MD03G1188600.v1.1

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
OG0000498
Physical Location & Seq
Forward (+)
25820658 .. 25823358
2701 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1188600.v1.1.491

Sequence Viewer

Length: 1662 bp
ATGATGGATTTTTCTGTGTCCACAACCGCTGTTTACAATAGAATCCAGAAACTAGAACCCGAAAATGCTACGAAGATTATTGGCTTTCTTCTTTTACAAGACCATGGCGAGCAGGACATGGCTCGGTTGGCTATGGCTCCGGAACACTTGATTCACCAAGTGATACTGACAGCCAAGGCTGAACTTCAGCAGTTGGCTACCAAATCAGTGTCATCCCCACTTTCACCTTCCTTTAACCGGACAACAGGTGCTTTCGCACCTTATTCGCCTATTTCGTCAAGGCATTTCTCATCTCCGGCAGCCTTTCAAGTCCCAACTTCATTTTGGGATCGGCAACTAATTGATAGGCACAGCTCGGATTTTATGCCATTGGGTTACCCTGACTCTATTACTGTGCTGCAAAACCAGGCTCAGTTTTTTAGTTTGGAGGATCAAATGGAATCAGTTAATTCTGAGATTTCAGGATTCTCTAACGATTACTTTTACAGGGATGCTGAAATGTGCAGCTTAAGTGCTAGAAATGGTAGAAGGATTTCAAACCTCGGTGATTTTCAAGTTAAGATATGTCACTATTTCAATAAGGGCTTTTGTAAGCATGGAAGTAGCTGTAGGTATTACCATGGACAATTGATTTCTGATAGCTTCTATGGAAATGATGGCCTTAATGATGATCATGTTTTGTCACCGGGGTCTCGTGAGAAGTTGGAGTGGGAAATCACCGAGCTTCTTCGATCAAGAAGAGGGATTCCTATTTCAATTGCTTCTCTGCCAATGATGTATTATGAGAGATATGGAAAATCTCTTCAGGCAGAAGGCTACCTAACTGAAAGCCAGAGACATGGCAAGGCTGGTTACAGTTTGACAAAGCTTCTCGCTCGACTTGGAAACAGTATTCGGCTGATTGACAGGCCTCATGGGCAGCATGCTGTAATTTTGTCGGAAGACTCTGCAAAATACATGGAAAATCGGAATGAGAAAGGTGATCCTGGTCCTATTGTTAGCGGTTCGCGACAAATTTATCTAACGTTTCCATCCGAGAGCACTTTCAGTGAAGATGAAGTCTCAAACTACTTCAACACTTTTGGTCCTGTTGAAGATGTAAGAATTCCATGCCAACAGAAAAGGATGTTCGGGTTTGTAACCTTTGTCCATGCCGATACTGCGAAAACAATTTTGGTAAAGGGAAATCCGCATTATGTTTGTGGGGCTCGTGTTCTCGTGAAGCCTTACAGGGAAAAATCAAAGCTTGTTGATAGAAAGTACCAAGAGAGAATGGAACCTACAGCATATTATTCTCCGCACTATACAGACATGGAATCCGAGTTTTATTCGATGTCAAGAAGCTGTGATAACTCTAGATTGTTAAGGAAGAAGCTTTTGGAGGAACAAGAATATGCACTTGAAATAGAGAGGAGGCTGGCAGAGCTGCGTTTTGTGCAAAAGCCTGTGGCCAGTCAGCCGCAATCTAGTTACTTCATGGATGGGCTAAAAGTATCAGAAGATAATTTCAACTTCCCGTCTGCAGAATGTTTCAATAATCTGTTGTATGCTCTAAACAGTGGGTCTACAAGTGATGATAAACCCAAGCACACAGAAACCAATTACACTGACCATGATAGTCAAGGACTTAATCTCCCGGATAGCCCGTTTGCAACACGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
OST-HTH RRM_1 zf-CCCH

Protein Analysis

554

Amino Acids

63.01

Weight (kDa)

6.21

Isoelectric Point (pI)

54.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PABC_AtC3H46 PF23182 2 - 66 2.3e-29 AtC3H46 PABC domain
RRM_1 PF00076 349 - 396 2.1e-06 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000498)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G05160 AT2G05160 AT2G05160
fragaria_vesca FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_3g24070 FvH4_6g40900 FvH4_6g40900 FvH4_6g40900 FvH4_6g40900 FvH4_6g40900 FvH4_6g40900 FvH4_6g40900
malus_domestica MD03G1188600.v1.1 MD09G1123600.v1.1 MD17G1114400.v1.1
prunus_persica Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.3G200500_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1 Prupe.4G234600_v2.0.a1
pyrus_communis pycom03g14150 pycom09g04760 pycom17g10570
rosa_chinensis RchiOBHm_Chr2g0156481 RchiOBHm_Chr5g0042651
rosa_laevigata RLG00000020916 RLG00000034148
rosa_multiflora Rmu_sc0004355.1_g000004 Rmu_sc0005392.1_g000010
rosa_roxburghii Rroxscaffold_1G00037990 Rroxscaffold_2G00093000
rosa_rugosa Rorug02G0453300 Rorug02G0453400 Rorug02G0453500 Rorug02G0453600 Rorug05G0203500 Rorug05G0203500 Rorug05G0203600.1 Rorug05G0203700
rosa_samantha Rh2AG519700 Rh2BG532000 Rh2CG504700 Rh2DG541000 Rh5AG288800 Rh5BG292900 Rh5CG325300 Rh5DG302800
rosa_wichuraiana Rw2G042840 Rw5G026790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 1565
AccII CGCG 1 cut(s) 1009
AccIII TCCGGA 1 cut(s) 139
AciI CCGC 5 cut(s) 27, 1002, 1190, 1298, 1460
AclI AACGTT 1 cut(s) 1025
AclWI GGATC 3 cut(s) 336, 438, 977
AcoI YGGCCR 1 cut(s) 1449
AcsI RAATTY 2 cut(s) 1014, 1104
AcuI CTGAAG 2 cut(s) 170, 788
AdeI CACNNNGTG 1 cut(s) 160
AfaI GTAC 1 cut(s) 1262
AfiI CCNNNNNNNGG 1 cut(s) 237
AflII CTTAAG 1 cut(s) 508
AjnI CCWGG 2 cut(s) 405, 985
AjuI GAANNNNNNNTTGG 4 cut(s) 1157, 1189, 1361, 1393
Alw21I GWGCWC 1 cut(s) 1043
Alw26I GTCTC 3 cut(s) 696, 829, 1066
AlwI GGATC 3 cut(s) 336, 438, 977
Aor13HI TCCGGA 1 cut(s) 139
AoxI GGCC 3 cut(s) 658, 908, 1449
ApeKI GCWGC 5 cut(s) 299, 397, 504, 919, 1426
ApoI RAATTY 2 cut(s) 1014, 1104
Asp700I GAANNNNTTC 1 cut(s) 532
AspS9I GGNCC 2 cut(s) 989, 1085
AsuC2I CCSGG 2 cut(s) 687, 1637
AsuHPI GGTGA 6 cut(s) 146, 216, 557, 675, 709, 992
AvaII GGWCC 2 cut(s) 989, 1085
BalI TGGCCA 1 cut(s) 1451
BanII GRGCYC 1 cut(s) 1210
BauI CACGAG 3 cut(s) 693, 1209, 1217
BbsI GAAGAC 1 cut(s) 948
Bbv12I GWGCWC 1 cut(s) 1043
BbvI GCAGC 5 cut(s) 311, 384, 516, 931, 1413
BccI CCATC 3 cut(s) 650, 1039, 1475
BcgI CGANNNNNNTGC 2 cut(s) 246, 280
BciT130I CCWGG 2 cut(s) 407, 987
BclI TGATCA 1 cut(s) 670
BcnI CCSGG 2 cut(s) 687, 1637
BcoDI GTCTC 3 cut(s) 696, 829, 1066
BfaI CTAG 4 cut(s) 53, 516, 1356, 1467
BfmI CTRYAG 3 cut(s) 607, 1281, 1521
BfrI CTTAAG 1 cut(s) 508
BglI GCCNNNNNGGC 1 cut(s) 916
BisI GCNGC 6 cut(s) 300, 398, 505, 920, 1427, 1460
BlsI GCNGC 6 cut(s) 301, 399, 506, 921, 1428, 1461
Bme1390I CCNGG 4 cut(s) 407, 687, 987, 1637
Bme18I GGWCC 2 cut(s) 989, 1085
BmgT120I GGNCC 2 cut(s) 989, 1085
BmiI GGNNCC 2 cut(s) 138, 1278
BmrFI CCNGG 4 cut(s) 407, 687, 987, 1637
BmsI GCATC 1 cut(s) 481
BpiI GAAGAC 1 cut(s) 948
BpuMI CCSGG 2 cut(s) 687, 1637
BsaI GGTCTC 1 cut(s) 696
BsaJI CCNNGG 5 cut(s) 103, 174, 541, 619, 686
BsaWI WCCGGW 2 cut(s) 139, 237
BsaXI ACNNNNNCTCC 2 cut(s) 1617, 1647
Bsc4I CCNNNNNNNGG 1 cut(s) 237
Bse1I ACTGG 1 cut(s) 1452
BseAI TCCGGA 1 cut(s) 139
BseBI CCWGG 2 cut(s) 407, 987
BseDI CCNNGG 5 cut(s) 103, 174, 541, 619, 686
BseGI GGATG 5 cut(s) 212, 496, 1031, 1131, 1486
BseLI CCNNNNNNNGG 1 cut(s) 237
BseMII CTCAG 2 cut(s) 425, 444
BseNI ACTGG 1 cut(s) 1452
BseRI GAGGAG 1 cut(s) 1426
BseXI GCAGC 5 cut(s) 311, 384, 516, 931, 1413
BsgI GTGCAG 1 cut(s) 523
Bsh1236I CGCG 1 cut(s) 1009
BshFI GGCC 3 cut(s) 660, 910, 1451
BsiHKAI GWGCWC 1 cut(s) 1043
BsiSI CCGG 5 cut(s) 140, 238, 296, 686, 1637
BslFI GGGAC 1 cut(s) 296
BslI CCNNNNNNNGG 1 cut(s) 237
BsmAI GTCTC 3 cut(s) 696, 829, 1066
BsmFI GGGAC 1 cut(s) 296
BsnI GGCC 3 cut(s) 660, 910, 1451
Bso31I GGTCTC 1 cut(s) 696
Bsp1286I GDGCHC 2 cut(s) 1043, 1210
Bsp13I TCCGGA 1 cut(s) 139
Bsp143I GATC 5 cut(s) 328, 430, 670, 731, 982
Bsp19I CCATGG 2 cut(s) 103, 619
Bsp68I TCGCGA 1 cut(s) 1009
BspACI CCGC 5 cut(s) 27, 1002, 1190, 1298, 1460
BspANI GGCC 3 cut(s) 660, 910, 1451
BspCNI CTCAG 2 cut(s) 424, 445
BspEI TCCGGA 1 cut(s) 139
BspFNI CGCG 1 cut(s) 1009
BspLI GGNNCC 2 cut(s) 138, 1278
BspMAI CTGCAG 1 cut(s) 1525
BspPI GGATC 3 cut(s) 336, 438, 977
BspTI CTTAAG 1 cut(s) 508
BspTNI GGTCTC 1 cut(s) 696
BsrI ACTGG 1 cut(s) 1452
BssECI CCNNGG 5 cut(s) 103, 174, 541, 619, 686
BssMI GATC 5 cut(s) 328, 430, 670, 731, 982
BssSI CACGAG 3 cut(s) 693, 1209, 1217
BssT1I CCWWGG 3 cut(s) 103, 174, 619
Bst2BI CACGAG 3 cut(s) 693, 1209, 1217
Bst2UI CCWGG 2 cut(s) 407, 987
Bst4CI ACNGT 4 cut(s) 394, 857, 890, 1559
Bst6I CTCTTC 2 cut(s) 733, 807
BstAFI CTTAAG 1 cut(s) 508
BstC8I GCNNGC 3 cut(s) 110, 924, 1419
BstDEI CTNAG 2 cut(s) 411, 453
BstDSI CCRYGG 2 cut(s) 103, 619
BstEII GGTNACC 1 cut(s) 374
BstF5I GGATG 5 cut(s) 212, 496, 1031, 1131, 1486
BstFNI CGCG 1 cut(s) 1009
BstKTI GATC 5 cut(s) 331, 433, 673, 734, 985
BstMAI GTCTC 3 cut(s) 696, 829, 1066
BstMBI GATC 5 cut(s) 328, 430, 670, 731, 982
BstMWI GCNNNNNNNGC 5 cut(s) 128, 916, 1160, 1423, 1435
BstNI CCWGG 2 cut(s) 407, 987
BstNSI RCATGY 1 cut(s) 926
BstPI GGTNACC 1 cut(s) 374
BstSCI CCNGG 4 cut(s) 405, 685, 985, 1635
BstSFI CTRYAG 3 cut(s) 607, 1281, 1521
BstUI CGCG 1 cut(s) 1009
BstV1I GCAGC 5 cut(s) 311, 384, 516, 931, 1413
BstV2I GAAGAC 1 cut(s) 948
BstXI CCANNNNNNTGG 1 cut(s) 839
BsuRI GGCC 3 cut(s) 660, 910, 1451
BtgI CCRYGG 2 cut(s) 103, 619
BtsCI GGATG 5 cut(s) 212, 496, 1031, 1131, 1486
BtsIMutI CAGTG 4 cut(s) 213, 1054, 1564, 1605
BtuMI TCGCGA 1 cut(s) 1009
Cac8I GCNNGC 3 cut(s) 110, 924, 1419
Cfr13I GGNCC 2 cut(s) 989, 1085
Csp6I GTAC 1 cut(s) 1261
CviQI GTAC 1 cut(s) 1261
DdeI CTNAG 2 cut(s) 411, 453
DpnI GATC 5 cut(s) 330, 432, 672, 733, 984
DpnII GATC 5 cut(s) 328, 430, 670, 731, 982
DraIII CACNNNGTG 1 cut(s) 160
EaeI YGGCCR 1 cut(s) 1449
Eam1104I CTCTTC 2 cut(s) 733, 807
EarI CTCTTC 2 cut(s) 733, 807
Eco130I CCWWGG 3 cut(s) 103, 174, 619
Eco147I AGGCCT 1 cut(s) 910
Eco24I GRGCYC 1 cut(s) 1210
Eco31I GGTCTC 1 cut(s) 696
Eco47I GGWCC 2 cut(s) 989, 1085
Eco57I CTGAAG 2 cut(s) 170, 788
Eco91I GGTNACC 1 cut(s) 374
EcoO65I GGTNACC 1 cut(s) 374
EcoRI GAATTC 1 cut(s) 1104
EcoRII CCWGG 2 cut(s) 405, 985
EcoT14I CCWWGG 3 cut(s) 103, 174, 619
EcoT38I GRGCYC 1 cut(s) 1210
ErhI CCWWGG 3 cut(s) 103, 174, 619
FaqI GGGAC 1 cut(s) 296
FbaI TGATCA 1 cut(s) 670
FblI GTMKAC 1 cut(s) 1565
Fnu4HI GCNGC 6 cut(s) 300, 398, 505, 920, 1427, 1460
FokI GGATG 5 cut(s) 199, 503, 1018, 1138, 1493
FriOI GRGCYC 1 cut(s) 1210
Fsp4HI GCNGC 6 cut(s) 300, 398, 505, 920, 1427, 1460
FspBI CTAG 4 cut(s) 53, 516, 1356, 1467
GluI GCNGC 6 cut(s) 300, 398, 505, 920, 1427, 1460
HaeIII GGCC 3 cut(s) 660, 910, 1451
HapII CCGG 5 cut(s) 140, 238, 296, 686, 1637
HindIII AAGCTT 3 cut(s) 866, 1244, 1373
HinfI GANTC 8 cut(s) 42, 151, 383, 440, 465, 745, 944, 1316
HpaII CCGG 5 cut(s) 140, 238, 296, 686, 1637
HphI GGTGA 6 cut(s) 146, 216, 557, 675, 709, 992
Hpy166II GTNNAC 3 cut(s) 21, 34, 1566
Hpy188I TCNGA 8 cut(s) 358, 454, 637, 940, 969, 1036, 1321, 1498
Hpy188III TCNNGA 9 cut(s) 46, 140, 462, 695, 735, 1008, 1219, 1338, 1356
Hpy8I GTNNAC 3 cut(s) 21, 34, 1566
HpyAV CCTTC 3 cut(s) 237, 522, 806
HpyCH4III ACNGT 4 cut(s) 394, 857, 890, 1559
HpyCH4IV ACGT 1 cut(s) 1025
HpyCH4V TGCA 7 cut(s) 400, 504, 950, 1397, 1438, 1523, 1652
HpyF10VI GCNNNNNNNGC 5 cut(s) 128, 916, 1160, 1423, 1435
HpyF3I CTNAG 2 cut(s) 411, 453
HpySE526I ACGT 1 cut(s) 1025
Kpn2I TCCGGA 1 cut(s) 139
Ksp22I TGATCA 1 cut(s) 670
Kzo9I GATC 5 cut(s) 328, 430, 670, 731, 982
LmnI GCTCC 1 cut(s) 142
Lsp1109I GCAGC 5 cut(s) 311, 384, 516, 931, 1413
LweI GCATC 1 cut(s) 481
MaeI CTAG 4 cut(s) 53, 516, 1356, 1467
MaeII ACGT 1 cut(s) 1025
MaeIII GTNAC 6 cut(s) 374, 566, 681, 851, 1138, 1469
MalI GATC 5 cut(s) 330, 432, 672, 733, 984
MboI GATC 5 cut(s) 328, 430, 670, 731, 982
MfeI CAATTG 2 cut(s) 626, 756
MhlI GDGCHC 2 cut(s) 1043, 1210
MlsI TGGCCA 1 cut(s) 1451
MluNI TGGCCA 1 cut(s) 1451
MlyI GAGTC 2 cut(s) 377, 938
MmeI TCCRAC 2 cut(s) 684, 918
MnlI CCTC 7 cut(s) 421, 551, 734, 921, 1375, 1404, 1407
Mox20I TGGCCA 1 cut(s) 1451
MroI TCCGGA 1 cut(s) 139
MroXI GAANNNNTTC 1 cut(s) 532
MscI TGGCCA 1 cut(s) 1451
MseI TTAA 7 cut(s) 234, 447, 509, 558, 663, 1364, 1629
Msp20I TGGCCA 1 cut(s) 1451
MspA1I CMGCKG 1 cut(s) 29
MspCI CTTAAG 1 cut(s) 508
MspI CCGG 5 cut(s) 140, 238, 296, 686, 1637
MspR9I CCNGG 4 cut(s) 407, 687, 987, 1637
MunI CAATTG 2 cut(s) 626, 756
MvaI CCWGG 2 cut(s) 407, 987
MvnI CGCG 1 cut(s) 1009
MwoI GCNNNNNNNGC 5 cut(s) 128, 916, 1160, 1423, 1435
NciI CCSGG 2 cut(s) 687, 1637
NcoI CCATGG 2 cut(s) 103, 619
NdeII GATC 5 cut(s) 328, 430, 670, 731, 982
NlaIV GGNNCC 2 cut(s) 138, 1278
NmuCI GTSAC 2 cut(s) 566, 681
NruI TCGCGA 1 cut(s) 1009
NspI RCATGY 1 cut(s) 926
PaeI GCATGC 1 cut(s) 926
PceI AGGCCT 1 cut(s) 910
PcsI WCGNNNNNNNCGW 1 cut(s) 272
PdmI GAANNNNTTC 1 cut(s) 532
PfeI GAWTC 6 cut(s) 42, 151, 440, 465, 745, 1316
PfoI TCCNGGA 1 cut(s) 1635
PkrI GCNGC 6 cut(s) 301, 399, 506, 921, 1428, 1461
PleI GAGTC 2 cut(s) 377, 938
PpsI GAGTC 2 cut(s) 377, 938
Psp1406I AACGTT 1 cut(s) 1025
Psp6I CCWGG 2 cut(s) 405, 985
PspEI GGTNACC 1 cut(s) 374
PspGI CCWGG 2 cut(s) 405, 985
PspN4I GGNNCC 2 cut(s) 138, 1278
PspPI GGNCC 2 cut(s) 989, 1085
PstI CTGCAG 1 cut(s) 1525
RruI TCGCGA 1 cut(s) 1009
RsaI GTAC 1 cut(s) 1262
RsaNI GTAC 1 cut(s) 1261
SaqAI TTAA 7 cut(s) 234, 447, 509, 558, 663, 1364, 1629
SatI GCNGC 6 cut(s) 300, 398, 505, 920, 1427, 1460
Sau3AI GATC 5 cut(s) 328, 430, 670, 731, 982
Sau96I GGNCC 2 cut(s) 989, 1085
SchI GAGTC 2 cut(s) 377, 938
ScrFI CCNGG 4 cut(s) 407, 687, 987, 1637
SduI GDGCHC 2 cut(s) 1043, 1210
SfaNI GCATC 1 cut(s) 481
SfcI CTRYAG 3 cut(s) 607, 1281, 1521
SinI GGWCC 2 cut(s) 989, 1085
SmlI CTYRAG 1 cut(s) 508
SmoI CTYRAG 1 cut(s) 508
SphI GCATGC 1 cut(s) 926
SseBI AGGCCT 1 cut(s) 910
SsiI CCGC 5 cut(s) 27, 1002, 1190, 1298, 1460
SspMI CTAG 4 cut(s) 53, 516, 1356, 1467
StuI AGGCCT 1 cut(s) 910
StyD4I CCNGG 4 cut(s) 405, 685, 985, 1635
StyI CCWWGG 3 cut(s) 103, 174, 619
TaaI ACNGT 4 cut(s) 394, 857, 890, 1559
TaiI ACGT 1 cut(s) 1028
TaqI TCGA 3 cut(s) 730, 877, 1331
TauI GCSGC 1 cut(s) 1462
TfiI GAWTC 6 cut(s) 42, 151, 440, 465, 745, 1316
Tru1I TTAA 7 cut(s) 234, 447, 509, 558, 663, 1364, 1629
Tru9I TTAA 7 cut(s) 234, 447, 509, 558, 663, 1364, 1629
TscAI CASTG 4 cut(s) 213, 1054, 1564, 1612
TseFI GTSAC 2 cut(s) 566, 681
TseI GCWGC 5 cut(s) 299, 397, 504, 919, 1426
Tsp45I GTSAC 2 cut(s) 566, 681
TspDTI ATGAA 3 cut(s) 309, 1071, 1465
TspRI CASTG 4 cut(s) 213, 1054, 1564, 1612
Vha464I CTTAAG 1 cut(s) 508
VpaK11BI GGWCC 2 cut(s) 989, 1085
XapI RAATTY 2 cut(s) 1014, 1104
XbaI TCTAGA 1 cut(s) 1355
XceI RCATGY 1 cut(s) 926
XcmI CCANNNNNNNNNTGG 1 cut(s) 321
XmiI GTMKAC 1 cut(s) 1565
XmnI GAANNNNTTC 1 cut(s) 532
XspI CTAG 4 cut(s) 53, 516, 1356, 1467
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.