Rroxscaffold_1G00037990

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000498
Physical Location & Seq
Forward (+)
55323070 .. 55327471
4402 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00037990.1

Sequence Viewer

Length: 1347 bp
ATGGATTTCATGCCATTCGGATTCTCCGATTCTACTGAGGAACTGCAAAACCAGGCTCGATTTTTGAGTTTTGAGGATCAAATGGAACCACTCAATTCCGGGATTTCAGGATACCCTGATGAGTACTATTATCGGGATGCTACACTCGGGGGAAGCTTAAGTCCTAGACAAGGTAGACGATTTTCAAGTCTAGAGTTTCCCATTAAGATTTGTCACTACTTCAGTAAGGGCTTTTGTAAGCATGGAAGCAGCTGTCGGTATTACCATGGACAAGTGATTCCTGAGAGCTTCTCTCAGATGTATGGGAATGATGGCATTATTGATGATCATGTTATCTCGCCCATGTCTCTTGAGAAGTTGGAGTGGGAAATCGTCGAGCTGCTTAGATCAAGAAGGGGGACTCCTATTTCAATTGCTTCTCTGCCAATGATGTATTATGAGAAATATGGAAAATCTCTTCAAGCAGAAGGCTACCTCACCGAAAGCCAGAGACATGGGAAAGCTGGTTATAGTTTGACAAAGCTTCTTGCTCGGCTTGGAAGCAGTATACGGCTGATTGACAGGCCTCATGGGCAGCATGCAATAATTTTGGCAGAAGACTCATTAAAATACATGGACCATCGGAATGAGAGAGGCGATCCTGGTCCAATTGTTAGTGGTTCTCGGCAAATATATTTAACATTTCCGGCTGACAGCACCTTTAGTGAAGATGATGTGTCCAACTACTTCAACACCTTTGGCCCTGTTGAAGATGTAAGGATTCCCTGTCAACCGAAAAGGATGTTTGGGTTTGTAACCTTTGTTAATGCAGACACTGTGACAATGATTTTGTCAAAAGGAAATCCTCATTTTGTTTGTGGGGCTCGTGTTCTTGTGAAACCTTACAGGGAAAAATCAAAGCTTGCTGAAAGAAAGTACCAAGAGAGAATGGAGCCAGCTGATCATTATTCTCCACACTACTCAGATATGGAACCCGAGTTTCATTCGATGTCAAGATGGTGTCATAATTCTAGATTCCTGCAAAAGAAGCTGCTGGAAGAGCAAGAATTTGCACTTGAACTTGAGAGGAGTAGGCTGGCTGAGCTGCATTTTATGCAAAAGCCAGTTGCAAATCAGCCCTATTCTGGTTACTTAATGGATGGGCGAAAAGTCTCGGAAGATAATTTCAACGTCCCGCCTGCAGAATGTTTTGATTATCTGTTAGATGTTATAAACAATGGGTCCACAAGTGATGATAAACCCAAACATACGGGCACCAACTACACTGAGCAAGAGAGTCAAGGACTTAATCTCCCAGATAGCCCATTTGCAACTTCAATAGCTAGTGGCATTTCAGCTGTCATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
OST-HTH RRM_1 zf-CCCH

Protein Analysis

448

Amino Acids

51.12

Weight (kDa)

5.71

Isoelectric Point (pI)

50.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 234 - 281 2.8e-06 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000498)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G05160 AT2G05160 AT2G05160
fragaria_vesca FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_6g40900 FvH4_6g40900 FvH4_6g40900 FvH4_6g40900 FvH4_6g40900 FvH4_6g40900 FvH4_6g40900
malus_domestica MD03G1188600.v1.1 MD09G1123600.v1.1 MD17G1114400.v1.1
prunus_persica Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1
pyrus_communis pycom03g14150 pycom09g04760 pycom17g10570
rosa_chinensis RchiOBHm_Chr2g0156481 RchiOBHm_Chr5g0042651
rosa_laevigata RLG00000020916 RLG00000034148
rosa_multiflora Rmu_sc0004355.1_g000004 Rmu_sc0005392.1_g000010
rosa_roxburghii Rroxscaffold_1G00037990 Rroxscaffold_2G00093000
rosa_rugosa Rorug02G0453300 Rorug02G0453400 Rorug02G0453500 Rorug02G0453600 Rorug05G0203500 Rorug05G0203500 Rorug05G0203600.1 Rorug05G0203700
rosa_samantha Rh2AG519700 Rh2BG532000 Rh2CG504700 Rh2DG541000 Rh5AG288800 Rh5BG292900 Rh5CG325300 Rh5DG302800
rosa_wichuraiana Rw2G042840 Rw5G026790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1211
AccB1I GGYRCC 1 cut(s) 1253
AccI GTMKAC 2 cut(s) 175, 547
AciI CCGC 1 cut(s) 1175
AclWI GGATC 2 cut(s) 84, 632
AcsI RAATTY 1 cut(s) 1046
AcuI CTGAAG 1 cut(s) 205
AfaI GTAC 2 cut(s) 125, 917
AfiI CCNNNNNNNGG 2 cut(s) 170, 1124
AflII CTTAAG 1 cut(s) 157
AgsI TTSAA 8 cut(s) 186, 411, 461, 730, 749, 1058, 1168, 1317
AjnI CCWGG 2 cut(s) 51, 640
Alw26I GTCTC 3 cut(s) 351, 484, 1156
AlwI GGATC 2 cut(s) 84, 632
AlwNI CAGNNNCTG 1 cut(s) 815
Ama87I CYCGRG 2 cut(s) 146, 974
AoxI GGCC 2 cut(s) 563, 739
ApeKI GCWGC 5 cut(s) 249, 379, 574, 1030, 1084
ApoI RAATTY 1 cut(s) 1046
ArsI GACNNNNNNTTYG 2 cut(s) 811, 843
AspS9I GGNCC 4 cut(s) 616, 644, 740, 1221
AsuC2I CCSGG 1 cut(s) 100
AsuHPI GGTGA 1 cut(s) 469
AvaI CYCGRG 2 cut(s) 146, 974
AvaII GGWCC 3 cut(s) 616, 644, 1221
BaeGI GKGCMC 1 cut(s) 1256
BanI GGYRCC 1 cut(s) 1253
BanII GRGCYC 1 cut(s) 865
BauI CACGAG 1 cut(s) 864
BbsI GAAGAC 1 cut(s) 603
BbvI GCAGC 5 cut(s) 261, 366, 586, 1017, 1071
BccI CCATC 4 cut(s) 305, 627, 990, 1133
BceAI ACGGC 1 cut(s) 566
BciT130I CCWGG 2 cut(s) 53, 642
BciVI GTATCC 1 cut(s) 104
BclI TGATCA 2 cut(s) 325, 940
BcnI CCSGG 1 cut(s) 100
BcoDI GTCTC 3 cut(s) 351, 484, 1156
BfaI CTAG 4 cut(s) 165, 191, 1011, 1323
BfmI CTRYAG 1 cut(s) 1179
BfrI CTTAAG 1 cut(s) 157
BfuI GTATCC 1 cut(s) 104
BglI GCCNNNNNGGC 1 cut(s) 571
BisI GCNGC 5 cut(s) 250, 380, 575, 1031, 1085
BlpI GCTNAGC 1 cut(s) 1080
BlsI GCNGC 5 cut(s) 251, 381, 576, 1032, 1086
BmcAI AGTACT 1 cut(s) 125
Bme1390I CCNGG 3 cut(s) 53, 100, 642
Bme18I GGWCC 3 cut(s) 616, 644, 1221
BmeT110I CYCGRG 2 cut(s) 146, 974
BmgT120I GGNCC 4 cut(s) 616, 644, 740, 1221
BmiI GGNNCC 5 cut(s) 87, 933, 972, 1222, 1255
BmrFI CCNGG 3 cut(s) 53, 100, 642
BmsI GCATC 1 cut(s) 127
BpiI GAAGAC 1 cut(s) 603
BplI GAGNNNNNCTC 4 cut(s) 275, 307, 277, 309
Bpu1102I GCTNAGC 1 cut(s) 1080
BpuEI CTTGAG 2 cut(s) 371, 1082
BpuMI CCSGG 1 cut(s) 100
BsaJI CCNNGG 1 cut(s) 265
BsaXI ACNNNNNCTCC 2 cut(s) 1275, 1305
Bsc4I CCNNNNNNNGG 2 cut(s) 170, 1124
Bse1I ACTGG 1 cut(s) 1103
BseBI CCWGG 2 cut(s) 53, 642
BseDI CCNNGG 1 cut(s) 265
BseGI GGATG 3 cut(s) 142, 786, 1144
BseLI CCNNNNNNNGG 2 cut(s) 170, 1124
BseMII CTCAG 6 cut(s) 27, 273, 308, 975, 1071, 1257
BseNI ACTGG 1 cut(s) 1103
BseRI GAGGAG 1 cut(s) 1081
BseSI GKGCMC 1 cut(s) 1256
BseXI GCAGC 5 cut(s) 261, 366, 586, 1017, 1071
BshFI GGCC 2 cut(s) 565, 741
BshNI GGYRCC 1 cut(s) 1253
BsiHKCI CYCGRG 2 cut(s) 146, 974
BsiSI CCGG 2 cut(s) 99, 686
BslFI GGGAC 2 cut(s) 412, 1157
BslI CCNNNNNNNGG 2 cut(s) 170, 1124
BsmAI GTCTC 3 cut(s) 351, 484, 1156
BsmFI GGGAC 2 cut(s) 412, 1157
BsnI GGCC 2 cut(s) 565, 741
BsoBI CYCGRG 2 cut(s) 146, 974
Bsp1286I GDGCHC 2 cut(s) 865, 1256
Bsp143I GATC 5 cut(s) 76, 325, 386, 637, 940
Bsp1720I GCTNAGC 1 cut(s) 1080
Bsp19I CCATGG 1 cut(s) 265
BspACI CCGC 1 cut(s) 1175
BspANI GGCC 2 cut(s) 565, 741
BspCNI CTCAG 6 cut(s) 28, 274, 307, 974, 1072, 1258
BspLI GGNNCC 5 cut(s) 87, 933, 972, 1222, 1255
BspMAI CTGCAG 1 cut(s) 1183
BspPI GGATC 2 cut(s) 84, 632
BspQI GCTCTTC 1 cut(s) 1032
BspT107I GGYRCC 1 cut(s) 1253
BspTI CTTAAG 1 cut(s) 157
BsrI ACTGG 1 cut(s) 1103
BssECI CCNNGG 1 cut(s) 265
BssMI GATC 5 cut(s) 76, 325, 386, 637, 940
BssNAI GTATAC 1 cut(s) 548
BssSI CACGAG 1 cut(s) 864
BssT1I CCWWGG 1 cut(s) 265
Bst1107I GTATAC 1 cut(s) 548
Bst2BI CACGAG 1 cut(s) 864
Bst2UI CCWGG 2 cut(s) 53, 642
Bst4CI ACNGT 1 cut(s) 817
Bst6I CTCTTC 2 cut(s) 462, 1032
BstAFI CTTAAG 1 cut(s) 157
BstAPI GCANNNNNTGC 1 cut(s) 1093
BstC8I GCNNGC 5 cut(s) 579, 903, 936, 1077, 1179
BstDEI CTNAG 7 cut(s) 36, 282, 294, 383, 961, 1080, 1266
BstDSI CCRYGG 1 cut(s) 265
BstENI CCTNNNNNAGG 1 cut(s) 168
BstF5I GGATG 3 cut(s) 142, 786, 1144
BstKTI GATC 5 cut(s) 79, 328, 389, 640, 943
BstMAI GTCTC 3 cut(s) 351, 484, 1156
BstMBI GATC 5 cut(s) 76, 325, 386, 637, 940
BstMWI GCNNNNNNNGC 5 cut(s) 571, 1027, 1039, 1081, 1093
BstNI CCWGG 2 cut(s) 53, 642
BstNSI RCATGY 1 cut(s) 581
BstSCI CCNGG 3 cut(s) 51, 98, 640
BstSFI CTRYAG 1 cut(s) 1179
BstSLI GKGCMC 1 cut(s) 1256
BstV1I GCAGC 5 cut(s) 261, 366, 586, 1017, 1071
BstV2I GAAGAC 1 cut(s) 603
BstXI CCANNNNNNTGG 1 cut(s) 494
BstZ17I GTATAC 1 cut(s) 548
BsuI GTATCC 1 cut(s) 104
BsuRI GGCC 2 cut(s) 565, 741
BtgI CCRYGG 1 cut(s) 265
BtsCI GGATG 3 cut(s) 142, 786, 1144
BtsIMutI CAGTG 2 cut(s) 813, 1263
Cac8I GCNNGC 5 cut(s) 579, 903, 936, 1077, 1179
CaiI CAGNNNCTG 1 cut(s) 815
Cfr13I GGNCC 4 cut(s) 616, 644, 740, 1221
Csp6I GTAC 2 cut(s) 124, 916
CviAII CATG 9 cut(s) 10, 242, 266, 329, 343, 494, 569, 578, 613
CviQI GTAC 2 cut(s) 124, 916
DdeI CTNAG 7 cut(s) 36, 282, 294, 383, 961, 1080, 1266
DpnI GATC 5 cut(s) 78, 327, 388, 639, 942
DpnII GATC 5 cut(s) 76, 325, 386, 637, 940
Eam1104I CTCTTC 2 cut(s) 462, 1032
EarI CTCTTC 2 cut(s) 462, 1032
Eco130I CCWWGG 1 cut(s) 265
Eco147I AGGCCT 1 cut(s) 565
Eco24I GRGCYC 1 cut(s) 865
Eco47I GGWCC 3 cut(s) 616, 644, 1221
Eco57I CTGAAG 1 cut(s) 205
Eco88I CYCGRG 2 cut(s) 146, 974
EcoNI CCTNNNNNAGG 1 cut(s) 168
EcoRII CCWGG 2 cut(s) 51, 640
EcoT14I CCWWGG 1 cut(s) 265
EcoT38I GRGCYC 1 cut(s) 865
ErhI CCWWGG 1 cut(s) 265
FaeI CATG 9 cut(s) 13, 245, 269, 332, 346, 497, 572, 581, 616
FaqI GGGAC 2 cut(s) 412, 1157
FatI CATG 9 cut(s) 9, 241, 265, 328, 342, 493, 568, 577, 612
FauI CCCGC 1 cut(s) 1182
FbaI TGATCA 2 cut(s) 325, 940
FblI GTMKAC 2 cut(s) 175, 547
Fnu4HI GCNGC 5 cut(s) 250, 380, 575, 1031, 1085
FokI GGATG 3 cut(s) 149, 793, 1151
FriOI GRGCYC 1 cut(s) 865
Fsp4HI GCNGC 5 cut(s) 250, 380, 575, 1031, 1085
FspBI CTAG 4 cut(s) 165, 191, 1011, 1323
GluI GCNGC 5 cut(s) 250, 380, 575, 1031, 1085
HaeIII GGCC 2 cut(s) 565, 741
HapII CCGG 2 cut(s) 99, 686
Hin1II CATG 9 cut(s) 13, 245, 269, 332, 346, 497, 572, 581, 616
HincII GTYRAC 1 cut(s) 770
HindII GTYRAC 1 cut(s) 770
HindIII AAGCTT 3 cut(s) 154, 521, 899
HinfI GANTC 8 cut(s) 21, 29, 277, 400, 599, 760, 1014, 1276
HpaII CCGG 2 cut(s) 99, 686
HphI GGTGA 1 cut(s) 469
Hpy166II GTNNAC 4 cut(s) 176, 548, 770, 1224
Hpy188I TCNGA 6 cut(s) 20, 28, 297, 624, 964, 1156
Hpy188III TCNNGA 8 cut(s) 108, 134, 191, 281, 350, 390, 993, 1011
Hpy8I GTNNAC 4 cut(s) 176, 548, 770, 1224
Hpy99I CGWCG 1 cut(s) 377
HpyAV CCTTC 2 cut(s) 387, 461
HpyCH4III ACNGT 1 cut(s) 817
HpyCH4IV ACGT 1 cut(s) 1170
HpyF10VI GCNNNNNNNGC 5 cut(s) 571, 1027, 1039, 1081, 1093
HpyF3I CTNAG 7 cut(s) 36, 282, 294, 383, 961, 1080, 1266
HpySE526I ACGT 1 cut(s) 1170
Hsp92II CATG 9 cut(s) 13, 245, 269, 332, 346, 497, 572, 581, 616
Ksp22I TGATCA 2 cut(s) 325, 940
Kzo9I GATC 5 cut(s) 76, 325, 386, 637, 940
LguI GCTCTTC 1 cut(s) 1032
LmnI GCTCC 1 cut(s) 931
Lsp1109I GCAGC 5 cut(s) 261, 366, 586, 1017, 1071
LweI GCATC 1 cut(s) 127
MaeI CTAG 4 cut(s) 165, 191, 1011, 1323
MaeII ACGT 1 cut(s) 1170
MaeIII GTNAC 4 cut(s) 212, 793, 817, 1127
MalI GATC 5 cut(s) 78, 327, 388, 639, 942
MboI GATC 5 cut(s) 76, 325, 386, 637, 940
MboII GAAGA 6 cut(s) 449, 608, 719, 761, 1049, 1169
MfeI CAATTG 2 cut(s) 411, 648
MhlI GDGCHC 2 cut(s) 865, 1256
MluCI AATT 7 cut(s) 94, 411, 585, 648, 1006, 1046, 1162
MlyI GAGTC 3 cut(s) 394, 593, 1285
MmeI TCCRAC 2 cut(s) 339, 744
MnlI CCTC 7 cut(s) 31, 67, 485, 576, 626, 855, 1059
MseI TTAA 7 cut(s) 158, 204, 605, 677, 804, 1133, 1287
MslI CAYNNNNRTG 1 cut(s) 624
MspA1I CMGCKG 3 cut(s) 252, 938, 1337
MspCI CTTAAG 1 cut(s) 157
MspI CCGG 2 cut(s) 99, 686
MspR9I CCNGG 3 cut(s) 53, 100, 642
MunI CAATTG 2 cut(s) 411, 648
MvaI CCWGG 2 cut(s) 53, 642
MwoI GCNNNNNNNGC 5 cut(s) 571, 1027, 1039, 1081, 1093
NciI CCSGG 1 cut(s) 100
NcoI CCATGG 1 cut(s) 265
NdeII GATC 5 cut(s) 76, 325, 386, 637, 940
NlaIII CATG 9 cut(s) 13, 245, 269, 332, 346, 497, 572, 581, 616
NlaIV GGNNCC 5 cut(s) 87, 933, 972, 1222, 1255
NmeAIII GCCGAG 2 cut(s) 511, 643
NmuCI GTSAC 2 cut(s) 212, 817
NspI RCATGY 1 cut(s) 581
PaeI GCATGC 1 cut(s) 581
PceI AGGCCT 1 cut(s) 565
PciSI GCTCTTC 1 cut(s) 1032
PcsI WCGNNNNNNNCGW 1 cut(s) 24
PfeI GAWTC 5 cut(s) 21, 29, 277, 760, 1014
PfoI TCCNGGA 1 cut(s) 98
PkrI GCNGC 5 cut(s) 251, 381, 576, 1032, 1086
PleI GAGTC 3 cut(s) 394, 593, 1284
PpsI GAGTC 3 cut(s) 394, 593, 1284
PsiI TTATAA 1 cut(s) 1211
Psp6I CCWGG 2 cut(s) 51, 640
PspGI CCWGG 2 cut(s) 51, 640
PspN4I GGNNCC 5 cut(s) 87, 933, 972, 1222, 1255
PspPI GGNCC 4 cut(s) 616, 644, 740, 1221
PstI CTGCAG 1 cut(s) 1183
PstNI CAGNNNCTG 1 cut(s) 815
PvuII CAGCTG 3 cut(s) 252, 938, 1337
RsaI GTAC 2 cut(s) 125, 917
RsaNI GTAC 2 cut(s) 124, 916
RseI CAYNNNNRTG 1 cut(s) 624
SapI GCTCTTC 1 cut(s) 1032
SaqAI TTAA 7 cut(s) 158, 204, 605, 677, 804, 1133, 1287
SatI GCNGC 5 cut(s) 250, 380, 575, 1031, 1085
Sau3AI GATC 5 cut(s) 76, 325, 386, 637, 940
Sau96I GGNCC 4 cut(s) 616, 644, 740, 1221
ScaI AGTACT 1 cut(s) 125
SchI GAGTC 3 cut(s) 394, 593, 1285
ScrFI CCNGG 3 cut(s) 53, 100, 642
SduI GDGCHC 2 cut(s) 865, 1256
SfaNI GCATC 1 cut(s) 127
SfcI CTRYAG 1 cut(s) 1179
SinI GGWCC 3 cut(s) 616, 644, 1221
SmiMI CAYNNNNRTG 1 cut(s) 624
SmlI CTYRAG 3 cut(s) 157, 350, 1061
SmoI CTYRAG 3 cut(s) 157, 350, 1061
SphI GCATGC 1 cut(s) 581
Sse9I AATT 7 cut(s) 94, 411, 585, 648, 1006, 1046, 1162
SseBI AGGCCT 1 cut(s) 565
SsiI CCGC 1 cut(s) 1175
SspMI CTAG 4 cut(s) 165, 191, 1011, 1323
StuI AGGCCT 1 cut(s) 565
StyD4I CCNGG 3 cut(s) 51, 98, 640
StyI CCWWGG 1 cut(s) 265
TaaI ACNGT 1 cut(s) 817
TaiI ACGT 1 cut(s) 1173
TaqI TCGA 3 cut(s) 58, 375, 986
TasI AATT 7 cut(s) 94, 411, 585, 648, 1006, 1046, 1162
TatI WGTACW 1 cut(s) 123
TfiI GAWTC 5 cut(s) 21, 29, 277, 760, 1014
Tru1I TTAA 7 cut(s) 158, 204, 605, 677, 804, 1133, 1287
Tru9I TTAA 7 cut(s) 158, 204, 605, 677, 804, 1133, 1287
TscAI CASTG 2 cut(s) 820, 1270
TseFI GTSAC 2 cut(s) 212, 817
TseI GCWGC 5 cut(s) 249, 379, 574, 1030, 1084
Tsp45I GTSAC 2 cut(s) 212, 817
TspDTI ATGAA 1 cut(s) 971
TspRI CASTG 2 cut(s) 820, 1270
Vha464I CTTAAG 1 cut(s) 157
VpaK11BI GGWCC 3 cut(s) 616, 644, 1221
XagI CCTNNNNNAGG 1 cut(s) 168
XapI RAATTY 1 cut(s) 1046
XbaI TCTAGA 2 cut(s) 190, 1010
XceI RCATGY 1 cut(s) 581
XmiI GTMKAC 2 cut(s) 175, 547
XspI CTAG 4 cut(s) 165, 191, 1011, 1323
ZrmI AGTACT 1 cut(s) 125
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.