Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0006483.1

Orthogroup ID

OG0002309

Physical Location & Seq

Genomic Coordinates Reverse (-)

126999 .. 136003

Gene Structure 9005 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0006483.1_g000023.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2451 bp

atggctgatagtcgtctattggggggcaatagaagtctattggggtgcaatagaagtctattggggagcaatagatgtttattgggggcaaaaaaaatcatttccggtgagattttcagcaaaatccggtgggcggcggtcggtgaccggattcctgcgaaagttccggcgaccggtgaaagttggcctgattctgacggccggcgaccaggctccagcgctctctatctaagtttcaaagtggtgagggtaaaatggaattttttgctggttggctcatgtgtgctgtctaagcatttactgagagctaagaagaaaaagggggttggagatttggagatgattacgtttatggattcgaaagaaaaattgaaggagggagagaagtgcttggatcctcagctatggcatgcctgtgctggagggatggttcaaatgccatcggtgaatgccaaggtgttttacttccctcagggccacgccgaacacgcttgtggccctgtcgatttcaggaactgcccgaggattccgccttacatactctgcagggtctcggccatcaagttcatggctgatcctgagactgacgaggtttatgccaagattaggctggttcctttgagctccagtgaggctggttatgaggataatggaattggggggattaatggggctgattcgcaagataagccggcctcatttgcaaagacgctgactcagtcggatgctaacaatggtggggggttttctgtgccgagatactgtgctgagaccatctttcccagattggactactcggctgatcctcctgtgcagacgattcttgctaaggatgttcatggcgagacttggaagtttaggcacatatatagggggacgccgaggcggcatctattgaccacagggtggagtacttttgtgaaccacaagaagcttgttgctggggactcgattgtgtttttgagggcggagaacggtgatctctgtgttggaattcggcgagccaagaggggaattgggggtggcccggagtcatcttctgggtggaatcccgcgggtgggaattgtgccatgccatatggagggttctcttcctatttgagggaggatgaggggaaactgatgagaaatggcaatggtaatggctcgaattcgaatggaagtctaatggggaagggcaaagttggtcctgaatcagttttggaagctgcaacacttgcttcaaatggacaaccctttgaggttgtttactaccctcgagcaagtactccagagttttgtgtgaaagcctcgttggtgaaggcagcactgcagatccgttggtgccccggaatgagatttaagatggcctttgaaaccgaagattcttccaggataagttggttcatgggaaccatatcctctgttcatgtttctgagcctatgcgctggcctgaatcaccttggcggcttctccaggttagctgggatgaacctgatttgcttcagaatgtcaagcgcgttagcccgtggctggtagaattggtgtcaaacatgcccgccatccacctgacacccttctcaccaccaaggaagaagatgagactgccacaacaccccgatttcccatttgagggacaacttccaatgccgacattttccggcaatcaccacctccttggaaccagcagccccttcggttgtctgcccgacaaaactcctgctggcatgcagggagccaggcatgctcattacggtctatccttatcagatatccacctcaataaactgcaatcaggtctatttccggctggtttcccgccacttgatcatgttgctactcccaccaaattctccaataacacaatgattcaaaggcctaccatgagcgagaatgtgtcttgcttgttaactatggcacattctccacagtcttcaaagaaacccgatgatgtaaagccaccgcagctcatgctcttcggtcaaacaatacttactgagcagcaaatctctatgagctcctctggcgatactgtctcaccagtgcttactggaaatagttcgtcagatggaagtggagataaaatggcaaaccattctgataattctggatctgcacttcaccaacaaagcgtacaagagcgatcatccggtgaaggtttccattggtataaggacactcggcatgaagctgaaccaaatttggaaactggtcactgtaaagtctttatggaatctgaagatgtaggccgcactcttgacttttcacagttcaagtcttatgatgaattgtatacgaaactggcagacatgtttggcatagaaaattccgagacactgaaccatgtgctctatcgagatgctactggcgcagtcaaacacattggagacgaaccattcagtgactttgtgaaaacggcaaggagattgacgattctaatggattcaggcagcaacaatgtaggaatgtaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Auxin_resp B3

Protein Analysis

816

Amino Acids

89.48

Weight (kDa)

8.53

Isoelectric Point (pI)

50.55

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002309)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G28350 AT2G28350
fragaria_vesca	FvH4_3g32000 FvH4_3g32000 FvH4_6g15960 FvH4_6g15960 FvH4_6g15960
malus_domestica	MD03G1119500.v1.1 MD03G1119700.v1.1 MD04G1096900.v1.1
prunus_persica	Prupe.6G102800_v2.0.a1 Prupe.6G102800_v2.0.a1 Prupe.6G102800_v2.0.a1 Prupe.6G236200_v2.0.a1 Prupe.6G236200_v2.0.a1 Prupe.6G236200_v2.0.a1
pyrus_communis	pycom04g09200 pycom11g11370 pycom12g11700
rosa_chinensis	RchiOBHm_Chr3g0469661 RchiOBHm_Chr5g0058761
rosa_laevigata	RLG00000024330 RLG00000035245
rosa_multiflora	Rmu_sc0000367.1_g000238 Rmu_sc0006483.1_g000023 Rmu_sc0030116.1_g000001
rosa_roxburghii	Rroxscaffold_1G00021650 Rroxscaffold_6G00411580
rosa_rugosa	Rorug03G0103100 Rorug03G0103200 Rorug03G0103300 Rorug05G0317900
rosa_samantha	Rh3AG152700 Rh3BG176500 Rh3CG167500 Rh3DG199100 Rh5AG383600 Rh5BG395500 Rh5CG419200 Rh5DG410900
rosa_wichuraiana	Rw3G014400 Rw5G036140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1323
AccB7I	CCANNNNNTGG	1 cut(s)	906
AccI	GTMKAC	1 cut(s)	2273
AccII	CGCG	2 cut(s)	1055, 1500
AclWI	GGATC	6 cut(s)	389, 402, 569, 797, 1309, 2098
AcoI	YGGCCR	2 cut(s)	199, 555
AcsI	RAATTY	6 cut(s)	259, 993, 1150, 1829, 2179, 2305
AcuI	CTGAAG	2 cut(s)	1469, 2238
AcyI	GRCGYC	1 cut(s)	878
AdeI	CACNNNGTG	1 cut(s)	906
AfaI	GTAC	3 cut(s)	913, 1267, 2115
AfeI	AGCGCT	1 cut(s)	220
AflIII	ACRYGT	1 cut(s)	2289
AgeI	ACCGGT	1 cut(s)	173
AgsI	TTSAA	8 cut(s)	238, 373, 434, 1224, 1355, 1853, 1917, 2254
AjnI	CCWGG	4 cut(s)	208, 1370, 1455, 1718
AjuI	GAANNNNNNNTTGG	2 cut(s)	1277, 1309
AleI	CACNNNNGTG	1 cut(s)	492
AloI	GAACNNNNNNTCC	2 cut(s)	414, 446
AluBI	AGCT	9 cut(s)	308, 403, 624, 934, 1208, 1464, 1948, 1998, 2171
AluI	AGCT	9 cut(s)	308, 403, 624, 934, 1208, 1464, 1948, 1998, 2171
Alw21I	GWGCWC	3 cut(s)	626, 2000, 2331
Alw26I	GTCTC	8 cut(s)	556, 575, 764, 839, 1576, 2020, 2306, 2361
AlwI	GGATC	6 cut(s)	389, 402, 569, 797, 1309, 2098
AlwNI	CAGNNNCTG	1 cut(s)	516
Ama87I	CYCGRG	2 cut(s)	520, 1257
Aor51HI	AGCGCT	1 cut(s)	220
ApeKI	GCWGC	6 cut(s)	1208, 1304, 1668, 1945, 1981, 2430
ApoI	RAATTY	6 cut(s)	259, 993, 1150, 1829, 2179, 2305
AseI	ATTAAT	1 cut(s)	666
AsiGI	ACCGGT	1 cut(s)	173
Asp700I	GAANNNNTTC	1 cut(s)	2038
AspLEI	GCGC	4 cut(s)	221, 1428, 1500, 2351
AspS9I	GGNCC	4 cut(s)	475, 497, 1025, 1187
AsuC2I	CCSGG	2 cut(s)	1028, 1329
AsuII	TTCGAA	2 cut(s)	359, 1154
AvaI	CYCGRG	2 cut(s)	520, 1257
AvaII	GGWCC	1 cut(s)	1187
AxyI	CCTNAGG	1 cut(s)	471
BaeGI	GKGCMC	1 cut(s)	1328
BamHI	GGATCC	1 cut(s)	394
BanI	GGYRCC	1 cut(s)	1323
BanII	GRGCYC	2 cut(s)	626, 2000
BbsI	GAAGAC	1 cut(s)	1905
Bbv12I	GWGCWC	3 cut(s)	626, 2000, 2331
BbvCI	CCTCAGC	1 cut(s)	399
BbvI	GCAGC	6 cut(s)	1195, 1316, 1680, 1957, 1993, 2442
BccI	CCATC	7 cut(s)	421, 448, 566, 782, 1339, 1550, 2042
BceAI	ACGGC	2 cut(s)	214, 2412
BcgI	CGANNNNNNTGC	4 cut(s)	578, 612, 1657, 1691
BciT130I	CCWGG	4 cut(s)	210, 1372, 1457, 1720
BclI	TGATCA	1 cut(s)	1807
BcnI	CCSGG	2 cut(s)	1028, 1329
BcoDI	GTCTC	8 cut(s)	556, 575, 764, 839, 1576, 2020, 2306, 2361
BfmI	CTRYAG	2 cut(s)	544, 1310
BfoI	RGCGCY	1 cut(s)	222
BglI	GCCNNNNNGGC	1 cut(s)	886
BmcAI	AGTACT	2 cut(s)	913, 1267
Bme1390I	CCNGG	6 cut(s)	210, 1028, 1329, 1372, 1457, 1720
Bme18I	GGWCC	1 cut(s)	1187
BmeT110I	CYCGRG	2 cut(s)	520, 1257
BmgT120I	GGNCC	4 cut(s)	475, 497, 1025, 1187
BmiI	GGNNCC	7 cut(s)	214, 396, 615, 1325, 1393, 1663, 1717
BmrFI	CCNGG	6 cut(s)	210, 1028, 1329, 1372, 1457, 1720
BmsI	GCATC	3 cut(s)	715, 898, 2329
BpiI	GAAGAC	1 cut(s)	1905
BpmI	CTGGAG	5 cut(s)	199, 441, 610, 1254, 1439
Bpu10I	CCTNAGC	2 cut(s)	399, 828
Bpu14I	TTCGAA	2 cut(s)	359, 1154
BpuMI	CCSGG	2 cut(s)	1028, 1329
BsaHI	GRCGYC	1 cut(s)	878
BsaI	GGTCTC	2 cut(s)	556, 764
BsaJI	CCNNGG	9 cut(s)	453, 521, 881, 1053, 1327, 1442, 1508, 1568, 1657
BsaWI	WCCGGW	5 cut(s)	104, 126, 147, 173, 2129
BsaXI	ACNNNNNCTCC	2 cut(s)	414, 444
Bse118I	RCCGGY	3 cut(s)	173, 201, 691
Bse1I	ACTGG	6 cut(s)	627, 2021, 2035, 2194, 2286, 2350
Bse21I	CCTNAGG	1 cut(s)	471
Bse3DI	GCAATG	1 cut(s)	1141
BseBI	CCWGG	4 cut(s)	210, 1372, 1457, 1720
BseDI	CCNNGG	9 cut(s)	453, 521, 881, 1053, 1327, 1442, 1508, 1568, 1657
BseGI	GGATG	7 cut(s)	432, 730, 838, 1114, 1474, 1542, 2126
BseMI	GCAATG	1 cut(s)	1141
BseMII	CTCAG	8 cut(s)	293, 413, 485, 570, 731, 759, 1407, 1968
BseNI	ACTGG	6 cut(s)	627, 2021, 2035, 2194, 2286, 2350
BseRI	GAGGAG	1 cut(s)	1990
BseSI	GKGCMC	1 cut(s)	1328
BseX3I	CGGCCG	1 cut(s)	199
BseXI	GCAGC	6 cut(s)	1195, 1316, 1680, 1957, 1993, 2442
BseYI	CCCAGC	2 cut(s)	941, 1464
BsgI	GTGCAG	2 cut(s)	833, 2079
Bsh1236I	CGCG	2 cut(s)	1055, 1500
Bsh1285I	CGRYCG	3 cut(s)	141, 174, 202
BshNI	GGYRCC	1 cut(s)	1323
BshTI	ACCGGT	1 cut(s)	173
BsiEI	CGRYCG	3 cut(s)	141, 174, 202
BsiHKAI	GWGCWC	3 cut(s)	626, 2000, 2331
BsiHKCI	CYCGRG	2 cut(s)	520, 1257
BslFI	GGGAC	3 cut(s)	889, 959, 1629
BsmAI	GTCTC	8 cut(s)	556, 575, 764, 839, 1576, 2020, 2306, 2361
BsmBI	CGTCTC	1 cut(s)	2361
BsmFI	GGGAC	3 cut(s)	889, 959, 1629
BsmI	GAATGC	1 cut(s)	454
Bso31I	GGTCTC	2 cut(s)	556, 764
BsoBI	CYCGRG	2 cut(s)	520, 1257
Bsp119I	TTCGAA	2 cut(s)	359, 1154
Bsp1286I	GDGCHC	4 cut(s)	626, 1328, 2000, 2331
Bsp143I	GATC	8 cut(s)	394, 574, 802, 979, 1314, 1807, 2090, 2123
BspCNI	CTCAG	8 cut(s)	294, 412, 484, 571, 730, 760, 1408, 1969
BspFNI	CGCG	2 cut(s)	1055, 1500
BspLI	GGNNCC	7 cut(s)	214, 396, 615, 1325, 1393, 1663, 1717
BspMAI	CTGCAG	2 cut(s)	548, 1314
BspPI	GGATC	6 cut(s)	389, 402, 569, 797, 1309, 2098
BspQI	GCTCTTC	1 cut(s)	1961
BspT104I	TTCGAA	2 cut(s)	359, 1154
BspT107I	GGYRCC	1 cut(s)	1323
BspTNI	GGTCTC	2 cut(s)	556, 764
BsrDI	GCAATG	1 cut(s)	1141
BsrFI	RCCGGY	3 cut(s)	173, 201, 691
BsrI	ACTGG	6 cut(s)	627, 2021, 2035, 2194, 2286, 2350
BssAI	RCCGGY	3 cut(s)	173, 201, 691
BssECI	CCNNGG	9 cut(s)	453, 521, 881, 1053, 1327, 1442, 1508, 1568, 1657
BssMI	GATC	8 cut(s)	394, 574, 802, 979, 1314, 1807, 2090, 2123
BssNAI	GTATAC	1 cut(s)	2274
BssNI	GRCGYC	1 cut(s)	878
BssT1I	CCWWGG	4 cut(s)	453, 1442, 1568, 1657
Bst1107I	GTATAC	1 cut(s)	2274
Bst2UI	CCWGG	4 cut(s)	210, 1372, 1457, 1720
Bst4CI	ACNGT	7 cut(s)	764, 977, 1736, 1911, 2014, 2198, 2250
Bst6I	CTCTTC	2 cut(s)	1096, 1961
BstACI	GRCGYC	1 cut(s)	878
BstAPI	GCANNNNNTGC	2 cut(s)	1217, 1951
BstBI	TTCGAA	2 cut(s)	359, 1154
BstC8I	GCNNGC	9 cut(s)	203, 411, 693, 1002, 1430, 1539, 1705, 1709, 1725
BstDSI	CCRYGG	2 cut(s)	1053, 1508
BstEII	GGTNACC	1 cut(s)	143
BstENI	CCTNNNNNAGG	1 cut(s)	1099
BstF5I	GGATG	7 cut(s)	432, 730, 838, 1114, 1474, 1542, 2126
BstFNI	CGCG	2 cut(s)	1055, 1500
BstH2I	RGCGCY	1 cut(s)	222
BstHHI	GCGC	4 cut(s)	221, 1428, 1500, 2351
BstKTI	GATC	8 cut(s)	397, 577, 805, 982, 1317, 1810, 2093, 2126
BstMAI	GTCTC	8 cut(s)	556, 575, 764, 839, 1576, 2020, 2306, 2361
BstMBI	GATC	8 cut(s)	394, 574, 802, 979, 1314, 1807, 2090, 2123
BstMCI	CGRYCG	3 cut(s)	141, 174, 202
BstNI	CCWGG	4 cut(s)	210, 1372, 1457, 1720
BstNSI	RCATGY	5 cut(s)	413, 1537, 1711, 1727, 2293
BstPI	GGTNACC	1 cut(s)	143
BstSCI	CCNGG	6 cut(s)	208, 1026, 1327, 1370, 1455, 1718
BstSFI	CTRYAG	2 cut(s)	544, 1310
BstSLI	GKGCMC	1 cut(s)	1328
BstUI	CGCG	2 cut(s)	1055, 1500
BstV1I	GCAGC	6 cut(s)	1195, 1316, 1680, 1957, 1993, 2442
BstV2I	GAAGAC	1 cut(s)	1905
BstX2I	RGATCY	3 cut(s)	394, 1314, 2090
BstXI	CCANNNNNNTGG	1 cut(s)	1658
BstYI	RGATCY	3 cut(s)	394, 1314, 2090
BstZ17I	GTATAC	1 cut(s)	2274
BstZI	CGGCCG	1 cut(s)	199
Bsu36I	CCTNAGG	1 cut(s)	471
BtgI	CCRYGG	2 cut(s)	1053, 1508
BtsCI	GGATG	7 cut(s)	432, 730, 838, 1114, 1474, 1542, 2126
BtsI	GCAGTG	1 cut(s)	1307
BtsIMutI	CAGTG	6 cut(s)	634, 1307, 2028, 2194, 2315, 2386
Cac8I	GCNNGC	9 cut(s)	203, 411, 693, 1002, 1430, 1539, 1705, 1709, 1725
CaiI	CAGNNNCTG	1 cut(s)	516
CfoI	GCGC	4 cut(s)	221, 1428, 1500, 2351
Cfr10I	RCCGGY	3 cut(s)	173, 201, 691
Cfr13I	GGNCC	4 cut(s)	475, 497, 1025, 1187
Cfr42I	CCGCGG	1 cut(s)	1056
CseI	GACGC	2 cut(s)	718, 886
Csp6I	GTAC	3 cut(s)	912, 1266, 2114
CspAI	ACCGGT	1 cut(s)	173
CviQI	GTAC	3 cut(s)	912, 1266, 2114
DpnI	GATC	8 cut(s)	396, 576, 804, 981, 1316, 1809, 2092, 2125
DpnII	GATC	8 cut(s)	394, 574, 802, 979, 1314, 1807, 2090, 2123
DraIII	CACNNNGTG	1 cut(s)	906
EaeI	YGGCCR	2 cut(s)	199, 555
EagI	CGGCCG	1 cut(s)	199
Eam1104I	CTCTTC	2 cut(s)	1096, 1961
EarI	CTCTTC	2 cut(s)	1096, 1961
EciI	GGCGGA	2 cut(s)	519, 983
Ecl136II	GAGCTC	2 cut(s)	624, 1998
EclXI	CGGCCG	1 cut(s)	199
Eco130I	CCWWGG	4 cut(s)	453, 1442, 1568, 1657
Eco147I	AGGCCT	1 cut(s)	1858
Eco24I	GRGCYC	2 cut(s)	626, 2000
Eco31I	GGTCTC	2 cut(s)	556, 764
Eco32I	GATATC	1 cut(s)	1753
Eco47I	GGWCC	1 cut(s)	1187
Eco47III	AGCGCT	1 cut(s)	220
Eco52I	CGGCCG	1 cut(s)	199
Eco53kI	GAGCTC	2 cut(s)	624, 1998
Eco57I	CTGAAG	2 cut(s)	1469, 2238
Eco81I	CCTNAGG	1 cut(s)	471
Eco88I	CYCGRG	2 cut(s)	520, 1257
Eco91I	GGTNACC	1 cut(s)	143
EcoICRI	GAGCTC	2 cut(s)	624, 1998
EcoNI	CCTNNNNNAGG	1 cut(s)	1099
EcoO65I	GGTNACC	1 cut(s)	143
EcoRI	GAATTC	2 cut(s)	993, 1150
EcoRII	CCWGG	4 cut(s)	208, 1370, 1455, 1718
EcoRV	GATATC	1 cut(s)	1753
EcoT14I	CCWWGG	4 cut(s)	453, 1442, 1568, 1657
EcoT38I	GRGCYC	2 cut(s)	626, 2000
ErhI	CCWWGG	4 cut(s)	453, 1442, 1568, 1657
Esp3I	CGTCTC	1 cut(s)	2361
FalI	AAGNNNNNCTT	2 cut(s)	1334, 1366
FaqI	GGGAC	3 cut(s)	889, 959, 1629
FauI	CCCGC	4 cut(s)	1048, 1060, 1546, 1806
FauNDI	CATATG	1 cut(s)	1078
FbaI	TGATCA	1 cut(s)	1807
FblI	GTMKAC	1 cut(s)	2273
FokI	GGATG	7 cut(s)	439, 737, 845, 1121, 1481, 1529, 2113
FriOI	GRGCYC	2 cut(s)	626, 2000
GlaI	GCGC	4 cut(s)	220, 1427, 1499, 2350
GsaI	CCCAGC	2 cut(s)	945, 1468
GsuI	CTGGAG	5 cut(s)	199, 441, 610, 1254, 1439
HaeII	RGCGCY	1 cut(s)	222
HgaI	GACGC	2 cut(s)	718, 886
HhaI	GCGC	4 cut(s)	221, 1428, 1500, 2351
Hin1I	GRCGYC	1 cut(s)	878
Hin6I	GCGC	4 cut(s)	219, 1426, 1498, 2349
HinP1I	GCGC	4 cut(s)	219, 1426, 1498, 2349
HincII	GTYRAC	1 cut(s)	1890
HindII	GTYRAC	1 cut(s)	1890
HindIII	AAGCTT	1 cut(s)	932
HpaI	GTTAAC	1 cut(s)	1890
Hpy166II	GTNNAC	4 cut(s)	922, 1249, 1890, 2274
Hpy188I	TCNGA	9 cut(s)	196, 724, 1417, 1488, 1750, 2047, 2080, 2218, 2311
Hpy188III	TCNNGA	7 cut(s)	511, 578, 1190, 1271, 2088, 2237, 2336
Hpy8I	GTNNAC	4 cut(s)	922, 1249, 1890, 2274
HpyAV	CCTTC	6 cut(s)	367, 1168, 1294, 1567, 1684, 2129
HpyCH4III	ACNGT	7 cut(s)	764, 977, 1736, 1911, 2014, 2198, 2250
HpyCH4IV	ACGT	1 cut(s)	347
HpyCH4V	TGCA	9 cut(s)	48, 546, 704, 814, 1211, 1312, 1711, 1771, 2096
HpySE526I	ACGT	1 cut(s)	347
Hsp92I	GRCGYC	1 cut(s)	878
HspAI	GCGC	4 cut(s)	219, 1426, 1498, 2349
KroI	GCCGGC	2 cut(s)	201, 691
KroNI	GCCGGC	2 cut(s)	203, 693
Ksp22I	TGATCA	1 cut(s)	1807
KspAI	GTTAAC	1 cut(s)	1890
KspI	CCGCGG	1 cut(s)	1056
Kzo9I	GATC	8 cut(s)	394, 574, 802, 979, 1314, 1807, 2090, 2123
LguI	GCTCTTC	1 cut(s)	1961
LmnI	GCTCC	5 cut(s)	66, 218, 629, 1715, 2003
Lsp1109I	GCAGC	6 cut(s)	1195, 1316, 1680, 1957, 1993, 2442
LweI	GCATC	3 cut(s)	715, 898, 2329
MaeII	ACGT	1 cut(s)	347
MaeIII	GTNAC	3 cut(s)	143, 2192, 2381
MalI	GATC	8 cut(s)	396, 576, 804, 981, 1316, 1809, 2092, 2125
MboI	GATC	8 cut(s)	394, 574, 802, 979, 1314, 1807, 2090, 2123
MflI	RGATCY	3 cut(s)	394, 1314, 2090
MhlI	GDGCHC	4 cut(s)	626, 1328, 2000, 2331
MlyI	GAGTC	3 cut(s)	709, 941, 1040
MmeI	TCCRAC	3 cut(s)	307, 702, 970
MroNI	GCCGGC	2 cut(s)	201, 691
MroXI	GAANNNNTTC	1 cut(s)	2038
MseI	TTAA	3 cut(s)	666, 1341, 1889
MslI	CAYNNNNRTG	2 cut(s)	414, 492
MspA1I	CMGCKG	1 cut(s)	1055
MspR9I	CCNGG	6 cut(s)	210, 1028, 1329, 1372, 1457, 1720
Mva1269I	GAATGC	1 cut(s)	454
MvaI	CCWGG	4 cut(s)	210, 1372, 1457, 1720
MvnI	CGCG	2 cut(s)	1055, 1500
NaeI	GCCGGC	2 cut(s)	203, 693
NciI	CCSGG	2 cut(s)	1028, 1329
NdeI	CATATG	1 cut(s)	1078
NdeII	GATC	8 cut(s)	394, 574, 802, 979, 1314, 1807, 2090, 2123
NgoMIV	GCCGGC	2 cut(s)	201, 691
NlaIV	GGNNCC	7 cut(s)	214, 396, 615, 1325, 1393, 1663, 1717
NmeAIII	GCCGAG	5 cut(s)	533, 776, 780, 906, 2140
NmuCI	GTSAC	3 cut(s)	143, 2192, 2381
NspI	RCATGY	5 cut(s)	413, 1537, 1711, 1727, 2293
NspV	TTCGAA	2 cut(s)	359, 1154
OliI	CACNNNNGTG	1 cut(s)	492
PaeI	GCATGC	3 cut(s)	413, 1711, 1727
PaeR7I	CTCGAG	1 cut(s)	1257
PceI	AGGCCT	1 cut(s)	1858
PciI	ACATGT	1 cut(s)	2289
PciSI	GCTCTTC	1 cut(s)	1961
PctI	GAATGC	1 cut(s)	454
PdiI	GCCGGC	2 cut(s)	203, 693
PdmI	GAANNNNTTC	1 cut(s)	2038
PflFI	GACNNNGTC	1 cut(s)	718
PflMI	CCANNNNNTGG	1 cut(s)	906
PfoI	TCCNGGA	1 cut(s)	1370
PinAI	ACCGGT	1 cut(s)	173
PleI	GAGTC	3 cut(s)	709, 941, 1039
PpsI	GAGTC	3 cut(s)	709, 941, 1039
PscI	ACATGT	1 cut(s)	2289
PshBI	ATTAAT	1 cut(s)	666
Psp124BI	GAGCTC	2 cut(s)	626, 2000
Psp6I	CCWGG	4 cut(s)	208, 1370, 1455, 1718
PspEI	GGTNACC	1 cut(s)	143
PspFI	CCCAGC	2 cut(s)	941, 1464
PspGI	CCWGG	4 cut(s)	208, 1370, 1455, 1718
PspN4I	GGNNCC	7 cut(s)	214, 396, 615, 1325, 1393, 1663, 1717
PspPI	GGNCC	4 cut(s)	475, 497, 1025, 1187
PspXI	VCTCGAGB	1 cut(s)	1257
PstI	CTGCAG	2 cut(s)	548, 1314
PstNI	CAGNNNCTG	1 cut(s)	516
PsuI	RGATCY	3 cut(s)	394, 1314, 2090
PsyI	GACNNNGTC	1 cut(s)	718
RsaI	GTAC	3 cut(s)	913, 1267, 2115
RsaNI	GTAC	3 cut(s)	912, 1266, 2114
RseI	CAYNNNNRTG	2 cut(s)	414, 492
SacI	GAGCTC	2 cut(s)	626, 2000
SacII	CCGCGG	1 cut(s)	1056
SapI	GCTCTTC	1 cut(s)	1961
SaqAI	TTAA	3 cut(s)	666, 1341, 1889
Sau3AI	GATC	8 cut(s)	394, 574, 802, 979, 1314, 1807, 2090, 2123
Sau96I	GGNCC	4 cut(s)	475, 497, 1025, 1187
ScaI	AGTACT	2 cut(s)	913, 1267
SchI	GAGTC	3 cut(s)	709, 941, 1040
ScrFI	CCNGG	6 cut(s)	210, 1028, 1329, 1372, 1457, 1720
SduI	GDGCHC	4 cut(s)	626, 1328, 2000, 2331
SfaNI	GCATC	3 cut(s)	715, 898, 2329
SfcI	CTRYAG	2 cut(s)	544, 1310
Sfr274I	CTCGAG	1 cut(s)	1257
Sfr303I	CCGCGG	1 cut(s)	1056
SfuI	TTCGAA	2 cut(s)	359, 1154
SgrBI	CCGCGG	1 cut(s)	1056
SinI	GGWCC	1 cut(s)	1187
SlaI	CTCGAG	1 cut(s)	1257
SmiMI	CAYNNNNRTG	2 cut(s)	414, 492
SmlI	CTYRAG	1 cut(s)	1257
SmoI	CTYRAG	1 cut(s)	1257
SphI	GCATGC	3 cut(s)	413, 1711, 1727
SseBI	AGGCCT	1 cut(s)	1858
SstI	GAGCTC	2 cut(s)	626, 2000
StuI	AGGCCT	1 cut(s)	1858
StyD4I	CCNGG	6 cut(s)	208, 1026, 1327, 1370, 1455, 1718
StyI	CCWWGG	4 cut(s)	453, 1442, 1568, 1657
TaaI	ACNGT	7 cut(s)	764, 977, 1736, 1911, 2014, 2198, 2250
TaiI	ACGT	1 cut(s)	350
TaqI	TCGA	7 cut(s)	359, 504, 950, 1148, 1154, 1258, 2335
TaqII	GACCGA	1 cut(s)	1949
TatI	WGTACW	2 cut(s)	911, 1265
TauI	GCSGC	4 cut(s)	137, 889, 1450, 2232
Tru1I	TTAA	3 cut(s)	666, 1341, 1889
Tru9I	TTAA	3 cut(s)	666, 1341, 1889
TscAI	CASTG	6 cut(s)	634, 1314, 2028, 2201, 2322, 2386
TseFI	GTSAC	3 cut(s)	143, 2192, 2381
TseI	GCWGC	6 cut(s)	1208, 1304, 1668, 1945, 1981, 2430
Tsp45I	GTSAC	3 cut(s)	143, 2192, 2381
TspDTI	ATGAA	7 cut(s)	556, 827, 1375, 1397, 1485, 2181, 2280
TspGWI	ACGGA	1 cut(s)	1307
TspRI	CASTG	6 cut(s)	634, 1314, 2028, 2201, 2322, 2386
Tth111I	GACNNNGTC	1 cut(s)	718
Van91I	CCANNNNNTGG	1 cut(s)	906
VpaK11BI	GGWCC	1 cut(s)	1187
VspI	ATTAAT	1 cut(s)	666
XagI	CCTNNNNNAGG	1 cut(s)	1099
XapI	RAATTY	6 cut(s)	259, 993, 1150, 1829, 2179, 2305
XceI	RCATGY	5 cut(s)	413, 1537, 1711, 1727, 2293
XcmI	CCANNNNNNNNNTGG	2 cut(s)	565, 607
XhoI	CTCGAG	1 cut(s)	1257
XmiI	GTMKAC	1 cut(s)	2273
XmnI	GAANNNNTTC	1 cut(s)	2038
ZrmI	AGTACT	2 cut(s)	913, 1267

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.