Rh2BG532000

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0000498
Physical Location & Seq
Reverse (-)
74082277 .. 74088413
6137 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG532000.1

Sequence Viewer

Length: 1695 bp
ATGGATTTTTCAGAGTCCACAAAAGTAGTGTACAATAGGATCCAGAAGCTAGAGCCTGAAAATGTCTCTAAGATAATTGGCTATCTTCTGTTGCAAGACAATGGGGAGCGTGACATGATCCGGCTGGCTTTCAGCCCCGATAATTTGATCCAGTCTTTGATTAATAAGGCGAAAACCGAGCTATGCAAACATGCAGTGTCGTCTCCAATCTCACCTTCTCAGGTGAACCAAGTGGCTGTCTCGGACCTGCCTTTGCAATTCACTCCCTACTCTCCGAGTTTAACAAGACCGATTTCATGTCCCACAACTCTTGGAGCGGCAAATCCATTCAGTAGGGAGGCCCAAGTGCCTGGTGATCAGCAACCACTGCAAGCTGTAGACTTTATTCCACCAGGGTACTCAGATTCAGCTGCTGAAGATTATTGCCTCCAGAGTCAACAAATGCAGTTTCTGCCAGACTTTTCAAGCAATTTCTGCTATCATGAACCTGCATTGGGTGTGAGGAGTCGAAGGTCTCCGAGCTTGCCTGAGTTTCCTCTTAAGGTTTGCCATTACTTCAGTAAGGGCTTTTGCAAGCATGGAAACAACTGCAGATACTTCCATGGCCACCCCATGCCAGAGAGCTTTTCACAGTTTTTCTGCCCAAATTCAAATGTGCTTCAAAGCGATGACCATGTTGTCTCTCCTGGATCCCTTGAGAAGCTAGAGTATGAAATAATTGAGCTTCTGAAATCTCGAAGAGGGTTTCCAATATCTATTGCCTCTTTGCCAATGATGTATTATGAGAAATATGGGAGGACTCTTCAGGCCGAAGGGTACCTTACTGAGAGCCAGAGACATGGTAAGGCTGGCTATAGCCTCACAAAGCTTCTTGCTAGATTGAAAAACAGCATTCGTCTCATTGATCGGCCTCATGGACAGCACTCGGTTATATTGGCTGAAGATATTCCAAAATACTTGGAGTATACTGGCGAGAAAACTGAACCTGGTGGAATTATTGCTGGTTCTCGACAGATTTATCTCACTTTTCCAGCTGAGAGTAATTTCACTGAGCAAGATGTTTCCAACTATTTCAACAAATATGGGCCAGTTCAAGATGTGCGCATCCCATGCCAGCAGAAGAGGATGTTTGGGTTTGTCACCTTTCTTTATGCAGACACGGTGAGACATATTTTGTCGAAAGGGAATCCTCATTTTGTATGCGGGGCTCGAGTTCTGGTGAAACCTTACAGGGAGAAGTCTAGGCTTGTTGACAGGAAGTTTTCAGACAAGATGCAGCATTCTCCATGCTACAATTCACATTACATTGATGCGGATGCAGAGCTTCACTCAATGCCAAGAGTTTGTGACAGTTCAAGATTGCTAAGAAAGCAATTCATAGAAGAGCATGAGCAGGCACTTGAGTGTGAGAGAAGACGTCGCTCGGAAATGCACTTAGCAGCCAAGCCCTTGTCCCATCATCATCTCTATTATGGCTACTCCATGGATGAATTCAATCATCCAGAAGCTCATGCAGAACAAGCTGAGTTCCCATCTGCGAAGGAATTTAACATTTTGCTGGATGCTTGGAATAATGGTTCCACCAGTGAGGACAAAATTCGACACATAAACACTAATTACATTGACCACCAGGATAGCCAAGGTATTATCCTCCCAGAGAGCCCATTCGCATCTGCAATATCAACAGTTATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
OST-HTH RRM_1 zf-CCCH

Protein Analysis

564

Amino Acids

64.25

Weight (kDa)

6.56

Isoelectric Point (pI)

60.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PABC_AtC3H46 PF23182 1 - 61 4e-33 AtC3H46 PABC domain
RRM_1 PF00076 348 - 396 1.5e-06 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000498)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G05160 AT2G05160 AT2G05160
fragaria_vesca FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_6g40900 FvH4_6g40900 FvH4_6g40900 FvH4_6g40900 FvH4_6g40900 FvH4_6g40900 FvH4_6g40900
malus_domestica MD03G1188600.v1.1 MD09G1123600.v1.1 MD17G1114400.v1.1
prunus_persica Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1
pyrus_communis pycom03g14150 pycom09g04760 pycom17g10570
rosa_chinensis RchiOBHm_Chr2g0156481 RchiOBHm_Chr5g0042651
rosa_laevigata RLG00000020916 RLG00000034148
rosa_multiflora Rmu_sc0004355.1_g000004 Rmu_sc0005392.1_g000010
rosa_roxburghii Rroxscaffold_1G00037990 Rroxscaffold_2G00093000
rosa_rugosa Rorug02G0453300 Rorug02G0453400 Rorug02G0453500 Rorug02G0453600 Rorug05G0203500 Rorug05G0203500 Rorug05G0203600.1 Rorug05G0203700
rosa_samantha Rh2AG519700 Rh2BG532000 Rh2CG504700 Rh2DG541000 Rh5AG288800 Rh5BG292900 Rh5CG325300 Rh5DG302800
rosa_wichuraiana Rw2G042840 Rw5G026790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 677
AatII GACGTC 1 cut(s) 1420
Acc16I TGCGCA 1 cut(s) 1103
Acc36I ACCTGC 2 cut(s) 255, 496
Acc65I GGTACC 1 cut(s) 816
AccB1I GGYRCC 1 cut(s) 816
AccBSI CCGCTC 1 cut(s) 317
AccI GTMKAC 2 cut(s) 378, 965
AciI CCGC 3 cut(s) 317, 1203, 1313
AclWI GGATC 6 cut(s) 34, 47, 112, 142, 684, 697
AcoI YGGCCR 1 cut(s) 604
AcsI RAATTY 4 cut(s) 646, 1490, 1544, 1596
AcuI CTGAAG 4 cut(s) 435, 541, 788, 960
AcyI GRCGYC 1 cut(s) 1417
AfaI GTAC 3 cut(s) 32, 398, 818
AfiI CCNNNNNNNGG 1 cut(s) 494
AflII CTTAAG 1 cut(s) 539
AgsI TTSAA 8 cut(s) 465, 651, 662, 883, 1075, 1094, 1356, 1495
AjnI CCWGG 5 cut(s) 349, 391, 685, 985, 1629
AjuI GAANNNNNNNTTGG 2 cut(s) 199, 231
AleI CACNNNNGTG 1 cut(s) 1402
AloI GAACNNNNNNTCC 2 cut(s) 1561, 1593
Alw26I GTCTC 8 cut(s) 70, 207, 244, 519, 685, 829, 902, 1159
AlwI GGATC 6 cut(s) 34, 47, 112, 142, 684, 697
AlwNI CAGNNNCTG 2 cut(s) 413, 451
Ama87I CYCGRG 1 cut(s) 1209
AoxI GGCC 5 cut(s) 339, 604, 807, 908, 1085
ApeKI GCWGC 3 cut(s) 410, 1276, 1439
ApoI RAATTY 4 cut(s) 646, 1490, 1544, 1596
AseI ATTAAT 1 cut(s) 162
Asp700I GAANNNNTTC 1 cut(s) 945
Asp718I GGTACC 1 cut(s) 816
AspLEI GCGC 1 cut(s) 1104
AspS9I GGNCC 3 cut(s) 244, 340, 1085
AsuHPI GGTGA 6 cut(s) 204, 235, 365, 1132, 1174, 1231
AvaI CYCGRG 1 cut(s) 1209
AvaII GGWCC 1 cut(s) 244
BalI TGGCCA 1 cut(s) 606
BamHI GGATCC 2 cut(s) 39, 689
BanI GGYRCC 1 cut(s) 816
BanII GRGCYC 2 cut(s) 1210, 1664
BbsI GAAGAC 1 cut(s) 1420
BbvI GCAGC 3 cut(s) 397, 1288, 1451
BccI CCATC 2 cut(s) 1464, 1540
BciT130I CCWGG 5 cut(s) 351, 393, 687, 987, 1631
BclI TGATCA 1 cut(s) 355
BcoDI GTCTC 8 cut(s) 70, 207, 244, 519, 685, 829, 902, 1159
BfaI CTAG 4 cut(s) 50, 704, 876, 1242
BfmI CTRYAG 3 cut(s) 375, 589, 853
BfrI CTTAAG 1 cut(s) 539
BfuAI ACCTGC 2 cut(s) 255, 496
BisI GCNGC 4 cut(s) 318, 411, 1277, 1440
BlsI GCNGC 4 cut(s) 319, 412, 1278, 1441
Bme1390I CCNGG 5 cut(s) 351, 393, 687, 987, 1631
Bme18I GGWCC 1 cut(s) 244
BmeT110I CYCGRG 1 cut(s) 1209
BmgT120I GGNCC 3 cut(s) 244, 340, 1085
BmiI GGNNCC 4 cut(s) 41, 691, 818, 1579
BmrFI CCNGG 5 cut(s) 351, 393, 687, 987, 1631
BmsI GCATC 6 cut(s) 1113, 1263, 1300, 1306, 1552, 1679
BpiI GAAGAC 1 cut(s) 1420
BplI GAGNNNNNCTC 2 cut(s) 1313, 1345
BpmI CTGGAG 1 cut(s) 413
BpuEI CTTGAG 2 cut(s) 716, 1421
BsaHI GRCGYC 1 cut(s) 1417
BsaI GGTCTC 1 cut(s) 519
BsaJI CCNNGG 4 cut(s) 392, 601, 1482, 1639
Bsc4I CCNNNNNNNGG 1 cut(s) 494
Bse1I ACTGG 4 cut(s) 151, 973, 1088, 1584
BseBI CCWGG 5 cut(s) 351, 393, 687, 987, 1631
BseDI CCNNGG 4 cut(s) 392, 601, 1482, 1639
BseGI GGATG 6 cut(s) 1104, 1131, 1321, 1492, 1498, 1567
BseLI CCNNNNNNNGG 1 cut(s) 494
BseMII CTCAG 7 cut(s) 233, 414, 519, 816, 1026, 1041, 1515
BseNI ACTGG 4 cut(s) 151, 973, 1088, 1584
BseRI GAGGAG 1 cut(s) 517
BseXI GCAGC 3 cut(s) 397, 1288, 1451
BshFI GGCC 5 cut(s) 341, 606, 809, 910, 1087
BshNI GGYRCC 1 cut(s) 816
BsiHKCI CYCGRG 1 cut(s) 1209
BsiSI CCGG 1 cut(s) 121
BslFI GGGAC 2 cut(s) 285, 1438
BslI CCNNNNNNNGG 1 cut(s) 494
BsmAI GTCTC 8 cut(s) 70, 207, 244, 519, 685, 829, 902, 1159
BsmBI CGTCTC 2 cut(s) 207, 902
BsmFI GGGAC 2 cut(s) 285, 1438
BsmI GAATGC 2 cut(s) 891, 1279
BsnI GGCC 5 cut(s) 341, 606, 809, 910, 1087
Bso31I GGTCTC 1 cut(s) 519
BsoBI CYCGRG 1 cut(s) 1209
Bsp1286I GDGCHC 2 cut(s) 1210, 1664
Bsp1407I TGTACA 1 cut(s) 30
Bsp143I GATC 6 cut(s) 39, 117, 147, 355, 689, 904
Bsp19I CCATGG 2 cut(s) 601, 1482
BspACI CCGC 3 cut(s) 317, 1203, 1313
BspANI GGCC 5 cut(s) 341, 606, 809, 910, 1087
BspCNI CTCAG 7 cut(s) 232, 413, 520, 817, 1027, 1042, 1516
BspHI TCATGA 1 cut(s) 481
BspLI GGNNCC 4 cut(s) 41, 691, 818, 1579
BspMAI CTGCAG 1 cut(s) 593
BspMI ACCTGC 2 cut(s) 255, 496
BspPI GGATC 6 cut(s) 34, 47, 112, 142, 684, 697
BspQI GCTCTTC 1 cut(s) 1377
BspT107I GGYRCC 1 cut(s) 816
BspTI CTTAAG 1 cut(s) 539
BspTNI GGTCTC 1 cut(s) 519
BsrBI CCGCTC 1 cut(s) 317
BsrGI TGTACA 1 cut(s) 30
BsrI ACTGG 4 cut(s) 151, 973, 1088, 1584
BssECI CCNNGG 4 cut(s) 392, 601, 1482, 1639
BssMI GATC 6 cut(s) 39, 117, 147, 355, 689, 904
BssNAI GTATAC 1 cut(s) 966
BssNI GRCGYC 1 cut(s) 1417
BssT1I CCWWGG 3 cut(s) 601, 1482, 1639
Bst1107I GTATAC 1 cut(s) 966
Bst2UI CCWGG 5 cut(s) 351, 393, 687, 987, 1631
Bst4CI ACNGT 4 cut(s) 633, 1162, 1352, 1687
Bst6I CTCTTC 4 cut(s) 733, 807, 1115, 1377
BstACI GRCGYC 1 cut(s) 1417
BstAFI CTTAAG 1 cut(s) 539
BstAPI GCANNNNNTGC 4 cut(s) 367, 451, 474, 1110
BstAUI TGTACA 1 cut(s) 30
BstC8I GCNNGC 7 cut(s) 126, 372, 524, 575, 850, 1115, 1395
BstDSI CCRYGG 2 cut(s) 601, 1482
BstF5I GGATG 6 cut(s) 1104, 1131, 1321, 1492, 1498, 1567
BstHHI GCGC 1 cut(s) 1104
BstKTI GATC 6 cut(s) 42, 120, 150, 358, 692, 907
BstMAI GTCTC 8 cut(s) 70, 207, 244, 519, 685, 829, 902, 1159
BstMBI GATC 6 cut(s) 39, 117, 147, 355, 689, 904
BstMWI GCNNNNNNNGC 6 cut(s) 367, 451, 474, 1110, 1369, 1520
BstNI CCWGG 5 cut(s) 351, 393, 687, 987, 1631
BstNSI RCATGY 1 cut(s) 194
BstSCI CCNGG 5 cut(s) 349, 391, 685, 985, 1629
BstSFI CTRYAG 3 cut(s) 375, 589, 853
BstV1I GCAGC 3 cut(s) 397, 1288, 1451
BstV2I GAAGAC 1 cut(s) 1420
BstX2I RGATCY 2 cut(s) 39, 689
BstXI CCANNNNNNTGG 2 cut(s) 350, 839
BstYI RGATCY 2 cut(s) 39, 689
BstZ17I GTATAC 1 cut(s) 966
BsuRI GGCC 5 cut(s) 341, 606, 809, 910, 1087
BtgI CCRYGG 2 cut(s) 601, 1482
BtgZI GCGATG 1 cut(s) 681
BtsCI GGATG 6 cut(s) 1104, 1131, 1321, 1492, 1498, 1567
BtsI GCAGTG 2 cut(s) 201, 365
BtsIMutI CAGTG 4 cut(s) 201, 365, 1047, 1591
BveI ACCTGC 2 cut(s) 255, 496
Cac8I GCNNGC 7 cut(s) 126, 372, 524, 575, 850, 1115, 1395
CaiI CAGNNNCTG 2 cut(s) 413, 451
CciI TCATGA 1 cut(s) 481
CfoI GCGC 1 cut(s) 1104
Cfr13I GGNCC 3 cut(s) 244, 340, 1085
CsiI ACCWGGT 1 cut(s) 985
Csp6I GTAC 3 cut(s) 31, 397, 817
CspCI CAANNNNNGTGG 2 cut(s) 292, 327
CviQI GTAC 3 cut(s) 31, 397, 817
DpnI GATC 6 cut(s) 41, 119, 149, 357, 691, 906
DpnII GATC 6 cut(s) 39, 117, 147, 355, 689, 904
DrdI GACNNNNNNGTC 1 cut(s) 677
DseDI GACNNNNNNGTC 1 cut(s) 677
EaeI YGGCCR 1 cut(s) 604
Eam1104I CTCTTC 4 cut(s) 733, 807, 1115, 1377
EarI CTCTTC 4 cut(s) 733, 807, 1115, 1377
Eco130I CCWWGG 3 cut(s) 601, 1482, 1639
Eco24I GRGCYC 2 cut(s) 1210, 1664
Eco31I GGTCTC 1 cut(s) 519
Eco47I GGWCC 1 cut(s) 244
Eco57I CTGAAG 4 cut(s) 435, 541, 788, 960
Eco88I CYCGRG 1 cut(s) 1209
EcoRI GAATTC 1 cut(s) 1490
EcoRII CCWGG 5 cut(s) 349, 391, 685, 985, 1629
EcoT14I CCWWGG 3 cut(s) 601, 1482, 1639
EcoT38I GRGCYC 2 cut(s) 1210, 1664
ErhI CCWWGG 3 cut(s) 601, 1482, 1639
Esp3I CGTCTC 2 cut(s) 207, 902
FalI AAGNNNNNCTT 2 cut(s) 804, 836
FaqI GGGAC 2 cut(s) 285, 1438
FauI CCCGC 1 cut(s) 1196
FbaI TGATCA 1 cut(s) 355
FblI GTMKAC 2 cut(s) 378, 965
Fnu4HI GCNGC 4 cut(s) 318, 411, 1277, 1440
FokI GGATG 6 cut(s) 1091, 1138, 1328, 1485, 1499, 1574
FriOI GRGCYC 2 cut(s) 1210, 1664
Fsp4HI GCNGC 4 cut(s) 318, 411, 1277, 1440
FspAI RTGCGCAY 1 cut(s) 1103
FspBI CTAG 4 cut(s) 50, 704, 876, 1242
FspI TGCGCA 1 cut(s) 1103
GlaI GCGC 1 cut(s) 1103
GluI GCNGC 4 cut(s) 318, 411, 1277, 1440
GsuI CTGGAG 1 cut(s) 413
HaeIII GGCC 5 cut(s) 341, 606, 809, 910, 1087
HapII CCGG 1 cut(s) 121
HhaI GCGC 1 cut(s) 1104
Hin1I GRCGYC 1 cut(s) 1417
Hin6I GCGC 1 cut(s) 1102
HinP1I GCGC 1 cut(s) 1102
HincII GTYRAC 2 cut(s) 437, 1252
HindII GTYRAC 2 cut(s) 437, 1252
HindIII AAGCTT 1 cut(s) 866
HinfI GANTC 6 cut(s) 14, 404, 433, 505, 799, 1186
HpaII CCGG 1 cut(s) 121
HphI GGTGA 6 cut(s) 204, 235, 365, 1132, 1174, 1231
Hpy166II GTNNAC 7 cut(s) 18, 31, 226, 379, 437, 966, 1252
Hpy188I TCNGA 8 cut(s) 13, 244, 276, 403, 519, 729, 1267, 1426
Hpy188III TCNNGA 8 cut(s) 43, 430, 482, 735, 1008, 1094, 1356, 1502
Hpy8I GTNNAC 7 cut(s) 18, 31, 226, 379, 437, 966, 1252
Hpy99I CGWCG 1 cut(s) 1422
HpyAV CCTTC 4 cut(s) 225, 504, 806, 1534
HpyCH4III ACNGT 4 cut(s) 633, 1162, 1352, 1687
HpyCH4IV ACGT 1 cut(s) 1417
HpyF10VI GCNNNNNNNGC 6 cut(s) 367, 451, 474, 1110, 1369, 1520
HpySE526I ACGT 1 cut(s) 1417
Hsp92I GRCGYC 1 cut(s) 1417
HspAI GCGC 1 cut(s) 1102
KpnI GGTACC 1 cut(s) 820
Ksp22I TGATCA 1 cut(s) 355
Kzo9I GATC 6 cut(s) 39, 117, 147, 355, 689, 904
LguI GCTCTTC 1 cut(s) 1377
LmnI GCTCC 2 cut(s) 106, 314
Lsp1109I GCAGC 3 cut(s) 397, 1288, 1451
LweI GCATC 6 cut(s) 1113, 1263, 1300, 1306, 1552, 1679
MabI ACCWGGT 1 cut(s) 985
MaeI CTAG 4 cut(s) 50, 704, 876, 1242
MaeII ACGT 1 cut(s) 1417
MaeIII GTNAC 3 cut(s) 110, 1138, 1346
MalI GATC 6 cut(s) 41, 119, 149, 357, 691, 906
MbiI CCGCTC 1 cut(s) 317
MboI GATC 6 cut(s) 39, 117, 147, 355, 689, 904
MboII GAAGA 8 cut(s) 77, 428, 750, 794, 953, 1132, 1394, 1425
MflI RGATCY 2 cut(s) 39, 689
MhlI GDGCHC 2 cut(s) 1210, 1664
MlsI TGGCCA 1 cut(s) 606
MluNI TGGCCA 1 cut(s) 606
MlyI GAGTC 4 cut(s) 23, 442, 514, 793
MmeI TCCRAC 1 cut(s) 1089
Mox20I TGGCCA 1 cut(s) 606
MroXI GAANNNNTTC 1 cut(s) 945
MscI TGGCCA 1 cut(s) 606
MseI TTAA 4 cut(s) 162, 281, 540, 1548
MslI CAYNNNNRTG 1 cut(s) 1402
Msp20I TGGCCA 1 cut(s) 606
MspA1I CMGCKG 2 cut(s) 410, 1034
MspCI CTTAAG 1 cut(s) 539
MspI CCGG 1 cut(s) 121
MspR9I CCNGG 5 cut(s) 351, 393, 687, 987, 1631
Mva1269I GAATGC 2 cut(s) 891, 1279
MvaI CCWGG 5 cut(s) 351, 393, 687, 987, 1631
MwoI GCNNNNNNNGC 6 cut(s) 367, 451, 474, 1110, 1369, 1520
NcoI CCATGG 2 cut(s) 601, 1482
NdeII GATC 6 cut(s) 39, 117, 147, 355, 689, 904
NlaIV GGNNCC 4 cut(s) 41, 691, 818, 1579
NmuCI GTSAC 3 cut(s) 110, 1138, 1346
NsbI TGCGCA 1 cut(s) 1103
NspI RCATGY 1 cut(s) 194
OliI CACNNNNGTG 1 cut(s) 1402
PaeR7I CTCGAG 1 cut(s) 1209
PagI TCATGA 1 cut(s) 481
PciSI GCTCTTC 1 cut(s) 1377
PctI GAATGC 2 cut(s) 891, 1279
PdmI GAANNNNTTC 1 cut(s) 945
PfeI GAWTC 2 cut(s) 404, 1186
PfoI TCCNGGA 1 cut(s) 685
PkrI GCNGC 4 cut(s) 319, 412, 1278, 1441
PleI GAGTC 4 cut(s) 22, 441, 513, 793
PpsI GAGTC 4 cut(s) 22, 441, 513, 793
PshBI ATTAAT 1 cut(s) 162
Psp6I CCWGG 5 cut(s) 349, 391, 685, 985, 1629
PspGI CCWGG 5 cut(s) 349, 391, 685, 985, 1629
PspN4I GGNNCC 4 cut(s) 41, 691, 818, 1579
PspPI GGNCC 3 cut(s) 244, 340, 1085
PspXI VCTCGAGB 1 cut(s) 1209
PstI CTGCAG 1 cut(s) 593
PstNI CAGNNNCTG 2 cut(s) 413, 451
PsuI RGATCY 2 cut(s) 39, 689
PvuII CAGCTG 2 cut(s) 410, 1034
RsaI GTAC 3 cut(s) 32, 398, 818
RsaNI GTAC 3 cut(s) 31, 397, 817
RseI CAYNNNNRTG 1 cut(s) 1402
SapI GCTCTTC 1 cut(s) 1377
SaqAI TTAA 4 cut(s) 162, 281, 540, 1548
SatI GCNGC 4 cut(s) 318, 411, 1277, 1440
Sau3AI GATC 6 cut(s) 39, 117, 147, 355, 689, 904
Sau96I GGNCC 3 cut(s) 244, 340, 1085
SchI GAGTC 4 cut(s) 23, 442, 514, 793
ScrFI CCNGG 5 cut(s) 351, 393, 687, 987, 1631
SduI GDGCHC 2 cut(s) 1210, 1664
SexAI ACCWGGT 1 cut(s) 985
SfaNI GCATC 6 cut(s) 1113, 1263, 1300, 1306, 1552, 1679
SfcI CTRYAG 3 cut(s) 375, 589, 853
Sfr274I CTCGAG 1 cut(s) 1209
SinI GGWCC 1 cut(s) 244
SlaI CTCGAG 1 cut(s) 1209
SmiMI CAYNNNNRTG 1 cut(s) 1402
SmlI CTYRAG 4 cut(s) 539, 695, 1209, 1400
SmoI CTYRAG 4 cut(s) 539, 695, 1209, 1400
SsiI CCGC 3 cut(s) 317, 1203, 1313
SspMI CTAG 4 cut(s) 50, 704, 876, 1242
StyD4I CCNGG 5 cut(s) 349, 391, 685, 985, 1629
StyI CCWWGG 3 cut(s) 601, 1482, 1639
TaaI ACNGT 4 cut(s) 633, 1162, 1352, 1687
TaiI ACGT 1 cut(s) 1420
TaqI TCGA 6 cut(s) 508, 736, 1009, 1178, 1210, 1600
TaqII GACCGA 1 cut(s) 304
TatI WGTACW 1 cut(s) 30
TauI GCSGC 1 cut(s) 320
TfiI GAWTC 2 cut(s) 404, 1186
Tru1I TTAA 4 cut(s) 162, 281, 540, 1548
Tru9I TTAA 4 cut(s) 162, 281, 540, 1548
TscAI CASTG 4 cut(s) 201, 372, 1054, 1591
TseFI GTSAC 3 cut(s) 110, 1138, 1346
TseI GCWGC 3 cut(s) 410, 1276, 1439
Tsp45I GTSAC 3 cut(s) 110, 1138, 1346
TspDTI ATGAA 5 cut(s) 285, 498, 726, 1366, 1503
TspRI CASTG 4 cut(s) 201, 372, 1054, 1591
Vha464I CTTAAG 1 cut(s) 539
VpaK11BI GGWCC 1 cut(s) 244
VspI ATTAAT 1 cut(s) 162
XapI RAATTY 4 cut(s) 646, 1490, 1544, 1596
XceI RCATGY 1 cut(s) 194
XhoI CTCGAG 1 cut(s) 1209
XmiI GTMKAC 2 cut(s) 378, 965
XmnI GAANNNNTTC 1 cut(s) 945
XspI CTAG 4 cut(s) 50, 704, 876, 1242
ZraI GACGTC 1 cut(s) 1418
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.