Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0002309

Physical Location & Seq

Genomic Coordinates Forward (+)

27157059 .. 27161216

Gene Structure 4158 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g32000.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2136 bp

ATGGAGAAAACATTAGATCCTCAGCTATGGCACGCCTGCGCCGGCGGCATGGTCCAAATGCCACCGGTGAACTCCAAAGTCTTCTACTTTCCACAAGGCCACGCCGAGCACGCACAAACCCACGTAGACTTCCCGGCCTCCGTCAGAATCCCATCTCTCATTCTCTGCCGGGTCGCCGGAATCCGATACATGGCCGACCCTGAAACCGACGAGGTCTTGGCCAGAATCCGGCTGGTCCCTTCTGAGACCAACGAGCTTTATAATGACGAAGGCCCTGTGGACTCTGATGGGTCTGATAATCAAGAAAAGTCTTCATCTTTCGCTAAGACTCTGACTCAGTCCGACGCCAACAACGGCGGCGGGTTCTCGGTTCCGAGGTACTGCGCTGAGACCATTTTCCCGAGGCTGGACTACTCCGCCGACCCGCCGGTGCAGACGGTGATCGCCAAGGACGTTCACGGCGAGGTGTGGAAGTTCCGGCACATTTACCGGGGCACGCCTCGCCGGCATTTGCTGACCACCGGGTGGAGCACGTTCGTCAACCAGAAGAAGCTCGTCGCCGGCGACTCCATTGTGTTTTTACGTTCCGAAAACGGCGACCTCTGCGTCGGGATTCGGAGGGCCAAGAGGGGTCTGCTGGAGGGTTCGCCGGAGTCGGTGTCGGCGGCGTCCGGGTGGAACCACGGCCGTTCCGGTGGGCCCCCGTATTCGGGGTTCTCGGTGTTTCTGAAAGAGGAGGAGAGTAAAATGGGGAGGAATGGGTTTGGGAATTCTAGTGAGAGTGGGAATGTGAGAGGGGGCAGAGGAGGAGTAGGAGGAGGAAGAGTGAGGCCTGAGGCTGTGGTGGAGGCTGCTAGTCTTGCGGAGAAAGGGCAGCCGTTTGAGGTGGTTTTTTATCCGAGGGCGAGCACGCCGGAGTTTTGTGTGAAGGCGTCTGCGGTGAGGGCGGCGGTGAGGGTGCAGTGGTGCTCAGGGATGAGGTTTAAAATGGCTTTTGAGACTGAGGACTGTTCTAGGATTAGTTGGTTCATGGGAACCATAACTTCTGTTCAGGTTAATGATAAAATCCGCTGGCCTAATTCTCCTTGGAGAGTTCTACAGGTGACATGGGATGAGCCAGATTTGTTACAGAATGTGAAGTGTGTTAGCCCATGGTTGATTGAGCTGGTATCAAATTTCCCCATTATCCATATGGCGCCCTTTTCACCGCCACGGAAGAAGTTGCGTATACTGCAACACCCAGACTTTACTCTTGACAGGCAGTTAACGTTGCCATCATTTTCAGGCAACCCCCTCGGGTCCAGCAGCCCCATGTGTTGTCTACCAGATAACACTCCTGCAGGCATACAGGGAGCCAGGCATGCTCAACTTAGAATATCTTTAACTAATCTCCACTTTAACAGCAAACTGCAGTCGGGGCTGTTCTCGTCCAGTTTCCAGAGGTTCGATCAAAATTCTAGAATTCCCAATGGCATCAGGAATGGCGACACAAACAGCAACGAAAGCCTATCTTGCTCGCTAACAATGGGAAATTCTATTCAGAACTTGGAGAAATCTGATAATGTGAAGAAACACCAGTTTTTACTCTTTGGTCAACCAATACTTACTGAGCAGCAGATGTCTCGTAGCTGCTCCAGTGATGCAGTTTCTCAGGTTCTTGCTGGTAAGAATTTGAAAGATGAGAATCAGGGCAGAAAAAGGTTTCTATCTGTTGGTTCAGACTCTGCTATTGAGCACTGGGGTTCACTAGAGAAATCTGCACTGAACAAAGAATTACATGTTTTAGACTTGGATACCGGTCATTGCAAGGTATTCATGGAGTCCGAGGATGTTGGAAGGACTCTTGACCTCTCAGCTCTGGGCTCTTATGATGAGTTAGACAGGAGGCTGACCATCATGTTTGGATTAGAAAAACCAGAGATGCTGAGCCATGTTCTTTACCGAGATCCAACAGGTGTTGTTAAACAAACAGGAGATGAACCATTCGGTATTTTTAAGAAAGCAGCAAAGAGACTGACTATTCTAACATGTCCGGCAAATGAAACTATTGGGAGGACATGGATTAGAGGAATGGAAAATGCTGGAAATGGACTTGGTGCATCAAATAAGACAGGTCCATTAAGCATATTTGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Auxin_resp B3

Protein Analysis

712

Amino Acids

78.37

Weight (kDa)

8.29

Isoelectric Point (pI)

44.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B3	PF02362	107 - 208	1.4e-23	B3 DNA binding domain
BRWD_AD	PF25313	291 - 390	2.4e-08	BRWD/PHIP ancillary domain-like domain
ARF_AD	PF06507	307 - 390	9.1e-34	Auxin response factor ancillary domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002309)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G28350 AT2G28350
fragaria_vesca	FvH4_3g32000 FvH4_3g32000 FvH4_6g15960 FvH4_6g15960 FvH4_6g15960
malus_domestica	MD03G1119500.v1.1 MD03G1119700.v1.1 MD04G1096900.v1.1
prunus_persica	Prupe.6G102800_v2.0.a1 Prupe.6G102800_v2.0.a1 Prupe.6G102800_v2.0.a1 Prupe.6G236200_v2.0.a1 Prupe.6G236200_v2.0.a1 Prupe.6G236200_v2.0.a1
pyrus_communis	pycom04g09200 pycom11g11370 pycom12g11700
rosa_chinensis	RchiOBHm_Chr3g0469661 RchiOBHm_Chr5g0058761
rosa_laevigata	RLG00000024330 RLG00000035245
rosa_multiflora	Rmu_sc0000367.1_g000238 Rmu_sc0006483.1_g000023 Rmu_sc0030116.1_g000001
rosa_roxburghii	Rroxscaffold_1G00021650 Rroxscaffold_6G00411580
rosa_rugosa	Rorug03G0103100 Rorug03G0103200 Rorug03G0103300 Rorug05G0317900
rosa_samantha	Rh3AG152700 Rh3BG176500 Rh3CG167500 Rh3DG199100 Rh5AG383600 Rh5BG395500 Rh5CG419200 Rh5DG410900
rosa_wichuraiana	Rw3G014400 Rw5G036140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	261
AasI	GACNNNNNNGTC	1 cut(s)	605
AccB1I	GGYRCC	1 cut(s)	1195
AccB7I	CCANNNNNTGG	1 cut(s)	525
AccI	GTMKAC	3 cut(s)	126, 1228, 1321
AclI	AACGTT	1 cut(s)	1268
AclWI	GGATC	2 cut(s)	11, 1940
AcoI	YGGCCR	3 cut(s)	192, 219, 685
AcsI	RAATTY	6 cut(s)	769, 1174, 1453, 1461, 1531, 1669
AcyI	GRCGYC	4 cut(s)	345, 668, 932, 1196
AdeI	CACNNNGTG	1 cut(s)	525
AfaI	GTAC	1 cut(s)	380
AfiI	CCNNNNNNNGG	6 cut(s)	190, 228, 406, 525, 709, 710
AflIII	ACRYGT	2 cut(s)	1777, 2027
AgeI	ACCGGT	2 cut(s)	64, 1796
AgsI	TTSAA	1 cut(s)	1675
AjnI	CCWGG	1 cut(s)	1355
AluBI	AGCT	6 cut(s)	25, 256, 553, 1165, 1629, 1856
AluI	AGCT	6 cut(s)	25, 256, 553, 1165, 1629, 1856
Alw21I	GWGCWC	5 cut(s)	111, 533, 911, 971, 1737
Alw26I	GTCTC	5 cut(s)	239, 383, 992, 1626, 2005
AlwI	GGATC	2 cut(s)	11, 1940
AlwNI	CAGNNNCTG	1 cut(s)	1724
Ama87I	CYCGRG	2 cut(s)	400, 1295
ApaI	GGGCCC	1 cut(s)	702
ApeKI	GCWGC	6 cut(s)	851, 874, 1305, 1612, 1629, 2003
ApoI	RAATTY	6 cut(s)	769, 1174, 1453, 1461, 1531, 1669
AsiGI	ACCGGT	2 cut(s)	64, 1796
AspLEI	GCGC	3 cut(s)	41, 386, 1198
AspS9I	GGNCC	8 cut(s)	52, 235, 272, 621, 698, 699, 1299, 2114
AsuC2I	CCSGG	5 cut(s)	134, 170, 491, 523, 673
AsuHPI	GGTGA	6 cut(s)	79, 451, 952, 964, 1114, 1197
AvaI	CYCGRG	2 cut(s)	400, 1295
AvaII	GGWCC	4 cut(s)	52, 235, 1299, 2114
AxyI	CCTNAGG	1 cut(s)	834
BaeGI	GKGCMC	2 cut(s)	497, 702
BalI	TGGCCA	1 cut(s)	221
BanI	GGYRCC	1 cut(s)	1195
BanII	GRGCYC	2 cut(s)	702, 1865
BbsI	GAAGAC	2 cut(s)	73, 303
Bbv12I	GWGCWC	5 cut(s)	111, 533, 911, 971, 1737
BbvCI	CCTCAGC	1 cut(s)	21
BbvI	GCAGC	6 cut(s)	838, 886, 1317, 1616, 1624, 2015
BccI	CCATC	4 cut(s)	160, 281, 1282, 1901
BceAI	ACGGC	6 cut(s)	370, 475, 610, 672, 700, 862
BcgI	CGANNNNNNTGC	4 cut(s)	1276, 1310, 1604, 1638
BciT130I	CCWGG	1 cut(s)	1357
BciVI	GTATCC	1 cut(s)	1786
BcnI	CCSGG	5 cut(s)	134, 170, 491, 523, 673
BcoDI	GTCTC	5 cut(s)	239, 383, 992, 1626, 2005
BfaI	CTAG	5 cut(s)	774, 855, 1014, 1458, 1748
BfmI	CTRYAG	3 cut(s)	1097, 1338, 1409
BfoI	RGCGCY	1 cut(s)	1199
BfuI	GTATCC	1 cut(s)	1786
BglI	GCCNNNNNGGC	1 cut(s)	505
BlpI	GCTNAGC	1 cut(s)	1925
Bme1390I	CCNGG	6 cut(s)	134, 170, 491, 523, 673, 1357
Bme18I	GGWCC	4 cut(s)	52, 235, 1299, 2114
BmeT110I	CYCGRG	2 cut(s)	400, 1295
BmgT120I	GGNCC	8 cut(s)	52, 235, 272, 621, 698, 699, 1299, 2114
BmiI	GGNNCC	9 cut(s)	237, 372, 680, 700, 701, 1036, 1197, 1300, 1354
BmrFI	CCNGG	6 cut(s)	134, 170, 491, 523, 673, 1357
BmrI	ACTGGG	1 cut(s)	1747
BmsI	GCATC	4 cut(s)	1482, 1630, 1911, 2108
BmuI	ACTGGG	1 cut(s)	1747
BpiI	GAAGAC	2 cut(s)	73, 303
BpmI	CTGGAG	2 cut(s)	659, 1618
Bpu10I	CCTNAGC	2 cut(s)	21, 970
Bpu1102I	GCTNAGC	1 cut(s)	1925
BpuMI	CCSGG	5 cut(s)	134, 170, 491, 523, 673
BsaAI	YACGTR	1 cut(s)	124
BsaBI	GATNNNNATC	1 cut(s)	1683
BsaHI	GRCGYC	4 cut(s)	345, 668, 932, 1196
BsaI	GGTCTC	2 cut(s)	239, 383
BsaWI	WCCGGW	3 cut(s)	64, 692, 1796
BsaXI	ACNNNNNCTCC	4 cut(s)	644, 674, 810, 840
Bsc4I	CCNNNNNNNGG	6 cut(s)	190, 228, 406, 525, 709, 710
Bse118I	RCCGGY	6 cut(s)	41, 64, 427, 504, 560, 1796
Bse1I	ACTGG	4 cut(s)	1431, 1576, 1635, 1742
Bse21I	CCTNAGG	1 cut(s)	834
Bse3DI	GCAATG	1 cut(s)	1801
Bse8I	GATNNNNATC	1 cut(s)	1683
BseBI	CCWGG	1 cut(s)	1357
BseGI	GGATG	3 cut(s)	981, 1117, 1834
BseJI	GATNNNNATC	1 cut(s)	1683
BseLI	CCNNNNNNNGG	6 cut(s)	190, 228, 406, 525, 709, 710
BseMI	GCAATG	1 cut(s)	1801
BseNI	ACTGG	4 cut(s)	1431, 1576, 1635, 1742
BseRI	GAGGAG	5 cut(s)	749, 752, 819, 822, 831
BseSI	GKGCMC	2 cut(s)	497, 702
BseX3I	CGGCCG	1 cut(s)	685
BseXI	GCAGC	6 cut(s)	838, 886, 1317, 1616, 1624, 2015
BsgI	GTGCAG	3 cut(s)	452, 980, 1743
Bsh1285I	CGRYCG	1 cut(s)	688
BshNI	GGYRCC	1 cut(s)	1195
BshTI	ACCGGT	2 cut(s)	64, 1796
BsiEI	CGRYCG	1 cut(s)	688
BsiHKAI	GWGCWC	5 cut(s)	111, 533, 911, 971, 1737
BsiHKCI	CYCGRG	2 cut(s)	400, 1295
BslFI	GGGAC	1 cut(s)	221
BslI	CCNNNNNNNGG	6 cut(s)	190, 228, 406, 525, 709, 710
BsmAI	GTCTC	5 cut(s)	239, 383, 992, 1626, 2005
BsmFI	GGGAC	1 cut(s)	221
Bso31I	GGTCTC	2 cut(s)	239, 383
BsoBI	CYCGRG	2 cut(s)	400, 1295
Bsp120I	GGGCCC	1 cut(s)	698
Bsp1286I	GDGCHC	8 cut(s)	111, 497, 533, 702, 911, 971, 1737, 1865
Bsp143I	GATC	4 cut(s)	16, 441, 1447, 1945
Bsp1720I	GCTNAGC	1 cut(s)	1925
Bsp19I	CCATGG	1 cut(s)	1151
BspLI	GGNNCC	9 cut(s)	237, 372, 680, 700, 701, 1036, 1197, 1300, 1354
BspMAI	CTGCAG	2 cut(s)	1342, 1413
BspPI	GGATC	2 cut(s)	11, 1940
BspT107I	GGYRCC	1 cut(s)	1195
BspTNI	GGTCTC	2 cut(s)	239, 383
BsrDI	GCAATG	1 cut(s)	1801
BsrFI	RCCGGY	6 cut(s)	41, 64, 427, 504, 560, 1796
BsrI	ACTGG	4 cut(s)	1431, 1576, 1635, 1742
BssAI	RCCGGY	6 cut(s)	41, 64, 427, 504, 560, 1796
BssMI	GATC	4 cut(s)	16, 441, 1447, 1945
BssNAI	GTATAC	1 cut(s)	1229
BssNI	GRCGYC	4 cut(s)	345, 668, 932, 1196
BssT1I	CCWWGG	3 cut(s)	447, 1085, 1151
Bst1107I	GTATAC	1 cut(s)	1229
Bst2UI	CCWGG	1 cut(s)	1357
Bst4CI	ACNGT	2 cut(s)	439, 1010
Bst6I	CTCTTC	1 cut(s)	817
BstACI	GRCGYC	4 cut(s)	345, 668, 932, 1196
BstBAI	YACGTR	1 cut(s)	124
BstDSI	CCRYGG	3 cut(s)	682, 1151, 1211
BstF5I	GGATG	3 cut(s)	981, 1117, 1834
BstH2I	RGCGCY	1 cut(s)	1199
BstHHI	GCGC	3 cut(s)	41, 386, 1198
BstKTI	GATC	4 cut(s)	19, 444, 1450, 1948
BstMAI	GTCTC	5 cut(s)	239, 383, 992, 1626, 2005
BstMBI	GATC	4 cut(s)	16, 441, 1447, 1945
BstMCI	CGRYCG	1 cut(s)	688
BstNI	CCWGG	1 cut(s)	1357
BstNSI	RCATGY	3 cut(s)	1364, 1781, 2031
BstSCI	CCNGG	6 cut(s)	132, 168, 489, 521, 671, 1355
BstSFI	CTRYAG	3 cut(s)	1097, 1338, 1409
BstSLI	GKGCMC	2 cut(s)	497, 702
BstV1I	GCAGC	6 cut(s)	838, 886, 1317, 1616, 1624, 2015
BstV2I	GAAGAC	2 cut(s)	73, 303
BstX2I	RGATCY	2 cut(s)	16, 1945
BstYI	RGATCY	2 cut(s)	16, 1945
BstZ17I	GTATAC	1 cut(s)	1229
BstZI	CGGCCG	1 cut(s)	685
Bsu36I	CCTNAGG	1 cut(s)	834
BsuI	GTATCC	1 cut(s)	1786
BtgI	CCRYGG	3 cut(s)	682, 1151, 1211
BtsCI	GGATG	3 cut(s)	981, 1117, 1834
BtsI	GCAGTG	1 cut(s)	968
BtsIMutI	CAGTG	4 cut(s)	968, 1642, 1735, 1760
CaiI	CAGNNNCTG	1 cut(s)	1724
CfoI	GCGC	3 cut(s)	41, 386, 1198
Cfr10I	RCCGGY	6 cut(s)	41, 64, 427, 504, 560, 1796
Cfr13I	GGNCC	8 cut(s)	52, 235, 272, 621, 698, 699, 1299, 2114
CseI	GACGC	4 cut(s)	353, 595, 657, 921
Csp6I	GTAC	1 cut(s)	379
CspAI	ACCGGT	2 cut(s)	64, 1796
CviQI	GTAC	1 cut(s)	379
DinI	GGCGCC	1 cut(s)	1197
DpnI	GATC	4 cut(s)	18, 443, 1449, 1947
DpnII	GATC	4 cut(s)	16, 441, 1447, 1945
DraI	TTTAAA	1 cut(s)	985
DraIII	CACNNNGTG	1 cut(s)	525
DrdI	GACNNNNNNGTC	1 cut(s)	605
DseDI	GACNNNNNNGTC	1 cut(s)	605
EaeI	YGGCCR	3 cut(s)	192, 219, 685
EagI	CGGCCG	1 cut(s)	685
Eam1104I	CTCTTC	1 cut(s)	817
EarI	CTCTTC	1 cut(s)	817
EciI	GGCGGA	1 cut(s)	406
EclXI	CGGCCG	1 cut(s)	685
Eco130I	CCWWGG	3 cut(s)	447, 1085, 1151
Eco147I	AGGCCT	1 cut(s)	832
Eco24I	GRGCYC	2 cut(s)	702, 1865
Eco31I	GGTCTC	2 cut(s)	239, 383
Eco47I	GGWCC	4 cut(s)	52, 235, 1299, 2114
Eco52I	CGGCCG	1 cut(s)	685
Eco81I	CCTNAGG	1 cut(s)	834
Eco88I	CYCGRG	2 cut(s)	400, 1295
EcoO109I	RGGNCCY	2 cut(s)	272, 699
EcoRI	GAATTC	2 cut(s)	769, 1461
EcoRII	CCWGG	1 cut(s)	1355
EcoT14I	CCWWGG	3 cut(s)	447, 1085, 1151
EcoT38I	GRGCYC	2 cut(s)	702, 1865
EgeI	GGCGCC	1 cut(s)	1197
EheI	GGCGCC	1 cut(s)	1197
ErhI	CCWWGG	3 cut(s)	447, 1085, 1151
FalI	AAGNNNNNCTT	2 cut(s)	1495, 1527
FaqI	GGGAC	1 cut(s)	221
FauI	CCCGC	2 cut(s)	353, 432
FauNDI	CATATG	1 cut(s)	1191
FblI	GTMKAC	3 cut(s)	126, 1228, 1321
FokI	GGATG	3 cut(s)	988, 1124, 1841
FriOI	GRGCYC	2 cut(s)	702, 1865
FspBI	CTAG	5 cut(s)	774, 855, 1014, 1458, 1748
GlaI	GCGC	3 cut(s)	40, 385, 1197
GsuI	CTGGAG	2 cut(s)	659, 1618
HaeII	RGCGCY	1 cut(s)	1199
HgaI	GACGC	4 cut(s)	353, 595, 657, 921
HhaI	GCGC	3 cut(s)	41, 386, 1198
Hin1I	GRCGYC	4 cut(s)	345, 668, 932, 1196
Hin6I	GCGC	3 cut(s)	39, 384, 1196
HinP1I	GCGC	3 cut(s)	39, 384, 1196
HincII	GTYRAC	3 cut(s)	541, 1266, 1595
HindII	GTYRAC	3 cut(s)	541, 1266, 1595
HpaI	GTTAAC	1 cut(s)	1266
HphI	GGTGA	6 cut(s)	79, 451, 952, 964, 1114, 1197
Hpy188III	TCNNGA	8 cut(s)	302, 400, 610, 1253, 1438, 1458, 1477, 1844
Hpy99I	CGWCG	4 cut(s)	212, 347, 560, 611
HpyAV	CCTTC	4 cut(s)	249, 263, 922, 1830
HpyCH4III	ACNGT	2 cut(s)	439, 1010
HpyCH4IV	ACGT	5 cut(s)	123, 453, 533, 583, 1268
HpyCH4V	TGCA	9 cut(s)	433, 961, 1234, 1340, 1411, 1643, 1760, 1806, 2099
HpySE526I	ACGT	5 cut(s)	123, 453, 533, 583, 1268
Hsp92I	GRCGYC	4 cut(s)	345, 668, 932, 1196
HspAI	GCGC	3 cut(s)	39, 384, 1196
KasI	GGCGCC	1 cut(s)	1195
KroI	GCCGGC	3 cut(s)	41, 504, 560
KroNI	GCCGGC	3 cut(s)	43, 506, 562
KspAI	GTTAAC	1 cut(s)	1266
Kzo9I	GATC	4 cut(s)	16, 441, 1447, 1945
LmnI	GCTCC	3 cut(s)	528, 1352, 1637
Lsp1109I	GCAGC	6 cut(s)	838, 886, 1317, 1616, 1624, 2015
LweI	GCATC	4 cut(s)	1482, 1630, 1911, 2108
MaeI	CTAG	5 cut(s)	774, 855, 1014, 1458, 1748
MaeII	ACGT	5 cut(s)	123, 453, 533, 583, 1268
MaeIII	GTNAC	2 cut(s)	1102, 1125
MalI	GATC	4 cut(s)	18, 443, 1449, 1947
MboI	GATC	4 cut(s)	16, 441, 1447, 1945
MboII	GAAGA	6 cut(s)	73, 303, 559, 834, 1228, 1579
MflI	RGATCY	2 cut(s)	16, 1945
MhlI	GDGCHC	8 cut(s)	111, 497, 533, 702, 911, 971, 1737, 1865
MlsI	TGGCCA	1 cut(s)	221
MluCI	AATT	8 cut(s)	769, 1078, 1174, 1453, 1461, 1531, 1669, 1772
MluNI	TGGCCA	1 cut(s)	221
Mly113I	GGCGCC	1 cut(s)	1196
MlyI	GAGTC	8 cut(s)	275, 322, 328, 560, 662, 1715, 1829, 1834
MmeI	TCCRAC	3 cut(s)	366, 1813, 1973
Mox20I	TGGCCA	1 cut(s)	221
MreI	CGCCGGCG	2 cut(s)	41, 560
MroNI	GCCGGC	3 cut(s)	41, 504, 560
MscI	TGGCCA	1 cut(s)	221
MseI	TTAA	8 cut(s)	984, 1056, 1265, 1382, 1398, 1962, 1995, 2120
Msp20I	TGGCCA	1 cut(s)	221
MspA1I	CMGCKG	1 cut(s)	1071
MspR9I	CCNGG	6 cut(s)	134, 170, 491, 523, 673, 1357
MvaI	CCWGG	1 cut(s)	1357
NaeI	GCCGGC	3 cut(s)	43, 506, 562
NarI	GGCGCC	1 cut(s)	1196
NciI	CCSGG	5 cut(s)	134, 170, 491, 523, 673
NcoI	CCATGG	1 cut(s)	1151
NdeI	CATATG	1 cut(s)	1191
NdeII	GATC	4 cut(s)	16, 441, 1447, 1945
NgoMIV	GCCGGC	3 cut(s)	41, 504, 560
NlaIV	GGNNCC	9 cut(s)	237, 372, 680, 700, 701, 1036, 1197, 1300, 1354
NmeAIII	GCCGAG	1 cut(s)	130
NmuCI	GTSAC	1 cut(s)	1102
NspI	RCATGY	3 cut(s)	1364, 1781, 2031
PaeI	GCATGC	1 cut(s)	1364
PceI	AGGCCT	1 cut(s)	832
PciI	ACATGT	2 cut(s)	1777, 2027
PcsI	WCGNNNNNNNCGW	3 cut(s)	450, 459, 561
PdiI	GCCGGC	3 cut(s)	43, 506, 562
PfeI	GAWTC	5 cut(s)	147, 180, 225, 613, 1684
PflFI	GACNNNGTC	2 cut(s)	212, 337
PflMI	CCANNNNNTGG	1 cut(s)	525
PinAI	ACCGGT	2 cut(s)	64, 1796
PleI	GAGTC	8 cut(s)	275, 322, 328, 560, 661, 1715, 1828, 1834
PluTI	GGCGCC	1 cut(s)	1199
PpsI	GAGTC	8 cut(s)	275, 322, 328, 560, 661, 1715, 1828, 1834
Ppu21I	YACGTR	1 cut(s)	124
PscI	ACATGT	2 cut(s)	1777, 2027
PsiI	TTATAA	1 cut(s)	261
Psp1406I	AACGTT	1 cut(s)	1268
Psp6I	CCWGG	1 cut(s)	1355
PspGI	CCWGG	1 cut(s)	1355
PspN4I	GGNNCC	9 cut(s)	237, 372, 680, 700, 701, 1036, 1197, 1300, 1354
PspOMI	GGGCCC	1 cut(s)	698
PspPI	GGNCC	8 cut(s)	52, 235, 272, 621, 698, 699, 1299, 2114
PsrI	GAACNNNNNNTAC	2 cut(s)	698, 730
PstI	CTGCAG	2 cut(s)	1342, 1413
PstNI	CAGNNNCTG	1 cut(s)	1724
PsuI	RGATCY	2 cut(s)	16, 1945
PsyI	GACNNNGTC	2 cut(s)	212, 337
RsaI	GTAC	1 cut(s)	380
RsaNI	GTAC	1 cut(s)	379
SaqAI	TTAA	8 cut(s)	984, 1056, 1265, 1382, 1398, 1962, 1995, 2120
Sau3AI	GATC	4 cut(s)	16, 441, 1447, 1945
Sau96I	GGNCC	8 cut(s)	52, 235, 272, 621, 698, 699, 1299, 2114
SbfI	CCTGCAGG	1 cut(s)	1342
SchI	GAGTC	8 cut(s)	275, 322, 328, 560, 662, 1715, 1829, 1834
ScrFI	CCNGG	6 cut(s)	134, 170, 491, 523, 673, 1357
SdaI	CCTGCAGG	1 cut(s)	1342
SduI	GDGCHC	8 cut(s)	111, 497, 533, 702, 911, 971, 1737, 1865
SfaNI	GCATC	4 cut(s)	1482, 1630, 1911, 2108
SfcI	CTRYAG	3 cut(s)	1097, 1338, 1409
SfoI	GGCGCC	1 cut(s)	1197
SgrAI	CRCCGGYG	4 cut(s)	41, 64, 427, 560
SinI	GGWCC	4 cut(s)	52, 235, 1299, 2114
SphI	GCATGC	1 cut(s)	1364
Sse8387I	CCTGCAGG	1 cut(s)	1342
Sse9I	AATT	8 cut(s)	769, 1078, 1174, 1453, 1461, 1531, 1669, 1772
SseBI	AGGCCT	1 cut(s)	832
SspDI	GGCGCC	1 cut(s)	1195
SspMI	CTAG	5 cut(s)	774, 855, 1014, 1458, 1748
StuI	AGGCCT	1 cut(s)	832
StyD4I	CCNGG	6 cut(s)	132, 168, 489, 521, 671, 1355
StyI	CCWWGG	3 cut(s)	447, 1085, 1151
TaaI	ACNGT	2 cut(s)	439, 1010
TaiI	ACGT	5 cut(s)	126, 456, 536, 586, 1271
TaqI	TCGA	1 cut(s)	1446
TasI	AATT	8 cut(s)	769, 1078, 1174, 1453, 1461, 1531, 1669, 1772
TauI	GCSGC	4 cut(s)	48, 360, 668, 950
TfiI	GAWTC	5 cut(s)	147, 180, 225, 613, 1684
Tru1I	TTAA	8 cut(s)	984, 1056, 1265, 1382, 1398, 1962, 1995, 2120
Tru9I	TTAA	8 cut(s)	984, 1056, 1265, 1382, 1398, 1962, 1995, 2120
TscAI	CASTG	4 cut(s)	968, 1642, 1742, 1767
TseFI	GTSAC	1 cut(s)	1102
TseI	GCWGC	6 cut(s)	851, 874, 1305, 1612, 1629, 2003
Tsp45I	GTSAC	1 cut(s)	1102
TspDTI	ATGAA	5 cut(s)	303, 1018, 1804, 1992, 2055
TspGWI	ACGGA	2 cut(s)	130, 1228
TspRI	CASTG	4 cut(s)	968, 1642, 1742, 1767
Tth111I	GACNNNGTC	2 cut(s)	212, 337
Van91I	CCANNNNNTGG	1 cut(s)	525
VpaK11BI	GGWCC	4 cut(s)	52, 235, 1299, 2114
XapI	RAATTY	6 cut(s)	769, 1174, 1453, 1461, 1531, 1669
XbaI	TCTAGA	1 cut(s)	1457
XceI	RCATGY	3 cut(s)	1364, 1781, 2031
XcmI	CCANNNNNNNNNTGG	2 cut(s)	229, 1189
XmiI	GTMKAC	3 cut(s)	126, 1228, 1321
XspI	CTAG	5 cut(s)	774, 855, 1014, 1458, 1748

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.