Rh2CG504700

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0000498
Physical Location & Seq
Reverse (-)
67673742 .. 67679605
5864 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG504700.1

Sequence Viewer

Length: 1260 bp
ATGGATTTTTCAGAGTCCACAAAAGTAGTGTACAATAGGATCCAGAAGCTAGAGCCTGAAAATGTCTCTAAGATAATTGGCTATCTTCTGTTGCAAGACAATGGGGAGCGTGACATGATCCGGCTGGCTTTCAGCCCCGATAATTTGATCCAGTCTTTGATTAATAAGGCGAAAACCGAGCTATGCAAACATGCAGTGTCGTCTCCAATCTCACCTTCTCAGGTGAACCAAGTGGCTGTCTCGGACCTGCCTTTGCAATTCACTCCCTACTCTCCGAGTTTAACAAGACCGATTTCATGTCCCACAACTCTTGGAGCGGCAAATCCATTCAGTAGGGAGGCCCAAGTGCCTGGTGATCAGCAACCACTGCAAGCTGTAGACTTTATTCCACCAGGGTACTCAGATTCAGCTGCTGAAGATTATTGCCTCCAGAGTCAACAAATGCAGTTTCTGCCAGACTTTTCAAGCAATTTCTGCTATCATGAACCTGCATTGGGTGTGAGGAGTCGAAGGTCTCCGAGCTTGCCTGAGTTTCCTCTTAAGGTTTGCCATTACTTCAGTAAGGGCTTTTGCAAGCATGGAAACAACTGCAGATACTTCCATGGCCACCCCATGCCAGAGAGCTTTTCACAGTTTTTCTGCCCAAATTCAAATGTGCTTCAAAGCGATGACCATGTTGTCTCTCCTGGCTCCCTTGAGAAGCTAGAGTATGAAATAATTGAGCTTCTGAAATCTCGAAGAGGGTTTCCAATATCTATTGCCTCTTTGCCAATGATGTATTATGAGAAATATGGGAGGACTCTTCAGGCCGAAGGGTACCTTACTGAGAGCCAGAGACATGGTAAGGCTGGCTATAGCCTCACAAAGCTTCTTGCTAGATTGAAAAACAGCATTCGTCTCATTGATCGGCCTCATGGACAGCACTCAGTTATATTGGCTGAAGATATTCCAAAATACTTGGAGTATACTGGCGAGAAAACTGAACCTGGTGGAATTATTGCTGGTTCTCGACAGATTTATCTCACTTTTCCAGCTGAGAGTAATTTCACTGAGCAAGATGTTTCCAACTATTTCAACAAATATGGGCCAGTTCAAGATGTGCGCATCCCATGCCAGCAGAAGAGGATGTTTGGGTTTGTCACCTTTCTTTATGCAGACACGGTGAGACATATTTTGTCGAAAGGGAATCCTCATTTTGTATGCGGGGCTCGAGTTCTGGTGAAACCTTACAGGGAGAAGTCTAGGCTTGTTGACAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
OST-HTH RRM_1 zf-CCCH

Protein Analysis

419

Amino Acids

47.43

Weight (kDa)

8.4

Isoelectric Point (pI)

53.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PABC_AtC3H46 PF23182 1 - 61 2.6e-33 AtC3H46 PABC domain
RRM_1 PF00076 348 - 396 9.7e-07 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000498)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G05160 AT2G05160 AT2G05160
fragaria_vesca FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_6g40900 FvH4_6g40900 FvH4_6g40900 FvH4_6g40900 FvH4_6g40900 FvH4_6g40900 FvH4_6g40900
malus_domestica MD03G1188600.v1.1 MD09G1123600.v1.1 MD17G1114400.v1.1
prunus_persica Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1
pyrus_communis pycom03g14150 pycom09g04760 pycom17g10570
rosa_chinensis RchiOBHm_Chr2g0156481 RchiOBHm_Chr5g0042651
rosa_laevigata RLG00000020916 RLG00000034148
rosa_multiflora Rmu_sc0004355.1_g000004 Rmu_sc0005392.1_g000010
rosa_roxburghii Rroxscaffold_1G00037990 Rroxscaffold_2G00093000
rosa_rugosa Rorug02G0453300 Rorug02G0453400 Rorug02G0453500 Rorug02G0453600 Rorug05G0203500 Rorug05G0203500 Rorug05G0203600.1 Rorug05G0203700
rosa_samantha Rh2AG519700 Rh2BG532000 Rh2CG504700 Rh2DG541000 Rh5AG288800 Rh5BG292900 Rh5CG325300 Rh5DG302800
rosa_wichuraiana Rw2G042840 Rw5G026790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 677
Acc16I TGCGCA 1 cut(s) 1103
Acc36I ACCTGC 2 cut(s) 255, 496
Acc65I GGTACC 1 cut(s) 816
AccB1I GGYRCC 1 cut(s) 816
AccBSI CCGCTC 1 cut(s) 317
AccI GTMKAC 2 cut(s) 378, 965
AciI CCGC 2 cut(s) 317, 1203
AclWI GGATC 4 cut(s) 34, 47, 112, 142
AcoI YGGCCR 1 cut(s) 604
AcsI RAATTY 1 cut(s) 646
AcuI CTGAAG 4 cut(s) 435, 541, 788, 960
AfaI GTAC 3 cut(s) 32, 398, 818
AfiI CCNNNNNNNGG 1 cut(s) 494
AflII CTTAAG 1 cut(s) 539
AgsI TTSAA 6 cut(s) 465, 651, 662, 883, 1075, 1094
AjnI CCWGG 4 cut(s) 349, 391, 685, 985
AjuI GAANNNNNNNTTGG 2 cut(s) 199, 231
Alw26I GTCTC 8 cut(s) 70, 207, 244, 519, 685, 829, 902, 1159
AlwI GGATC 4 cut(s) 34, 47, 112, 142
AlwNI CAGNNNCTG 2 cut(s) 413, 451
Ama87I CYCGRG 1 cut(s) 1209
AoxI GGCC 5 cut(s) 339, 604, 807, 908, 1085
ApeKI GCWGC 1 cut(s) 410
ApoI RAATTY 1 cut(s) 646
AseI ATTAAT 1 cut(s) 162
Asp700I GAANNNNTTC 1 cut(s) 945
Asp718I GGTACC 1 cut(s) 816
AspLEI GCGC 1 cut(s) 1104
AspS9I GGNCC 3 cut(s) 244, 340, 1085
AsuHPI GGTGA 6 cut(s) 204, 235, 365, 1132, 1174, 1231
AvaI CYCGRG 1 cut(s) 1209
AvaII GGWCC 1 cut(s) 244
BalI TGGCCA 1 cut(s) 606
BamHI GGATCC 1 cut(s) 39
BanI GGYRCC 1 cut(s) 816
BanII GRGCYC 1 cut(s) 1210
BbvI GCAGC 1 cut(s) 397
BciT130I CCWGG 4 cut(s) 351, 393, 687, 987
BclI TGATCA 1 cut(s) 355
BcoDI GTCTC 8 cut(s) 70, 207, 244, 519, 685, 829, 902, 1159
BfaI CTAG 4 cut(s) 50, 704, 876, 1242
BfmI CTRYAG 3 cut(s) 375, 589, 853
BfrI CTTAAG 1 cut(s) 539
BfuAI ACCTGC 2 cut(s) 255, 496
BisI GCNGC 2 cut(s) 318, 411
BlsI GCNGC 2 cut(s) 319, 412
Bme1390I CCNGG 4 cut(s) 351, 393, 687, 987
Bme18I GGWCC 1 cut(s) 244
BmeT110I CYCGRG 1 cut(s) 1209
BmgT120I GGNCC 3 cut(s) 244, 340, 1085
BmiI GGNNCC 3 cut(s) 41, 691, 818
BmrFI CCNGG 4 cut(s) 351, 393, 687, 987
BmsI GCATC 1 cut(s) 1113
BpmI CTGGAG 1 cut(s) 413
BpuEI CTTGAG 1 cut(s) 716
BsaI GGTCTC 1 cut(s) 519
BsaJI CCNNGG 2 cut(s) 392, 601
Bsc4I CCNNNNNNNGG 1 cut(s) 494
Bse1I ACTGG 3 cut(s) 151, 973, 1088
BseBI CCWGG 4 cut(s) 351, 393, 687, 987
BseDI CCNNGG 2 cut(s) 392, 601
BseGI GGATG 2 cut(s) 1104, 1131
BseLI CCNNNNNNNGG 1 cut(s) 494
BseMII CTCAG 7 cut(s) 233, 414, 519, 816, 939, 1026, 1041
BseNI ACTGG 3 cut(s) 151, 973, 1088
BseRI GAGGAG 1 cut(s) 517
BseXI GCAGC 1 cut(s) 397
BshFI GGCC 5 cut(s) 341, 606, 809, 910, 1087
BshNI GGYRCC 1 cut(s) 816
BsiHKCI CYCGRG 1 cut(s) 1209
BsiSI CCGG 1 cut(s) 121
BslFI GGGAC 1 cut(s) 285
BslI CCNNNNNNNGG 1 cut(s) 494
BsmAI GTCTC 8 cut(s) 70, 207, 244, 519, 685, 829, 902, 1159
BsmBI CGTCTC 2 cut(s) 207, 902
BsmFI GGGAC 1 cut(s) 285
BsmI GAATGC 1 cut(s) 891
BsnI GGCC 5 cut(s) 341, 606, 809, 910, 1087
Bso31I GGTCTC 1 cut(s) 519
BsoBI CYCGRG 1 cut(s) 1209
Bsp1286I GDGCHC 1 cut(s) 1210
Bsp1407I TGTACA 1 cut(s) 30
Bsp143I GATC 5 cut(s) 39, 117, 147, 355, 904
Bsp19I CCATGG 1 cut(s) 601
BspACI CCGC 2 cut(s) 317, 1203
BspANI GGCC 5 cut(s) 341, 606, 809, 910, 1087
BspCNI CTCAG 7 cut(s) 232, 413, 520, 817, 938, 1027, 1042
BspHI TCATGA 1 cut(s) 481
BspLI GGNNCC 3 cut(s) 41, 691, 818
BspMAI CTGCAG 1 cut(s) 593
BspMI ACCTGC 2 cut(s) 255, 496
BspPI GGATC 4 cut(s) 34, 47, 112, 142
BspT107I GGYRCC 1 cut(s) 816
BspTI CTTAAG 1 cut(s) 539
BspTNI GGTCTC 1 cut(s) 519
BsrBI CCGCTC 1 cut(s) 317
BsrGI TGTACA 1 cut(s) 30
BsrI ACTGG 3 cut(s) 151, 973, 1088
BssECI CCNNGG 2 cut(s) 392, 601
BssMI GATC 5 cut(s) 39, 117, 147, 355, 904
BssNAI GTATAC 1 cut(s) 966
BssT1I CCWWGG 1 cut(s) 601
Bst1107I GTATAC 1 cut(s) 966
Bst2UI CCWGG 4 cut(s) 351, 393, 687, 987
Bst4CI ACNGT 2 cut(s) 633, 1162
Bst6I CTCTTC 3 cut(s) 733, 807, 1115
BstAFI CTTAAG 1 cut(s) 539
BstAPI GCANNNNNTGC 4 cut(s) 367, 451, 474, 1110
BstAUI TGTACA 1 cut(s) 30
BstC8I GCNNGC 6 cut(s) 126, 372, 524, 575, 850, 1115
BstDEI CTNAG 8 cut(s) 69, 219, 400, 528, 825, 925, 1035, 1050
BstDSI CCRYGG 1 cut(s) 601
BstF5I GGATG 2 cut(s) 1104, 1131
BstHHI GCGC 1 cut(s) 1104
BstKTI GATC 5 cut(s) 42, 120, 150, 358, 907
BstMAI GTCTC 8 cut(s) 70, 207, 244, 519, 685, 829, 902, 1159
BstMBI GATC 5 cut(s) 39, 117, 147, 355, 904
BstMWI GCNNNNNNNGC 4 cut(s) 367, 451, 474, 1110
BstNI CCWGG 4 cut(s) 351, 393, 687, 987
BstNSI RCATGY 1 cut(s) 194
BstSCI CCNGG 4 cut(s) 349, 391, 685, 985
BstSFI CTRYAG 3 cut(s) 375, 589, 853
BstV1I GCAGC 1 cut(s) 397
BstX2I RGATCY 1 cut(s) 39
BstXI CCANNNNNNTGG 2 cut(s) 350, 839
BstYI RGATCY 1 cut(s) 39
BstZ17I GTATAC 1 cut(s) 966
BsuRI GGCC 5 cut(s) 341, 606, 809, 910, 1087
BtgI CCRYGG 1 cut(s) 601
BtgZI GCGATG 1 cut(s) 681
BtsCI GGATG 2 cut(s) 1104, 1131
BtsI GCAGTG 2 cut(s) 201, 365
BtsIMutI CAGTG 3 cut(s) 201, 365, 1047
BveI ACCTGC 2 cut(s) 255, 496
Cac8I GCNNGC 6 cut(s) 126, 372, 524, 575, 850, 1115
CaiI CAGNNNCTG 2 cut(s) 413, 451
CciI TCATGA 1 cut(s) 481
CfoI GCGC 1 cut(s) 1104
Cfr13I GGNCC 3 cut(s) 244, 340, 1085
CsiI ACCWGGT 1 cut(s) 985
Csp6I GTAC 3 cut(s) 31, 397, 817
CspCI CAANNNNNGTGG 2 cut(s) 292, 327
CviQI GTAC 3 cut(s) 31, 397, 817
DdeI CTNAG 8 cut(s) 69, 219, 400, 528, 825, 925, 1035, 1050
DpnI GATC 5 cut(s) 41, 119, 149, 357, 906
DpnII GATC 5 cut(s) 39, 117, 147, 355, 904
DrdI GACNNNNNNGTC 1 cut(s) 677
DseDI GACNNNNNNGTC 1 cut(s) 677
EaeI YGGCCR 1 cut(s) 604
Eam1104I CTCTTC 3 cut(s) 733, 807, 1115
EarI CTCTTC 3 cut(s) 733, 807, 1115
Eco130I CCWWGG 1 cut(s) 601
Eco24I GRGCYC 1 cut(s) 1210
Eco31I GGTCTC 1 cut(s) 519
Eco47I GGWCC 1 cut(s) 244
Eco57I CTGAAG 4 cut(s) 435, 541, 788, 960
Eco88I CYCGRG 1 cut(s) 1209
EcoRII CCWGG 4 cut(s) 349, 391, 685, 985
EcoT14I CCWWGG 1 cut(s) 601
EcoT38I GRGCYC 1 cut(s) 1210
ErhI CCWWGG 1 cut(s) 601
Esp3I CGTCTC 2 cut(s) 207, 902
FalI AAGNNNNNCTT 2 cut(s) 804, 836
FaqI GGGAC 1 cut(s) 285
FauI CCCGC 1 cut(s) 1196
FbaI TGATCA 1 cut(s) 355
FblI GTMKAC 2 cut(s) 378, 965
Fnu4HI GCNGC 2 cut(s) 318, 411
FokI GGATG 2 cut(s) 1091, 1138
FriOI GRGCYC 1 cut(s) 1210
Fsp4HI GCNGC 2 cut(s) 318, 411
FspAI RTGCGCAY 1 cut(s) 1103
FspBI CTAG 4 cut(s) 50, 704, 876, 1242
FspI TGCGCA 1 cut(s) 1103
GlaI GCGC 1 cut(s) 1103
GluI GCNGC 2 cut(s) 318, 411
GsuI CTGGAG 1 cut(s) 413
HaeIII GGCC 5 cut(s) 341, 606, 809, 910, 1087
HapII CCGG 1 cut(s) 121
HhaI GCGC 1 cut(s) 1104
Hin6I GCGC 1 cut(s) 1102
HinP1I GCGC 1 cut(s) 1102
HincII GTYRAC 2 cut(s) 437, 1252
HindII GTYRAC 2 cut(s) 437, 1252
HindIII AAGCTT 1 cut(s) 866
HinfI GANTC 6 cut(s) 14, 404, 433, 505, 799, 1186
HpaII CCGG 1 cut(s) 121
HphI GGTGA 6 cut(s) 204, 235, 365, 1132, 1174, 1231
Hpy166II GTNNAC 7 cut(s) 18, 31, 226, 379, 437, 966, 1252
Hpy188I TCNGA 6 cut(s) 13, 244, 276, 403, 519, 729
Hpy188III TCNNGA 6 cut(s) 43, 430, 482, 735, 1008, 1094
Hpy8I GTNNAC 7 cut(s) 18, 31, 226, 379, 437, 966, 1252
HpyAV CCTTC 3 cut(s) 225, 504, 806
HpyCH4III ACNGT 2 cut(s) 633, 1162
HpyF10VI GCNNNNNNNGC 4 cut(s) 367, 451, 474, 1110
HpyF3I CTNAG 8 cut(s) 69, 219, 400, 528, 825, 925, 1035, 1050
HspAI GCGC 1 cut(s) 1102
KpnI GGTACC 1 cut(s) 820
Ksp22I TGATCA 1 cut(s) 355
Kzo9I GATC 5 cut(s) 39, 117, 147, 355, 904
LmnI GCTCC 3 cut(s) 106, 314, 695
Lsp1109I GCAGC 1 cut(s) 397
LweI GCATC 1 cut(s) 1113
MabI ACCWGGT 1 cut(s) 985
MaeI CTAG 4 cut(s) 50, 704, 876, 1242
MaeIII GTNAC 2 cut(s) 110, 1138
MalI GATC 5 cut(s) 41, 119, 149, 357, 906
MbiI CCGCTC 1 cut(s) 317
MboI GATC 5 cut(s) 39, 117, 147, 355, 904
MboII GAAGA 6 cut(s) 77, 428, 750, 794, 953, 1132
MflI RGATCY 1 cut(s) 39
MhlI GDGCHC 1 cut(s) 1210
MlsI TGGCCA 1 cut(s) 606
MluCI AATT 8 cut(s) 75, 142, 257, 469, 646, 717, 993, 1042
MluNI TGGCCA 1 cut(s) 606
MlyI GAGTC 4 cut(s) 23, 442, 514, 793
MmeI TCCRAC 1 cut(s) 1089
Mox20I TGGCCA 1 cut(s) 606
MroXI GAANNNNTTC 1 cut(s) 945
MscI TGGCCA 1 cut(s) 606
MseI TTAA 3 cut(s) 162, 281, 540
Msp20I TGGCCA 1 cut(s) 606
MspA1I CMGCKG 2 cut(s) 410, 1034
MspCI CTTAAG 1 cut(s) 539
MspI CCGG 1 cut(s) 121
MspR9I CCNGG 4 cut(s) 351, 393, 687, 987
Mva1269I GAATGC 1 cut(s) 891
MvaI CCWGG 4 cut(s) 351, 393, 687, 987
MwoI GCNNNNNNNGC 4 cut(s) 367, 451, 474, 1110
NcoI CCATGG 1 cut(s) 601
NdeII GATC 5 cut(s) 39, 117, 147, 355, 904
NlaIV GGNNCC 3 cut(s) 41, 691, 818
NmuCI GTSAC 2 cut(s) 110, 1138
NsbI TGCGCA 1 cut(s) 1103
NspI RCATGY 1 cut(s) 194
PaeR7I CTCGAG 1 cut(s) 1209
PagI TCATGA 1 cut(s) 481
PctI GAATGC 1 cut(s) 891
PdmI GAANNNNTTC 1 cut(s) 945
PfeI GAWTC 2 cut(s) 404, 1186
PkrI GCNGC 2 cut(s) 319, 412
PleI GAGTC 4 cut(s) 22, 441, 513, 793
PpsI GAGTC 4 cut(s) 22, 441, 513, 793
PshBI ATTAAT 1 cut(s) 162
Psp6I CCWGG 4 cut(s) 349, 391, 685, 985
PspGI CCWGG 4 cut(s) 349, 391, 685, 985
PspN4I GGNNCC 3 cut(s) 41, 691, 818
PspPI GGNCC 3 cut(s) 244, 340, 1085
PspXI VCTCGAGB 1 cut(s) 1209
PstI CTGCAG 1 cut(s) 593
PstNI CAGNNNCTG 2 cut(s) 413, 451
PsuI RGATCY 1 cut(s) 39
PvuII CAGCTG 2 cut(s) 410, 1034
RsaI GTAC 3 cut(s) 32, 398, 818
RsaNI GTAC 3 cut(s) 31, 397, 817
SaqAI TTAA 3 cut(s) 162, 281, 540
SatI GCNGC 2 cut(s) 318, 411
Sau3AI GATC 5 cut(s) 39, 117, 147, 355, 904
Sau96I GGNCC 3 cut(s) 244, 340, 1085
SchI GAGTC 4 cut(s) 23, 442, 514, 793
ScrFI CCNGG 4 cut(s) 351, 393, 687, 987
SduI GDGCHC 1 cut(s) 1210
SexAI ACCWGGT 1 cut(s) 985
SfaNI GCATC 1 cut(s) 1113
SfcI CTRYAG 3 cut(s) 375, 589, 853
Sfr274I CTCGAG 1 cut(s) 1209
SinI GGWCC 1 cut(s) 244
SlaI CTCGAG 1 cut(s) 1209
SmlI CTYRAG 3 cut(s) 539, 695, 1209
SmoI CTYRAG 3 cut(s) 539, 695, 1209
Sse9I AATT 8 cut(s) 75, 142, 257, 469, 646, 717, 993, 1042
SsiI CCGC 2 cut(s) 317, 1203
SspMI CTAG 4 cut(s) 50, 704, 876, 1242
StyD4I CCNGG 4 cut(s) 349, 391, 685, 985
StyI CCWWGG 1 cut(s) 601
TaaI ACNGT 2 cut(s) 633, 1162
TaqI TCGA 5 cut(s) 508, 736, 1009, 1178, 1210
TaqII GACCGA 1 cut(s) 304
TasI AATT 8 cut(s) 75, 142, 257, 469, 646, 717, 993, 1042
TatI WGTACW 1 cut(s) 30
TauI GCSGC 1 cut(s) 320
TfiI GAWTC 2 cut(s) 404, 1186
Tru1I TTAA 3 cut(s) 162, 281, 540
Tru9I TTAA 3 cut(s) 162, 281, 540
TscAI CASTG 3 cut(s) 201, 372, 1054
TseFI GTSAC 2 cut(s) 110, 1138
TseI GCWGC 1 cut(s) 410
Tsp45I GTSAC 2 cut(s) 110, 1138
TspDTI ATGAA 3 cut(s) 285, 498, 726
TspRI CASTG 3 cut(s) 201, 372, 1054
Vha464I CTTAAG 1 cut(s) 539
VpaK11BI GGWCC 1 cut(s) 244
VspI ATTAAT 1 cut(s) 162
XapI RAATTY 1 cut(s) 646
XceI RCATGY 1 cut(s) 194
XhoI CTCGAG 1 cut(s) 1209
XmiI GTMKAC 2 cut(s) 378, 965
XmnI GAANNNNTTC 1 cut(s) 945
XspI CTAG 4 cut(s) 50, 704, 876, 1242
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.