Prupe.4G234600_v2.0.a1

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000498
Physical Location & Seq
Reverse (-)
15128852 .. 15132831
3980 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G234600.8

Sequence Viewer

Length: 1695 bp
ATGGATTTTTCTGAGTATACAAACGCTGTTTACAGTAGAATCCAGAAACTAGAACCAGACAATGCTACAAAGATTATAGGCTATCTTCTTTTACAAGACTATGGTGAGCAGGAGATGGCTCGTTTGGCTATGGCTCCAGAGCACTTGATTCACCAAGTGATAGTCAAAGCCAAGACTGAACTTCAGCAGTTGGCTGCTAAGTCAGTGGCATCCCCAATCTCACCTTCTTTGAACCCAGTAACAGGGGCTTTCGCTCCTTATTTGCCCGTTTCGTCGAGGCCTTTCTCGTCTCCGGCAGCCATTCGAGTCCCAACTGCCTTTTGGGATGCGCAACTAGTTGCTAAACAAAGCCCAGATTTTATGCCATTGGGTTACCCTGACTCTATTGCAGAACTGCAAAACCAGGCTCAGTTTTTGAGTTTGGAGGATCAAATAGAACCACTCAATTCTGGGATTTCTGGATTCTCTAATGATTACTACCGGGACGCTGAAATAGACAACTTAAGTGTTAGAACTGGTAGACGATTTTCAAGCGTGACAGAGTTTCCAGTTAAGATTTGTCACTATTTCAATAAGGGATTTTGTAAGCATGGAAGTAGCTGTAGGTATTACCACGGACAAGTGATTCCTGAGAGCTTCTCTCAGATGTATGGCAATGATTGCATTAATGATGATCATGTTATCTCACCGGGGTCTCTTGAGAAGTTGGAGTGGGAAATCACTGAGCTGCTTAGATCAAGAAGAGGAATTCCTATTTCAATTGCTTCTCTGCCAATGATGTATTATGACAAATTTGGAAAATCTCTTCAGGCAGAAGGCTACCTCACTGAAAGCCAGAGACATGGCAAGGCTGGTTACAGCTTGACAAAGCTTCTTGCTCGACTGGGAAGCAGTATTCGGCTGATTGACAGGCCTCATGGGCAGCATGCAGTAATTTTGGCTGAAGACTCTCCGAAATACGCAGATCATCGGAACGAGAAAGGTGATCCTGGTCCTATTGTTAGCGGTTCGCGACAGATATATCTAACATTTCCAGCAGAGAGCACTTTCAGTGAAGATGATGTCTCAAACTACTTCAGTACCTTTGGCCCTGTTGAAGATGTCAGGATTCCCTGCCAACAGAAACGGATGTTTGGGTTTGTTACCTTTGTCCATGCCGATACTGTGAAAATGATTTTGGCAAAAGGAAATCCGCATTATGTTTGTGGGTCTCGTGTTCTTGTGAAACCTTACAGGGAAAAATCAAAGCTTGTTGACAGAAAGCACCAAGAGAGAATGGATCCTGCGGCATATTTATCTCAACACCACGCAGACATGGAATCAGATTTTTATTCAATGTCAGTAGGCTGTGACAACTCTAGATTGTTAAGGAAGAAGCTTGTGGAAGAGCAAGAATATGCGATTGAACTTGAGAGGATGAGGCTGGCAGGGCTGCATTTTGCACGAAAGCCTGTGGCTAATCATCCCCATTCTAGTTACTTCATGGATGGGCACAAATTCTCAGAAGATAATTTCAACTTCCCGTCTGCGGAATGTTTCAATTATCTGTTTGATGTTCTAAACAGTGGGTCTACAAGTGATGATAAACACAAGCATACAGACACCAATTACACTGACCATGAAAGCCAAGGACTTAATCTCCCAGATAGCCCATTTGCAACTTCAGTAGCTAGTGGCATTTCAGCAGTCATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
OST-HTH RRM_1 zf-CCCH

Protein Analysis

565

Amino Acids

63.46

Weight (kDa)

6.06

Isoelectric Point (pI)

50.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000498)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G05160 AT2G05160 AT2G05160
fragaria_vesca FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_6g40900 FvH4_6g40900 FvH4_6g40900 FvH4_6g40900 FvH4_6g40900 FvH4_6g40900 FvH4_6g40900
malus_domestica MD03G1188600.v1.1 MD09G1123600.v1.1 MD17G1114400.v1.1
prunus_persica Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1
pyrus_communis pycom03g14150 pycom09g04760 pycom17g10570
rosa_chinensis RchiOBHm_Chr2g0156481 RchiOBHm_Chr5g0042651
rosa_laevigata RLG00000020916 RLG00000034148
rosa_multiflora Rmu_sc0004355.1_g000004 Rmu_sc0005392.1_g000010
rosa_roxburghii Rroxscaffold_1G00037990 Rroxscaffold_2G00093000
rosa_rugosa Rorug02G0453300 Rorug02G0453400 Rorug02G0453500 Rorug02G0453600 Rorug05G0203500 Rorug05G0203500 Rorug05G0203600.1 Rorug05G0203700
rosa_samantha Rh2AG519700 Rh2BG532000 Rh2CG504700 Rh2DG541000 Rh5AG288800 Rh5BG292900 Rh5CG325300 Rh5DG302800
rosa_wichuraiana Rw2G042840 Rw5G026790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 330
AccI GTMKAC 3 cut(s) 17, 520, 1571
AccII CGCG 1 cut(s) 1012
AciI CCGC 4 cut(s) 1005, 1193, 1286, 1529
AclWI GGATC 4 cut(s) 435, 980, 1274, 1287
AcsI RAATTY 3 cut(s) 747, 791, 1496
AcuI CTGAAG 5 cut(s) 167, 791, 963, 1060, 1647
AdeI CACNNNGTG 1 cut(s) 157
AfaI GTAC 1 cut(s) 1081
AfiI CCNNNNNNNGG 2 cut(s) 242, 1528
AflII CTTAAG 1 cut(s) 502
AgsI TTSAA 9 cut(s) 232, 531, 571, 759, 1097, 1335, 1406, 1516, 1540
AhlI ACTAGT 1 cut(s) 334
AjnI CCWGG 2 cut(s) 402, 988
AjuI GAANNNNNNNTTGG 4 cut(s) 208, 240, 1160, 1192
AluBI AGCT 8 cut(s) 600, 636, 727, 861, 871, 1249, 1378, 1670
AluI AGCT 8 cut(s) 600, 636, 727, 861, 871, 1249, 1378, 1670
Alw21I GWGCWC 2 cut(s) 144, 1046
Alw26I GTCTC 5 cut(s) 294, 699, 832, 1069, 1215
AlwI GGATC 4 cut(s) 435, 980, 1274, 1287
AoxI GGCC 3 cut(s) 278, 911, 1087
ApeKI GCWGC 5 cut(s) 194, 296, 727, 922, 1432
ApoI RAATTY 3 cut(s) 747, 791, 1496
AseI ATTAAT 1 cut(s) 666
AspLEI GCGC 1 cut(s) 331
AspS9I GGNCC 2 cut(s) 992, 1088
AsuC2I CCSGG 2 cut(s) 482, 690
AsuHPI GGTGA 5 cut(s) 116, 143, 213, 678, 995
AvaII GGWCC 1 cut(s) 992
BaeGI GKGCMC 1 cut(s) 1494
BaeI ACNNNNGTAYC 2 cut(s) 1063, 1096
BamHI GGATCC 1 cut(s) 1279
BauI CACGAG 1 cut(s) 1212
BbsI GAAGAC 1 cut(s) 951
Bbv12I GWGCWC 2 cut(s) 144, 1046
BbvI GCAGC 5 cut(s) 181, 308, 714, 934, 1419
BccI CCATC 2 cut(s) 109, 1481
BciT130I CCWGG 2 cut(s) 404, 990
BclI TGATCA 1 cut(s) 673
BcnI CCSGG 2 cut(s) 482, 690
BcoDI GTCTC 5 cut(s) 294, 699, 832, 1069, 1215
BcuI ACTAGT 1 cut(s) 334
BfaI CTAG 5 cut(s) 50, 335, 1359, 1473, 1671
BfmI CTRYAG 1 cut(s) 601
BfrI CTTAAG 1 cut(s) 502
BglI GCCNNNNNGGC 1 cut(s) 919
BisI GCNGC 6 cut(s) 195, 297, 728, 923, 1287, 1433
BlsI GCNGC 6 cut(s) 196, 298, 729, 924, 1288, 1434
Bme1390I CCNGG 4 cut(s) 404, 482, 690, 990
Bme18I GGWCC 1 cut(s) 992
BmgT120I GGNCC 2 cut(s) 992, 1088
BmiI GGNNCC 2 cut(s) 135, 1281
BmrFI CCNGG 4 cut(s) 404, 482, 690, 990
BmrI ACTGGG 2 cut(s) 230, 893
BmsI GCATC 2 cut(s) 218, 316
BmuI ACTGGG 2 cut(s) 230, 893
BpiI GAAGAC 1 cut(s) 951
BplI GAGNNNNNCTC 4 cut(s) 623, 655, 625, 657
BpmI CTGGAG 1 cut(s) 120
BpuEI CTTGAG 2 cut(s) 719, 1430
BpuMI CCSGG 2 cut(s) 482, 690
BsaI GGTCTC 2 cut(s) 699, 1215
BsaJI CCNNGG 3 cut(s) 613, 689, 1627
BsaXI ACNNNNNCTCC 2 cut(s) 1623, 1653
Bsc4I CCNNNNNNNGG 2 cut(s) 242, 1528
Bse1I ACTGG 4 cut(s) 236, 520, 548, 888
Bse3DI GCAATG 1 cut(s) 661
BseBI CCWGG 2 cut(s) 404, 990
BseDI CCNNGG 3 cut(s) 613, 689, 1627
BseGI GGATG 6 cut(s) 209, 331, 1134, 1422, 1462, 1492
BseLI CCNNNNNNNGG 2 cut(s) 242, 1528
BseMI GCAATG 1 cut(s) 661
BseMII CTCAG 5 cut(s) 422, 621, 656, 714, 1515
BseNI ACTGG 4 cut(s) 236, 520, 548, 888
BseSI GKGCMC 1 cut(s) 1494
BseXI GCAGC 5 cut(s) 181, 308, 714, 934, 1419
Bsh1236I CGCG 1 cut(s) 1012
BshFI GGCC 3 cut(s) 280, 913, 1089
BsiHKAI GWGCWC 2 cut(s) 144, 1046
BsiSI CCGG 3 cut(s) 293, 481, 689
BslFI GGGAC 2 cut(s) 293, 497
BslI CCNNNNNNNGG 2 cut(s) 242, 1528
BsmAI GTCTC 5 cut(s) 294, 699, 832, 1069, 1215
BsmBI CGTCTC 1 cut(s) 294
BsmFI GGGAC 2 cut(s) 293, 497
BsnI GGCC 3 cut(s) 280, 913, 1089
Bso31I GGTCTC 2 cut(s) 699, 1215
Bsp1286I GDGCHC 3 cut(s) 144, 1046, 1494
Bsp143I GATC 6 cut(s) 427, 673, 734, 964, 985, 1279
Bsp68I TCGCGA 1 cut(s) 1012
BspACI CCGC 4 cut(s) 1005, 1193, 1286, 1529
BspANI GGCC 3 cut(s) 280, 913, 1089
BspCNI CTCAG 6 cut(s) 4, 421, 622, 655, 715, 1514
BspFNI CGCG 1 cut(s) 1012
BspLI GGNNCC 2 cut(s) 135, 1281
BspPI GGATC 4 cut(s) 435, 980, 1274, 1287
BspQI GCTCTTC 1 cut(s) 1380
BspTI CTTAAG 1 cut(s) 502
BspTNI GGTCTC 2 cut(s) 699, 1215
BsrDI GCAATG 1 cut(s) 661
BsrI ACTGG 4 cut(s) 236, 520, 548, 888
BssECI CCNNGG 3 cut(s) 613, 689, 1627
BssMI GATC 6 cut(s) 427, 673, 734, 964, 985, 1279
BssNAI GTATAC 1 cut(s) 18
BssSI CACGAG 1 cut(s) 1212
BssT1I CCWWGG 1 cut(s) 1627
Bst1107I GTATAC 1 cut(s) 18
Bst2BI CACGAG 1 cut(s) 1212
Bst2UI CCWGG 2 cut(s) 404, 990
Bst4CI ACNGT 3 cut(s) 35, 1165, 1565
Bst6I CTCTTC 3 cut(s) 736, 810, 1380
BstAFI CTTAAG 1 cut(s) 502
BstAPI GCANNNNNTGC 1 cut(s) 660
BstC8I GCNNGC 2 cut(s) 927, 1425
BstDEI CTNAG 8 cut(s) 12, 198, 408, 630, 642, 723, 731, 1501
BstDSI CCRYGG 1 cut(s) 613
BstEII GGTNACC 1 cut(s) 371
BstF5I GGATG 6 cut(s) 209, 331, 1134, 1422, 1462, 1492
BstFNI CGCG 1 cut(s) 1012
BstHHI GCGC 1 cut(s) 331
BstKTI GATC 6 cut(s) 430, 676, 737, 967, 988, 1282
BstMAI GTCTC 5 cut(s) 294, 699, 832, 1069, 1215
BstMBI GATC 6 cut(s) 427, 673, 734, 964, 985, 1279
BstMWI GCNNNNNNNGC 4 cut(s) 125, 660, 919, 1429
BstNI CCWGG 2 cut(s) 404, 990
BstNSI RCATGY 1 cut(s) 929
BstPI GGTNACC 1 cut(s) 371
BstSCI CCNGG 4 cut(s) 402, 480, 688, 988
BstSFI CTRYAG 1 cut(s) 601
BstSLI GKGCMC 1 cut(s) 1494
BstUI CGCG 1 cut(s) 1012
BstV1I GCAGC 5 cut(s) 181, 308, 714, 934, 1419
BstV2I GAAGAC 1 cut(s) 951
BstX2I RGATCY 1 cut(s) 1279
BstXI CCANNNNNNTGG 1 cut(s) 842
BstYI RGATCY 1 cut(s) 1279
BstZ17I GTATAC 1 cut(s) 18
BsuRI GGCC 3 cut(s) 280, 913, 1089
BtgI CCRYGG 1 cut(s) 613
BtsCI GGATG 6 cut(s) 209, 331, 1134, 1422, 1462, 1492
BtsIMutI CAGTG 6 cut(s) 210, 720, 825, 1057, 1570, 1611
BtuMI TCGCGA 1 cut(s) 1012
Cac8I GCNNGC 2 cut(s) 927, 1425
CfoI GCGC 1 cut(s) 331
Cfr13I GGNCC 2 cut(s) 992, 1088
CseI GACGC 1 cut(s) 494
Csp6I GTAC 1 cut(s) 1080
CviAII CATG 9 cut(s) 590, 677, 842, 917, 926, 1154, 1315, 1483, 1619
CviQI GTAC 1 cut(s) 1080
DdeI CTNAG 8 cut(s) 12, 198, 408, 630, 642, 723, 731, 1501
DpnI GATC 6 cut(s) 429, 675, 736, 966, 987, 1281
DpnII GATC 6 cut(s) 427, 673, 734, 964, 985, 1279
DraIII CACNNNGTG 1 cut(s) 157
Eam1104I CTCTTC 3 cut(s) 736, 810, 1380
EarI CTCTTC 3 cut(s) 736, 810, 1380
Eco130I CCWWGG 1 cut(s) 1627
Eco147I AGGCCT 2 cut(s) 280, 913
Eco31I GGTCTC 2 cut(s) 699, 1215
Eco47I GGWCC 1 cut(s) 992
Eco57I CTGAAG 5 cut(s) 167, 791, 963, 1060, 1647
Eco91I GGTNACC 1 cut(s) 371
EcoO65I GGTNACC 1 cut(s) 371
EcoRI GAATTC 1 cut(s) 747
EcoRII CCWGG 2 cut(s) 402, 988
EcoT14I CCWWGG 1 cut(s) 1627
ErhI CCWWGG 1 cut(s) 1627
Esp3I CGTCTC 1 cut(s) 294
FaeI CATG 9 cut(s) 593, 680, 845, 920, 929, 1157, 1318, 1486, 1622
FaqI GGGAC 2 cut(s) 293, 497
FatI CATG 9 cut(s) 589, 676, 841, 916, 925, 1153, 1314, 1482, 1618
FbaI TGATCA 1 cut(s) 673
FblI GTMKAC 3 cut(s) 17, 520, 1571
Fnu4HI GCNGC 6 cut(s) 195, 297, 728, 923, 1287, 1433
FokI GGATG 6 cut(s) 196, 338, 1141, 1429, 1449, 1499
Fsp4HI GCNGC 6 cut(s) 195, 297, 728, 923, 1287, 1433
FspBI CTAG 5 cut(s) 50, 335, 1359, 1473, 1671
FspI TGCGCA 1 cut(s) 330
GlaI GCGC 1 cut(s) 330
GluI GCNGC 6 cut(s) 195, 297, 728, 923, 1287, 1433
GsuI CTGGAG 1 cut(s) 120
HaeIII GGCC 3 cut(s) 280, 913, 1089
HapII CCGG 3 cut(s) 293, 481, 689
HgaI GACGC 1 cut(s) 494
HhaI GCGC 1 cut(s) 331
Hin1II CATG 9 cut(s) 593, 680, 845, 920, 929, 1157, 1318, 1486, 1622
Hin6I GCGC 1 cut(s) 329
HinP1I GCGC 1 cut(s) 329
HincII GTYRAC 1 cut(s) 1255
HindII GTYRAC 1 cut(s) 1255
HindIII AAGCTT 3 cut(s) 869, 1247, 1376
HinfI GANTC 9 cut(s) 39, 148, 306, 380, 462, 625, 947, 1108, 1319
HpaII CCGG 3 cut(s) 293, 481, 689
HphI GGTGA 5 cut(s) 116, 143, 213, 678, 995
Hpy166II GTNNAC 5 cut(s) 18, 31, 521, 1255, 1572
Hpy188I TCNGA 6 cut(s) 13, 645, 954, 972, 1324, 1504
Hpy188III TCNNGA 9 cut(s) 43, 137, 459, 629, 698, 738, 1011, 1105, 1359
Hpy8I GTNNAC 5 cut(s) 18, 31, 521, 1255, 1572
Hpy99I CGWCG 1 cut(s) 277
HpyAV CCTTC 2 cut(s) 234, 809
HpyCH4III ACNGT 3 cut(s) 35, 1165, 1565
HpyCH4V TGCA 7 cut(s) 389, 397, 663, 929, 1435, 1442, 1658
HpyF10VI GCNNNNNNNGC 4 cut(s) 125, 660, 919, 1429
HpyF3I CTNAG 8 cut(s) 12, 198, 408, 630, 642, 723, 731, 1501
Hsp92II CATG 9 cut(s) 593, 680, 845, 920, 929, 1157, 1318, 1486, 1622
HspAI GCGC 1 cut(s) 329
Ksp22I TGATCA 1 cut(s) 673
Kzo9I GATC 6 cut(s) 427, 673, 734, 964, 985, 1279
LguI GCTCTTC 1 cut(s) 1380
LmnI GCTCC 2 cut(s) 139, 259
Lsp1109I GCAGC 5 cut(s) 181, 308, 714, 934, 1419
LweI GCATC 2 cut(s) 218, 316
MaeI CTAG 5 cut(s) 50, 335, 1359, 1473, 1671
MaeIII GTNAC 8 cut(s) 238, 371, 535, 560, 854, 1141, 1349, 1475
MalI GATC 6 cut(s) 429, 675, 736, 966, 987, 1281
MboI GATC 6 cut(s) 427, 673, 734, 964, 985, 1279
MboII GAAGA 9 cut(s) 77, 753, 797, 956, 1067, 1109, 1384, 1397, 1517
MfeI CAATTG 1 cut(s) 759
MflI RGATCY 1 cut(s) 1279
MhlI GDGCHC 3 cut(s) 144, 1046, 1494
MluCI AATT 9 cut(s) 445, 747, 759, 791, 933, 1496, 1510, 1540, 1606
MlyI GAGTC 3 cut(s) 315, 374, 941
MmeI TCCRAC 1 cut(s) 687
MnlI CCTC 7 cut(s) 270, 418, 737, 833, 924, 1407, 1413
MseI TTAA 5 cut(s) 503, 552, 666, 1367, 1635
MspCI CTTAAG 1 cut(s) 502
MspI CCGG 3 cut(s) 293, 481, 689
MspR9I CCNGG 4 cut(s) 404, 482, 690, 990
MunI CAATTG 1 cut(s) 759
MvaI CCWGG 2 cut(s) 404, 990
MvnI CGCG 1 cut(s) 1012
MwoI GCNNNNNNNGC 4 cut(s) 125, 660, 919, 1429
NciI CCSGG 2 cut(s) 482, 690
NdeII GATC 6 cut(s) 427, 673, 734, 964, 985, 1279
NlaIII CATG 9 cut(s) 593, 680, 845, 920, 929, 1157, 1318, 1486, 1622
NlaIV GGNNCC 2 cut(s) 135, 1281
NmuCI GTSAC 3 cut(s) 535, 560, 1349
NruI TCGCGA 1 cut(s) 1012
NsbI TGCGCA 1 cut(s) 330
NspI RCATGY 1 cut(s) 929
PaeI GCATGC 1 cut(s) 929
PceI AGGCCT 2 cut(s) 280, 913
PciSI GCTCTTC 1 cut(s) 1380
PfeI GAWTC 6 cut(s) 39, 148, 462, 625, 1108, 1319
PkrI GCNGC 6 cut(s) 196, 298, 729, 924, 1288, 1434
PleI GAGTC 3 cut(s) 314, 374, 941
PpsI GAGTC 3 cut(s) 314, 374, 941
PshBI ATTAAT 1 cut(s) 666
Psp6I CCWGG 2 cut(s) 402, 988
PspEI GGTNACC 1 cut(s) 371
PspGI CCWGG 2 cut(s) 402, 988
PspN4I GGNNCC 2 cut(s) 135, 1281
PspPI GGNCC 2 cut(s) 992, 1088
PsuI RGATCY 1 cut(s) 1279
RruI TCGCGA 1 cut(s) 1012
RsaI GTAC 1 cut(s) 1081
RsaNI GTAC 1 cut(s) 1080
SapI GCTCTTC 1 cut(s) 1380
SaqAI TTAA 5 cut(s) 503, 552, 666, 1367, 1635
SatI GCNGC 6 cut(s) 195, 297, 728, 923, 1287, 1433
Sau3AI GATC 6 cut(s) 427, 673, 734, 964, 985, 1279
Sau96I GGNCC 2 cut(s) 992, 1088
SchI GAGTC 3 cut(s) 315, 374, 941
ScrFI CCNGG 4 cut(s) 404, 482, 690, 990
SduI GDGCHC 3 cut(s) 144, 1046, 1494
SfaNI GCATC 2 cut(s) 218, 316
SfcI CTRYAG 1 cut(s) 601
SinI GGWCC 1 cut(s) 992
SmlI CTYRAG 3 cut(s) 502, 698, 1409
SmoI CTYRAG 3 cut(s) 502, 698, 1409
SpeI ACTAGT 1 cut(s) 334
SphI GCATGC 1 cut(s) 929
Sse9I AATT 9 cut(s) 445, 747, 759, 791, 933, 1496, 1510, 1540, 1606
SseBI AGGCCT 2 cut(s) 280, 913
SsiI CCGC 4 cut(s) 1005, 1193, 1286, 1529
SspMI CTAG 5 cut(s) 50, 335, 1359, 1473, 1671
StuI AGGCCT 2 cut(s) 280, 913
StyD4I CCNGG 4 cut(s) 402, 480, 688, 988
StyI CCWWGG 1 cut(s) 1627
TaaI ACNGT 3 cut(s) 35, 1165, 1565
TaqI TCGA 3 cut(s) 275, 304, 880
TasI AATT 9 cut(s) 445, 747, 759, 791, 933, 1496, 1510, 1540, 1606
TauI GCSGC 1 cut(s) 1289
TfiI GAWTC 6 cut(s) 39, 148, 462, 625, 1108, 1319
Tru1I TTAA 5 cut(s) 503, 552, 666, 1367, 1635
Tru9I TTAA 5 cut(s) 503, 552, 666, 1367, 1635
TscAI CASTG 6 cut(s) 210, 727, 832, 1057, 1570, 1618
TseFI GTSAC 3 cut(s) 535, 560, 1349
TseI GCWGC 5 cut(s) 194, 296, 727, 922, 1432
Tsp45I GTSAC 3 cut(s) 535, 560, 1349
TspDTI ATGAA 2 cut(s) 1471, 1635
TspGWI ACGGA 2 cut(s) 630, 1141
TspRI CASTG 6 cut(s) 210, 727, 832, 1057, 1570, 1618
Vha464I CTTAAG 1 cut(s) 502
VpaK11BI GGWCC 1 cut(s) 992
VspI ATTAAT 1 cut(s) 666
XapI RAATTY 3 cut(s) 747, 791, 1496
XbaI TCTAGA 1 cut(s) 1358
XceI RCATGY 1 cut(s) 929
XcmI CCANNNNNNNNNTGG 1 cut(s) 318
XmiI GTMKAC 3 cut(s) 17, 520, 1571
XspI CTAG 5 cut(s) 50, 335, 1359, 1473, 1671
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.