RLG00000034148

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0000498
Physical Location & Seq
Reverse (-)
37326026 .. 37328855
2830 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000034148

Sequence Viewer

Length: 1698 bp
ATGGATTTTTCGGACTCGACGAAACTTGTTTTTGGTAGAGTACAGGAGGTAGACCCAGAAAATGTTACAAGGATTATAGGTTATCTTCTTTTACAAGGTCATGGGGAACACGAAATGGCTCGCTTGGCCCTGGCTCCAGACCATCTGTTTCACCAAGTGGTGCTGAAAGCCAAGGCTGAACTTCAGCGGTTGGCTAACAAATCAGTGTCATCCCCAATCTCACCATCCATAAATCCACCATCCGCTGCTTTCGCCCCATTTTCGCCTGTTTCTTCTAGGCCTCCTGCAGCCTTTCGGCTTCCAACCCCCTGTTGGGATCCCCAACTTGTTTCTAAGCCGAACATGGATTTCATGCCATTCGGATTCTCTGATTCTACTGAGGAACTGCAAAACCAGGCTCGATTTTTTAGTTTTGAGGATCAAATGGAACCACTCAATTCCGGGATTTCAGGATACCCTGATGAGTACTATTATCGGGATGCTACACTCGGGGGGAGCTTAAGTCCTAGACCAGGTAGACGATTTTCAAGTCTAGAGTTTCCCGTTAAGATTTGTCACTACTTCAGTAAGGGCTTTTGTAAGCATGGAAGCAGCTGTAGGTATTACCATGGACAAGTGATTCCTGAGAGCTTCTCTCAGATGTATGGGAATGATGGCATTATTGATGATCATGTTATCTCGCCCATGTCTCTTGAGAAGTTGGAGTGGGAAATCGTCGAGCTGCTTAGATCAAGAAGGGGAACTCCTATTTCAATTGCTTCTCTGCCAATGATGTATTATGAGAAATATGGAAAATCTCTTCAAGCAGAAGGTTACCTCACCGAAAGCCAGAGACATGGGAAAGCTGGTTATAGTTTGACAAAGCTTCTTGCTCGGCTTGGAAGCAGTATACGGCTGATTGACAGGCCTCATGGGCAGCACGCAATAATTTTGGCAGAAGACTCATTAAAATACACGGACCATCGGAATGAGAGAGGCGATCCTGGTCCAATTGTTAGTGGTTCTCGGCAAATATATTTAACATTTCCAGCTGACAGCACCTTTAGTGAAGATGATGTCTCCAACTACTTCAACACCTTTGGCCCTGTTGAAGATGTAAGGATCCCCTGCCAACCGAAAAGGATGTTTGGGTTTGTAACCTTTGTTAATGCAGACACTGTGACAATGATTTTGTCAAAAGGAAATCCTCATTTTGTTTGTGGGGCTCGTGTTCTTGTGAAACCTTACAGGGAAAAATCAAAGCTTGCTGAAAGAAAGTACCAAGAGAGAATGGAGCCAGCTGATCAATATTCTCCACACTACTCAGACATGGAACCCGAGTTTCATTCGATGTCAAGATGGTGTCATAATTCTAGATTCCTGCGAAAAAAGCTGCTGGAAGAGCAAGAATTTGCACTTGAACTTGAGAGGAGTAGGCTGGCTGGGCTGCATTTTATGCAAAAACCAGTTGCGAATCAGCCCTATTCTGGCTACTTAATGGATGGGCGAAAAGTCTCGGAAGTTCATGCAGATAATTTCAACGTCCCGCCTGCAGAATGTTTTGATTATCTGTTAGATGTTATAAACAATGGGTCCACAAGTGATGATAAACCCAAACATACGGGCACCAACTACACCGAGCAAGAGAGTCAAGGACTTAATCTCCCAGATAGCCCATTTGCAACTTCAATAGCTAGCGGCATTTCAGCTGTCATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
OST-HTH RRM_1 zf-CCCH

Protein Analysis

566

Amino Acids

63.8

Weight (kDa)

6.11

Isoelectric Point (pI)

48.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PABC_AtC3H46 PF23182 1 - 65 6.2e-28 AtC3H46 PABC domain
RRM_1 PF00076 348 - 395 3.8e-06 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000498)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G05160 AT2G05160 AT2G05160
fragaria_vesca FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_6g40900 FvH4_6g40900 FvH4_6g40900 FvH4_6g40900 FvH4_6g40900 FvH4_6g40900 FvH4_6g40900
malus_domestica MD03G1188600.v1.1 MD09G1123600.v1.1 MD17G1114400.v1.1
prunus_persica Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1
pyrus_communis pycom03g14150 pycom09g04760 pycom17g10570
rosa_chinensis RchiOBHm_Chr2g0156481 RchiOBHm_Chr5g0042651
rosa_laevigata RLG00000020916 RLG00000034148
rosa_multiflora Rmu_sc0004355.1_g000004 Rmu_sc0005392.1_g000010
rosa_roxburghii Rroxscaffold_1G00037990 Rroxscaffold_2G00093000
rosa_rugosa Rorug02G0453300 Rorug02G0453400 Rorug02G0453500 Rorug02G0453600 Rorug05G0203500 Rorug05G0203500 Rorug05G0203600.1 Rorug05G0203700
rosa_samantha Rh2AG519700 Rh2BG532000 Rh2CG504700 Rh2DG541000 Rh5AG288800 Rh5BG292900 Rh5CG325300 Rh5DG302800
rosa_wichuraiana Rw2G042840 Rw5G026790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1562
AccB1I GGYRCC 1 cut(s) 1604
AccI GTMKAC 3 cut(s) 51, 517, 889
AciI CCGC 4 cut(s) 187, 243, 1526, 1677
AclWI GGATC 6 cut(s) 311, 324, 426, 974, 1096, 1109
AcsI RAATTY 1 cut(s) 1388
AcuI CTGAAG 2 cut(s) 167, 547
AdeI CACNNNGTG 1 cut(s) 157
AfaI GTAC 3 cut(s) 42, 467, 1259
AfiI CCNNNNNNNGG 4 cut(s) 312, 313, 512, 1466
AflII CTTAAG 1 cut(s) 499
AgsI TTSAA 8 cut(s) 528, 753, 803, 1072, 1091, 1400, 1519, 1668
AjnI CCWGG 4 cut(s) 129, 393, 511, 982
Alw26I GTCTC 4 cut(s) 693, 826, 1063, 1498
AlwI GGATC 6 cut(s) 311, 324, 426, 974, 1096, 1109
AlwNI CAGNNNCTG 1 cut(s) 1157
Ama87I CYCGRG 2 cut(s) 488, 1316
AoxI GGCC 4 cut(s) 126, 278, 905, 1081
ApeKI GCWGC 7 cut(s) 245, 287, 591, 721, 916, 1372, 1426
ApoI RAATTY 1 cut(s) 1388
ArsI GACNNNNNNTTYG 2 cut(s) 1153, 1185
AspS9I GGNCC 5 cut(s) 127, 958, 986, 1082, 1572
AsuC2I CCSGG 1 cut(s) 442
AsuHPI GGTGA 3 cut(s) 143, 213, 811
AsuNHI GCTAGC 1 cut(s) 1673
AvaI CYCGRG 2 cut(s) 488, 1316
AvaII GGWCC 3 cut(s) 958, 986, 1572
BaeGI GKGCMC 1 cut(s) 1607
BamHI GGATCC 2 cut(s) 316, 1101
BanI GGYRCC 1 cut(s) 1604
BanII GRGCYC 1 cut(s) 1207
BauI CACGAG 1 cut(s) 1206
BbsI GAAGAC 1 cut(s) 945
BbvI GCAGC 7 cut(s) 232, 299, 603, 708, 928, 1359, 1413
BccI CCATC 7 cut(s) 150, 232, 247, 647, 969, 1332, 1475
BceAI ACGGC 1 cut(s) 908
BciT130I CCWGG 4 cut(s) 131, 395, 513, 984
BciVI GTATCC 1 cut(s) 446
BclI TGATCA 2 cut(s) 667, 1282
BcnI CCSGG 1 cut(s) 442
BcoDI GTCTC 4 cut(s) 693, 826, 1063, 1498
BfaI CTAG 5 cut(s) 276, 507, 533, 1353, 1674
BfmI CTRYAG 3 cut(s) 285, 595, 1530
BfrI CTTAAG 1 cut(s) 499
BfuI GTATCC 1 cut(s) 446
BglI GCCNNNNNGGC 1 cut(s) 913
BisI GCNGC 8 cut(s) 246, 288, 592, 722, 917, 1373, 1427, 1678
BlsI GCNGC 8 cut(s) 247, 289, 593, 723, 918, 1374, 1428, 1679
BmcAI AGTACT 1 cut(s) 467
Bme1390I CCNGG 5 cut(s) 131, 395, 442, 513, 984
Bme18I GGWCC 3 cut(s) 958, 986, 1572
BmeT110I CYCGRG 2 cut(s) 488, 1316
BmgT120I GGNCC 5 cut(s) 127, 958, 986, 1082, 1572
BmiI GGNNCC 8 cut(s) 135, 318, 429, 1103, 1275, 1314, 1573, 1606
BmrFI CCNGG 5 cut(s) 131, 395, 442, 513, 984
BmsI GCATC 1 cut(s) 469
BmtI GCTAGC 1 cut(s) 1677
BpiI GAAGAC 1 cut(s) 945
BplI GAGNNNNNCTC 4 cut(s) 617, 649, 619, 651
BpmI CTGGAG 1 cut(s) 120
BpuEI CTTGAG 2 cut(s) 713, 1424
BpuMI CCSGG 1 cut(s) 442
BsaJI CCNNGG 3 cut(s) 129, 171, 607
BsaXI ACNNNNNCTCC 4 cut(s) 487, 517, 1626, 1656
Bsc4I CCNNNNNNNGG 4 cut(s) 312, 313, 512, 1466
Bse1I ACTGG 1 cut(s) 1445
BseBI CCWGG 4 cut(s) 131, 395, 513, 984
BseDI CCNNGG 3 cut(s) 129, 171, 607
BseGI GGATG 6 cut(s) 209, 224, 239, 484, 1128, 1486
BseLI CCNNNNNNNGG 4 cut(s) 312, 313, 512, 1466
BseMII CTCAG 4 cut(s) 369, 615, 650, 1317
BseNI ACTGG 1 cut(s) 1445
BseRI GAGGAG 1 cut(s) 1423
BseSI GKGCMC 1 cut(s) 1607
BseXI GCAGC 7 cut(s) 232, 299, 603, 708, 928, 1359, 1413
BseYI CCCAGC 1 cut(s) 1421
BshFI GGCC 4 cut(s) 128, 280, 907, 1083
BshNI GGYRCC 1 cut(s) 1604
BsiHKCI CYCGRG 2 cut(s) 488, 1316
BsiSI CCGG 1 cut(s) 441
BslFI GGGAC 1 cut(s) 1508
BslI CCNNNNNNNGG 4 cut(s) 312, 313, 512, 1466
BsmAI GTCTC 4 cut(s) 693, 826, 1063, 1498
BsmFI GGGAC 1 cut(s) 1508
BsnI GGCC 4 cut(s) 128, 280, 907, 1083
BsoBI CYCGRG 2 cut(s) 488, 1316
Bsp1286I GDGCHC 2 cut(s) 1207, 1607
Bsp143I GATC 7 cut(s) 316, 418, 667, 728, 979, 1101, 1282
Bsp19I CCATGG 1 cut(s) 607
BspACI CCGC 4 cut(s) 187, 243, 1526, 1677
BspANI GGCC 4 cut(s) 128, 280, 907, 1083
BspCNI CTCAG 4 cut(s) 370, 616, 649, 1316
BspLI GGNNCC 8 cut(s) 135, 318, 429, 1103, 1275, 1314, 1573, 1606
BspMAI CTGCAG 2 cut(s) 289, 1534
BspOI GCTAGC 1 cut(s) 1677
BspPI GGATC 6 cut(s) 311, 324, 426, 974, 1096, 1109
BspQI GCTCTTC 1 cut(s) 1374
BspT107I GGYRCC 1 cut(s) 1604
BspTI CTTAAG 1 cut(s) 499
BsrI ACTGG 1 cut(s) 1445
BssECI CCNNGG 3 cut(s) 129, 171, 607
BssMI GATC 7 cut(s) 316, 418, 667, 728, 979, 1101, 1282
BssNAI GTATAC 1 cut(s) 890
BssSI CACGAG 1 cut(s) 1206
BssT1I CCWWGG 2 cut(s) 171, 607
Bst1107I GTATAC 1 cut(s) 890
Bst2BI CACGAG 1 cut(s) 1206
Bst2UI CCWGG 4 cut(s) 131, 395, 513, 984
Bst4CI ACNGT 1 cut(s) 1159
Bst6I CTCTTC 2 cut(s) 804, 1374
BstAFI CTTAAG 1 cut(s) 499
BstAPI GCANNNNNTGC 1 cut(s) 1435
BstC8I GCNNGC 7 cut(s) 121, 921, 1245, 1278, 1419, 1530, 1675
BstDEI CTNAG 6 cut(s) 333, 378, 624, 636, 725, 1303
BstDSI CCRYGG 1 cut(s) 607
BstEII GGTNACC 1 cut(s) 812
BstENI CCTNNNNNAGG 1 cut(s) 510
BstF5I GGATG 6 cut(s) 209, 224, 239, 484, 1128, 1486
BstKTI GATC 7 cut(s) 319, 421, 670, 731, 982, 1104, 1285
BstMAI GTCTC 4 cut(s) 693, 826, 1063, 1498
BstMBI GATC 7 cut(s) 316, 418, 667, 728, 979, 1101, 1282
BstMWI GCNNNNNNNGC 7 cut(s) 125, 251, 913, 1369, 1381, 1423, 1435
BstNI CCWGG 4 cut(s) 131, 395, 513, 984
BstPI GGTNACC 1 cut(s) 812
BstSCI CCNGG 5 cut(s) 129, 393, 440, 511, 982
BstSFI CTRYAG 3 cut(s) 285, 595, 1530
BstSLI GKGCMC 1 cut(s) 1607
BstV1I GCAGC 7 cut(s) 232, 299, 603, 708, 928, 1359, 1413
BstV2I GAAGAC 1 cut(s) 945
BstX2I RGATCY 2 cut(s) 316, 1101
BstXI CCANNNNNNTGG 1 cut(s) 836
BstYI RGATCY 2 cut(s) 316, 1101
BstZ17I GTATAC 1 cut(s) 890
BsuI GTATCC 1 cut(s) 446
BsuRI GGCC 4 cut(s) 128, 280, 907, 1083
BtgI CCRYGG 1 cut(s) 607
BtsCI GGATG 6 cut(s) 209, 224, 239, 484, 1128, 1486
BtsIMutI CAGTG 2 cut(s) 210, 1155
Cac8I GCNNGC 7 cut(s) 121, 921, 1245, 1278, 1419, 1530, 1675
CaiI CAGNNNCTG 1 cut(s) 1157
Cfr13I GGNCC 5 cut(s) 127, 958, 986, 1082, 1572
CsiI ACCWGGT 1 cut(s) 511
Csp6I GTAC 3 cut(s) 41, 466, 1258
CviQI GTAC 3 cut(s) 41, 466, 1258
DdeI CTNAG 6 cut(s) 333, 378, 624, 636, 725, 1303
DpnI GATC 7 cut(s) 318, 420, 669, 730, 981, 1103, 1284
DpnII GATC 7 cut(s) 316, 418, 667, 728, 979, 1101, 1282
DraIII CACNNNGTG 1 cut(s) 157
Eam1104I CTCTTC 2 cut(s) 804, 1374
EarI CTCTTC 2 cut(s) 804, 1374
Eco130I CCWWGG 2 cut(s) 171, 607
Eco147I AGGCCT 2 cut(s) 280, 907
Eco24I GRGCYC 1 cut(s) 1207
Eco47I GGWCC 3 cut(s) 958, 986, 1572
Eco57I CTGAAG 2 cut(s) 167, 547
Eco88I CYCGRG 2 cut(s) 488, 1316
Eco91I GGTNACC 1 cut(s) 812
EcoNI CCTNNNNNAGG 1 cut(s) 510
EcoO65I GGTNACC 1 cut(s) 812
EcoRII CCWGG 4 cut(s) 129, 393, 511, 982
EcoT14I CCWWGG 2 cut(s) 171, 607
EcoT38I GRGCYC 1 cut(s) 1207
ErhI CCWWGG 2 cut(s) 171, 607
FaqI GGGAC 1 cut(s) 1508
FauI CCCGC 1 cut(s) 1533
FbaI TGATCA 2 cut(s) 667, 1282
FblI GTMKAC 3 cut(s) 51, 517, 889
Fnu4HI GCNGC 8 cut(s) 246, 288, 592, 722, 917, 1373, 1427, 1678
FokI GGATG 6 cut(s) 196, 211, 226, 491, 1135, 1493
FriOI GRGCYC 1 cut(s) 1207
Fsp4HI GCNGC 8 cut(s) 246, 288, 592, 722, 917, 1373, 1427, 1678
FspBI CTAG 5 cut(s) 276, 507, 533, 1353, 1674
GluI GCNGC 8 cut(s) 246, 288, 592, 722, 917, 1373, 1427, 1678
GsaI CCCAGC 1 cut(s) 1425
GsuI CTGGAG 1 cut(s) 120
HaeIII GGCC 4 cut(s) 128, 280, 907, 1083
HapII CCGG 1 cut(s) 441
HindIII AAGCTT 2 cut(s) 863, 1241
HinfI GANTC 8 cut(s) 14, 363, 371, 619, 941, 1356, 1453, 1627
HpaII CCGG 1 cut(s) 441
HphI GGTGA 3 cut(s) 143, 213, 811
Hpy166II GTNNAC 4 cut(s) 52, 518, 890, 1575
Hpy188I TCNGA 7 cut(s) 13, 362, 370, 639, 966, 1306, 1498
Hpy188III TCNNGA 9 cut(s) 137, 450, 476, 533, 623, 692, 732, 1335, 1353
Hpy8I GTNNAC 4 cut(s) 52, 518, 890, 1575
Hpy99I CGWCG 2 cut(s) 22, 719
HpyAV CCTTC 2 cut(s) 729, 803
HpyCH4III ACNGT 1 cut(s) 1159
HpyCH4IV ACGT 1 cut(s) 1521
HpyCH4V TGCA 9 cut(s) 287, 388, 1151, 1394, 1429, 1438, 1508, 1532, 1661
HpyF10VI GCNNNNNNNGC 7 cut(s) 125, 251, 913, 1369, 1381, 1423, 1435
HpyF3I CTNAG 6 cut(s) 333, 378, 624, 636, 725, 1303
HpySE526I ACGT 1 cut(s) 1521
Ksp22I TGATCA 2 cut(s) 667, 1282
Kzo9I GATC 7 cut(s) 316, 418, 667, 728, 979, 1101, 1282
LguI GCTCTTC 1 cut(s) 1374
LmnI GCTCC 3 cut(s) 139, 495, 1273
Lsp1109I GCAGC 7 cut(s) 232, 299, 603, 708, 928, 1359, 1413
LweI GCATC 1 cut(s) 469
MabI ACCWGGT 1 cut(s) 511
MaeI CTAG 5 cut(s) 276, 507, 533, 1353, 1674
MaeII ACGT 1 cut(s) 1521
MaeIII GTNAC 5 cut(s) 64, 554, 812, 1135, 1159
MalI GATC 7 cut(s) 318, 420, 669, 730, 981, 1103, 1284
MboI GATC 7 cut(s) 316, 418, 667, 728, 979, 1101, 1282
MboII GAAGA 7 cut(s) 77, 264, 791, 950, 1061, 1103, 1391
MfeI CAATTG 2 cut(s) 753, 990
MflI RGATCY 2 cut(s) 316, 1101
MhlI GDGCHC 2 cut(s) 1207, 1607
MluCI AATT 7 cut(s) 436, 753, 927, 990, 1348, 1388, 1513
MlyI GAGTC 3 cut(s) 8, 935, 1636
MmeI TCCRAC 3 cut(s) 326, 681, 1086
MnlI CCTC 9 cut(s) 40, 291, 373, 409, 827, 918, 968, 1197, 1401
MseI TTAA 7 cut(s) 500, 546, 947, 1019, 1146, 1475, 1638
MslI CAYNNNNRTG 1 cut(s) 966
MspA1I CMGCKG 6 cut(s) 187, 245, 594, 1031, 1280, 1688
MspCI CTTAAG 1 cut(s) 499
MspI CCGG 1 cut(s) 441
MspR9I CCNGG 5 cut(s) 131, 395, 442, 513, 984
MunI CAATTG 2 cut(s) 753, 990
MvaI CCWGG 4 cut(s) 131, 395, 513, 984
MwoI GCNNNNNNNGC 7 cut(s) 125, 251, 913, 1369, 1381, 1423, 1435
NciI CCSGG 1 cut(s) 442
NcoI CCATGG 1 cut(s) 607
NdeII GATC 7 cut(s) 316, 418, 667, 728, 979, 1101, 1282
NheI GCTAGC 1 cut(s) 1673
NlaIV GGNNCC 8 cut(s) 135, 318, 429, 1103, 1275, 1314, 1573, 1606
NmeAIII GCCGAG 2 cut(s) 853, 985
NmuCI GTSAC 2 cut(s) 554, 1159
PceI AGGCCT 2 cut(s) 280, 907
PciSI GCTCTTC 1 cut(s) 1374
PcsI WCGNNNNNNNCGW 1 cut(s) 17
PfeI GAWTC 5 cut(s) 363, 371, 619, 1356, 1453
PfoI TCCNGGA 1 cut(s) 440
PkrI GCNGC 8 cut(s) 247, 289, 593, 723, 918, 1374, 1428, 1679
PleI GAGTC 3 cut(s) 8, 935, 1635
PpsI GAGTC 3 cut(s) 8, 935, 1635
PsiI TTATAA 1 cut(s) 1562
Psp6I CCWGG 4 cut(s) 129, 393, 511, 982
PspEI GGTNACC 1 cut(s) 812
PspFI CCCAGC 1 cut(s) 1421
PspGI CCWGG 4 cut(s) 129, 393, 511, 982
PspN4I GGNNCC 8 cut(s) 135, 318, 429, 1103, 1275, 1314, 1573, 1606
PspPI GGNCC 5 cut(s) 127, 958, 986, 1082, 1572
PstI CTGCAG 2 cut(s) 289, 1534
PstNI CAGNNNCTG 1 cut(s) 1157
PsuI RGATCY 2 cut(s) 316, 1101
PvuII CAGCTG 4 cut(s) 594, 1031, 1280, 1688
RsaI GTAC 3 cut(s) 42, 467, 1259
RsaNI GTAC 3 cut(s) 41, 466, 1258
RseI CAYNNNNRTG 1 cut(s) 966
SapI GCTCTTC 1 cut(s) 1374
SaqAI TTAA 7 cut(s) 500, 546, 947, 1019, 1146, 1475, 1638
SatI GCNGC 8 cut(s) 246, 288, 592, 722, 917, 1373, 1427, 1678
Sau3AI GATC 7 cut(s) 316, 418, 667, 728, 979, 1101, 1282
Sau96I GGNCC 5 cut(s) 127, 958, 986, 1082, 1572
ScaI AGTACT 1 cut(s) 467
SchI GAGTC 3 cut(s) 8, 935, 1636
ScrFI CCNGG 5 cut(s) 131, 395, 442, 513, 984
SduI GDGCHC 2 cut(s) 1207, 1607
SexAI ACCWGGT 1 cut(s) 511
SfaNI GCATC 1 cut(s) 469
SfcI CTRYAG 3 cut(s) 285, 595, 1530
SinI GGWCC 3 cut(s) 958, 986, 1572
SmiMI CAYNNNNRTG 1 cut(s) 966
SmlI CTYRAG 3 cut(s) 499, 692, 1403
SmoI CTYRAG 3 cut(s) 499, 692, 1403
Sse9I AATT 7 cut(s) 436, 753, 927, 990, 1348, 1388, 1513
SseBI AGGCCT 2 cut(s) 280, 907
SsiI CCGC 4 cut(s) 187, 243, 1526, 1677
SspI AATATT 1 cut(s) 1289
SspMI CTAG 5 cut(s) 276, 507, 533, 1353, 1674
StuI AGGCCT 2 cut(s) 280, 907
StyD4I CCNGG 5 cut(s) 129, 393, 440, 511, 982
StyI CCWWGG 2 cut(s) 171, 607
TaaI ACNGT 1 cut(s) 1159
TaiI ACGT 1 cut(s) 1524
TaqI TCGA 4 cut(s) 17, 400, 717, 1328
TasI AATT 7 cut(s) 436, 753, 927, 990, 1348, 1388, 1513
TatI WGTACW 2 cut(s) 40, 465
TauI GCSGC 1 cut(s) 1680
TfiI GAWTC 5 cut(s) 363, 371, 619, 1356, 1453
Tru1I TTAA 7 cut(s) 500, 546, 947, 1019, 1146, 1475, 1638
Tru9I TTAA 7 cut(s) 500, 546, 947, 1019, 1146, 1475, 1638
TscAI CASTG 2 cut(s) 210, 1162
TseFI GTSAC 2 cut(s) 554, 1159
TseI GCWGC 7 cut(s) 245, 287, 591, 721, 916, 1372, 1426
Tsp45I GTSAC 2 cut(s) 554, 1159
TspDTI ATGAA 3 cut(s) 340, 1313, 1493
TspGWI ACGGA 1 cut(s) 971
TspRI CASTG 2 cut(s) 210, 1162
Vha464I CTTAAG 1 cut(s) 499
VpaK11BI GGWCC 3 cut(s) 958, 986, 1572
XagI CCTNNNNNAGG 1 cut(s) 510
XapI RAATTY 1 cut(s) 1388
XbaI TCTAGA 2 cut(s) 532, 1352
XcmI CCANNNNNNNNNTGG 1 cut(s) 309
XmiI GTMKAC 3 cut(s) 51, 517, 889
XspI CTAG 5 cut(s) 276, 507, 533, 1353, 1674
ZrmI AGTACT 1 cut(s) 467
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.