Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0002309

Physical Location & Seq

Genomic Coordinates Forward (+)

66186611 .. 66191374

Gene Structure 4764 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG383600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2139 bp

ATGAAGGACATGGAGAAAAGCTTGGATCCTCAGCTATGGCACGCCTGCGCCGGCGGCATGGTCCAAATGCCTCCGGTGAACTCCAAAGTCTTCTACTTTCCTCAAGGCCACGCCGAGCACGCCCAAACCCACGTCGATTTCCCCGCCTCCTCCGTCAGAATCCCACCTCTCATTCTCTGCCGCGTCGCCGGAATCAGATACATGGCCGACCCGGAAACCGACGAGGTCTTCGCCAGAATCCGGCTGGTCCCTTCCGAGAGCAACGAGGACCAAGGCTCTGTGGACTCTGATGGGTCTGGGAATCCGGAAAAGCCTTCTTCGCCTTCTTCTTTCGCTAAGACTCTGACCCAGTCCGACGCCAACAATGGCGGCGGGTTCTCCGTCCCGAGGTACTGCGCCGAGACCATTTTCCCGAGGCTGGACTACTCCGCCGACCCGCCCGTGCAGACGGTGATCGCCAAGGACGTCCACGGCGAGGTGTGGAAGTTCCGGCACATTTACCGAGGCACCCCTCGCCGGCATTTGCTGACCACCGGGTGGAGCACGTTCGTGAACCAGAAGAAGCTCGTCGCCGGCGACTCGATTGTGTTCCTGCGAGCCGAAAACGGCGACCTCTGCGTCGGGATTCGGAGGGCCAAGCGGGGGTCGCCGGAGGGGTCGTCGGAATCGGGGTGGAACTACGGCGGTTCTGGGGGAGGGTCGGTTTTGCCGTATTCCGGGTTCTCAGTGTTTCTGAAAGATGAAGAGAGCAAAATGGGGAGAAATAATGGGTTTGGGAATTCGAGTCTGAGTCTGAATAATGGGAAGGTGAGAGGGGGCAGAGGAGGAGGAAGAGTGAGGCCTGAGGCTGTGGTGGAGGCTGCCACTCTTGCGGCCAATGGACAGCCGTTTGAGGTGGTTTATTATCCGAGAGCCAGCACGCCGGAGTTTTGTGTTAAGGCCTCGGCGGTGAGGGCGGCGGTGAGGGTGCAGTGGTGCTCAGGCATGAGGTTTAAGATGGCCTTTGAGACTGAGGACTCTTCTAGGATTAGTTGGTTCATGGGAACCATAGCTTCTGTTGATGTTAATGATAAAATCCGCTGGCCTAATTCTCCTTGGAGAGTTCTACAGGTGACATGGGATGAGCCAGATTTGTTACAGAATGTGAAGTGTGTTAGCCCATGGTTGATTGAGCTGGTATCAAATTTTCCCATTATCCACATGGCGCCCTTTTCACCGCCACAGAAGAAGTTGCGTATCCCGCAACACCCAGACTTTGACGGGCAGTTAACGTTGCCATCATTTTCAGGCAACCCCCTCGGGTCCAGCAGCCCCATGTGTTGTCTACCAGATAACACTCCTGCAGGCATACAGGGAGCCAGGCATGCTCAACTTAGAATATCTTTATCAAATCTCCACTTTAACAGCAAACTGCAGTCGGGGCTGTTCTCGTCCAGTTTCCAGAGGTTCGATCAAAATTCTAGAATTCCAAATGGCATCAGGAACGGCCACTCAAACAGCAACGAAAGCCTATCTTGTTTGCTAACAATGGGAAGTTCTAATCAGAACTTGGAGAAATCTGATGATGTGAAGAAACACCAGTTTTTACTCTTTGGTCAACCAATAATTACTGAGCAGCAGATCTCTCGTAGCTGCTCCAGTGATGCAGTTTCACAAGTTCTTGCTGGTAATAATTTGAAAGATGAGAATCAAGGCAGAAAAAGGTTTCTATCTGTTGGTTCAGACTCTGCTCTTGAGCGCTGGGTTTCACTAGAGAAATCTGCATTGAACAAGGAATTTCAAGCTATTGATGTGGATACCGGTCATTGCAAGGTATTCATGGAGTCCGAGGATGTTGGAAGGACTCTTGACGTCTCAGCTCTAGGCTCTTATGATGAGTTATACAGGAGGCTGACCATCATGTTTGGATTAGAAAAACCGGAGATGCTGAGCCATGTTCTTTACCGAGATCCAACAGGTGTCGTTAAACAAACTGGAGATGAACCATTCGGTGAATTTAAGAAAACAGCAAAGAGACTGACTATTCTAACACGTCCGGCCAATGAAACTATTGGAAGGACCTGGATTAGAGGAATGGAAAATGCTGAAAGTAGACTTGGTGCATCAAACAAGACTGGTCCTTTGAGCATATTTGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Auxin_resp B3

Protein Analysis

712

Amino Acids

78.39

Weight (kDa)

8.47

Isoelectric Point (pI)

44.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B3	PF02362	111 - 212	1.7e-23	B3 DNA binding domain
BRWD_AD	PF25313	291 - 393	9.2e-09	BRWD/PHIP ancillary domain-like domain
ARF_AD	PF06507	310 - 393	2.6e-33	Auxin response factor ancillary domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002309)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G28350 AT2G28350
fragaria_vesca	FvH4_3g32000 FvH4_3g32000 FvH4_6g15960 FvH4_6g15960 FvH4_6g15960
malus_domestica	MD03G1119500.v1.1 MD03G1119700.v1.1 MD04G1096900.v1.1
prunus_persica	Prupe.6G102800_v2.0.a1 Prupe.6G102800_v2.0.a1 Prupe.6G102800_v2.0.a1 Prupe.6G236200_v2.0.a1 Prupe.6G236200_v2.0.a1 Prupe.6G236200_v2.0.a1
pyrus_communis	pycom04g09200 pycom11g11370 pycom12g11700
rosa_chinensis	RchiOBHm_Chr3g0469661 RchiOBHm_Chr5g0058761
rosa_laevigata	RLG00000024330 RLG00000035245
rosa_multiflora	Rmu_sc0000367.1_g000238 Rmu_sc0006483.1_g000023 Rmu_sc0030116.1_g000001
rosa_roxburghii	Rroxscaffold_1G00021650 Rroxscaffold_6G00411580
rosa_rugosa	Rorug03G0103100 Rorug03G0103200 Rorug03G0103300 Rorug05G0317900
rosa_samantha	Rh3AG152700 Rh3BG176500 Rh3CG167500 Rh3DG199100 Rh5AG383600 Rh5BG395500 Rh5CG419200 Rh5DG410900
rosa_wichuraiana	Rw3G014400 Rw5G036140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	617
AatII	GACGTC	2 cut(s)	468, 1854
AccB1I	GGYRCC	2 cut(s)	506, 1204
AccB7I	CCANNNNNTGG	1 cut(s)	537
AccI	GTMKAC	2 cut(s)	1324, 2092
AccII	CGCG	1 cut(s)	183
AccIII	TCCGGA	1 cut(s)	304
AclI	AACGTT	1 cut(s)	1271
AclWI	GGATC	3 cut(s)	20, 33, 1943
AcoI	YGGCCR	4 cut(s)	204, 873, 1486, 2037
AcsI	RAATTY	6 cut(s)	778, 1183, 1456, 1464, 1775, 1994
AcyI	GRCGYC	4 cut(s)	357, 465, 1205, 1851
AdeI	CACNNNGTG	1 cut(s)	537
AfaI	GTAC	1 cut(s)	392
AfeI	AGCGCT	1 cut(s)	1739
AfiI	CCNNNNNNNGG	8 cut(s)	240, 387, 418, 475, 516, 537, 642, 716
AflIII	ACRYGT	1 cut(s)	2030
AgeI	ACCGGT	1 cut(s)	1799
AgsI	TTSAA	3 cut(s)	1678, 1768, 1781
AjiI	CACGTC	2 cut(s)	133, 2033
AjnI	CCWGG	2 cut(s)	1358, 2060
AjuI	GAANNNNNNNTTGG	2 cut(s)	2079, 2111
AleI	CACNNNNGTG	1 cut(s)	548
AluBI	AGCT	8 cut(s)	21, 34, 565, 1052, 1174, 1632, 1784, 1859
AluI	AGCT	8 cut(s)	21, 34, 565, 1052, 1174, 1632, 1784, 1859
Alw21I	GWGCWC	3 cut(s)	120, 545, 980
Alw26I	GTCTC	4 cut(s)	395, 1001, 1858, 2008
AlwI	GGATC	3 cut(s)	20, 33, 1943
AlwNI	CAGNNNCTG	1 cut(s)	1727
Ama87I	CYCGRG	3 cut(s)	385, 412, 1298
Aor13HI	TCCGGA	1 cut(s)	304
Aor51HI	AGCGCT	1 cut(s)	1739
ApeKI	GCWGC	4 cut(s)	860, 1308, 1615, 1632
ApoI	RAATTY	6 cut(s)	778, 1183, 1456, 1464, 1775, 1994
ArsI	GACNNNNNNTTYG	4 cut(s)	212, 244, 2104, 2136
AsiGI	ACCGGT	1 cut(s)	1799
AspLEI	GCGC	4 cut(s)	50, 398, 1207, 1740
AspS9I	GGNCC	7 cut(s)	61, 247, 268, 633, 1302, 2058, 2117
AsuC2I	CCSGG	3 cut(s)	212, 535, 718
AsuHPI	GGTGA	8 cut(s)	88, 463, 820, 961, 973, 1123, 1206, 2003
AvaI	CYCGRG	3 cut(s)	385, 412, 1298
AvaII	GGWCC	6 cut(s)	61, 247, 268, 1302, 2058, 2117
AxyI	CCTNAGG	1 cut(s)	843
BamHI	GGATCC	1 cut(s)	25
BanI	GGYRCC	2 cut(s)	506, 1204
BbsI	GAAGAC	2 cut(s)	82, 220
Bbv12I	GWGCWC	3 cut(s)	120, 545, 980
BbvCI	CCTCAGC	1 cut(s)	30
BbvI	GCAGC	4 cut(s)	847, 1320, 1619, 1627
BccI	CCATC	4 cut(s)	284, 991, 1285, 1904
BceAI	ACGGC	6 cut(s)	487, 622, 694, 697, 871, 1501
BcgI	CGANNNNNNTGC	4 cut(s)	1279, 1313, 1607, 1641
BciT130I	CCWGG	2 cut(s)	1360, 2062
BciVI	GTATCC	2 cut(s)	1247, 1789
BcnI	CCSGG	3 cut(s)	212, 535, 718
BcoDI	GTCTC	4 cut(s)	395, 1001, 1858, 2008
BfaI	CTAG	4 cut(s)	1023, 1461, 1751, 1862
BfmI	CTRYAG	3 cut(s)	1106, 1341, 1412
BfoI	RGCGCY	2 cut(s)	1208, 1741
BfuI	GTATCC	2 cut(s)	1247, 1789
BglII	AGATCT	1 cut(s)	1620
BisI	GCNGC	9 cut(s)	55, 181, 370, 861, 873, 957, 1309, 1616, 1633
BlpI	GCTNAGC	1 cut(s)	1928
BlsI	GCNGC	9 cut(s)	56, 182, 371, 862, 874, 958, 1310, 1617, 1634
Bme1390I	CCNGG	5 cut(s)	212, 535, 718, 1360, 2062
Bme18I	GGWCC	6 cut(s)	61, 247, 268, 1302, 2058, 2117
BmeT110I	CYCGRG	3 cut(s)	385, 412, 1298
BmgBI	CACGTC	2 cut(s)	133, 2033
BmgT120I	GGNCC	7 cut(s)	61, 247, 268, 633, 1302, 2058, 2117
BmiI	GGNNCC	7 cut(s)	27, 249, 508, 1045, 1206, 1303, 1357
BmrFI	CCNGG	5 cut(s)	212, 535, 718, 1360, 2062
BmrI	ACTGGG	1 cut(s)	343
BmsI	GCATC	4 cut(s)	1485, 1633, 1914, 2111
BmuI	ACTGGG	1 cut(s)	343
BpiI	GAAGAC	2 cut(s)	82, 220
BpmI	CTGGAG	2 cut(s)	1621, 1995
Bpu10I	CCTNAGC	2 cut(s)	30, 979
Bpu1102I	GCTNAGC	1 cut(s)	1928
BpuEI	CTTGAG	2 cut(s)	87, 1754
BpuMI	CCSGG	3 cut(s)	212, 535, 718
BsaBI	GATNNNNATC	1 cut(s)	1686
BsaHI	GRCGYC	4 cut(s)	357, 465, 1205, 1851
BsaI	GGTCTC	1 cut(s)	395
BsaWI	WCCGGW	4 cut(s)	73, 304, 1799, 1918
BsaXI	ACNNNNNCTCC	6 cut(s)	644, 674, 687, 717, 819, 849
Bsc4I	CCNNNNNNNGG	8 cut(s)	240, 387, 418, 475, 516, 537, 642, 716
Bse118I	RCCGGY	4 cut(s)	50, 516, 572, 1799
Bse1I	ACTGG	6 cut(s)	349, 1434, 1579, 1638, 1978, 2119
Bse21I	CCTNAGG	1 cut(s)	843
Bse3DI	GCAATG	1 cut(s)	1804
Bse8I	GATNNNNATC	1 cut(s)	1686
BseAI	TCCGGA	1 cut(s)	304
BseBI	CCWGG	2 cut(s)	1360, 2062
BseGI	GGATG	2 cut(s)	1126, 1837
BseJI	GATNNNNATC	1 cut(s)	1686
BseLI	CCNNNNNNNGG	8 cut(s)	240, 387, 418, 475, 516, 537, 642, 716
BseMI	GCAATG	1 cut(s)	1804
BseMII	CTCAG	9 cut(s)	44, 738, 779, 834, 993, 1002, 1602, 1869, 1919
BseNI	ACTGG	6 cut(s)	349, 1434, 1579, 1638, 1978, 2119
BseRI	GAGGAG	3 cut(s)	139, 837, 840
BseXI	GCAGC	4 cut(s)	847, 1320, 1619, 1627
BseYI	CCCAGC	1 cut(s)	1740
BsgI	GTGCAG	2 cut(s)	464, 989
Bsh1236I	CGCG	1 cut(s)	183
BshNI	GGYRCC	2 cut(s)	506, 1204
BshTI	ACCGGT	1 cut(s)	1799
BsiHKAI	GWGCWC	3 cut(s)	120, 545, 980
BsiHKCI	CYCGRG	3 cut(s)	385, 412, 1298
BslFI	GGGAC	2 cut(s)	233, 368
BslI	CCNNNNNNNGG	8 cut(s)	240, 387, 418, 475, 516, 537, 642, 716
BsmAI	GTCTC	4 cut(s)	395, 1001, 1858, 2008
BsmBI	CGTCTC	1 cut(s)	1858
BsmFI	GGGAC	2 cut(s)	233, 368
Bso31I	GGTCTC	1 cut(s)	395
BsoBI	CYCGRG	3 cut(s)	385, 412, 1298
Bsp1286I	GDGCHC	3 cut(s)	120, 545, 980
Bsp13I	TCCGGA	1 cut(s)	304
Bsp143I	GATC	5 cut(s)	25, 453, 1450, 1620, 1948
Bsp1720I	GCTNAGC	1 cut(s)	1928
Bsp19I	CCATGG	1 cut(s)	1160
BspCNI	CTCAG	9 cut(s)	43, 737, 780, 835, 992, 1003, 1603, 1868, 1920
BspEI	TCCGGA	1 cut(s)	304
BspFNI	CGCG	1 cut(s)	183
BspLI	GGNNCC	7 cut(s)	27, 249, 508, 1045, 1206, 1303, 1357
BspMAI	CTGCAG	2 cut(s)	1345, 1416
BspPI	GGATC	3 cut(s)	20, 33, 1943
BspT107I	GGYRCC	2 cut(s)	506, 1204
BspTNI	GGTCTC	1 cut(s)	395
BsrDI	GCAATG	1 cut(s)	1804
BsrFI	RCCGGY	4 cut(s)	50, 516, 572, 1799
BsrI	ACTGG	6 cut(s)	349, 1434, 1579, 1638, 1978, 2119
BssAI	RCCGGY	4 cut(s)	50, 516, 572, 1799
BssMI	GATC	5 cut(s)	25, 453, 1450, 1620, 1948
BssNI	GRCGYC	4 cut(s)	357, 465, 1205, 1851
BssT1I	CCWWGG	4 cut(s)	271, 459, 1094, 1160
Bst2UI	CCWGG	2 cut(s)	1360, 2062
Bst4CI	ACNGT	1 cut(s)	451
Bst6I	CTCTTC	3 cut(s)	738, 826, 1024
BstACI	GRCGYC	4 cut(s)	357, 465, 1205, 1851
BstDSI	CCRYGG	2 cut(s)	469, 1160
BstF5I	GGATG	2 cut(s)	1126, 1837
BstFNI	CGCG	1 cut(s)	183
BstH2I	RGCGCY	2 cut(s)	1208, 1741
BstHHI	GCGC	4 cut(s)	50, 398, 1207, 1740
BstKTI	GATC	5 cut(s)	28, 456, 1453, 1623, 1951
BstMAI	GTCTC	4 cut(s)	395, 1001, 1858, 2008
BstMBI	GATC	5 cut(s)	25, 453, 1450, 1620, 1948
BstNI	CCWGG	2 cut(s)	1360, 2062
BstNSI	RCATGY	1 cut(s)	1367
BstSCI	CCNGG	5 cut(s)	210, 533, 716, 1358, 2060
BstSFI	CTRYAG	3 cut(s)	1106, 1341, 1412
BstUI	CGCG	1 cut(s)	183
BstV1I	GCAGC	4 cut(s)	847, 1320, 1619, 1627
BstV2I	GAAGAC	2 cut(s)	82, 220
BstX2I	RGATCY	3 cut(s)	25, 1620, 1948
BstYI	RGATCY	3 cut(s)	25, 1620, 1948
Bsu36I	CCTNAGG	1 cut(s)	843
BsuI	GTATCC	2 cut(s)	1247, 1789
BtgI	CCRYGG	2 cut(s)	469, 1160
BtrI	CACGTC	2 cut(s)	133, 2033
BtsCI	GGATG	2 cut(s)	1126, 1837
BtsI	GCAGTG	1 cut(s)	977
BtsIMutI	CAGTG	3 cut(s)	732, 977, 1645
CaiI	CAGNNNCTG	1 cut(s)	1727
CfoI	GCGC	4 cut(s)	50, 398, 1207, 1740
Cfr10I	RCCGGY	4 cut(s)	50, 516, 572, 1799
Cfr13I	GGNCC	7 cut(s)	61, 247, 268, 633, 1302, 2058, 2117
CseI	GACGC	3 cut(s)	172, 365, 607
Csp6I	GTAC	1 cut(s)	391
CspAI	ACCGGT	1 cut(s)	1799
CviQI	GTAC	1 cut(s)	391
DinI	GGCGCC	1 cut(s)	1206
DpnI	GATC	5 cut(s)	27, 455, 1452, 1622, 1950
DpnII	GATC	5 cut(s)	25, 453, 1450, 1620, 1948
DraIII	CACNNNGTG	1 cut(s)	537
DrdI	GACNNNNNNGTC	1 cut(s)	617
DseDI	GACNNNNNNGTC	1 cut(s)	617
EaeI	YGGCCR	4 cut(s)	204, 873, 1486, 2037
Eam1104I	CTCTTC	3 cut(s)	738, 826, 1024
EarI	CTCTTC	3 cut(s)	738, 826, 1024
EciI	GGCGGA	1 cut(s)	418
Eco130I	CCWWGG	4 cut(s)	271, 459, 1094, 1160
Eco147I	AGGCCT	2 cut(s)	841, 941
Eco31I	GGTCTC	1 cut(s)	395
Eco47I	GGWCC	6 cut(s)	61, 247, 268, 1302, 2058, 2117
Eco47III	AGCGCT	1 cut(s)	1739
Eco81I	CCTNAGG	1 cut(s)	843
Eco88I	CYCGRG	3 cut(s)	385, 412, 1298
EcoO109I	RGGNCCY	1 cut(s)	2058
EcoRI	GAATTC	2 cut(s)	778, 1464
EcoRII	CCWGG	2 cut(s)	1358, 2060
EcoT14I	CCWWGG	4 cut(s)	271, 459, 1094, 1160
EgeI	GGCGCC	1 cut(s)	1206
EheI	GGCGCC	1 cut(s)	1206
ErhI	CCWWGG	4 cut(s)	271, 459, 1094, 1160
Esp3I	CGTCTC	1 cut(s)	1858
FalI	AAGNNNNNCTT	4 cut(s)	986, 1018, 1498, 1530
FaqI	GGGAC	2 cut(s)	233, 368
FauI	CCCGC	5 cut(s)	151, 365, 444, 633, 1248
FblI	GTMKAC	2 cut(s)	1324, 2092
Fnu4HI	GCNGC	9 cut(s)	55, 181, 370, 861, 873, 957, 1309, 1616, 1633
FokI	GGATG	2 cut(s)	1133, 1844
Fsp4HI	GCNGC	9 cut(s)	55, 181, 370, 861, 873, 957, 1309, 1616, 1633
FspBI	CTAG	4 cut(s)	1023, 1461, 1751, 1862
GlaI	GCGC	4 cut(s)	49, 397, 1206, 1739
GluI	GCNGC	9 cut(s)	55, 181, 370, 861, 873, 957, 1309, 1616, 1633
GsaI	CCCAGC	1 cut(s)	1744
GsuI	CTGGAG	2 cut(s)	1621, 1995
HaeII	RGCGCY	2 cut(s)	1208, 1741
HgaI	GACGC	3 cut(s)	172, 365, 607
HhaI	GCGC	4 cut(s)	50, 398, 1207, 1740
Hin1I	GRCGYC	4 cut(s)	357, 465, 1205, 1851
Hin6I	GCGC	4 cut(s)	48, 396, 1205, 1738
HinP1I	GCGC	4 cut(s)	48, 396, 1205, 1738
HincII	GTYRAC	2 cut(s)	1269, 1598
HindII	GTYRAC	2 cut(s)	1269, 1598
HindIII	AAGCTT	1 cut(s)	19
HpaI	GTTAAC	1 cut(s)	1269
HphI	GGTGA	8 cut(s)	88, 463, 820, 961, 973, 1123, 1206, 2003
Hpy166II	GTNNAC	8 cut(s)	79, 283, 469, 553, 1269, 1325, 1598, 2093
Hpy8I	GTNNAC	8 cut(s)	79, 283, 469, 553, 1269, 1325, 1598, 2093
Hpy99I	CGWCG	7 cut(s)	137, 188, 224, 359, 572, 623, 664
HpyAV	CCTTC	6 cut(s)	261, 324, 333, 799, 1833, 2049
HpyCH4III	ACNGT	1 cut(s)	451
HpyCH4IV	ACGT	6 cut(s)	132, 465, 545, 1271, 1851, 2032
HpyCH4V	TGCA	8 cut(s)	445, 970, 1343, 1414, 1646, 1763, 1809, 2102
HpySE526I	ACGT	6 cut(s)	132, 465, 545, 1271, 1851, 2032
Hsp92I	GRCGYC	4 cut(s)	357, 465, 1205, 1851
HspAI	GCGC	4 cut(s)	48, 396, 1205, 1738
KasI	GGCGCC	1 cut(s)	1204
Kpn2I	TCCGGA	1 cut(s)	304
KroI	GCCGGC	3 cut(s)	50, 516, 572
KroNI	GCCGGC	3 cut(s)	52, 518, 574
KspAI	GTTAAC	1 cut(s)	1269
Kzo9I	GATC	5 cut(s)	25, 453, 1450, 1620, 1948
LmnI	GCTCC	3 cut(s)	540, 1355, 1640
Lsp1109I	GCAGC	4 cut(s)	847, 1320, 1619, 1627
LweI	GCATC	4 cut(s)	1485, 1633, 1914, 2111
MaeI	CTAG	4 cut(s)	1023, 1461, 1751, 1862
MaeII	ACGT	6 cut(s)	132, 465, 545, 1271, 1851, 2032
MaeIII	GTNAC	2 cut(s)	1111, 1134
MalI	GATC	5 cut(s)	27, 455, 1452, 1622, 1950
MboI	GATC	5 cut(s)	25, 453, 1450, 1620, 1948
MflI	RGATCY	3 cut(s)	25, 1620, 1948
MhlI	GDGCHC	3 cut(s)	120, 545, 980
MluCI	AATT	9 cut(s)	778, 1087, 1183, 1456, 1464, 1605, 1672, 1775, 1994
Mly113I	GGCGCC	1 cut(s)	1205
MlyI	GAGTC	9 cut(s)	278, 334, 572, 793, 799, 1010, 1718, 1832, 1837
MmeI	TCCRAC	4 cut(s)	378, 642, 1816, 1976
MreI	CGCCGGCG	2 cut(s)	50, 572
MroI	TCCGGA	1 cut(s)	304
MroNI	GCCGGC	3 cut(s)	50, 516, 572
MseI	TTAA	7 cut(s)	936, 993, 1065, 1268, 1401, 1965, 1998
MslI	CAYNNNNRTG	1 cut(s)	548
MspA1I	CMGCKG	1 cut(s)	1080
MspR9I	CCNGG	5 cut(s)	212, 535, 718, 1360, 2062
MvaI	CCWGG	2 cut(s)	1360, 2062
MvnI	CGCG	1 cut(s)	183
NaeI	GCCGGC	3 cut(s)	52, 518, 574
NarI	GGCGCC	1 cut(s)	1205
NciI	CCSGG	3 cut(s)	212, 535, 718
NcoI	CCATGG	1 cut(s)	1160
NdeII	GATC	5 cut(s)	25, 453, 1450, 1620, 1948
NgoMIV	GCCGGC	3 cut(s)	50, 516, 572
NlaIV	GGNNCC	7 cut(s)	27, 249, 508, 1045, 1206, 1303, 1357
NmeAIII	GCCGAG	3 cut(s)	139, 424, 923
NmuCI	GTSAC	1 cut(s)	1111
NspI	RCATGY	1 cut(s)	1367
OliI	CACNNNNGTG	1 cut(s)	548
PaeI	GCATGC	1 cut(s)	1367
PceI	AGGCCT	2 cut(s)	841, 941
PcsI	WCGNNNNNNNCGW	4 cut(s)	462, 471, 573, 707
PdiI	GCCGGC	3 cut(s)	52, 518, 574
PfeI	GAWTC	7 cut(s)	159, 192, 237, 301, 625, 665, 1687
PflFI	GACNNNGTC	2 cut(s)	224, 349
PflMI	CCANNNNNTGG	1 cut(s)	537
PinAI	ACCGGT	1 cut(s)	1799
PkrI	GCNGC	9 cut(s)	56, 182, 371, 862, 874, 958, 1310, 1617, 1634
PleI	GAGTC	9 cut(s)	278, 334, 572, 792, 798, 1010, 1718, 1831, 1837
PluTI	GGCGCC	1 cut(s)	1208
PpsI	GAGTC	9 cut(s)	278, 334, 572, 792, 798, 1010, 1718, 1831, 1837
PpuMI	RGGWCCY	1 cut(s)	2058
Psp1406I	AACGTT	1 cut(s)	1271
Psp5II	RGGWCCY	1 cut(s)	2058
Psp6I	CCWGG	2 cut(s)	1358, 2060
PspFI	CCCAGC	1 cut(s)	1740
PspGI	CCWGG	2 cut(s)	1358, 2060
PspN4I	GGNNCC	7 cut(s)	27, 249, 508, 1045, 1206, 1303, 1357
PspPI	GGNCC	7 cut(s)	61, 247, 268, 633, 1302, 2058, 2117
PspPPI	RGGWCCY	1 cut(s)	2058
PsrI	GAACNNNNNNTAC	2 cut(s)	704, 736
PstI	CTGCAG	2 cut(s)	1345, 1416
PstNI	CAGNNNCTG	1 cut(s)	1727
PsuI	RGATCY	3 cut(s)	25, 1620, 1948
PsyI	GACNNNGTC	2 cut(s)	224, 349
RsaI	GTAC	1 cut(s)	392
RsaNI	GTAC	1 cut(s)	391
RseI	CAYNNNNRTG	1 cut(s)	548
SaqAI	TTAA	7 cut(s)	936, 993, 1065, 1268, 1401, 1965, 1998
SatI	GCNGC	9 cut(s)	55, 181, 370, 861, 873, 957, 1309, 1616, 1633
Sau3AI	GATC	5 cut(s)	25, 453, 1450, 1620, 1948
Sau96I	GGNCC	7 cut(s)	61, 247, 268, 633, 1302, 2058, 2117
SbfI	CCTGCAGG	1 cut(s)	1345
SchI	GAGTC	9 cut(s)	278, 334, 572, 793, 799, 1010, 1718, 1832, 1837
ScrFI	CCNGG	5 cut(s)	212, 535, 718, 1360, 2062
SdaI	CCTGCAGG	1 cut(s)	1345
SduI	GDGCHC	3 cut(s)	120, 545, 980
SfaNI	GCATC	4 cut(s)	1485, 1633, 1914, 2111
SfcI	CTRYAG	3 cut(s)	1106, 1341, 1412
SfoI	GGCGCC	1 cut(s)	1206
SgrAI	CRCCGGYG	2 cut(s)	50, 572
SinI	GGWCC	6 cut(s)	61, 247, 268, 1302, 2058, 2117
SmiMI	CAYNNNNRTG	1 cut(s)	548
SmlI	CTYRAG	2 cut(s)	102, 1733
SmoI	CTYRAG	2 cut(s)	102, 1733
SphI	GCATGC	1 cut(s)	1367
Sse8387I	CCTGCAGG	1 cut(s)	1345
Sse9I	AATT	9 cut(s)	778, 1087, 1183, 1456, 1464, 1605, 1672, 1775, 1994
SseBI	AGGCCT	2 cut(s)	841, 941
SspDI	GGCGCC	1 cut(s)	1204
SspMI	CTAG	4 cut(s)	1023, 1461, 1751, 1862
StuI	AGGCCT	2 cut(s)	841, 941
StyD4I	CCNGG	5 cut(s)	210, 533, 716, 1358, 2060
StyI	CCWWGG	4 cut(s)	271, 459, 1094, 1160
TaaI	ACNGT	1 cut(s)	451
TaiI	ACGT	6 cut(s)	135, 468, 548, 1274, 1854, 2035
TaqI	TCGA	4 cut(s)	135, 581, 782, 1449
TasI	AATT	9 cut(s)	778, 1087, 1183, 1456, 1464, 1605, 1672, 1775, 1994
TauI	GCSGC	5 cut(s)	57, 183, 372, 875, 959
TfiI	GAWTC	7 cut(s)	159, 192, 237, 301, 625, 665, 1687
Tru1I	TTAA	7 cut(s)	936, 993, 1065, 1268, 1401, 1965, 1998
Tru9I	TTAA	7 cut(s)	936, 993, 1065, 1268, 1401, 1965, 1998
TscAI	CASTG	3 cut(s)	732, 977, 1645
TseFI	GTSAC	1 cut(s)	1111
TseI	GCWGC	4 cut(s)	860, 1308, 1615, 1632
Tsp45I	GTSAC	1 cut(s)	1111
TspDTI	ATGAA	6 cut(s)	17, 756, 1027, 1807, 1995, 2058
TspGWI	ACGGA	2 cut(s)	142, 370
TspRI	CASTG	3 cut(s)	732, 977, 1645
Tth111I	GACNNNGTC	2 cut(s)	224, 349
Van91I	CCANNNNNTGG	1 cut(s)	537
VpaK11BI	GGWCC	6 cut(s)	61, 247, 268, 1302, 2058, 2117
XapI	RAATTY	6 cut(s)	778, 1183, 1456, 1464, 1775, 1994
XbaI	TCTAGA	1 cut(s)	1460
XceI	RCATGY	1 cut(s)	1367
XcmI	CCANNNNNNNNNTGG	2 cut(s)	241, 1198
XmiI	GTMKAC	2 cut(s)	1324, 2092
XspI	CTAG	4 cut(s)	1023, 1461, 1751, 1862
ZraI	GACGTC	2 cut(s)	466, 1852

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.