Prupe.6G236200_v2.0.a1

Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
23708237 .. 23712341
4105 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G236200.2

Sequence Viewer

Length: 2112 bp
ATGATTACGTTTATGGATTCAAAAGAGAAATTGAAGGAGGGGGAGAAGTGCTTAGATCCTCAGCTATGGCATGCCTGTGCTGGAGGCATGGTTCAAATGCCTCCAGTGAATGCCAAGGTCTTCTACTTCCCTCAGGGCCATGCTGAGCATGCCTGTGGACCTGTTGATTTCAGGAACTTCCCGAGGGTTCCTCCATACATCTTCTGCAGGGTCTCTGCTATTAAGTTCATGGCTGATCCTGAGACTGATGAGGTTTATGCAAAAATTAGGTTGGTTCCTTTGAGTGCTAGTGAGGCTGGTTATGAGGATGATGGAATTGGAGGGCTTAATGGGTCTGAAACGCCGGATAAACCCGCCTCATTTGCGAAAACGCTGACGCAATCCGATGCAAACAATGGCGGCGGCTTCTCTGTCCCGAGATATTGTGCAGAAACCATCTTCCCGCGATTGGATTACTCCGCAGATCCCCCTGTTCAGACAATCCTGGCTAAGGATGTTCATGGTGAAACTTGGAAGTTTAGGCACATTTACAGGGGGACCCCTAGGAGGCATCTGTTGACCACAGGGTGGAGTACTTTTGTGAACCATAAGAAGCTTGTTGCAGGGGATTCAATTGTGTTTTTGAGGGCAGAGAATGGTGATCTTTGTGTCGGAATTCGTCGAGCAAAGAGGGGAATTGGAGGTGGACCTGAGTCATCTTCAGGGTGGAATCCAACGGGTGGGAATTGTACCATGCCATATGGTGGATACTCTGCGTTTTTGAGGGAGGATGAGAACAAGCTAATGAGAAATGGCAATGGGAATGGCTCGAATTCGAATGGAAGTCTAATGGGTAAGGGGAAAGTCGGGCCTGAATCGGTTTTTGAAGCCGCAACACTTGCTTCAAATGGACAGCCCTTTGAGGTTGTTTACTACCCTCGAGCAAGTACCCCCGAGTTCTGTGTGAAAGCCTCATTGGTAAAAGCAGCATTGCAGATCCGGTGGTGTCCCGGAATGAGATTCAAGATGGCTTTTGAAACTGAGGATTCTTCCCGGATAAGTTGGTTCATGGGAACTATATCCTCTGTTCAGGTTGCTGAGCCTTTGCGCTGGCCAGAGTCACCTTGGAGGCTTCTCCAGGTTACCTGGGATGAACCTGATTTACTTCAAAATGTGAAGCGCGTTAGCCCATGGTTGGTAGAATTGGTATCAAATATGCCCGCCATCCATCTGACACCCTTCTCACCACCAAGGAAGAAGATGAGACTGCCTCAACACCCTGACTTCCCATTTGAAGGCCAACTTCCTATGCCGACATTCTCCGGCAACCTCCTTGGACCCAGCAGCCCTTTTGGTTGTCTGCCCGACAAAACTCCTGCTGGCATGCAGGGAGCCAGGCATGGTCATTATGGTCTATCCTTATCAGATATGCACCTCAATAAACTGCAGACAGGTCTATTTCCGGCTGGTTTCACGCCTCTTGATCATGCTGCTACAGCAACTAAATTCTCCAATAACACAATGACTCAAAAACCTACCATGAGCGAGAATGTTTCTTGTTTGTTGACGATGGCACATTCTACCCAGACTTCAAAGAAACCTGATGATGTAAAGCCACCGCAGCTCGTACTCTTTGGTCAACCAATACTTACTGAGCAGCAGATTTCTCTGAGCTGCTCTGGTGATACAGTCTCACCAGTTCTTACTGGAAATAGTTCATCGGATGGGAATGCAGAGAAAACCGCTAATCTTTCTGATAATTCTGGATCTGCACTTCACCAACAAAGCCTACAAGAGCGCTCATCTTGTGAAGGTTTCCAATGGTATAAGGATACTCGGCAAGAAACTGAACCGAGTTTGGAAACTGGTCACTGTAAAGTCTTCATGGAATCAGAAGATGTAGGTCGCACTCTTGACCTTTCAGTGTTTGGATCTTACGATGAACTGAATAGGAAACTGGCCGACATGTTTGGCATAGAAAATTCTGAGACGCTAAACCATGTGCTCTATCGAGATGCTACTGGTGCAGTCAAACACATCGGAGATGAACCATTCAGTTGCAGTGACTTCATGAGAACAGCAAGGAGATTGACGATTCTAATGGATTCAGGCAGCAACAATGTAGGAATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

704

Amino Acids

77.23

Weight (kDa)

6.25

Isoelectric Point (pI)

50.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 3 cut(s) 567, 719, 743
AccII CGCG 2 cut(s) 445, 1161
AciI CCGC 9 cut(s) 354, 399, 402, 443, 459, 870, 1200, 1598, 1722
AclWI GGATC 6 cut(s) 50, 230, 458, 970, 1753, 1918
AcoI YGGCCR 2 cut(s) 1091, 1938
AcsI RAATTY 4 cut(s) 654, 811, 1484, 1960
AcuI CTGAAG 1 cut(s) 684
AdeI CACNNNGTG 1 cut(s) 567
AfaI GTAC 4 cut(s) 574, 730, 928, 1608
AfeI AGCGCT 1 cut(s) 1778
AfiI CCNNNNNNNGG 8 cut(s) 448, 490, 546, 567, 719, 743, 1174, 1274
AflIII ACRYGT 1 cut(s) 1944
AjnI CCWGG 4 cut(s) 483, 1116, 1124, 1373
AjuI GAANNNNNNNTTGG 2 cut(s) 938, 970
AloI GAACNNNNNNTCC 2 cut(s) 75, 107
AluBI AGCT 5 cut(s) 64, 595, 781, 1603, 1653
AluI AGCT 5 cut(s) 64, 595, 781, 1603, 1653
Alw21I GWGCWC 1 cut(s) 1986
Alw26I GTCTC 5 cut(s) 217, 236, 1237, 1675, 1961
AlwI GGATC 6 cut(s) 50, 230, 458, 970, 1753, 1918
Ama87I CYCGRG 4 cut(s) 181, 415, 918, 932
Aor51HI AGCGCT 1 cut(s) 1778
AoxI GGCC 5 cut(s) 136, 848, 1091, 1276, 1938
ApeKI GCWGC 7 cut(s) 965, 1323, 1469, 1600, 1636, 1653, 2091
ApoI RAATTY 4 cut(s) 654, 811, 1484, 1960
ArsI GACNNNNNNTTYG 2 cut(s) 1253, 1285
Asp700I GAANNNNTTC 1 cut(s) 1693
AspA2I CCTAGG 1 cut(s) 542
AspLEI GCGC 3 cut(s) 1089, 1161, 1779
AspS9I GGNCC 6 cut(s) 136, 158, 537, 686, 848, 1316
AsuC2I CCSGG 2 cut(s) 990, 1033
AsuHPI GGTGA 7 cut(s) 515, 650, 1092, 1215, 1665, 1673, 1748
AsuII TTCGAA 1 cut(s) 815
AvaI CYCGRG 4 cut(s) 181, 415, 918, 932
AvaII GGWCC 4 cut(s) 158, 537, 686, 1316
AvrII CCTAGG 1 cut(s) 542
AxyI CCTNAGG 1 cut(s) 132
BalI TGGCCA 1 cut(s) 1093
BbsI GAAGAC 2 cut(s) 112, 1852
Bbv12I GWGCWC 1 cut(s) 1986
BbvCI CCTCAGC 1 cut(s) 60
BbvI GCAGC 7 cut(s) 977, 1335, 1456, 1612, 1640, 1648, 2103
BccI CCATC 7 cut(s) 305, 443, 1000, 1211, 1215, 1543, 1697
BciT130I CCWGG 4 cut(s) 485, 1118, 1126, 1375
BciVI GTATCC 2 cut(s) 740, 1804
BclI TGATCA 1 cut(s) 1462
BcnI CCSGG 2 cut(s) 990, 1033
BcoDI GTCTC 5 cut(s) 217, 236, 1237, 1675, 1961
BfaI CTAG 2 cut(s) 288, 543
BfmI CTRYAG 3 cut(s) 205, 1424, 1473
BfoI RGCGCY 1 cut(s) 1780
BfuI GTATCC 2 cut(s) 740, 1804
BlnI CCTAGG 1 cut(s) 542
BlpI GCTNAGC 2 cut(s) 144, 1077
BmcAI AGTACT 1 cut(s) 574
Bme1390I CCNGG 6 cut(s) 485, 990, 1033, 1118, 1126, 1375
Bme18I GGWCC 4 cut(s) 158, 537, 686, 1316
BmeT110I CYCGRG 4 cut(s) 181, 415, 918, 932
BmgT120I GGNCC 6 cut(s) 136, 158, 537, 686, 848, 1316
BmiI GGNNCC 6 cut(s) 189, 276, 538, 539, 1318, 1372
BmrFI CCNGG 6 cut(s) 485, 990, 1033, 1118, 1126, 1375
BmsI GCATC 3 cut(s) 376, 559, 1984
BoxI GACNNNNGTC 1 cut(s) 691
BpiI GAAGAC 2 cut(s) 112, 1852
BplI GAGNNNNNCTC 4 cut(s) 175, 207, 1234, 1266
BpmI CTGGAG 3 cut(s) 87, 102, 1100
Bpu10I CCTNAGC 2 cut(s) 60, 489
Bpu1102I GCTNAGC 2 cut(s) 144, 1077
Bpu14I TTCGAA 1 cut(s) 815
BpuMI CCSGG 2 cut(s) 990, 1033
BsaI GGTCTC 1 cut(s) 217
BsaJI CCNNGG 8 cut(s) 114, 182, 542, 1103, 1125, 1169, 1229, 1312
BsaWI WCCGGW 1 cut(s) 978
BsaXI ACNNNNNCTCC 2 cut(s) 75, 105
Bsc4I CCNNNNNNNGG 8 cut(s) 448, 490, 546, 567, 719, 743, 1174, 1274
Bse1I ACTGG 6 cut(s) 104, 1676, 1690, 1849, 1941, 2005
Bse21I CCTNAGG 1 cut(s) 132
Bse3DI GCAATG 2 cut(s) 802, 968
BseBI CCWGG 4 cut(s) 485, 1118, 1126, 1375
BseDI CCNNGG 8 cut(s) 114, 182, 542, 1103, 1125, 1169, 1229, 1312
BseGI GGATG 6 cut(s) 313, 499, 775, 1135, 1203, 1708
BseLI CCNNNNNNNGG 8 cut(s) 448, 490, 546, 567, 719, 743, 1174, 1274
BseMI GCAATG 2 cut(s) 802, 968
BseNI ACTGG 6 cut(s) 104, 1676, 1690, 1849, 1941, 2005
BseXI GCAGC 7 cut(s) 977, 1335, 1456, 1612, 1640, 1648, 2103
BseYI CCCAGC 1 cut(s) 1319
BsgI GTGCAG 3 cut(s) 447, 1734, 2025
Bsh1236I CGCG 2 cut(s) 445, 1161
BshFI GGCC 5 cut(s) 138, 850, 1093, 1278, 1940
BsiHKAI GWGCWC 1 cut(s) 1986
BsiHKCI CYCGRG 4 cut(s) 181, 415, 918, 932
BsiSI CCGG 6 cut(s) 344, 979, 990, 1033, 1302, 1442
BslFI GGGAC 3 cut(s) 398, 550, 972
BslI CCNNNNNNNGG 8 cut(s) 448, 490, 546, 567, 719, 743, 1174, 1274
BsmAI GTCTC 5 cut(s) 217, 236, 1237, 1675, 1961
BsmBI CGTCTC 1 cut(s) 1961
BsmFI GGGAC 3 cut(s) 398, 550, 972
BsmI GAATGC 2 cut(s) 115, 1714
BsnI GGCC 5 cut(s) 138, 850, 1093, 1278, 1940
Bso31I GGTCTC 1 cut(s) 217
BsoBI CYCGRG 4 cut(s) 181, 415, 918, 932
Bsp119I TTCGAA 1 cut(s) 815
Bsp1286I GDGCHC 1 cut(s) 1986
Bsp143I GATC 8 cut(s) 55, 235, 463, 640, 975, 1462, 1745, 1910
Bsp1720I GCTNAGC 2 cut(s) 144, 1077
Bsp19I CCATGG 1 cut(s) 1169
BspACI CCGC 9 cut(s) 354, 399, 402, 443, 459, 870, 1200, 1598, 1722
BspANI GGCC 5 cut(s) 138, 850, 1093, 1278, 1940
BspFNI CGCG 2 cut(s) 445, 1161
BspHI TCATGA 1 cut(s) 2049
BspLI GGNNCC 6 cut(s) 189, 276, 538, 539, 1318, 1372
BspMAI CTGCAG 2 cut(s) 209, 1428
BspPI GGATC 6 cut(s) 50, 230, 458, 970, 1753, 1918
BspT104I TTCGAA 1 cut(s) 815
BspTNI GGTCTC 1 cut(s) 217
BsrDI GCAATG 2 cut(s) 802, 968
BsrI ACTGG 6 cut(s) 104, 1676, 1690, 1849, 1941, 2005
BssECI CCNNGG 8 cut(s) 114, 182, 542, 1103, 1125, 1169, 1229, 1312
BssMI GATC 8 cut(s) 55, 235, 463, 640, 975, 1462, 1745, 1910
BssT1I CCWWGG 6 cut(s) 114, 542, 1103, 1169, 1229, 1312
Bst2UI CCWGG 4 cut(s) 485, 1118, 1126, 1375
Bst4CI ACNGT 2 cut(s) 1669, 1853
BstAPI GCANNNNNTGC 1 cut(s) 878
BstBI TTCGAA 1 cut(s) 815
BstC8I GCNNGC 6 cut(s) 72, 150, 1091, 1200, 1360, 1364
BstDSI CCRYGG 1 cut(s) 1169
BstEII GGTNACC 1 cut(s) 1120
BstENI CCTNNNNNAGG 1 cut(s) 488
BstF5I GGATG 6 cut(s) 313, 499, 775, 1135, 1203, 1708
BstFNI CGCG 2 cut(s) 445, 1161
BstH2I RGCGCY 1 cut(s) 1780
BstHHI GCGC 3 cut(s) 1089, 1161, 1779
BstKTI GATC 8 cut(s) 58, 238, 466, 643, 978, 1465, 1748, 1913
BstMAI GTCTC 5 cut(s) 217, 236, 1237, 1675, 1961
BstMBI GATC 8 cut(s) 55, 235, 463, 640, 975, 1462, 1745, 1910
BstMWI GCNNNNNNNGC 7 cut(s) 149, 293, 362, 878, 1475, 1600, 2003
BstNI CCWGG 4 cut(s) 485, 1118, 1126, 1375
BstNSI RCATGY 4 cut(s) 74, 152, 1366, 1948
BstPAI GACNNNNGTC 1 cut(s) 691
BstPI GGTNACC 1 cut(s) 1120
BstSCI CCNGG 6 cut(s) 483, 988, 1031, 1116, 1124, 1373
BstSFI CTRYAG 3 cut(s) 205, 1424, 1473
BstUI CGCG 2 cut(s) 445, 1161
BstV1I GCAGC 7 cut(s) 977, 1335, 1456, 1612, 1640, 1648, 2103
BstV2I GAAGAC 2 cut(s) 112, 1852
BstX2I RGATCY 5 cut(s) 55, 463, 975, 1745, 1910
BstYI RGATCY 5 cut(s) 55, 463, 975, 1745, 1910
Bsu36I CCTNAGG 1 cut(s) 132
BsuI GTATCC 2 cut(s) 740, 1804
BsuRI GGCC 5 cut(s) 138, 850, 1093, 1278, 1940
BtgI CCRYGG 1 cut(s) 1169
BtsCI GGATG 6 cut(s) 313, 499, 775, 1135, 1203, 1708
BtsI GCAGTG 1 cut(s) 2047
BtsIMutI CAGTG 4 cut(s) 111, 1849, 1908, 2047
Cac8I GCNNGC 6 cut(s) 72, 150, 1091, 1200, 1360, 1364
CciI TCATGA 1 cut(s) 2049
CfoI GCGC 3 cut(s) 1089, 1161, 1779
Cfr13I GGNCC 6 cut(s) 136, 158, 537, 686, 848, 1316
CseI GACGC 2 cut(s) 385, 1978
Csp6I GTAC 4 cut(s) 573, 729, 927, 1607
CviQI GTAC 4 cut(s) 573, 729, 927, 1607
DpnI GATC 8 cut(s) 57, 237, 465, 642, 977, 1464, 1747, 1912
DpnII GATC 8 cut(s) 55, 235, 463, 640, 975, 1462, 1745, 1910
DraIII CACNNNGTG 1 cut(s) 567
EaeI YGGCCR 2 cut(s) 1091, 1938
Eco130I CCWWGG 6 cut(s) 114, 542, 1103, 1169, 1229, 1312
Eco31I GGTCTC 1 cut(s) 217
Eco47I GGWCC 4 cut(s) 158, 537, 686, 1316
Eco47III AGCGCT 1 cut(s) 1778
Eco57I CTGAAG 1 cut(s) 684
Eco81I CCTNAGG 1 cut(s) 132
Eco88I CYCGRG 4 cut(s) 181, 415, 918, 932
Eco91I GGTNACC 1 cut(s) 1120
EcoNI CCTNNNNNAGG 1 cut(s) 488
EcoO109I RGGNCCY 1 cut(s) 537
EcoO65I GGTNACC 1 cut(s) 1120
EcoRI GAATTC 2 cut(s) 654, 811
EcoRII CCWGG 4 cut(s) 483, 1116, 1124, 1373
EcoT14I CCWWGG 6 cut(s) 114, 542, 1103, 1169, 1229, 1312
ErhI CCWWGG 6 cut(s) 114, 542, 1103, 1169, 1229, 1312
Esp3I CGTCTC 1 cut(s) 1961
FalI AAGNNNNNCTT 2 cut(s) 1266, 1298
FaqI GGGAC 3 cut(s) 398, 550, 972
FauI CCCGC 3 cut(s) 361, 450, 1207
FauNDI CATATG 1 cut(s) 739
FbaI TGATCA 1 cut(s) 1462
FokI GGATG 6 cut(s) 320, 506, 782, 1142, 1190, 1715
FspBI CTAG 2 cut(s) 288, 543
GlaI GCGC 3 cut(s) 1088, 1160, 1778
GsaI CCCAGC 1 cut(s) 1323
GsuI CTGGAG 3 cut(s) 87, 102, 1100
HaeII RGCGCY 1 cut(s) 1780
HaeIII GGCC 5 cut(s) 138, 850, 1093, 1278, 1940
HapII CCGG 6 cut(s) 344, 979, 990, 1033, 1302, 1442
HgaI GACGC 2 cut(s) 385, 1978
HhaI GCGC 3 cut(s) 1089, 1161, 1779
Hin6I GCGC 3 cut(s) 1087, 1159, 1777
HinP1I GCGC 3 cut(s) 1087, 1159, 1777
HincII GTYRAC 3 cut(s) 558, 1545, 1619
HindII GTYRAC 3 cut(s) 558, 1545, 1619
HindIII AAGCTT 1 cut(s) 593
HpaII CCGG 6 cut(s) 344, 979, 990, 1033, 1302, 1442
HphI GGTGA 7 cut(s) 515, 650, 1092, 1215, 1665, 1673, 1748
Hpy166II GTNNAC 7 cut(s) 158, 558, 583, 686, 910, 1545, 1619
Hpy8I GTNNAC 7 cut(s) 158, 558, 583, 686, 910, 1545, 1619
Hpy99I CGWCG 1 cut(s) 663
HpyAV CCTTC 4 cut(s) 28, 1228, 1268, 1784
HpyCH4III ACNGT 2 cut(s) 1669, 1853
HpyCH4IV ACGT 1 cut(s) 8
HpyF10VI GCNNNNNNNGC 7 cut(s) 149, 293, 362, 878, 1475, 1600, 2003
HpySE526I ACGT 1 cut(s) 8
HspAI GCGC 3 cut(s) 1087, 1159, 1777
KflI GGGWCCC 1 cut(s) 537
Ksp22I TGATCA 1 cut(s) 1462
Kzo9I GATC 8 cut(s) 55, 235, 463, 640, 975, 1462, 1745, 1910
LmnI GCTCC 1 cut(s) 1370
Lsp1109I GCAGC 7 cut(s) 977, 1335, 1456, 1612, 1640, 1648, 2103
LweI GCATC 3 cut(s) 376, 559, 1984
MaeI CTAG 2 cut(s) 288, 543
MaeII ACGT 1 cut(s) 8
MaeIII GTNAC 4 cut(s) 1098, 1120, 1847, 2042
MalI GATC 8 cut(s) 57, 237, 465, 642, 977, 1464, 1747, 1912
MboI GATC 8 cut(s) 55, 235, 463, 640, 975, 1462, 1745, 1910
MboII GAAGA 9 cut(s) 112, 193, 430, 690, 1020, 1246, 1249, 1852, 1886
MfeI CAATTG 1 cut(s) 612
MflI RGATCY 5 cut(s) 55, 463, 975, 1745, 1910
MhlI GDGCHC 1 cut(s) 1986
MlsI TGGCCA 1 cut(s) 1093
MluNI TGGCCA 1 cut(s) 1093
MlyI GAGTC 3 cut(s) 701, 1106, 1498
MmeI TCCRAC 2 cut(s) 631, 737
Mox20I TGGCCA 1 cut(s) 1093
MroXI GAANNNNTTC 1 cut(s) 1693
MscI TGGCCA 1 cut(s) 1093
MseI TTAA 2 cut(s) 222, 327
MslI CAYNNNNRTG 2 cut(s) 75, 153
Msp20I TGGCCA 1 cut(s) 1093
MspI CCGG 6 cut(s) 344, 979, 990, 1033, 1302, 1442
MspR9I CCNGG 6 cut(s) 485, 990, 1033, 1118, 1126, 1375
MunI CAATTG 1 cut(s) 612
Mva1269I GAATGC 2 cut(s) 115, 1714
MvaI CCWGG 4 cut(s) 485, 1118, 1126, 1375
MvnI CGCG 2 cut(s) 445, 1161
MwoI GCNNNNNNNGC 7 cut(s) 149, 293, 362, 878, 1475, 1600, 2003
NciI CCSGG 2 cut(s) 990, 1033
NcoI CCATGG 1 cut(s) 1169
NdeI CATATG 1 cut(s) 739
NdeII GATC 8 cut(s) 55, 235, 463, 640, 975, 1462, 1745, 1910
NlaIV GGNNCC 6 cut(s) 189, 276, 538, 539, 1318, 1372
NmeAIII GCCGAG 1 cut(s) 1795
NmuCI GTSAC 3 cut(s) 1098, 1847, 2042
NspI RCATGY 4 cut(s) 74, 152, 1366, 1948
NspV TTCGAA 1 cut(s) 815
PaeI GCATGC 3 cut(s) 74, 152, 1366
PaeR7I CTCGAG 1 cut(s) 918
PagI TCATGA 1 cut(s) 2049
PciI ACATGT 1 cut(s) 1944
PctI GAATGC 2 cut(s) 115, 1714
PdmI GAANNNNTTC 1 cut(s) 1693
PfeI GAWTC 9 cut(s) 17, 608, 709, 854, 999, 1025, 1868, 2074, 2084
PflMI CCANNNNNTGG 3 cut(s) 567, 719, 743
PfoI TCCNGGA 2 cut(s) 988, 1031
PleI GAGTC 3 cut(s) 700, 1105, 1498
PpsI GAGTC 3 cut(s) 700, 1105, 1498
PpuMI RGGWCCY 1 cut(s) 537
PscI ACATGT 1 cut(s) 1944
PshAI GACNNNNGTC 1 cut(s) 691
Psp5II RGGWCCY 1 cut(s) 537
Psp6I CCWGG 4 cut(s) 483, 1116, 1124, 1373
PspEI GGTNACC 1 cut(s) 1120
PspFI CCCAGC 1 cut(s) 1319
PspGI CCWGG 4 cut(s) 483, 1116, 1124, 1373
PspN4I GGNNCC 6 cut(s) 189, 276, 538, 539, 1318, 1372
PspPI GGNCC 6 cut(s) 136, 158, 537, 686, 848, 1316
PspPPI RGGWCCY 1 cut(s) 537
PspXI VCTCGAGB 1 cut(s) 918
PsrI GAACNNNNNNTAC 2 cut(s) 1125, 1157
PstI CTGCAG 2 cut(s) 209, 1428
PsuI RGATCY 5 cut(s) 55, 463, 975, 1745, 1910
RsaI GTAC 4 cut(s) 574, 730, 928, 1608
RsaNI GTAC 4 cut(s) 573, 729, 927, 1607
RseI CAYNNNNRTG 2 cut(s) 75, 153
SaqAI TTAA 2 cut(s) 222, 327
Sau3AI GATC 8 cut(s) 55, 235, 463, 640, 975, 1462, 1745, 1910
Sau96I GGNCC 6 cut(s) 136, 158, 537, 686, 848, 1316
ScaI AGTACT 1 cut(s) 574
SchI GAGTC 3 cut(s) 701, 1106, 1498
ScrFI CCNGG 6 cut(s) 485, 990, 1033, 1118, 1126, 1375
SduI GDGCHC 1 cut(s) 1986
SfaNI GCATC 3 cut(s) 376, 559, 1984
SfcI CTRYAG 3 cut(s) 205, 1424, 1473
Sfr274I CTCGAG 1 cut(s) 918
SfuI TTCGAA 1 cut(s) 815
SinI GGWCC 4 cut(s) 158, 537, 686, 1316
SlaI CTCGAG 1 cut(s) 918
SmiMI CAYNNNNRTG 2 cut(s) 75, 153
SmlI CTYRAG 1 cut(s) 918
SmoI CTYRAG 1 cut(s) 918
SphI GCATGC 3 cut(s) 74, 152, 1366
SsiI CCGC 9 cut(s) 354, 399, 402, 443, 459, 870, 1200, 1598, 1722
SspMI CTAG 2 cut(s) 288, 543
StyD4I CCNGG 6 cut(s) 483, 988, 1031, 1116, 1124, 1373
StyI CCWWGG 6 cut(s) 114, 542, 1103, 1169, 1229, 1312
TaaI ACNGT 2 cut(s) 1669, 1853
TaiI ACGT 1 cut(s) 11
TaqI TCGA 5 cut(s) 661, 809, 815, 919, 1990
TatI WGTACW 1 cut(s) 572
TauI GCSGC 3 cut(s) 402, 405, 872
TfiI GAWTC 9 cut(s) 17, 608, 709, 854, 999, 1025, 1868, 2074, 2084
Tru1I TTAA 2 cut(s) 222, 327
Tru9I TTAA 2 cut(s) 222, 327
TscAI CASTG 4 cut(s) 111, 1856, 1908, 2047
TseFI GTSAC 3 cut(s) 1098, 1847, 2042
TseI GCWGC 7 cut(s) 965, 1323, 1469, 1600, 1636, 1653, 2091
Tsp45I GTSAC 3 cut(s) 1098, 1847, 2042
TspDTI ATGAA 9 cut(s) 217, 488, 1036, 1146, 1686, 1852, 1935, 2038, 2040
TspRI CASTG 4 cut(s) 111, 1856, 1908, 2047
Van91I CCANNNNNTGG 3 cut(s) 567, 719, 743
VpaK11BI GGWCC 4 cut(s) 158, 537, 686, 1316
XagI CCTNNNNNAGG 1 cut(s) 488
XapI RAATTY 4 cut(s) 654, 811, 1484, 1960
XceI RCATGY 4 cut(s) 74, 152, 1366, 1948
XcmI CCANNNNNNNNNTGG 1 cut(s) 1101
XhoI CTCGAG 1 cut(s) 918
XmaJI CCTAGG 1 cut(s) 542
XmnI GAANNNNTTC 1 cut(s) 1693
XspI CTAG 2 cut(s) 288, 543
ZrmI AGTACT 1 cut(s) 574
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.