Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0002309

Physical Location & Seq

Genomic Coordinates Forward (+)

63335057 .. 63338189

Gene Structure 3133 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G036140.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2103 bp

ATGAAGGACATGGAGAAAAGCTTGGATCCTCAGCTATGGCACGCCTGCGCCGGCGGCATGGTCCAAATGCCTCCGGTGAACTCCAAAGTCTTCTACTTTCCTCAAGGCCACGCCGAGCACGCCCAAACCCACGTCGATTTCCCCGCTTCCTCCGTCAGAATCCCACCTCTCATTCTCTGCCGCGTCGCCGGAATCAGATACATGGCCGACCCGGAAACCGACGAGGTCTTCGCCAGAATCCGGCTGGTCCCTTCCGAGAGCAACGAGGTTTTTGCTCAGGACCAAGGCTCTGTGGACTCTGATGGGTCTGGGAATCCGGAAAAGCCTTCTTCTTTCGCTAAGACTCTGACCCAGTCCGACGCCAACAATGGCGGCGGATTCTCCGTCCCGAGATACTGCGCCGAGACCATTTTCCCGAGGCTGGACTACTCCGCCGACCCGCCCGTGCAGACGGTGATCGCCAAGGACGTCCACGGCGAGGTGTGGAAGTTCCGGCACATTTACCGAGGGACCCCTCGCCGGCATTTGCTGACCACCGGGTGGAGCACGTTCGTGAACCAGAAGAAGCTCGTCGCCGGCGACTCGATTGTGTTCCTGCGAGCCGAAAACGGCGACCTCTGCGTCGGGATTCGGAGGGCCAAGCGGGGGTCGCCGGAGGGGTCGTCGGAATCGGGGTGGAACCACGGCGGTTCTGGGGGAGGGTCGGGTTTGCCGTATTCCGGGTTCTCGGTGTTTCTGAAAGATGAAGAGAGCAAAATGGGGAGAAATAATGGGTTTGGGAATTCGAGTCTGAATAATGGGAAGGTGAGAGGGGGCAGAGGAGGAGGAAGAGTGAGGCCTGAGGCTGTGGTGGAGGCTGCCACTCTTGCGGCCAATGGACAGCCGTTTGAGGTGGTTTATTATCCGAGAGCCAGCACGCCGGAGTTTGTGGTGCAGTGGTGCTCAGGCATGAGGTTTAAGATGGCCTTTGAGACTGAGGACTCTTCTAGGATTAGTTGGTTCATGGGAACCATAGCTTCTGTTGATGTTAATGATAAAATCCGCTGGCCTAATTCTCCTTGGAGAGTTCTACAGGTGACATGGGATGAGCCAGATTTGTTACAGAATGTGAAGTGTGTCAGCCCATGGTTGATTGAGCTGGTATCAAATTTTCCCATTATCCACATGGCGCCCTTTTCACCGCCACGGAAGAAGTTGCGTATCCCGCAACACCCAGACTTTGACGGGCAGTTAACGTTGCCATCATTTTCAGGCAACCCCCTCGGGTCCAGCAGCCCCATGTGTTGTCTACCAGATAACACTCCTGCAGGCATACAGGGAGCCAGGCATGCTCAACTTAGAATATCTTTATCAGATCTCCACTTTAACAGCAAACTGCAGTCGGGGCTGTTCTCGTCCAGTTTCCAGAGGTTCGATCAAAATTCTAGAATTCCCAATGGCATCAGGAACGGCCACACAAACAGCAACGAAAGCCTATCTTGCTTGCTAACAATGGGAAGTTCTAATCAGAACTTGGGGAAATCTGATGATGTGAAGAAACACCAGTTTTTACTCTTTGGTCAACCAATAATTACTGAGCAGCAGATCTCTCGTAGCTGCTCCAGTGATGCAGTTTCACAATTTCTTGCTGGTAATAATTTGAAAGATGAGAATCAAGGCAGAAAAAGGTTTCTATCCGTTGGTTCAGACTCTGCTCTTGAGCGCTGGGTTTCACTAGAGAAATCTGCATTGAACGAGGAATTTCAAGCTATTGATGTGGATACCGGTCATTGCAAGGTATTCATGGAGTCCGAGGATGTTGGAAGGACTCTTGACCTCTCAGCTTTAGGCTCTTATGATGAGTTATACAGGAGGCTGACCATCATGTTTGGATTAGAAAAACCGGAAATGCTGAGCCATGTTCTTTACCGAGATCCAACAGGTGTCGTTAAACAAACTGGAGATGAACCATTCGGTGAATTTAAGAAAACAGCAAAGAGACTGACTATTCTAACACGTCCGGCCAATGAAACTATTGGAAGGACATGGATTAGAGGAATGGAAAATGCTGAAAGTAGACTTGGTGCGTCAAACAAGACTGGTCCTTTGAGCATATTTGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Auxin_resp B3

Protein Analysis

700

Amino Acids

77.22

Weight (kDa)

7.61

Isoelectric Point (pI)

43.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B3	PF02362	112 - 213	1.6e-23	B3 DNA binding domain
ARF_AD	PF06507	311 - 381	4.3e-29	Auxin response factor ancillary domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002309)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G28350 AT2G28350
fragaria_vesca	FvH4_3g32000 FvH4_3g32000 FvH4_6g15960 FvH4_6g15960 FvH4_6g15960
malus_domestica	MD03G1119500.v1.1 MD03G1119700.v1.1 MD04G1096900.v1.1
prunus_persica	Prupe.6G102800_v2.0.a1 Prupe.6G102800_v2.0.a1 Prupe.6G102800_v2.0.a1 Prupe.6G236200_v2.0.a1 Prupe.6G236200_v2.0.a1 Prupe.6G236200_v2.0.a1
pyrus_communis	pycom04g09200 pycom11g11370 pycom12g11700
rosa_chinensis	RchiOBHm_Chr3g0469661 RchiOBHm_Chr5g0058761
rosa_laevigata	RLG00000024330 RLG00000035245
rosa_multiflora	Rmu_sc0000367.1_g000238 Rmu_sc0006483.1_g000023 Rmu_sc0030116.1_g000001
rosa_roxburghii	Rroxscaffold_1G00021650 Rroxscaffold_6G00411580
rosa_rugosa	Rorug03G0103100 Rorug03G0103200 Rorug03G0103300 Rorug05G0317900
rosa_samantha	Rh3AG152700 Rh3BG176500 Rh3CG167500 Rh3DG199100 Rh5AG383600 Rh5BG395500 Rh5CG419200 Rh5DG410900
rosa_wichuraiana	Rw3G014400 Rw5G036140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	620
AatII	GACGTC	1 cut(s)	471
AccB1I	GGYRCC	1 cut(s)	1168
AccB7I	CCANNNNNTGG	1 cut(s)	540
AccI	GTMKAC	2 cut(s)	1288, 2056
AccII	CGCG	1 cut(s)	183
AccIII	TCCGGA	1 cut(s)	316
AclI	AACGTT	1 cut(s)	1235
AclWI	GGATC	3 cut(s)	20, 33, 1907
AcoI	YGGCCR	4 cut(s)	204, 870, 1450, 2001
AcsI	RAATTY	6 cut(s)	781, 1147, 1420, 1428, 1739, 1958
AcyI	GRCGYC	3 cut(s)	360, 468, 1169
AdeI	CACNNNGTG	1 cut(s)	540
AfeI	AGCGCT	1 cut(s)	1703
AfiI	CCNNNNNNNGG	7 cut(s)	240, 421, 478, 519, 540, 645, 719
AflIII	ACRYGT	1 cut(s)	1994
AgeI	ACCGGT	1 cut(s)	1763
AgsI	TTSAA	3 cut(s)	1642, 1732, 1745
AjiI	CACGTC	2 cut(s)	133, 1997
AjnI	CCWGG	1 cut(s)	1322
AjuI	GAANNNNNNNTTGG	2 cut(s)	2043, 2075
AleI	CACNNNNGTG	1 cut(s)	551
AluBI	AGCT	8 cut(s)	21, 34, 568, 1016, 1138, 1596, 1748, 1823
AluI	AGCT	8 cut(s)	21, 34, 568, 1016, 1138, 1596, 1748, 1823
Alw21I	GWGCWC	3 cut(s)	120, 548, 944
Alw26I	GTCTC	3 cut(s)	398, 965, 1972
AlwI	GGATC	3 cut(s)	20, 33, 1907
AlwNI	CAGNNNCTG	1 cut(s)	1691
Ama87I	CYCGRG	3 cut(s)	388, 415, 1262
Aor13HI	TCCGGA	1 cut(s)	316
Aor51HI	AGCGCT	1 cut(s)	1703
AoxI	GGCC	9 cut(s)	106, 204, 636, 836, 870, 963, 1046, 1450, 2001
ApeKI	GCWGC	4 cut(s)	857, 1272, 1579, 1596
ApoI	RAATTY	6 cut(s)	781, 1147, 1420, 1428, 1739, 1958
ArsI	GACNNNNNNTTYG	4 cut(s)	212, 244, 2068, 2100
AsiGI	ACCGGT	1 cut(s)	1763
AspLEI	GCGC	4 cut(s)	50, 401, 1171, 1704
AspS9I	GGNCC	7 cut(s)	61, 247, 280, 510, 636, 1266, 2081
AsuC2I	CCSGG	3 cut(s)	212, 538, 721
AsuHPI	GGTGA	6 cut(s)	88, 466, 817, 1087, 1170, 1967
AvaI	CYCGRG	3 cut(s)	388, 415, 1262
AvaII	GGWCC	6 cut(s)	61, 247, 280, 510, 1266, 2081
AxyI	CCTNAGG	1 cut(s)	840
BamHI	GGATCC	1 cut(s)	25
BanI	GGYRCC	1 cut(s)	1168
BbsI	GAAGAC	2 cut(s)	82, 220
Bbv12I	GWGCWC	3 cut(s)	120, 548, 944
BbvCI	CCTCAGC	1 cut(s)	30
BbvI	GCAGC	4 cut(s)	844, 1284, 1583, 1591
BccI	CCATC	4 cut(s)	296, 955, 1249, 1868
BceAI	ACGGC	6 cut(s)	490, 625, 697, 700, 868, 1465
BcgI	CGANNNNNNTGC	6 cut(s)	254, 288, 1243, 1277, 1571, 1605
BciT130I	CCWGG	1 cut(s)	1324
BciVI	GTATCC	2 cut(s)	1211, 1753
BcnI	CCSGG	3 cut(s)	212, 538, 721
BcoDI	GTCTC	3 cut(s)	398, 965, 1972
BfaI	CTAG	3 cut(s)	987, 1425, 1715
BfmI	CTRYAG	3 cut(s)	1070, 1305, 1376
BfoI	RGCGCY	2 cut(s)	1172, 1705
BfuI	GTATCC	2 cut(s)	1211, 1753
BglII	AGATCT	2 cut(s)	1354, 1584
BisI	GCNGC	8 cut(s)	55, 181, 373, 858, 870, 1273, 1580, 1597
BlpI	GCTNAGC	1 cut(s)	1892
BlsI	GCNGC	8 cut(s)	56, 182, 374, 859, 871, 1274, 1581, 1598
Bme1390I	CCNGG	4 cut(s)	212, 538, 721, 1324
Bme18I	GGWCC	6 cut(s)	61, 247, 280, 510, 1266, 2081
BmeT110I	CYCGRG	3 cut(s)	388, 415, 1262
BmgBI	CACGTC	2 cut(s)	133, 1997
BmgT120I	GGNCC	7 cut(s)	61, 247, 280, 510, 636, 1266, 2081
BmiI	GGNNCC	9 cut(s)	27, 249, 511, 512, 680, 1009, 1170, 1267, 1321
BmrFI	CCNGG	4 cut(s)	212, 538, 721, 1324
BmrI	ACTGGG	1 cut(s)	346
BmsI	GCATC	2 cut(s)	1449, 1597
BmuI	ACTGGG	1 cut(s)	346
BpiI	GAAGAC	2 cut(s)	82, 220
BpmI	CTGGAG	2 cut(s)	1585, 1959
Bpu10I	CCTNAGC	3 cut(s)	30, 276, 943
Bpu1102I	GCTNAGC	1 cut(s)	1892
BpuEI	CTTGAG	2 cut(s)	87, 1718
BpuMI	CCSGG	3 cut(s)	212, 538, 721
BsaBI	GATNNNNATC	1 cut(s)	1650
BsaHI	GRCGYC	3 cut(s)	360, 468, 1169
BsaI	GGTCTC	1 cut(s)	398
BsaWI	WCCGGW	4 cut(s)	73, 316, 1763, 1882
BsaXI	ACNNNNNCTCC	4 cut(s)	647, 677, 816, 846
Bsc4I	CCNNNNNNNGG	7 cut(s)	240, 421, 478, 519, 540, 645, 719
Bse118I	RCCGGY	4 cut(s)	50, 519, 575, 1763
Bse1I	ACTGG	6 cut(s)	352, 1398, 1543, 1602, 1942, 2083
Bse21I	CCTNAGG	1 cut(s)	840
Bse3DI	GCAATG	1 cut(s)	1768
Bse8I	GATNNNNATC	1 cut(s)	1650
BseAI	TCCGGA	1 cut(s)	316
BseBI	CCWGG	1 cut(s)	1324
BseGI	GGATG	2 cut(s)	1090, 1801
BseJI	GATNNNNATC	1 cut(s)	1650
BseLI	CCNNNNNNNGG	7 cut(s)	240, 421, 478, 519, 540, 645, 719
BseMI	GCAATG	1 cut(s)	1768
BseMII	CTCAG	8 cut(s)	44, 290, 831, 957, 966, 1566, 1833, 1883
BseNI	ACTGG	6 cut(s)	352, 1398, 1543, 1602, 1942, 2083
BseRI	GAGGAG	2 cut(s)	834, 837
BseXI	GCAGC	4 cut(s)	844, 1284, 1583, 1591
BseYI	CCCAGC	1 cut(s)	1704
BsgI	GTGCAG	2 cut(s)	467, 953
Bsh1236I	CGCG	1 cut(s)	183
BshFI	GGCC	9 cut(s)	108, 206, 638, 838, 872, 965, 1048, 1452, 2003
BshNI	GGYRCC	1 cut(s)	1168
BshTI	ACCGGT	1 cut(s)	1763
BsiHKAI	GWGCWC	3 cut(s)	120, 548, 944
BsiHKCI	CYCGRG	3 cut(s)	388, 415, 1262
BslFI	GGGAC	3 cut(s)	233, 371, 523
BslI	CCNNNNNNNGG	7 cut(s)	240, 421, 478, 519, 540, 645, 719
BsmAI	GTCTC	3 cut(s)	398, 965, 1972
BsmFI	GGGAC	3 cut(s)	233, 371, 523
BsnI	GGCC	9 cut(s)	108, 206, 638, 838, 872, 965, 1048, 1452, 2003
Bso31I	GGTCTC	1 cut(s)	398
BsoBI	CYCGRG	3 cut(s)	388, 415, 1262
Bsp1286I	GDGCHC	3 cut(s)	120, 548, 944
Bsp13I	TCCGGA	1 cut(s)	316
Bsp143I	GATC	6 cut(s)	25, 456, 1354, 1414, 1584, 1912
Bsp1720I	GCTNAGC	1 cut(s)	1892
Bsp19I	CCATGG	1 cut(s)	1124
BspANI	GGCC	9 cut(s)	108, 206, 638, 838, 872, 965, 1048, 1452, 2003
BspCNI	CTCAG	8 cut(s)	43, 289, 832, 956, 967, 1567, 1832, 1884
BspEI	TCCGGA	1 cut(s)	316
BspFNI	CGCG	1 cut(s)	183
BspLI	GGNNCC	9 cut(s)	27, 249, 511, 512, 680, 1009, 1170, 1267, 1321
BspMAI	CTGCAG	2 cut(s)	1309, 1380
BspPI	GGATC	3 cut(s)	20, 33, 1907
BspT107I	GGYRCC	1 cut(s)	1168
BspTNI	GGTCTC	1 cut(s)	398
BsrDI	GCAATG	1 cut(s)	1768
BsrFI	RCCGGY	4 cut(s)	50, 519, 575, 1763
BsrI	ACTGG	6 cut(s)	352, 1398, 1543, 1602, 1942, 2083
BssAI	RCCGGY	4 cut(s)	50, 519, 575, 1763
BssMI	GATC	6 cut(s)	25, 456, 1354, 1414, 1584, 1912
BssNI	GRCGYC	3 cut(s)	360, 468, 1169
BssT1I	CCWWGG	4 cut(s)	283, 462, 1058, 1124
Bst2UI	CCWGG	1 cut(s)	1324
Bst4CI	ACNGT	1 cut(s)	454
Bst6I	CTCTTC	3 cut(s)	741, 823, 988
BstACI	GRCGYC	3 cut(s)	360, 468, 1169
BstDSI	CCRYGG	4 cut(s)	472, 682, 1124, 1184
BstF5I	GGATG	2 cut(s)	1090, 1801
BstFNI	CGCG	1 cut(s)	183
BstH2I	RGCGCY	2 cut(s)	1172, 1705
BstHHI	GCGC	4 cut(s)	50, 401, 1171, 1704
BstKTI	GATC	6 cut(s)	28, 459, 1357, 1417, 1587, 1915
BstMAI	GTCTC	3 cut(s)	398, 965, 1972
BstMBI	GATC	6 cut(s)	25, 456, 1354, 1414, 1584, 1912
BstNI	CCWGG	1 cut(s)	1324
BstNSI	RCATGY	1 cut(s)	1331
BstSCI	CCNGG	4 cut(s)	210, 536, 719, 1322
BstSFI	CTRYAG	3 cut(s)	1070, 1305, 1376
BstUI	CGCG	1 cut(s)	183
BstV1I	GCAGC	4 cut(s)	844, 1284, 1583, 1591
BstV2I	GAAGAC	2 cut(s)	82, 220
BstX2I	RGATCY	4 cut(s)	25, 1354, 1584, 1912
BstYI	RGATCY	4 cut(s)	25, 1354, 1584, 1912
Bsu36I	CCTNAGG	1 cut(s)	840
BsuI	GTATCC	2 cut(s)	1211, 1753
BsuRI	GGCC	9 cut(s)	108, 206, 638, 838, 872, 965, 1048, 1452, 2003
BtgI	CCRYGG	4 cut(s)	472, 682, 1124, 1184
BtrI	CACGTC	2 cut(s)	133, 1997
BtsCI	GGATG	2 cut(s)	1090, 1801
BtsI	GCAGTG	1 cut(s)	941
BtsIMutI	CAGTG	2 cut(s)	941, 1609
CaiI	CAGNNNCTG	1 cut(s)	1691
CfoI	GCGC	4 cut(s)	50, 401, 1171, 1704
Cfr10I	RCCGGY	4 cut(s)	50, 519, 575, 1763
Cfr13I	GGNCC	7 cut(s)	61, 247, 280, 510, 636, 1266, 2081
CseI	GACGC	4 cut(s)	172, 368, 610, 2055
CspAI	ACCGGT	1 cut(s)	1763
DinI	GGCGCC	1 cut(s)	1170
DpnI	GATC	6 cut(s)	27, 458, 1356, 1416, 1586, 1914
DpnII	GATC	6 cut(s)	25, 456, 1354, 1414, 1584, 1912
DraIII	CACNNNGTG	1 cut(s)	540
DrdI	GACNNNNNNGTC	1 cut(s)	620
DseDI	GACNNNNNNGTC	1 cut(s)	620
EaeI	YGGCCR	4 cut(s)	204, 870, 1450, 2001
Eam1104I	CTCTTC	3 cut(s)	741, 823, 988
EarI	CTCTTC	3 cut(s)	741, 823, 988
EciI	GGCGGA	2 cut(s)	390, 421
Eco130I	CCWWGG	4 cut(s)	283, 462, 1058, 1124
Eco147I	AGGCCT	1 cut(s)	838
Eco31I	GGTCTC	1 cut(s)	398
Eco47I	GGWCC	6 cut(s)	61, 247, 280, 510, 1266, 2081
Eco47III	AGCGCT	1 cut(s)	1703
Eco81I	CCTNAGG	1 cut(s)	840
Eco88I	CYCGRG	3 cut(s)	388, 415, 1262
EcoO109I	RGGNCCY	1 cut(s)	510
EcoRI	GAATTC	2 cut(s)	781, 1428
EcoRII	CCWGG	1 cut(s)	1322
EcoT14I	CCWWGG	4 cut(s)	283, 462, 1058, 1124
EgeI	GGCGCC	1 cut(s)	1170
EheI	GGCGCC	1 cut(s)	1170
ErhI	CCWWGG	4 cut(s)	283, 462, 1058, 1124
FalI	AAGNNNNNCTT	4 cut(s)	950, 982, 1462, 1494
FaqI	GGGAC	3 cut(s)	233, 371, 523
FauI	CCCGC	4 cut(s)	151, 447, 636, 1212
FblI	GTMKAC	2 cut(s)	1288, 2056
Fnu4HI	GCNGC	8 cut(s)	55, 181, 373, 858, 870, 1273, 1580, 1597
FokI	GGATG	2 cut(s)	1097, 1808
Fsp4HI	GCNGC	8 cut(s)	55, 181, 373, 858, 870, 1273, 1580, 1597
FspBI	CTAG	3 cut(s)	987, 1425, 1715
GlaI	GCGC	4 cut(s)	49, 400, 1170, 1703
GluI	GCNGC	8 cut(s)	55, 181, 373, 858, 870, 1273, 1580, 1597
GsaI	CCCAGC	1 cut(s)	1708
GsuI	CTGGAG	2 cut(s)	1585, 1959
HaeII	RGCGCY	2 cut(s)	1172, 1705
HaeIII	GGCC	9 cut(s)	108, 206, 638, 838, 872, 965, 1048, 1452, 2003
HgaI	GACGC	4 cut(s)	172, 368, 610, 2055
HhaI	GCGC	4 cut(s)	50, 401, 1171, 1704
Hin1I	GRCGYC	3 cut(s)	360, 468, 1169
Hin6I	GCGC	4 cut(s)	48, 399, 1169, 1702
HinP1I	GCGC	4 cut(s)	48, 399, 1169, 1702
HincII	GTYRAC	2 cut(s)	1233, 1562
HindII	GTYRAC	2 cut(s)	1233, 1562
HindIII	AAGCTT	1 cut(s)	19
HpaI	GTTAAC	1 cut(s)	1233
HphI	GGTGA	6 cut(s)	88, 466, 817, 1087, 1170, 1967
Hpy166II	GTNNAC	8 cut(s)	79, 295, 472, 556, 1233, 1289, 1562, 2057
Hpy8I	GTNNAC	8 cut(s)	79, 295, 472, 556, 1233, 1289, 1562, 2057
Hpy99I	CGWCG	7 cut(s)	137, 188, 224, 362, 575, 626, 667
HpyAV	CCTTC	5 cut(s)	261, 336, 796, 1797, 2013
HpyCH4III	ACNGT	1 cut(s)	454
HpyCH4IV	ACGT	5 cut(s)	132, 468, 548, 1235, 1996
HpyCH4V	TGCA	7 cut(s)	448, 934, 1307, 1378, 1610, 1727, 1773
HpySE526I	ACGT	5 cut(s)	132, 468, 548, 1235, 1996
Hsp92I	GRCGYC	3 cut(s)	360, 468, 1169
HspAI	GCGC	4 cut(s)	48, 399, 1169, 1702
KasI	GGCGCC	1 cut(s)	1168
KflI	GGGWCCC	1 cut(s)	510
Kpn2I	TCCGGA	1 cut(s)	316
KroI	GCCGGC	3 cut(s)	50, 519, 575
KroNI	GCCGGC	3 cut(s)	52, 521, 577
KspAI	GTTAAC	1 cut(s)	1233
Kzo9I	GATC	6 cut(s)	25, 456, 1354, 1414, 1584, 1912
LmnI	GCTCC	3 cut(s)	543, 1319, 1604
Lsp1109I	GCAGC	4 cut(s)	844, 1284, 1583, 1591
LweI	GCATC	2 cut(s)	1449, 1597
MaeI	CTAG	3 cut(s)	987, 1425, 1715
MaeII	ACGT	5 cut(s)	132, 468, 548, 1235, 1996
MaeIII	GTNAC	2 cut(s)	1075, 1098
MalI	GATC	6 cut(s)	27, 458, 1356, 1416, 1586, 1914
MboI	GATC	6 cut(s)	25, 456, 1354, 1414, 1584, 1912
MboII	GAAGA	9 cut(s)	82, 220, 321, 574, 758, 840, 975, 1201, 1546
MflI	RGATCY	4 cut(s)	25, 1354, 1584, 1912
MhlI	GDGCHC	3 cut(s)	120, 548, 944
Mly113I	GGCGCC	1 cut(s)	1169
MlyI	GAGTC	8 cut(s)	290, 337, 575, 796, 974, 1682, 1796, 1801
MmeI	TCCRAC	4 cut(s)	381, 645, 1780, 1940
MreI	CGCCGGCG	2 cut(s)	50, 575
MroI	TCCGGA	1 cut(s)	316
MroNI	GCCGGC	3 cut(s)	50, 519, 575
MseI	TTAA	6 cut(s)	957, 1029, 1232, 1365, 1929, 1962
MslI	CAYNNNNRTG	1 cut(s)	551
MspA1I	CMGCKG	1 cut(s)	1044
MspR9I	CCNGG	4 cut(s)	212, 538, 721, 1324
MvaI	CCWGG	1 cut(s)	1324
MvnI	CGCG	1 cut(s)	183
NaeI	GCCGGC	3 cut(s)	52, 521, 577
NarI	GGCGCC	1 cut(s)	1169
NciI	CCSGG	3 cut(s)	212, 538, 721
NcoI	CCATGG	1 cut(s)	1124
NdeII	GATC	6 cut(s)	25, 456, 1354, 1414, 1584, 1912
NgoMIV	GCCGGC	3 cut(s)	50, 519, 575
NlaIV	GGNNCC	9 cut(s)	27, 249, 511, 512, 680, 1009, 1170, 1267, 1321
NmeAIII	GCCGAG	2 cut(s)	139, 427
NmuCI	GTSAC	1 cut(s)	1075
NspI	RCATGY	1 cut(s)	1331
OliI	CACNNNNGTG	1 cut(s)	551
PaeI	GCATGC	1 cut(s)	1331
PceI	AGGCCT	1 cut(s)	838
PcsI	WCGNNNNNNNCGW	4 cut(s)	465, 474, 576, 710
PdiI	GCCGGC	3 cut(s)	52, 521, 577
PfeI	GAWTC	8 cut(s)	159, 192, 237, 313, 378, 628, 668, 1651
PflFI	GACNNNGTC	2 cut(s)	224, 352
PflMI	CCANNNNNTGG	1 cut(s)	540
PinAI	ACCGGT	1 cut(s)	1763
PkrI	GCNGC	8 cut(s)	56, 182, 374, 859, 871, 1274, 1581, 1598
PleI	GAGTC	8 cut(s)	290, 337, 575, 795, 974, 1682, 1795, 1801
PluTI	GGCGCC	1 cut(s)	1172
PpsI	GAGTC	8 cut(s)	290, 337, 575, 795, 974, 1682, 1795, 1801
PpuMI	RGGWCCY	1 cut(s)	510
Psp1406I	AACGTT	1 cut(s)	1235
Psp5II	RGGWCCY	1 cut(s)	510
Psp6I	CCWGG	1 cut(s)	1322
PspFI	CCCAGC	1 cut(s)	1704
PspGI	CCWGG	1 cut(s)	1322
PspN4I	GGNNCC	9 cut(s)	27, 249, 511, 512, 680, 1009, 1170, 1267, 1321
PspPI	GGNCC	7 cut(s)	61, 247, 280, 510, 636, 1266, 2081
PspPPI	RGGWCCY	1 cut(s)	510
PsrI	GAACNNNNNNTAC	2 cut(s)	707, 739
PstI	CTGCAG	2 cut(s)	1309, 1380
PstNI	CAGNNNCTG	1 cut(s)	1691
PsuI	RGATCY	4 cut(s)	25, 1354, 1584, 1912
PsyI	GACNNNGTC	2 cut(s)	224, 352
RseI	CAYNNNNRTG	1 cut(s)	551
SaqAI	TTAA	6 cut(s)	957, 1029, 1232, 1365, 1929, 1962
SatI	GCNGC	8 cut(s)	55, 181, 373, 858, 870, 1273, 1580, 1597
Sau3AI	GATC	6 cut(s)	25, 456, 1354, 1414, 1584, 1912
Sau96I	GGNCC	7 cut(s)	61, 247, 280, 510, 636, 1266, 2081
SbfI	CCTGCAGG	1 cut(s)	1309
SchI	GAGTC	8 cut(s)	290, 337, 575, 796, 974, 1682, 1796, 1801
ScrFI	CCNGG	4 cut(s)	212, 538, 721, 1324
SdaI	CCTGCAGG	1 cut(s)	1309
SduI	GDGCHC	3 cut(s)	120, 548, 944
SfaNI	GCATC	2 cut(s)	1449, 1597
SfcI	CTRYAG	3 cut(s)	1070, 1305, 1376
SfoI	GGCGCC	1 cut(s)	1170
SgrAI	CRCCGGYG	2 cut(s)	50, 575
SinI	GGWCC	6 cut(s)	61, 247, 280, 510, 1266, 2081
SmiMI	CAYNNNNRTG	1 cut(s)	551
SmlI	CTYRAG	2 cut(s)	102, 1697
SmoI	CTYRAG	2 cut(s)	102, 1697
SphI	GCATGC	1 cut(s)	1331
Sse8387I	CCTGCAGG	1 cut(s)	1309
SseBI	AGGCCT	1 cut(s)	838
SspDI	GGCGCC	1 cut(s)	1168
SspMI	CTAG	3 cut(s)	987, 1425, 1715
StuI	AGGCCT	1 cut(s)	838
StyD4I	CCNGG	4 cut(s)	210, 536, 719, 1322
StyI	CCWWGG	4 cut(s)	283, 462, 1058, 1124
TaaI	ACNGT	1 cut(s)	454
TaiI	ACGT	5 cut(s)	135, 471, 551, 1238, 1999
TaqI	TCGA	4 cut(s)	135, 584, 785, 1413
TauI	GCSGC	4 cut(s)	57, 183, 375, 872
TfiI	GAWTC	8 cut(s)	159, 192, 237, 313, 378, 628, 668, 1651
Tru1I	TTAA	6 cut(s)	957, 1029, 1232, 1365, 1929, 1962
Tru9I	TTAA	6 cut(s)	957, 1029, 1232, 1365, 1929, 1962
TscAI	CASTG	2 cut(s)	941, 1609
TseFI	GTSAC	1 cut(s)	1075
TseI	GCWGC	4 cut(s)	857, 1272, 1579, 1596
Tsp45I	GTSAC	1 cut(s)	1075
TspDTI	ATGAA	6 cut(s)	17, 759, 991, 1771, 1959, 2022
TspGWI	ACGGA	4 cut(s)	142, 373, 1201, 1666
TspRI	CASTG	2 cut(s)	941, 1609
Tth111I	GACNNNGTC	2 cut(s)	224, 352
Van91I	CCANNNNNTGG	1 cut(s)	540
VpaK11BI	GGWCC	6 cut(s)	61, 247, 280, 510, 1266, 2081
XapI	RAATTY	6 cut(s)	781, 1147, 1420, 1428, 1739, 1958
XbaI	TCTAGA	1 cut(s)	1424
XceI	RCATGY	1 cut(s)	1331
XcmI	CCANNNNNNNNNTGG	3 cut(s)	241, 689, 1162
XmiI	GTMKAC	2 cut(s)	1288, 2056
XspI	CTAG	3 cut(s)	987, 1425, 1715
ZraI	GACGTC	1 cut(s)	469

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.