Prupe.3G200500_v2.0.a1

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000498
Physical Location & Seq
Reverse (-)
20928708 .. 20933930
5223 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G200500.12

Sequence Viewer

Length: 1731 bp
ATGTACTTGTCTTCTGCAGGGCTGCAATCTGAGATGGATTTTTCTGAGTCCACAAAAGTAGTGTACAATAGGATCCAGAAAATAGAGCCTGAAAATGTGTCTAAGATTATAGGGTATCTTCTGTTGCAAGACCATGGTGAGCGTGACATGATTCGACTGGCGTTCAGCCCTGATAATTTGATCCAGTCTTTGATTAACAAAGCAAAAACTGAGCTTGGGTTATGCAAACTGGCAGTGTCTGCTCCAATCTCACCTTCTCAGGTGAACCAAGTTCCTGTTTCAGACCCGCCTTTACAATTCACTCCATACACTCCTAATTTAACTCGACCAATTTCATCTCCCACACCTCTCGGAGCAGTGAATCCATTTAGGGATCCCCAACTGCCTGGTGATCAGCAACCACTGCAAAATGTAGAATTTGTTCCACCAGGGTACTCTGATTCAGCTATTGAAGATTATCGCCTCCAAAATCAGATGCAGTTTTTGCCCGACTTTTCAAGCAATTACTGCTATCATGAACCTGCATTGAGTGTGAGAACTAGTCGAAGGTCTCCAAGTTTGCCTGAGTTTCCTCTTAAGGTTTGCCATTACTTCAATAAGGGGTTCTGTAAGCATGGGAGCAACTGCAGGTACTTCCATGGCCATCCCATGGCAGAGAGCTTTTCTCACCCGAATTTGAATGAGCTTTCAAATGATGATCATGTTGTCTCTCCTGGCTCCCTTGAAAAGCTGGAGATTGAAATAATTGAGCTTTTGAAATCAAGAAGAGGGTTCCCAATATCAATTGCCTCATTGCCAATGATGTATTATGAGAAATATGGGAGGACTTTACAGGCTGAGGGATACCTTACAGAGAGCCAGAGACATGGTAAGGCTGGCTATAGCCTTACAAAGCTTCTTGCTCGATTGAAGAACAGTATTCGACTCCTTGACAGGCCTCATGGACAGCACTCAGTCATATTGGCAGAAGATATCCCAAAATACTTAGAGTATGCTGGTGAGAAAACTGAACCTGGTGGAATTATTGCTGGTTCTCGACAGATTTATCTTACTTTTCCAGCTGAGAGTAATTTCACGGAGCAAGATGTTTCCAACTACTTCAACAAATATGGGCCGGTTCAAGATGTACGCATCCCATGTCAACAGAAGAGGATGTTTGGGTTTGTCACCTTTGTTTATGCAGAGACGGTCAGGCATATTTTGTCAAAAGGGAATCCCCATTTTGTATGTGGGGCCCGTGTTCTGGTGAAGCCTTACAGGGAAAAGTCTAGGCTTGTTGACAGGAAGTTTTCAGAGAAAATGCAGCATGCTATGTGCTACAATTCACATTTCATTGATGCGGATTCAGAGTTTCACTCTATGCCCAGAGTTTGTGAGAATGCAAGATTTTTAAGGAAGCAGTTCATGGAGGAAAATGAGCAAGCACTCGAACTTGAAAGAAGGCGTCTTTCGGAGATGCACTTAGCAGCTAAGCCCTTGTCCCATCATTTCTATTATGGCTACCCTATGGATGAGTTCAAACATCCAGAAGCCCATGCAGAGCAAGCAGAAGTCCCATCTGCAAAGGAATTTACTTATTTGCTGGATGTTTTGAATAATGGTTCCACCAGTGAGGGCAAAATCAGGCACAGAAACAGTAATTACAATGACCAGGATAGCAGCCAAGGAATTAACCTTCCAGAGAGCCCATTTGCGTCTCCTATAGTGAGTGGCATATCAACAGTTATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
OST-HTH RRM_1 zf-CCCH

Protein Analysis

577

Amino Acids

65.57

Weight (kDa)

6.63

Isoelectric Point (pI)

54.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000498)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G05160 AT2G05160 AT2G05160
fragaria_vesca FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_6g40900 FvH4_6g40900 FvH4_6g40900 FvH4_6g40900 FvH4_6g40900 FvH4_6g40900 FvH4_6g40900
malus_domestica MD03G1188600.v1.1 MD09G1123600.v1.1 MD17G1114400.v1.1
prunus_persica Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1
pyrus_communis pycom03g14150 pycom09g04760 pycom17g10570
rosa_chinensis RchiOBHm_Chr2g0156481 RchiOBHm_Chr5g0042651
rosa_laevigata RLG00000020916 RLG00000034148
rosa_multiflora Rmu_sc0004355.1_g000004 Rmu_sc0005392.1_g000010
rosa_roxburghii Rroxscaffold_1G00037990 Rroxscaffold_2G00093000
rosa_rugosa Rorug02G0453300 Rorug02G0453400 Rorug02G0453500 Rorug02G0453600 Rorug05G0203500 Rorug05G0203500 Rorug05G0203600.1 Rorug05G0203700
rosa_samantha Rh2AG519700 Rh2BG532000 Rh2CG504700 Rh2DG541000 Rh5AG288800 Rh5BG292900 Rh5CG325300 Rh5DG302800
rosa_wichuraiana Rw2G042840 Rw5G026790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 529, 618
AccB7I CCANNNNNTGG 1 cut(s) 649
AciI CCGC 2 cut(s) 287, 1340
AclWI GGATC 5 cut(s) 67, 80, 175, 368, 381
AcoI YGGCCR 1 cut(s) 640
AcsI RAATTY 3 cut(s) 416, 673, 1568
AcyI GRCGYC 1 cut(s) 1444
AfaI GTAC 5 cut(s) 5, 65, 434, 632, 1128
AfiI CCNNNNNNNGG 2 cut(s) 649, 1243
AflII CTTAAG 1 cut(s) 575
AhlI ACTAGT 1 cut(s) 539
AjnI CCWGG 5 cut(s) 385, 427, 712, 1012, 1650
AjuI GAANNNNNNNTTGG 2 cut(s) 238, 270
AluBI AGCT 9 cut(s) 214, 446, 660, 685, 730, 751, 895, 1061, 1469
AluI AGCT 9 cut(s) 214, 446, 660, 685, 730, 751, 895, 1061, 1469
Alw26I GTCTC 5 cut(s) 555, 712, 856, 1178, 1701
AlwI GGATC 5 cut(s) 67, 80, 175, 368, 381
AlwNI CAGNNNCTG 1 cut(s) 239
AoxI GGCC 4 cut(s) 640, 935, 1112, 1233
ApaI GGGCCC 1 cut(s) 1237
ApeKI GCWGC 4 cut(s) 22, 1303, 1466, 1659
ApoI RAATTY 3 cut(s) 416, 673, 1568
Asp700I GAANNNNTTC 2 cut(s) 420, 1400
AspS9I GGNCC 3 cut(s) 1112, 1233, 1234
AsuHPI GGTGA 8 cut(s) 149, 243, 274, 401, 659, 1010, 1159, 1258
BaeGI GKGCMC 1 cut(s) 1237
BalI TGGCCA 1 cut(s) 642
BamHI GGATCC 2 cut(s) 72, 373
BanII GRGCYC 2 cut(s) 1237, 1688
BbsI GAAGAC 1 cut(s) 3
BbvCI CCTCAGC 1 cut(s) 837
BbvI GCAGC 4 cut(s) 9, 1315, 1478, 1671
BccI CCATC 4 cut(s) 28, 651, 1491, 1564
BciT130I CCWGG 5 cut(s) 387, 429, 714, 1014, 1652
BciVI GTATCC 1 cut(s) 836
BclI TGATCA 2 cut(s) 391, 697
BcoDI GTCTC 5 cut(s) 555, 712, 856, 1178, 1701
BcuI ACTAGT 1 cut(s) 539
BfaI CTAG 2 cut(s) 540, 1269
BfmI CTRYAG 4 cut(s) 15, 625, 880, 1701
BfrI CTTAAG 1 cut(s) 575
BfuAI ACCTGC 2 cut(s) 529, 618
BfuI GTATCC 1 cut(s) 836
BisI GCNGC 4 cut(s) 23, 1304, 1467, 1660
BlpI GCTNAGC 1 cut(s) 1470
BlsI GCNGC 4 cut(s) 24, 1305, 1468, 1661
Bme1390I CCNGG 5 cut(s) 387, 429, 714, 1014, 1652
BmgT120I GGNCC 3 cut(s) 1112, 1233, 1234
BmiI GGNNCC 7 cut(s) 74, 375, 718, 773, 1234, 1235, 1603
BmrFI CCNGG 5 cut(s) 387, 429, 714, 1014, 1652
BmsI GCATC 4 cut(s) 465, 1140, 1327, 1446
BpiI GAAGAC 1 cut(s) 3
BplI GAGNNNNNCTC 4 cut(s) 649, 681, 1340, 1372
BpmI CTGGAG 1 cut(s) 752
Bpu10I CCTNAGC 1 cut(s) 837
Bpu1102I GCTNAGC 1 cut(s) 1470
BsaHI GRCGYC 1 cut(s) 1444
BsaI GGTCTC 1 cut(s) 555
BsaJI CCNNGG 5 cut(s) 133, 428, 637, 648, 1663
Bsc4I CCNNNNNNNGG 2 cut(s) 649, 1243
Bse118I RCCGGY 1 cut(s) 1114
Bse1I ACTGG 4 cut(s) 162, 184, 234, 1608
Bse3DI GCAATG 1 cut(s) 791
BseBI CCWGG 5 cut(s) 387, 429, 714, 1014, 1652
BseDI CCNNGG 5 cut(s) 133, 428, 637, 648, 1663
BseGI GGATG 6 cut(s) 643, 1131, 1158, 1516, 1522, 1591
BseLI CCNNNNNNNGG 2 cut(s) 649, 1243
BseMI GCAATG 1 cut(s) 791
BseMII CTCAG 8 cut(s) 21, 36, 201, 272, 555, 828, 966, 1053
BseNI ACTGG 4 cut(s) 162, 184, 234, 1608
BseSI GKGCMC 1 cut(s) 1237
BseXI GCAGC 4 cut(s) 9, 1315, 1478, 1671
BshFI GGCC 4 cut(s) 642, 937, 1114, 1235
BsiSI CCGG 1 cut(s) 1115
BslFI GGGAC 2 cut(s) 1465, 1538
BslI CCNNNNNNNGG 2 cut(s) 649, 1243
BsmAI GTCTC 5 cut(s) 555, 712, 856, 1178, 1701
BsmBI CGTCTC 2 cut(s) 1178, 1701
BsmFI GGGAC 2 cut(s) 1465, 1538
BsmI GAATGC 1 cut(s) 1384
BsnI GGCC 4 cut(s) 642, 937, 1114, 1235
Bso31I GGTCTC 1 cut(s) 555
Bsp120I GGGCCC 1 cut(s) 1233
Bsp1286I GDGCHC 2 cut(s) 1237, 1688
Bsp1407I TGTACA 1 cut(s) 63
Bsp143I GATC 5 cut(s) 72, 180, 373, 391, 697
Bsp1720I GCTNAGC 1 cut(s) 1470
Bsp19I CCATGG 3 cut(s) 133, 637, 648
BspACI CCGC 2 cut(s) 287, 1340
BspANI GGCC 4 cut(s) 642, 937, 1114, 1235
BspCNI CTCAG 8 cut(s) 22, 37, 202, 271, 556, 829, 965, 1054
BspHI TCATGA 1 cut(s) 514
BspLI GGNNCC 7 cut(s) 74, 375, 718, 773, 1234, 1235, 1603
BspMAI CTGCAG 2 cut(s) 19, 629
BspMI ACCTGC 2 cut(s) 529, 618
BspPI GGATC 5 cut(s) 67, 80, 175, 368, 381
BspTI CTTAAG 1 cut(s) 575
BspTNI GGTCTC 1 cut(s) 555
BsrDI GCAATG 1 cut(s) 791
BsrFI RCCGGY 1 cut(s) 1114
BsrGI TGTACA 1 cut(s) 63
BsrI ACTGG 4 cut(s) 162, 184, 234, 1608
BssAI RCCGGY 1 cut(s) 1114
BssECI CCNNGG 5 cut(s) 133, 428, 637, 648, 1663
BssMI GATC 5 cut(s) 72, 180, 373, 391, 697
BssNI GRCGYC 1 cut(s) 1444
BssT1I CCWWGG 4 cut(s) 133, 637, 648, 1663
Bst2UI CCWGG 5 cut(s) 387, 429, 714, 1014, 1652
Bst4CI ACNGT 4 cut(s) 917, 1189, 1637, 1723
Bst6I CTCTTC 2 cut(s) 760, 1142
BstACI GRCGYC 1 cut(s) 1444
BstAFI CTTAAG 1 cut(s) 575
BstAPI GCANNNNNTGC 4 cut(s) 239, 403, 484, 507
BstAUI TGTACA 1 cut(s) 63
BstC8I GCNNGC 4 cut(s) 877, 1308, 1422, 1545
BstDSI CCRYGG 3 cut(s) 133, 637, 648
BstF5I GGATG 6 cut(s) 643, 1131, 1158, 1516, 1522, 1591
BstKTI GATC 5 cut(s) 75, 183, 376, 394, 700
BstMAI GTCTC 5 cut(s) 555, 712, 856, 1178, 1701
BstMBI GATC 5 cut(s) 72, 180, 373, 391, 697
BstMWI GCNNNNNNNGC 5 cut(s) 239, 403, 484, 507, 1544
BstNI CCWGG 5 cut(s) 387, 429, 714, 1014, 1652
BstNSI RCATGY 1 cut(s) 1310
BstSCI CCNGG 5 cut(s) 385, 427, 712, 1012, 1650
BstSFI CTRYAG 4 cut(s) 15, 625, 880, 1701
BstSLI GKGCMC 1 cut(s) 1237
BstV1I GCAGC 4 cut(s) 9, 1315, 1478, 1671
BstV2I GAAGAC 1 cut(s) 3
BstX2I RGATCY 2 cut(s) 72, 373
BstXI CCANNNNNNTGG 2 cut(s) 386, 866
BstYI RGATCY 2 cut(s) 72, 373
BsuI GTATCC 1 cut(s) 836
BsuRI GGCC 4 cut(s) 642, 937, 1114, 1235
BtgI CCRYGG 3 cut(s) 133, 637, 648
BtsCI GGATG 6 cut(s) 643, 1131, 1158, 1516, 1522, 1591
BtsI GCAGTG 3 cut(s) 240, 363, 401
BtsIMutI CAGTG 4 cut(s) 240, 363, 401, 1615
BveI ACCTGC 2 cut(s) 529, 618
Cac8I GCNNGC 4 cut(s) 877, 1308, 1422, 1545
CaiI CAGNNNCTG 1 cut(s) 239
CciI TCATGA 1 cut(s) 514
Cfr10I RCCGGY 1 cut(s) 1114
Cfr13I GGNCC 3 cut(s) 1112, 1233, 1234
CseI GACGC 2 cut(s) 1433, 1683
CsiI ACCWGGT 1 cut(s) 1012
Csp6I GTAC 5 cut(s) 4, 64, 433, 631, 1127
CviQI GTAC 5 cut(s) 4, 64, 433, 631, 1127
DpnI GATC 5 cut(s) 74, 182, 375, 393, 699
DpnII GATC 5 cut(s) 72, 180, 373, 391, 697
EaeI YGGCCR 1 cut(s) 640
Eam1104I CTCTTC 2 cut(s) 760, 1142
EarI CTCTTC 2 cut(s) 760, 1142
Eco130I CCWWGG 4 cut(s) 133, 637, 648, 1663
Eco147I AGGCCT 1 cut(s) 937
Eco24I GRGCYC 2 cut(s) 1237, 1688
Eco31I GGTCTC 1 cut(s) 555
Eco32I GATATC 1 cut(s) 973
EcoO109I RGGNCCY 1 cut(s) 1233
EcoRII CCWGG 5 cut(s) 385, 427, 712, 1012, 1650
EcoRV GATATC 1 cut(s) 973
EcoT14I CCWWGG 4 cut(s) 133, 637, 648, 1663
EcoT38I GRGCYC 2 cut(s) 1237, 1688
ErhI CCWWGG 4 cut(s) 133, 637, 648, 1663
Esp3I CGTCTC 2 cut(s) 1178, 1701
FaqI GGGAC 2 cut(s) 1465, 1538
FauI CCCGC 1 cut(s) 294
FbaI TGATCA 2 cut(s) 391, 697
Fnu4HI GCNGC 4 cut(s) 23, 1304, 1467, 1660
FokI GGATG 6 cut(s) 630, 1118, 1165, 1509, 1523, 1598
FriOI GRGCYC 2 cut(s) 1237, 1688
Fsp4HI GCNGC 4 cut(s) 23, 1304, 1467, 1660
FspBI CTAG 2 cut(s) 540, 1269
GluI GCNGC 4 cut(s) 23, 1304, 1467, 1660
GsuI CTGGAG 1 cut(s) 752
HaeIII GGCC 4 cut(s) 642, 937, 1114, 1235
HapII CCGG 1 cut(s) 1115
HgaI GACGC 2 cut(s) 1433, 1683
Hin1I GRCGYC 1 cut(s) 1444
HincII GTYRAC 2 cut(s) 1142, 1279
HindII GTYRAC 2 cut(s) 1142, 1279
HindIII AAGCTT 1 cut(s) 893
HinfI GANTC 7 cut(s) 47, 151, 361, 440, 924, 1213, 1343
HpaII CCGG 1 cut(s) 1115
HphI GGTGA 8 cut(s) 149, 243, 274, 401, 659, 1010, 1159, 1258
Hpy166II GTNNAC 5 cut(s) 51, 64, 265, 1142, 1279
Hpy188I TCNGA 9 cut(s) 31, 46, 283, 353, 439, 474, 1294, 1348, 1453
Hpy188III TCNNGA 7 cut(s) 76, 515, 762, 1035, 1121, 1526, 1679
Hpy8I GTNNAC 5 cut(s) 51, 64, 265, 1142, 1279
HpyAV CCTTC 4 cut(s) 264, 540, 1434, 1685
HpyCH4III ACNGT 4 cut(s) 917, 1189, 1637, 1723
HpyF10VI GCNNNNNNNGC 5 cut(s) 239, 403, 484, 507, 1544
Hsp92I GRCGYC 1 cut(s) 1444
Ksp22I TGATCA 2 cut(s) 391, 697
Kzo9I GATC 5 cut(s) 72, 180, 373, 391, 697
LmnI GCTCC 5 cut(s) 247, 353, 618, 722, 1078
Lsp1109I GCAGC 4 cut(s) 9, 1315, 1478, 1671
LweI GCATC 4 cut(s) 465, 1140, 1327, 1446
MabI ACCWGGT 1 cut(s) 1012
MaeI CTAG 2 cut(s) 540, 1269
MaeIII GTNAC 2 cut(s) 143, 1165
MalI GATC 5 cut(s) 74, 182, 375, 393, 699
MboI GATC 5 cut(s) 72, 180, 373, 391, 697
MboII GAAGA 7 cut(s) 3, 110, 464, 777, 922, 980, 1159
MfeI CAATTG 1 cut(s) 783
MflI RGATCY 2 cut(s) 72, 373
MhlI GDGCHC 2 cut(s) 1237, 1688
MlsI TGGCCA 1 cut(s) 642
MluNI TGGCCA 1 cut(s) 642
MlyI GAGTC 2 cut(s) 56, 918
MmeI TCCRAC 1 cut(s) 1116
Mox20I TGGCCA 1 cut(s) 642
MroXI GAANNNNTTC 2 cut(s) 420, 1400
MscI TGGCCA 1 cut(s) 642
MseI TTAA 5 cut(s) 195, 320, 576, 1391, 1671
Msp20I TGGCCA 1 cut(s) 642
MspA1I CMGCKG 1 cut(s) 1061
MspCI CTTAAG 1 cut(s) 575
MspI CCGG 1 cut(s) 1115
MspR9I CCNGG 5 cut(s) 387, 429, 714, 1014, 1652
MunI CAATTG 1 cut(s) 783
Mva1269I GAATGC 1 cut(s) 1384
MvaI CCWGG 5 cut(s) 387, 429, 714, 1014, 1652
MwoI GCNNNNNNNGC 5 cut(s) 239, 403, 484, 507, 1544
NcoI CCATGG 3 cut(s) 133, 637, 648
NdeII GATC 5 cut(s) 72, 180, 373, 391, 697
NlaIV GGNNCC 7 cut(s) 74, 375, 718, 773, 1234, 1235, 1603
NmuCI GTSAC 2 cut(s) 143, 1165
NspI RCATGY 1 cut(s) 1310
PaeI GCATGC 1 cut(s) 1310
PagI TCATGA 1 cut(s) 514
PceI AGGCCT 1 cut(s) 937
PctI GAATGC 1 cut(s) 1384
PdmI GAANNNNTTC 2 cut(s) 420, 1400
PfeI GAWTC 5 cut(s) 151, 361, 440, 1213, 1343
PflMI CCANNNNNTGG 1 cut(s) 649
PkrI GCNGC 4 cut(s) 24, 1305, 1468, 1661
PleI GAGTC 2 cut(s) 55, 918
PpsI GAGTC 2 cut(s) 55, 918
Psp6I CCWGG 5 cut(s) 385, 427, 712, 1012, 1650
PspGI CCWGG 5 cut(s) 385, 427, 712, 1012, 1650
PspN4I GGNNCC 7 cut(s) 74, 375, 718, 773, 1234, 1235, 1603
PspOMI GGGCCC 1 cut(s) 1233
PspPI GGNCC 3 cut(s) 1112, 1233, 1234
PsrI GAACNNNNNNTAC 2 cut(s) 405, 437
PstI CTGCAG 2 cut(s) 19, 629
PstNI CAGNNNCTG 1 cut(s) 239
PsuI RGATCY 2 cut(s) 72, 373
PvuII CAGCTG 1 cut(s) 1061
RsaI GTAC 5 cut(s) 5, 65, 434, 632, 1128
RsaNI GTAC 5 cut(s) 4, 64, 433, 631, 1127
SaqAI TTAA 5 cut(s) 195, 320, 576, 1391, 1671
SatI GCNGC 4 cut(s) 23, 1304, 1467, 1660
Sau3AI GATC 5 cut(s) 72, 180, 373, 391, 697
Sau96I GGNCC 3 cut(s) 1112, 1233, 1234
SchI GAGTC 2 cut(s) 56, 918
ScrFI CCNGG 5 cut(s) 387, 429, 714, 1014, 1652
SduI GDGCHC 2 cut(s) 1237, 1688
SexAI ACCWGGT 1 cut(s) 1012
SfaNI GCATC 4 cut(s) 465, 1140, 1327, 1446
SfcI CTRYAG 4 cut(s) 15, 625, 880, 1701
SmlI CTYRAG 1 cut(s) 575
SmoI CTYRAG 1 cut(s) 575
SpeI ACTAGT 1 cut(s) 539
SphI GCATGC 1 cut(s) 1310
SseBI AGGCCT 1 cut(s) 937
SsiI CCGC 2 cut(s) 287, 1340
SspMI CTAG 2 cut(s) 540, 1269
StuI AGGCCT 1 cut(s) 937
StyD4I CCNGG 5 cut(s) 385, 427, 712, 1012, 1650
StyI CCWWGG 4 cut(s) 133, 637, 648, 1663
TaaI ACNGT 4 cut(s) 917, 1189, 1637, 1723
TaqI TCGA 7 cut(s) 154, 325, 544, 904, 922, 1036, 1428
TatI WGTACW 2 cut(s) 3, 63
TfiI GAWTC 5 cut(s) 151, 361, 440, 1213, 1343
Tru1I TTAA 5 cut(s) 195, 320, 576, 1391, 1671
Tru9I TTAA 5 cut(s) 195, 320, 576, 1391, 1671
TscAI CASTG 4 cut(s) 240, 363, 408, 1615
TseFI GTSAC 2 cut(s) 143, 1165
TseI GCWGC 4 cut(s) 22, 1303, 1466, 1659
Tsp45I GTSAC 2 cut(s) 143, 1165
TspDTI ATGAA 4 cut(s) 324, 531, 1321, 1393
TspGWI ACGGA 1 cut(s) 1091
TspRI CASTG 4 cut(s) 240, 363, 408, 1615
Van91I CCANNNNNTGG 1 cut(s) 649
Vha464I CTTAAG 1 cut(s) 575
XapI RAATTY 3 cut(s) 416, 673, 1568
XceI RCATGY 1 cut(s) 1310
XcmI CCANNNNNNNNNTGG 1 cut(s) 1226
XmnI GAANNNNTTC 2 cut(s) 420, 1400
XspI CTAG 2 cut(s) 540, 1269
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.