATAATAATTCTAGATGGCTGCGGAAGAAGCTGTTGGAAGAACAAGAAATTGCACTTGAACTGGAGAGGAGTAGGCTGGCTCAGCTGCATTTTACGCGAATACCGGTTGCTAATCAGCCCTATTCTGGTTATGTAATGGATGGGCGAATGGTCTCTGAAGATAATTTCAACTTCCCGCCTGCAGAATGTTTTGATTTTCTGTTAGATGTTATAAACAATGGGTCTACAAGTGATGATAAACCCAAACATACAGGCACCAACTACACCGACCAAGATAGTCAAGGACTTAATCTCCCAGATAGCCCATTTGCAACTTCGATAGCTAGTGGCATTTCAGCTGTCATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
OST-HTH RRM_1 zf-CCCH

Protein Analysis

557

Amino Acids

62.76

Weight (kDa)

5.93

Isoelectric Point (pI)

46.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PABC_AtC3H46 PF23182 2 - 63 6e-27 AtC3H46 PABC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000498)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G05160 AT2G05160 AT2G05160
fragaria_vesca FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_6g40900 FvH4_6g40900 FvH4_6g40900 FvH4_6g40900 FvH4_6g40900 FvH4_6g40900 FvH4_6g40900
malus_domestica MD03G1188600.v1.1 MD09G1123600.v1.1 MD17G1114400.v1.1
prunus_persica Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1
pyrus_communis pycom03g14150 pycom09g04760 pycom17g10570
rosa_chinensis RchiOBHm_Chr2g0156481 RchiOBHm_Chr5g0042651
rosa_laevigata RLG00000020916 RLG00000034148
rosa_multiflora Rmu_sc0004355.1_g000004 Rmu_sc0005392.1_g000010
rosa_roxburghii Rroxscaffold_1G00037990 Rroxscaffold_2G00093000
rosa_rugosa Rorug02G0453300 Rorug02G0453400 Rorug02G0453500 Rorug02G0453600 Rorug05G0203500 Rorug05G0203500 Rorug05G0203600.1 Rorug05G0203700
rosa_samantha Rh2AG519700 Rh2BG532000 Rh2CG504700 Rh2DG541000 Rh5AG288800 Rh5BG292900 Rh5CG325300 Rh5DG302800
rosa_wichuraiana Rw2G042840 Rw5G026790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1535
AccB1I GGYRCC 1 cut(s) 1577
AccBSI CCGCTC 1 cut(s) 415
AccI GTMKAC 2 cut(s) 54, 1547
AccII CGCG 1 cut(s) 1420
AciI CCGC 6 cut(s) 190, 413, 474, 1182, 1345, 1499
AclWI GGATC 7 cut(s) 299, 312, 347, 408, 956, 1078, 1091
AcsI RAATTY 2 cut(s) 344, 767
AcuI CTGAAG 3 cut(s) 767, 939, 1500
AdeI CACNNNGTG 1 cut(s) 160
AfaI GTAC 3 cut(s) 449, 1128, 1241
AfiI CCNNNNNNNGG 2 cut(s) 494, 1448
AflII CTTAAG 1 cut(s) 481
AgeI ACCGGT 1 cut(s) 1426
AgsI TTSAA 9 cut(s) 116, 169, 344, 735, 1054, 1073, 1311, 1382, 1492
AjnI CCWGG 4 cut(s) 132, 375, 493, 964
AjuI GAANNNNNNNTTGG 2 cut(s) 1340, 1372
Alw26I GTCTC 4 cut(s) 675, 808, 1045, 1480
AlwI GGATC 7 cut(s) 299, 312, 347, 408, 956, 1078, 1091
AlwNI CAGNNNCTG 1 cut(s) 1139
Ama87I CYCGRG 1 cut(s) 1298
AoxI GGCC 4 cut(s) 129, 637, 887, 1063
ApeKI GCWGC 9 cut(s) 233, 275, 464, 573, 703, 867, 898, 1342, 1408
ApoI RAATTY 2 cut(s) 344, 767
AsiGI ACCGGT 1 cut(s) 1426
AspS9I GGNCC 5 cut(s) 130, 286, 940, 968, 1064
AsuC2I CCSGG 1 cut(s) 856
AsuHPI GGTGA 2 cut(s) 146, 793
AsuII TTCGAA 1 cut(s) 320
AsuNHI GCTAGC 1 cut(s) 197
AvaI CYCGRG 1 cut(s) 1298
AvaII GGWCC 3 cut(s) 286, 940, 968
BamHI GGATCC 2 cut(s) 304, 1083
BanI GGYRCC 1 cut(s) 1577
BanII GRGCYC 1 cut(s) 1189
BauI CACGAG 1 cut(s) 1188
BbsI GAAGAC 2 cut(s) 927, 1080
BbvI GCAGC 9 cut(s) 220, 287, 451, 585, 690, 879, 910, 1329, 1395
BccI CCATC 3 cut(s) 629, 1332, 1457
BceAI ACGGC 2 cut(s) 890, 1004
BciT130I CCWGG 4 cut(s) 134, 377, 495, 966
BciVI GTATCC 1 cut(s) 428
BclI TGATCA 2 cut(s) 649, 1264
BcnI CCSGG 1 cut(s) 856
BcoDI GTCTC 4 cut(s) 675, 808, 1045, 1480
BfaI CTAG 6 cut(s) 198, 470, 489, 515, 1335, 1647
BfmI CTRYAG 3 cut(s) 273, 577, 1503
BfrI CTTAAG 1 cut(s) 481
BfuI GTATCC 1 cut(s) 428
BglI GCCNNNNNGGC 1 cut(s) 895
BisI GCNGC 9 cut(s) 234, 276, 465, 574, 704, 868, 899, 1343, 1409
BlpI GCTNAGC 1 cut(s) 1404
BlsI GCNGC 9 cut(s) 235, 277, 466, 575, 705, 869, 900, 1344, 1410
BmcAI AGTACT 1 cut(s) 449
Bme1390I CCNGG 5 cut(s) 134, 377, 495, 856, 966
Bme18I GGWCC 3 cut(s) 286, 940, 968
BmeT110I CYCGRG 1 cut(s) 1298
BmgT120I GGNCC 5 cut(s) 130, 286, 940, 968, 1064
BmiI GGNNCC 9 cut(s) 138, 287, 288, 306, 411, 1085, 1257, 1296, 1579
BmrFI CCNGG 5 cut(s) 134, 377, 495, 856, 966
BmsI GCATC 3 cut(s) 324, 451, 1310
BmtI GCTAGC 1 cut(s) 201
BpiI GAAGAC 2 cut(s) 927, 1080
BpmI CTGGAG 2 cut(s) 123, 1406
Bpu1102I GCTNAGC 1 cut(s) 1404
Bpu14I TTCGAA 1 cut(s) 320
BpuEI CTTGAG 2 cut(s) 493, 695
BpuMI CCSGG 1 cut(s) 856
BsaI GGTCTC 1 cut(s) 1480
BsaJI CCNNGG 4 cut(s) 132, 174, 228, 589
BsaWI WCCGGW 3 cut(s) 523, 945, 1426
BsaXI ACNNNNNCTCC 2 cut(s) 1599, 1629
Bsc4I CCNNNNNNNGG 2 cut(s) 494, 1448
Bse118I RCCGGY 1 cut(s) 1426
Bse1I ACTGG 1 cut(s) 1389
BseBI CCWGG 4 cut(s) 134, 377, 495, 966
BseDI CCNNGG 4 cut(s) 132, 174, 228, 589
BseGI GGATG 3 cut(s) 1039, 1110, 1468
BseLI CCNNNNNNNGG 2 cut(s) 494, 1448
BseMII CTCAG 2 cut(s) 632, 1418
BseNI ACTGG 1 cut(s) 1389
BseRI GAGGAG 1 cut(s) 1405
BseXI GCAGC 9 cut(s) 220, 287, 451, 585, 690, 879, 910, 1329, 1395
BsgI GTGCAG 1 cut(s) 450
Bsh1236I CGCG 1 cut(s) 1420
BshFI GGCC 4 cut(s) 131, 639, 889, 1065
BshNI GGYRCC 1 cut(s) 1577
BshTI ACCGGT 1 cut(s) 1426
BsiHKCI CYCGRG 1 cut(s) 1298
BsiSI CCGG 4 cut(s) 524, 856, 946, 1427
BslFI GGGAC 2 cut(s) 272, 736
BslI CCNNNNNNNGG 2 cut(s) 494, 1448
BsmAI GTCTC 4 cut(s) 675, 808, 1045, 1480
BsmFI GGGAC 2 cut(s) 272, 736
BsnI GGCC 4 cut(s) 131, 639, 889, 1065
Bso31I GGTCTC 1 cut(s) 1480
BsoBI CYCGRG 1 cut(s) 1298
Bsp119I TTCGAA 1 cut(s) 320
Bsp1286I GDGCHC 1 cut(s) 1189
Bsp1407I TGTACA 1 cut(s) 1126
Bsp143I GATC 9 cut(s) 304, 352, 400, 649, 710, 961, 1083, 1149, 1264
Bsp1720I GCTNAGC 1 cut(s) 1404
Bsp19I CCATGG 1 cut(s) 589
BspACI CCGC 6 cut(s) 190, 413, 474, 1182, 1345, 1499
BspANI GGCC 4 cut(s) 131, 639, 889, 1065
BspCNI CTCAG 2 cut(s) 631, 1417
BspFNI CGCG 1 cut(s) 1420
BspHI TCATGA 1 cut(s) 457
BspLI GGNNCC 9 cut(s) 138, 287, 288, 306, 411, 1085, 1257, 1296, 1579
BspMAI CTGCAG 2 cut(s) 277, 1507
BspOI GCTAGC 1 cut(s) 201
BspPI GGATC 7 cut(s) 299, 312, 347, 408, 956, 1078, 1091
BspT104I TTCGAA 1 cut(s) 320
BspT107I GGYRCC 1 cut(s) 1577
BspTI CTTAAG 1 cut(s) 481
BspTNI GGTCTC 1 cut(s) 1480
BsrBI CCGCTC 1 cut(s) 415
BsrFI RCCGGY 1 cut(s) 1426
BsrGI TGTACA 1 cut(s) 1126
BsrI ACTGG 1 cut(s) 1389
BssAI RCCGGY 1 cut(s) 1426
BssECI CCNNGG 4 cut(s) 132, 174, 228, 589
BssMI GATC 9 cut(s) 304, 352, 400, 649, 710, 961, 1083, 1149, 1264
BssSI CACGAG 1 cut(s) 1188
BssT1I CCWWGG 2 cut(s) 174, 589
Bst2BI CACGAG 1 cut(s) 1188
Bst2UI CCWGG 4 cut(s) 134, 377, 495, 966
Bst4CI ACNGT 2 cut(s) 836, 1141
Bst6I CTCTTC 1 cut(s) 786
BstAFI CTTAAG 1 cut(s) 481
BstAUI TGTACA 1 cut(s) 1126
BstBI TTCGAA 1 cut(s) 320
BstC8I GCNNGC 7 cut(s) 124, 199, 903, 1227, 1260, 1401, 1503
BstDEI CTNAG 4 cut(s) 618, 707, 1098, 1404
BstDSI CCRYGG 1 cut(s) 589
BstENI CCTNNNNNAGG 1 cut(s) 492
BstF5I GGATG 3 cut(s) 1039, 1110, 1468
BstFNI CGCG 1 cut(s) 1420
BstKTI GATC 9 cut(s) 307, 355, 403, 652, 713, 964, 1086, 1152, 1267
BstMAI GTCTC 4 cut(s) 675, 808, 1045, 1480
BstMBI GATC 9 cut(s) 304, 352, 400, 649, 710, 961, 1083, 1149, 1264
BstMWI GCNNNNNNNGC 6 cut(s) 128, 239, 895, 1351, 1405, 1417
BstNI CCWGG 4 cut(s) 134, 377, 495, 966
BstNSI RCATGY 1 cut(s) 1133
BstSCI CCNGG 5 cut(s) 132, 375, 493, 854, 964
BstSFI CTRYAG 3 cut(s) 273, 577, 1503
BstUI CGCG 1 cut(s) 1420
BstV1I GCAGC 9 cut(s) 220, 287, 451, 585, 690, 879, 910, 1329, 1395
BstV2I GAAGAC 2 cut(s) 927, 1080
BstX2I RGATCY 2 cut(s) 304, 1083
BstXI CCANNNNNNTGG 1 cut(s) 818
BstYI RGATCY 2 cut(s) 304, 1083
BsuI GTATCC 1 cut(s) 428
BsuRI GGCC 4 cut(s) 131, 639, 889, 1065
BtgI CCRYGG 1 cut(s) 589
BtsCI GGATG 3 cut(s) 1039, 1110, 1468
BtsIMutI CAGTG 1 cut(s) 1137
Cac8I GCNNGC 7 cut(s) 124, 199, 903, 1227, 1260, 1401, 1503
CaiI CAGNNNCTG 1 cut(s) 1139
CciI TCATGA 1 cut(s) 457
Cfr10I RCCGGY 1 cut(s) 1426
Cfr13I GGNCC 5 cut(s) 130, 286, 940, 968, 1064
Csp6I GTAC 3 cut(s) 448, 1127, 1240
CspAI ACCGGT 1 cut(s) 1426
CviQI GTAC 3 cut(s) 448, 1127, 1240
DdeI CTNAG 4 cut(s) 618, 707, 1098, 1404
DpnI GATC 9 cut(s) 306, 354, 402, 651, 712, 963, 1085, 1151, 1266
DpnII GATC 9 cut(s) 304, 352, 400, 649, 710, 961, 1083, 1149, 1264
DraI TTTAAA 1 cut(s) 930
DraIII CACNNNGTG 1 cut(s) 160
Eam1104I CTCTTC 1 cut(s) 786
EarI CTCTTC 1 cut(s) 786
EciI GGCGGA 1 cut(s) 489
Eco130I CCWWGG 2 cut(s) 174, 589
Eco147I AGGCCT 1 cut(s) 889
Eco24I GRGCYC 1 cut(s) 1189
Eco31I GGTCTC 1 cut(s) 1480
Eco47I GGWCC 3 cut(s) 286, 940, 968
Eco57I CTGAAG 3 cut(s) 767, 939, 1500
Eco88I CYCGRG 1 cut(s) 1298
EcoNI CCTNNNNNAGG 1 cut(s) 492
EcoO109I RGGNCCY 1 cut(s) 286
EcoRI GAATTC 1 cut(s) 344
EcoRII CCWGG 4 cut(s) 132, 375, 493, 964
EcoT14I CCWWGG 2 cut(s) 174, 589
EcoT38I GRGCYC 1 cut(s) 1189
ErhI CCWWGG 2 cut(s) 174, 589
FalI AAGNNNNNCTT 2 cut(s) 1072, 1104
FaqI GGGAC 2 cut(s) 272, 736
FauI CCCGC 2 cut(s) 1175, 1506
FbaI TGATCA 2 cut(s) 649, 1264
FblI GTMKAC 2 cut(s) 54, 1547
Fnu4HI GCNGC 9 cut(s) 234, 276, 465, 574, 704, 868, 899, 1343, 1409
FokI GGATG 3 cut(s) 1046, 1117, 1475
FriOI GRGCYC 1 cut(s) 1189
Fsp4HI GCNGC 9 cut(s) 234, 276, 465, 574, 704, 868, 899, 1343, 1409
FspBI CTAG 6 cut(s) 198, 470, 489, 515, 1335, 1647
GluI GCNGC 9 cut(s) 234, 276, 465, 574, 704, 868, 899, 1343, 1409
GsuI CTGGAG 2 cut(s) 123, 1406
HaeIII GGCC 4 cut(s) 131, 639, 889, 1065
HapII CCGG 4 cut(s) 524, 856, 946, 1427
HindIII AAGCTT 3 cut(s) 478, 845, 1223
HinfI GANTC 6 cut(s) 17, 220, 504, 601, 724, 923
HpaII CCGG 4 cut(s) 524, 856, 946, 1427
HphI GGTGA 2 cut(s) 146, 793
Hpy166II GTNNAC 3 cut(s) 55, 986, 1548
Hpy188I TCNGA 5 cut(s) 16, 352, 621, 1288, 1480
Hpy188III TCNNGA 9 cut(s) 140, 432, 458, 515, 605, 674, 714, 1317, 1335
Hpy8I GTNNAC 3 cut(s) 55, 986, 1548
HpyAV CCTTC 4 cut(s) 194, 222, 711, 785
HpyCH4III ACNGT 2 cut(s) 836, 1141
HpyCH4IV ACGT 1 cut(s) 1077
HpyCH4V TGCA 8 cut(s) 275, 370, 467, 1133, 1376, 1411, 1505, 1634
HpyF10VI GCNNNNNNNGC 6 cut(s) 128, 239, 895, 1351, 1405, 1417
HpyF3I CTNAG 4 cut(s) 618, 707, 1098, 1404
HpySE526I ACGT 1 cut(s) 1077
KflI GGGWCCC 1 cut(s) 286
Ksp22I TGATCA 2 cut(s) 649, 1264
Kzo9I GATC 9 cut(s) 304, 352, 400, 649, 710, 961, 1083, 1149, 1264
LmnI GCTCC 2 cut(s) 142, 1255
Lsp1109I GCAGC 9 cut(s) 220, 287, 451, 585, 690, 879, 910, 1329, 1395
LweI GCATC 3 cut(s) 324, 451, 1310
MaeI CTAG 6 cut(s) 198, 470, 489, 515, 1335, 1647
MaeII ACGT 1 cut(s) 1077
MaeIII GTNAC 5 cut(s) 67, 536, 830, 1117, 1141
MalI GATC 9 cut(s) 306, 354, 402, 651, 712, 963, 1085, 1151, 1266
MbiI CCGCTC 1 cut(s) 415
MboI GATC 9 cut(s) 304, 352, 400, 649, 710, 961, 1083, 1149, 1264
MboII GAAGA 8 cut(s) 80, 252, 773, 932, 1085, 1360, 1373, 1493
MfeI CAATTG 2 cut(s) 735, 972
MflI RGATCY 2 cut(s) 304, 1083
MhlI GDGCHC 1 cut(s) 1189
MluCI AATT 9 cut(s) 344, 418, 693, 735, 767, 972, 1330, 1371, 1486
MlyI GAGTC 3 cut(s) 11, 718, 917
MmeI TCCRAC 2 cut(s) 663, 1338
MseI TTAA 4 cut(s) 482, 528, 929, 1611
MslI CAYNNNNRTG 2 cut(s) 102, 948
MspA1I CMGCKG 5 cut(s) 576, 1013, 1262, 1408, 1661
MspCI CTTAAG 1 cut(s) 481
MspI CCGG 4 cut(s) 524, 856, 946, 1427
MspR9I CCNGG 5 cut(s) 134, 377, 495, 856, 966
MunI CAATTG 2 cut(s) 735, 972
MvaI CCWGG 4 cut(s) 134, 377, 495, 966
MvnI CGCG 1 cut(s) 1420
MwoI GCNNNNNNNGC 6 cut(s) 128, 239, 895, 1351, 1405, 1417
NciI CCSGG 1 cut(s) 856
NcoI CCATGG 1 cut(s) 589
NdeII GATC 9 cut(s) 304, 352, 400, 649, 710, 961, 1083, 1149, 1264
NheI GCTAGC 1 cut(s) 197
NlaIV GGNNCC 9 cut(s) 138, 287, 288, 306, 411, 1085, 1257, 1296, 1579
NmeAIII GCCGAG 1 cut(s) 209
NmuCI GTSAC 2 cut(s) 536, 1141
NspI RCATGY 1 cut(s) 1133
NspV TTCGAA 1 cut(s) 320
PagI TCATGA 1 cut(s) 457
PceI AGGCCT 1 cut(s) 889
PfeI GAWTC 3 cut(s) 220, 504, 601
PinAI ACCGGT 1 cut(s) 1426
PkrI GCNGC 9 cut(s) 235, 277, 466, 575, 705, 869, 900, 1344, 1410
PleI GAGTC 3 cut(s) 11, 718, 917
PpsI GAGTC 3 cut(s) 11, 718, 917
PpuMI RGGWCCY 1 cut(s) 286
PsiI TTATAA 1 cut(s) 1535
Psp5II RGGWCCY 1 cut(s) 286
Psp6I CCWGG 4 cut(s) 132, 375, 493, 964
PspGI CCWGG 4 cut(s) 132, 375, 493, 964
PspN4I GGNNCC 9 cut(s) 138, 287, 288, 306, 411, 1085, 1257, 1296, 1579
PspPI GGNCC 5 cut(s) 130, 286, 940, 968, 1064
PspPPI RGGWCCY 1 cut(s) 286
PstI CTGCAG 2 cut(s) 277, 1507
PstNI CAGNNNCTG 1 cut(s) 1139
PsuI RGATCY 2 cut(s) 304, 1083
PvuII CAGCTG 5 cut(s) 576, 1013, 1262, 1408, 1661
RsaI GTAC 3 cut(s) 449, 1128, 1241
RsaNI GTAC 3 cut(s) 448, 1127, 1240
RseI CAYNNNNRTG 2 cut(s) 102, 948
SaqAI TTAA 4 cut(s) 482, 528, 929, 1611
SatI GCNGC 9 cut(s) 234, 276, 465, 574, 704, 868, 899, 1343, 1409
Sau3AI GATC 9 cut(s) 304, 352, 400, 649, 710, 961, 1083, 1149, 1264
Sau96I GGNCC 5 cut(s) 130, 286, 940, 968, 1064
ScaI AGTACT 1 cut(s) 449
SchI GAGTC 3 cut(s) 11, 718, 917
ScrFI CCNGG 5 cut(s) 134, 377, 495, 856, 966
SduI GDGCHC 1 cut(s) 1189
SfaNI GCATC 3 cut(s) 324, 451, 1310
SfcI CTRYAG 3 cut(s) 273, 577, 1503
SfuI TTCGAA 1 cut(s) 320
SinI GGWCC 3 cut(s) 286, 940, 968
SmiMI CAYNNNNRTG 2 cut(s) 102, 948
SmlI CTYRAG 3 cut(s) 481, 508, 674
SmoI CTYRAG 3 cut(s) 481, 508, 674
Sse9I AATT 9 cut(s) 344, 418, 693, 735, 767, 972, 1330, 1371, 1486
SseBI AGGCCT 1 cut(s) 889
SsiI CCGC 6 cut(s) 190, 413, 474, 1182, 1345, 1499
SspI AATATT 1 cut(s) 912
SspMI CTAG 6 cut(s) 198, 470, 489, 515, 1335, 1647
StuI AGGCCT 1 cut(s) 889
StyD4I CCNGG 5 cut(s) 132, 375, 493, 854, 964
StyI CCWWGG 2 cut(s) 174, 589
TaaI ACNGT 2 cut(s) 836, 1141
TaiI ACGT 1 cut(s) 1080
TaqI TCGA 3 cut(s) 320, 382, 1640
TasI AATT 9 cut(s) 344, 418, 693, 735, 767, 972, 1330, 1371, 1486
TatI WGTACW 2 cut(s) 447, 1126
TfiI GAWTC 3 cut(s) 220, 504, 601
Tru1I TTAA 4 cut(s) 482, 528, 929, 1611
Tru9I TTAA 4 cut(s) 482, 528, 929, 1611
TscAI CASTG 1 cut(s) 1144
TseFI GTSAC 2 cut(s) 536, 1141
TseI GCWGC 9 cut(s) 233, 275, 464, 573, 703, 867, 898, 1342, 1408
Tsp45I GTSAC 2 cut(s) 536, 1141
TspDTI ATGAA 2 cut(s) 233, 1295
TspRI CASTG 1 cut(s) 1144
Vha464I CTTAAG 1 cut(s) 481
VpaK11BI GGWCC 3 cut(s) 286, 940, 968
XagI CCTNNNNNAGG 1 cut(s) 492
XapI RAATTY 2 cut(s) 344, 767
XbaI TCTAGA 2 cut(s) 514, 1334
XceI RCATGY 1 cut(s) 1133
XcmI CCANNNNNNNNNTGG 1 cut(s) 297
XmiI GTMKAC 2 cut(s) 54, 1547
XspI CTAG 6 cut(s) 198, 470, 489, 515, 1335, 1647
ZrmI AGTACT 1 cut(s) 449
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.