Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0002309

Physical Location & Seq

Genomic Coordinates Reverse (-)

9952749 .. 9956730

Gene Structure 3982 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g15960.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2118 bp

ATGATTACGTTTATGGATGCGAAAGAGAAATTGAAGGAAGGGGAGAAGTGCTTGGATCCTCAGCTATGGCATGCCTGTGCTGGAGGGATGGTTCAAATGCCATTGGTGAATGCCAAGGTGTTCTACTTCCCTCAGGGCCACGCCGAACACGCTTGCGGCCCTGTCGATTTCAGGAACTACCCGAGGGTTCCGCCTTACATACTCTGCAGGGTCTCGGCTATCAAGTTCATGGCTGATCCTGAAACTGATGAGGTTTATGCAAAGATTAGACTGGTTCCTTTGAGCTCTAGTGAGGCTGGTTATGAGGATAATGGAATTGGGGGAATTAATGGGGCTGATTCGCAAGATAAGCCGGCCTCATTTGCAAAGACGCTGACTCAGTCGGATGCTAACAATGGTGGAGGGTTTTCTGTGCCAAGGTACTGTGCTGAAACTATTTTTCCTAGATTGGACTACTCGGCTGATCCTCCTGTGCAGACAATTCTTGCTAAGGATGTTCATGGCGAGACTTGGAAGTTTAGGCACATTTATAGGGGGACGCCAAGGCGGCATCTATTGACCACAGGGTGGAGTACTTTTGTGAACCACAAGAAGCTTGTTGCTGGGGACTCAATTGTGTTTTTGAGGGCGGAGAACGGTGATCTTTGTGTTGGAATTCGGCGAGCCAAGAGGGGAATTGGGGGTGGACCAGAGTCATCTTCTGGGTGGAATCCGGCAGGTGGGAATTGTGCCATGCCATATGGAGGGTTCTCTTCCTATTTGAGGGAGGATGAGGGGAAAGTGATGAGAAACGGCAACGGTAATGCCTCGAATTCGAATGGGAGTCTAATGGGGAAGGGGAAAGTTGGTCCCGAATCAGTTTTGGAAGCTGCAACACTTGCTTCAAATGGACAGCCTTTTGAGGTTGTTTACTACCCTCGAGCAAGTACTCCAGAGTTTTGTGTGAAAGCCTCGTTGGTGAAGGCAGCATTGCAGATCCGTTGGTGTCCGGGAATGAGATTTAAGATGGCCTTTGAAACCGAAGATTCTTCCAGGATAAGTTGGTTCATGGGAACCATATCCTCTGTTCAGGTATCTGACCCTATGCGCTGGCCTGAATCACCTTGGCGGCTTCTCCAGGTTAGCTGGGATGAACCTGATTTACTTCAGAATGTTAAACGCGTTAGCCCGTGGTTGGTAGAATTGGTGTCAAACATGCCCGCCATCCATCTGACACCCTTCTCACCACCAAGGAAGAAGATGAGACTGCCTCAACACCCCGATTTCCCATTTGAGGGACAACTTCCAATGCCAACATTTTCCGGCAATCACCACCTCCTTGGAACCAGCAGCCCCTTCGGTTGTCTGCCCGACAAAACTCCTGCTGGCATGCAGGGAGCCAGGCATGCTCATTACGGTCTATCATTATCAGATATCCACCTCAATAAACTGCAATCAGGTCTATTTCCGGCTGGTTTCCCGCCACTTGATCATGTTGCTACGCCCACCAAATTCTCCAATAACACAATGATTCAAAGGCCTACCATGAGCGAGAATGTATCTTGCTTGCTAACTATGTCACATTCTCCACAGTCTACAAAGAAATCCGAAGATGTAAAGCCACCGCAGCTCATGCTCTTTGGTAAACCAATACTTACTGAGCAGCAAATCTCTTTGAGCTCCTCTGGCGATACTGTCTCACCAGTAGTTACTGGAAATAGTTCGTCAGATGGTAGTGGAGATAAAATGGCAAACCATTCTGAAAATTCTGGATCTGCACTTCACCAACAAAGCGTACAGGAGAGATCATCTGGTGAAGGTTTCCATTGGTACAAGGACACTCGGCATGAAGCTGAAGCAAATTTGGAAACTGGTCACTGTAAAGTCTTTATGGAGTCTGAAGATGTAGGCCGCACTCTTGACTTTTCACAGTTCAAGTCTTATGATGAATTGTATACAAAACTGGCAGACATGTTTGGCATAGAAAATTCCGAGACACTGAACCATGTGCTCTATCGAGATGCTACTGGTGCAGTCAAACACATTGGAGATGAACCATTCAGTTGCAGTGACTTTGTGAAAACGGCAAGGAGATTGACGATTCTAATGGATTCAGGCAGCAACAATGTAGGAATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Auxin_resp B3

Protein Analysis

706

Amino Acids

77.46

Weight (kDa)

6.55

Isoelectric Point (pI)

52.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B3	PF02362	121 - 222	3.5e-23	B3 DNA binding domain
BRWD_AD	PF25313	295 - 396	6.3e-09	BRWD/PHIP ancillary domain-like domain
ARF_AD	PF06507	313 - 396	2.4e-34	Auxin response factor ancillary domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002309)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G28350 AT2G28350
fragaria_vesca	FvH4_3g32000 FvH4_3g32000 FvH4_6g15960 FvH4_6g15960 FvH4_6g15960
malus_domestica	MD03G1119500.v1.1 MD03G1119700.v1.1 MD04G1096900.v1.1
prunus_persica	Prupe.6G102800_v2.0.a1 Prupe.6G102800_v2.0.a1 Prupe.6G102800_v2.0.a1 Prupe.6G236200_v2.0.a1 Prupe.6G236200_v2.0.a1 Prupe.6G236200_v2.0.a1
pyrus_communis	pycom04g09200 pycom11g11370 pycom12g11700
rosa_chinensis	RchiOBHm_Chr3g0469661 RchiOBHm_Chr5g0058761
rosa_laevigata	RLG00000024330 RLG00000035245
rosa_multiflora	Rmu_sc0000367.1_g000238 Rmu_sc0006483.1_g000023 Rmu_sc0030116.1_g000001
rosa_roxburghii	Rroxscaffold_1G00021650 Rroxscaffold_6G00411580
rosa_rugosa	Rorug03G0103100 Rorug03G0103200 Rorug03G0103300 Rorug05G0317900
rosa_samantha	Rh3AG152700 Rh3BG176500 Rh3CG167500 Rh3DG199100 Rh5AG383600 Rh5BG395500 Rh5CG419200 Rh5DG410900
rosa_wichuraiana	Rw3G014400 Rw5G036140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	707
Acc36I	ACCTGC	1 cut(s)	707
AccB7I	CCANNNNNTGG	1 cut(s)	567
AccI	GTMKAC	2 cut(s)	1574, 1934
AccII	CGCG	1 cut(s)	1161
AciI	CCGC	9 cut(s)	156, 191, 547, 629, 1108, 1200, 1460, 1604, 1891
AclWI	GGATC	6 cut(s)	50, 63, 230, 458, 970, 1759
AcsI	RAATTY	6 cut(s)	654, 811, 1490, 1744, 1840, 1966
AcuI	CTGAAG	3 cut(s)	1130, 1854, 1899
AcyI	GRCGYC	1 cut(s)	539
AdeI	CACNNNGTG	1 cut(s)	567
AfaI	GTAC	5 cut(s)	422, 574, 928, 1776, 1811
AfiI	CCNNNNNNNGG	7 cut(s)	567, 719, 743, 762, 1174, 1273, 1274
AflIII	ACRYGT	2 cut(s)	1159, 1950
AgsI	TTSAA	6 cut(s)	34, 95, 885, 1016, 1514, 1915
AjnI	CCWGG	3 cut(s)	1031, 1116, 1379
AjuI	GAANNNNNNNTTGG	2 cut(s)	938, 970
AloI	GAACNNNNNNTCC	2 cut(s)	75, 107
AluBI	AGCT	8 cut(s)	64, 285, 595, 869, 1125, 1609, 1659, 1832
AluI	AGCT	8 cut(s)	64, 285, 595, 869, 1125, 1609, 1659, 1832
Alw21I	GWGCWC	3 cut(s)	287, 1661, 1992
Alw26I	GTCTC	5 cut(s)	217, 500, 1237, 1681, 1967
AlwI	GGATC	6 cut(s)	50, 63, 230, 458, 970, 1759
Ama87I	CYCGRG	2 cut(s)	181, 918
AoxI	GGCC	7 cut(s)	136, 157, 354, 1008, 1091, 1517, 1888
ApeKI	GCWGC	6 cut(s)	869, 965, 1329, 1606, 1642, 2097
ApoI	RAATTY	6 cut(s)	654, 811, 1490, 1744, 1840, 1966
AseI	ATTAAT	1 cut(s)	327
Asp700I	GAANNNNTTC	1 cut(s)	1699
AspLEI	GCGC	1 cut(s)	1089
AspS9I	GGNCC	4 cut(s)	136, 158, 686, 848
AsuC2I	CCSGG	1 cut(s)	990
AsuHPI	GGTGA	9 cut(s)	118, 650, 970, 1092, 1215, 1301, 1671, 1754, 1805
AsuII	TTCGAA	1 cut(s)	815
AvaI	CYCGRG	2 cut(s)	181, 918
AvaII	GGWCC	2 cut(s)	686, 848
AxyI	CCTNAGG	1 cut(s)	132
BamHI	GGATCC	1 cut(s)	55
BanII	GRGCYC	2 cut(s)	287, 1661
Bbv12I	GWGCWC	3 cut(s)	287, 1661, 1992
BbvCI	CCTCAGC	1 cut(s)	60
BbvI	GCAGC	6 cut(s)	856, 977, 1341, 1618, 1654, 2109
BccI	CCATC	5 cut(s)	82, 1000, 1211, 1215, 1703
BceAI	ACGGC	2 cut(s)	808, 2079
BcgI	CGANNNNNNTGC	2 cut(s)	1318, 1352
BciT130I	CCWGG	3 cut(s)	1033, 1118, 1381
BclI	TGATCA	1 cut(s)	1468
BcnI	CCSGG	1 cut(s)	990
BcoDI	GTCTC	5 cut(s)	217, 500, 1237, 1681, 1967
BfaI	CTAG	2 cut(s)	288, 444
BfmI	CTRYAG	1 cut(s)	205
BfuAI	ACCTGC	1 cut(s)	707
BglI	GCCNNNNNGGC	1 cut(s)	547
BmcAI	AGTACT	2 cut(s)	574, 928
Bme1390I	CCNGG	4 cut(s)	990, 1033, 1118, 1381
Bme18I	GGWCC	2 cut(s)	686, 848
BmeT110I	CYCGRG	2 cut(s)	181, 918
BmgT120I	GGNCC	4 cut(s)	136, 158, 686, 848
BmiI	GGNNCC	7 cut(s)	57, 189, 276, 850, 1054, 1324, 1378
BmrFI	CCNGG	4 cut(s)	990, 1033, 1118, 1381
BmsI	GCATC	4 cut(s)	7, 376, 559, 1990
BoxI	GACNNNNGTC	1 cut(s)	691
BplI	GAGNNNNNCTC	2 cut(s)	1234, 1266
BpmI	CTGGAG	3 cut(s)	102, 915, 1100
Bpu10I	CCTNAGC	2 cut(s)	60, 489
Bpu14I	TTCGAA	1 cut(s)	815
BpuMI	CCSGG	1 cut(s)	990
BsaHI	GRCGYC	1 cut(s)	539
BsaI	GGTCTC	1 cut(s)	217
BsaJI	CCNNGG	8 cut(s)	114, 182, 416, 542, 1103, 1169, 1229, 1318
BsaXI	ACNNNNNCTCC	2 cut(s)	75, 105
Bsc4I	CCNNNNNNNGG	7 cut(s)	567, 719, 743, 762, 1174, 1273, 1274
Bse118I	RCCGGY	1 cut(s)	352
Bse1I	ACTGG	6 cut(s)	276, 1682, 1696, 1855, 1947, 2011
Bse21I	CCTNAGG	1 cut(s)	132
Bse3DI	GCAATG	1 cut(s)	968
BseBI	CCWGG	3 cut(s)	1033, 1118, 1381
BseDI	CCNNGG	8 cut(s)	114, 182, 416, 542, 1103, 1169, 1229, 1318
BseGI	GGATG	7 cut(s)	22, 93, 391, 499, 775, 1135, 1203
BseLI	CCNNNNNNNGG	7 cut(s)	567, 719, 743, 762, 1174, 1273, 1274
BseMI	GCAATG	1 cut(s)	968
BseMII	CTCAG	4 cut(s)	74, 146, 392, 1629
BseNI	ACTGG	6 cut(s)	276, 1682, 1696, 1855, 1947, 2011
BseRI	GAGGAG	1 cut(s)	1651
BseXI	GCAGC	6 cut(s)	856, 977, 1341, 1618, 1654, 2109
BseYI	CCCAGC	2 cut(s)	602, 1125
BsgI	GTGCAG	3 cut(s)	494, 1740, 2031
Bsh1236I	CGCG	1 cut(s)	1161
BshFI	GGCC	7 cut(s)	138, 159, 356, 1010, 1093, 1519, 1890
BsiHKAI	GWGCWC	3 cut(s)	287, 1661, 1992
BsiHKCI	CYCGRG	2 cut(s)	181, 918
BsiSI	CCGG	5 cut(s)	353, 713, 989, 1302, 1448
BslFI	GGGAC	4 cut(s)	550, 620, 834, 1290
BslI	CCNNNNNNNGG	7 cut(s)	567, 719, 743, 762, 1174, 1273, 1274
BsmAI	GTCTC	5 cut(s)	217, 500, 1237, 1681, 1967
BsmFI	GGGAC	4 cut(s)	550, 620, 834, 1290
BsmI	GAATGC	1 cut(s)	115
BsnI	GGCC	7 cut(s)	138, 159, 356, 1010, 1093, 1519, 1890
Bso31I	GGTCTC	1 cut(s)	217
BsoBI	CYCGRG	2 cut(s)	181, 918
Bsp119I	TTCGAA	1 cut(s)	815
Bsp1286I	GDGCHC	3 cut(s)	287, 1661, 1992
Bsp143I	GATC	8 cut(s)	55, 235, 463, 640, 975, 1468, 1751, 1784
BspACI	CCGC	9 cut(s)	156, 191, 547, 629, 1108, 1200, 1460, 1604, 1891
BspANI	GGCC	7 cut(s)	138, 159, 356, 1010, 1093, 1519, 1890
BspCNI	CTCAG	4 cut(s)	73, 145, 391, 1630
BspFNI	CGCG	1 cut(s)	1161
BspLI	GGNNCC	7 cut(s)	57, 189, 276, 850, 1054, 1324, 1378
BspMAI	CTGCAG	1 cut(s)	209
BspMI	ACCTGC	1 cut(s)	707
BspPI	GGATC	6 cut(s)	50, 63, 230, 458, 970, 1759
BspT104I	TTCGAA	1 cut(s)	815
BspTNI	GGTCTC	1 cut(s)	217
BsrDI	GCAATG	1 cut(s)	968
BsrFI	RCCGGY	1 cut(s)	352
BsrI	ACTGG	6 cut(s)	276, 1682, 1696, 1855, 1947, 2011
BssAI	RCCGGY	1 cut(s)	352
BssECI	CCNNGG	8 cut(s)	114, 182, 416, 542, 1103, 1169, 1229, 1318
BssMI	GATC	8 cut(s)	55, 235, 463, 640, 975, 1468, 1751, 1784
BssNAI	GTATAC	1 cut(s)	1935
BssNI	GRCGYC	1 cut(s)	539
BssT1I	CCWWGG	6 cut(s)	114, 416, 542, 1103, 1229, 1318
Bst1107I	GTATAC	1 cut(s)	1935
Bst2UI	CCWGG	3 cut(s)	1033, 1118, 1381
Bst4CI	ACNGT	8 cut(s)	425, 638, 800, 1397, 1572, 1675, 1859, 1911
Bst6I	CTCTTC	1 cut(s)	757
BstACI	GRCGYC	1 cut(s)	539
BstAPI	GCANNNNNTGC	2 cut(s)	878, 1612
BstBI	TTCGAA	1 cut(s)	815
BstDEI	CTNAG	5 cut(s)	60, 132, 378, 489, 1638
BstDSI	CCRYGG	1 cut(s)	1169
BstENI	CCTNNNNNAGG	1 cut(s)	760
BstF5I	GGATG	7 cut(s)	22, 93, 391, 499, 775, 1135, 1203
BstFNI	CGCG	1 cut(s)	1161
BstHHI	GCGC	1 cut(s)	1089
BstKTI	GATC	8 cut(s)	58, 238, 466, 643, 978, 1471, 1754, 1787
BstMAI	GTCTC	5 cut(s)	217, 500, 1237, 1681, 1967
BstMBI	GATC	8 cut(s)	55, 235, 463, 640, 975, 1468, 1751, 1784
BstNI	CCWGG	3 cut(s)	1033, 1118, 1381
BstNSI	RCATGY	5 cut(s)	74, 1198, 1372, 1388, 1954
BstPAI	GACNNNNGTC	1 cut(s)	691
BstSCI	CCNGG	4 cut(s)	988, 1031, 1116, 1379
BstSFI	CTRYAG	1 cut(s)	205
BstUI	CGCG	1 cut(s)	1161
BstV1I	GCAGC	6 cut(s)	856, 977, 1341, 1618, 1654, 2109
BstX2I	RGATCY	3 cut(s)	55, 975, 1751
BstXI	CCANNNNNNTGG	1 cut(s)	1319
BstYI	RGATCY	3 cut(s)	55, 975, 1751
BstZ17I	GTATAC	1 cut(s)	1935
Bsu36I	CCTNAGG	1 cut(s)	132
BsuRI	GGCC	7 cut(s)	138, 159, 356, 1010, 1093, 1519, 1890
BtgI	CCRYGG	1 cut(s)	1169
BtsCI	GGATG	7 cut(s)	22, 93, 391, 499, 775, 1135, 1203
BtsI	GCAGTG	1 cut(s)	2053
BtsIMutI	CAGTG	3 cut(s)	1855, 1976, 2053
BveI	ACCTGC	1 cut(s)	707
CfoI	GCGC	1 cut(s)	1089
Cfr10I	RCCGGY	1 cut(s)	352
Cfr13I	GGNCC	4 cut(s)	136, 158, 686, 848
CseI	GACGC	2 cut(s)	379, 547
Csp6I	GTAC	5 cut(s)	421, 573, 927, 1775, 1810
CviQI	GTAC	5 cut(s)	421, 573, 927, 1775, 1810
DdeI	CTNAG	5 cut(s)	60, 132, 378, 489, 1638
DpnI	GATC	8 cut(s)	57, 237, 465, 642, 977, 1470, 1753, 1786
DpnII	GATC	8 cut(s)	55, 235, 463, 640, 975, 1468, 1751, 1784
DraIII	CACNNNGTG	1 cut(s)	567
Eam1104I	CTCTTC	1 cut(s)	757
EarI	CTCTTC	1 cut(s)	757
EciI	GGCGGA	2 cut(s)	180, 644
Ecl136II	GAGCTC	2 cut(s)	285, 1659
Eco130I	CCWWGG	6 cut(s)	114, 416, 542, 1103, 1229, 1318
Eco147I	AGGCCT	1 cut(s)	1519
Eco24I	GRGCYC	2 cut(s)	287, 1661
Eco31I	GGTCTC	1 cut(s)	217
Eco32I	GATATC	1 cut(s)	1414
Eco47I	GGWCC	2 cut(s)	686, 848
Eco53kI	GAGCTC	2 cut(s)	285, 1659
Eco57I	CTGAAG	3 cut(s)	1130, 1854, 1899
Eco81I	CCTNAGG	1 cut(s)	132
Eco88I	CYCGRG	2 cut(s)	181, 918
EcoICRI	GAGCTC	2 cut(s)	285, 1659
EcoNI	CCTNNNNNAGG	1 cut(s)	760
EcoRI	GAATTC	2 cut(s)	654, 811
EcoRII	CCWGG	3 cut(s)	1031, 1116, 1379
EcoRV	GATATC	1 cut(s)	1414
EcoT14I	CCWWGG	6 cut(s)	114, 416, 542, 1103, 1229, 1318
EcoT38I	GRGCYC	2 cut(s)	287, 1661
ErhI	CCWWGG	6 cut(s)	114, 416, 542, 1103, 1229, 1318
FalI	AAGNNNNNCTT	2 cut(s)	995, 1027
FaqI	GGGAC	4 cut(s)	550, 620, 834, 1290
FauI	CCCGC	2 cut(s)	1207, 1467
FauNDI	CATATG	1 cut(s)	739
FbaI	TGATCA	1 cut(s)	1468
FblI	GTMKAC	2 cut(s)	1574, 1934
FokI	GGATG	7 cut(s)	29, 100, 398, 506, 782, 1142, 1190
FriOI	GRGCYC	2 cut(s)	287, 1661
FspBI	CTAG	2 cut(s)	288, 444
GlaI	GCGC	1 cut(s)	1088
GsaI	CCCAGC	2 cut(s)	606, 1129
GsuI	CTGGAG	3 cut(s)	102, 915, 1100
HaeIII	GGCC	7 cut(s)	138, 159, 356, 1010, 1093, 1519, 1890
HapII	CCGG	5 cut(s)	353, 713, 989, 1302, 1448
HgaI	GACGC	2 cut(s)	379, 547
HhaI	GCGC	1 cut(s)	1089
Hin1I	GRCGYC	1 cut(s)	539
Hin6I	GCGC	1 cut(s)	1087
HinP1I	GCGC	1 cut(s)	1087
HindIII	AAGCTT	1 cut(s)	593
HpaII	CCGG	5 cut(s)	353, 713, 989, 1302, 1448
HphI	GGTGA	9 cut(s)	118, 650, 970, 1092, 1215, 1301, 1671, 1754, 1805
Hpy166II	GTNNAC	6 cut(s)	583, 686, 910, 1575, 1625, 1935
Hpy188III	TCNNGA	7 cut(s)	172, 239, 851, 932, 1749, 1898, 1997
Hpy8I	GTNNAC	6 cut(s)	583, 686, 910, 1575, 1625, 1935
HpyAV	CCTTC	7 cut(s)	28, 32, 829, 955, 1228, 1345, 1790
HpyCH4III	ACNGT	8 cut(s)	425, 638, 800, 1397, 1572, 1675, 1859, 1911
HpyCH4IV	ACGT	1 cut(s)	8
HpyF3I	CTNAG	5 cut(s)	60, 132, 378, 489, 1638
HpySE526I	ACGT	1 cut(s)	8
Hsp92I	GRCGYC	1 cut(s)	539
HspAI	GCGC	1 cut(s)	1087
KroI	GCCGGC	1 cut(s)	352
KroNI	GCCGGC	1 cut(s)	354
Ksp22I	TGATCA	1 cut(s)	1468
Kzo9I	GATC	8 cut(s)	55, 235, 463, 640, 975, 1468, 1751, 1784
LmnI	GCTCC	2 cut(s)	1376, 1664
Lsp1109I	GCAGC	6 cut(s)	856, 977, 1341, 1618, 1654, 2109
LweI	GCATC	4 cut(s)	7, 376, 559, 1990
MaeI	CTAG	2 cut(s)	288, 444
MaeII	ACGT	1 cut(s)	8
MaeIII	GTNAC	4 cut(s)	1557, 1687, 1853, 2048
MalI	GATC	8 cut(s)	57, 237, 465, 642, 977, 1470, 1753, 1786
MboI	GATC	8 cut(s)	55, 235, 463, 640, 975, 1468, 1751, 1784
MboII	GAAGA	8 cut(s)	690, 744, 1020, 1034, 1246, 1249, 1601, 1892
MfeI	CAATTG	1 cut(s)	612
MflI	RGATCY	3 cut(s)	55, 975, 1751
MhlI	GDGCHC	3 cut(s)	287, 1661, 1992
MluI	ACGCGT	1 cut(s)	1159
MlyI	GAGTC	5 cut(s)	370, 602, 701, 832, 1883
MmeI	TCCRAC	2 cut(s)	363, 631
MroNI	GCCGGC	1 cut(s)	352
MroXI	GAANNNNTTC	1 cut(s)	1699
MseI	TTAA	3 cut(s)	327, 1002, 1155
MslI	CAYNNNNRTG	1 cut(s)	75
MspI	CCGG	5 cut(s)	353, 713, 989, 1302, 1448
MspR9I	CCNGG	4 cut(s)	990, 1033, 1118, 1381
MunI	CAATTG	1 cut(s)	612
Mva1269I	GAATGC	1 cut(s)	115
MvaI	CCWGG	3 cut(s)	1033, 1118, 1381
MvnI	CGCG	1 cut(s)	1161
NaeI	GCCGGC	1 cut(s)	354
NciI	CCSGG	1 cut(s)	990
NdeI	CATATG	1 cut(s)	739
NdeII	GATC	8 cut(s)	55, 235, 463, 640, 975, 1468, 1751, 1784
NgoMIV	GCCGGC	1 cut(s)	352
NlaIV	GGNNCC	7 cut(s)	57, 189, 276, 850, 1054, 1324, 1378
NmeAIII	GCCGAG	3 cut(s)	194, 437, 1801
NmuCI	GTSAC	3 cut(s)	1557, 1853, 2048
NspI	RCATGY	5 cut(s)	74, 1198, 1372, 1388, 1954
NspV	TTCGAA	1 cut(s)	815
PaeI	GCATGC	3 cut(s)	74, 1372, 1388
PaeR7I	CTCGAG	1 cut(s)	918
PaqCI	CACCTGC	1 cut(s)	707
PceI	AGGCCT	1 cut(s)	1519
PciI	ACATGT	1 cut(s)	1950
PctI	GAATGC	1 cut(s)	115
PdiI	GCCGGC	1 cut(s)	354
PdmI	GAANNNNTTC	1 cut(s)	1699
PfeI	GAWTC	8 cut(s)	338, 709, 854, 1025, 1097, 1510, 2080, 2090
PflFI	GACNNNGTC	1 cut(s)	379
PflMI	CCANNNNNTGG	1 cut(s)	567
PfoI	TCCNGGA	2 cut(s)	988, 1031
PleI	GAGTC	5 cut(s)	370, 602, 700, 831, 1882
PpsI	GAGTC	5 cut(s)	370, 602, 700, 831, 1882
PscI	ACATGT	1 cut(s)	1950
PshAI	GACNNNNGTC	1 cut(s)	691
PshBI	ATTAAT	1 cut(s)	327
Psp124BI	GAGCTC	2 cut(s)	287, 1661
Psp6I	CCWGG	3 cut(s)	1031, 1116, 1379
PspFI	CCCAGC	2 cut(s)	602, 1125
PspGI	CCWGG	3 cut(s)	1031, 1116, 1379
PspN4I	GGNNCC	7 cut(s)	57, 189, 276, 850, 1054, 1324, 1378
PspPI	GGNCC	4 cut(s)	136, 158, 686, 848
PspXI	VCTCGAGB	1 cut(s)	918
PsrI	GAACNNNNNNTAC	2 cut(s)	1125, 1157
PstI	CTGCAG	1 cut(s)	209
PsuI	RGATCY	3 cut(s)	55, 975, 1751
PsyI	GACNNNGTC	1 cut(s)	379
RsaI	GTAC	5 cut(s)	422, 574, 928, 1776, 1811
RsaNI	GTAC	5 cut(s)	421, 573, 927, 1775, 1810
RseI	CAYNNNNRTG	1 cut(s)	75
SacI	GAGCTC	2 cut(s)	287, 1661
SaqAI	TTAA	3 cut(s)	327, 1002, 1155
Sau3AI	GATC	8 cut(s)	55, 235, 463, 640, 975, 1468, 1751, 1784
Sau96I	GGNCC	4 cut(s)	136, 158, 686, 848
ScaI	AGTACT	2 cut(s)	574, 928
SchI	GAGTC	5 cut(s)	370, 602, 701, 832, 1883
ScrFI	CCNGG	4 cut(s)	990, 1033, 1118, 1381
SduI	GDGCHC	3 cut(s)	287, 1661, 1992
SfaNI	GCATC	4 cut(s)	7, 376, 559, 1990
SfcI	CTRYAG	1 cut(s)	205
Sfr274I	CTCGAG	1 cut(s)	918
SfuI	TTCGAA	1 cut(s)	815
SinI	GGWCC	2 cut(s)	686, 848
SlaI	CTCGAG	1 cut(s)	918
SmiMI	CAYNNNNRTG	1 cut(s)	75
SmlI	CTYRAG	1 cut(s)	918
SmoI	CTYRAG	1 cut(s)	918
SphI	GCATGC	3 cut(s)	74, 1372, 1388
SseBI	AGGCCT	1 cut(s)	1519
SsiI	CCGC	9 cut(s)	156, 191, 547, 629, 1108, 1200, 1460, 1604, 1891
SspMI	CTAG	2 cut(s)	288, 444
SstI	GAGCTC	2 cut(s)	287, 1661
StuI	AGGCCT	1 cut(s)	1519
StyD4I	CCNGG	4 cut(s)	988, 1031, 1116, 1379
StyI	CCWWGG	6 cut(s)	114, 416, 542, 1103, 1229, 1318
TaaI	ACNGT	8 cut(s)	425, 638, 800, 1397, 1572, 1675, 1859, 1911
TaiI	ACGT	1 cut(s)	11
TaqI	TCGA	5 cut(s)	165, 809, 815, 919, 1996
TatI	WGTACW	2 cut(s)	572, 926
TauI	GCSGC	4 cut(s)	159, 550, 1111, 1893
TfiI	GAWTC	8 cut(s)	338, 709, 854, 1025, 1097, 1510, 2080, 2090
Tru1I	TTAA	3 cut(s)	327, 1002, 1155
Tru9I	TTAA	3 cut(s)	327, 1002, 1155
TscAI	CASTG	3 cut(s)	1862, 1983, 2053
TseFI	GTSAC	3 cut(s)	1557, 1853, 2048
TseI	GCWGC	6 cut(s)	869, 965, 1329, 1606, 1642, 2097
Tsp45I	GTSAC	3 cut(s)	1557, 1853, 2048
TspDTI	ATGAA	7 cut(s)	217, 488, 1036, 1146, 1842, 1941, 2046
TspGWI	ACGGA	1 cut(s)	968
TspRI	CASTG	3 cut(s)	1862, 1983, 2053
Tth111I	GACNNNGTC	1 cut(s)	379
Van91I	CCANNNNNTGG	1 cut(s)	567
VpaK11BI	GGWCC	2 cut(s)	686, 848
VspI	ATTAAT	1 cut(s)	327
XagI	CCTNNNNNAGG	1 cut(s)	760
XapI	RAATTY	6 cut(s)	654, 811, 1490, 1744, 1840, 1966
XceI	RCATGY	5 cut(s)	74, 1198, 1372, 1388, 1954
XhoI	CTCGAG	1 cut(s)	918
XmiI	GTMKAC	2 cut(s)	1574, 1934
XmnI	GAANNNNTTC	1 cut(s)	1699
XspI	CTAG	2 cut(s)	288, 444
ZrmI	AGTACT	2 cut(s)	574, 928

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.