Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0006929

Physical Location & Seq

Genomic Coordinates Forward (+)

23293191 .. 23299128

Gene Structure 5938 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g19750.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2100 bp

ATGGCTTCAGCAAGCGGCAAGGCGGCGGCACAGTCGTCTTCAGGCACCAGCAATTTCCGTTCGGCTGGGCAGCAGCAGAACAATCACACTAGCACAGCAGCCGCGGAGTCGGTGAGCAAAGCGGTGGCGCAGTACACCGTCGACGCGCGGCTGCACGCCGTGTTCGAGCAGTCGGAGTCCGGTAAGTCATTCGACTACTCTCAGAGTATGAGAACCACCAAAGATTCCGTCCCGGAGCAGCAAATCACCGCCTACTTGTCCAAAATCCAGAGAGGCGGCCATATCCAGCCCTTCGGCTGCACTGTCGCCGTCGACGAGTCCACCTTCGCCGTCATTGCTTACAGCGAGAACGCCCGGGACCTTCTCGACTTGATGCCCCAGTCTGTCCCGGTGATGGAACGCCGCGAGATTCTGACGGTCGGCACCGACGTCAGGACGCTGTTCTCGCCGTCGAGCTCCACCTTGCTGGAGAAGGCCTTCGCTGCGAGAGAGATTACGCTATTGAATCCAATTTGGATTCACTCGAAGATTTCCGGGAAGCCGTTTTATGCTATATTGCATAGGATTGATGTTGGGGTTGTGATTGATTTGGAGCCTGCGAGGACTGAGGACCCGGCGCTGTCGATTGCCGGGGCAGTGCAGTCTCAGAAGCTTGCGGTGAGGGCGATATCGAAGCTGCAGTCGTTGCCTGGTGGGGATATTAAGCTGCTGTGTGACACTGTGGTGGAGAGTGTTAGGGAGCTTACGGGGTATGATAGAGTTATGGTGTATAAGTTTCATGAGGATGAGCATGGGGAGGTGTTGGCGGAGAGTAAGAGGGCGGATTTGGAGCCTTATCTTGGGCTGCATTATCCGGCTACTGATATACCGCAGGCGTCCAGGTTTTTGTTCAAGCAGAATAGGGTGAGAATGATTGTGGATTGTCATGCCACGCCGGTGCAGGTTATACAGGATGAGGGGCTTATGCAGCCTTTGTGCTTGGTTGGATCAACGCTGCGTGCGCCTCATGGTTGTCATTCGCAGTACATGGCTAATATGGGGTCAATTGCGTCGCTGGCGTTGGCGGTTATTATTAATGGAAATGATGATGAGGCTATTGGTGGGAGGAGCTCGATGAGGCTATGGGGGTTGGTTGTTTGCCATCACACTTCTGCGAGGTGCATTCCGTTTCCTCTGCGCTATGCTTGTGAGTTTCTGATGCAGGCTTTTGGTCTCCAGTTGAATATGGAATTGCAGTTGGCTGCACAGTTGTTGGAGAAGCATGTTTTGAGGACACAGACGCTCTTGTGTGATATGCTTCTTCGTGATACCCCGACTGGGATTGTTACTCAGAGTCCTAGTATCATGGATCTTGTCAAGTGTGATGGGGCAGCACTCTACTACCAAGACAAGTACTATCCAGTAGGTGTCACACCTACTGAAGCGCAGATCAAGGACATTGTTGAGTGGTTGTTGTCTTCACATGGGACTTCAACAGGCTTAAGCACTGACAGTTTGGGTGATGCGGGGTACCCTGGAGCTGCCTCACTTGGTGATGCTGTCTGCGGGATGGCTGCTGCTTATATTACTAAAAGGGACTTTCTGTTCTGGTTTCGATCCCACACCGCAAAAGAGGTGAAATGGGGTGGAGCAAAGCATCATCCTGAGGACAAGGATGATGGGCAGAGGATGCATCCACGTTCTTCATTCAAGGCGTTTTTGGAAGTGGTTAAAAGCCGTAGTTTGCCATGGGACAATGCAGAAATGGATGCCATCCATTCCTTGCAAATTATTTTGCGAGACTCGTTTAAGGATGCTGAGACAAACAATTTAAAGGCTGTTACAGAGAACCGGCATGGGGATCTAGAGATTCAAGGGATTGATGAGCTCAGCTCGGTAGCAAGAGAAATGGTTAGATTGATAGAGACTGCAACTGCTCCCATATTTGCTGTAGATGTTAATGGGCGTATAAATGGGTGGAATGCAAAGATTGCAGAGCTGACAGGGCTCTCAGTGGAGGAGGCTACAGGGAAGTCCTTAGTTCATGATCTCATTTACAAAGAATCTGAAGAAATTGTTGACAAACTTCTCATCCACGCTTTAAGAGAATTGGGTGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0008150 GO:0009657 GO:0009658 GO:0009902 GO:0009903 GO:0009987 GO:0016043 GO:0019750 GO:0044424 GO:0044464 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051644 GO:0051649 GO:0051656 GO:0051667 GO:0071840

KEGG Pathways

Metabolic & Signaling

ko04712 map04712

Pfam Domains

Protein Families

GAF HATPase_c HisKA PAS PAS_2 PHY

Protein Analysis

700

Amino Acids

76.72

Weight (kDa)

5.67

Isoelectric Point (pI)

45.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PAS_2	PF08446	84 - 200	8.2e-37	PAS fold
GAF	PF01590	234 - 411	1.8e-16	GAF domain
PHY	PF00360	424 - 598	2.7e-58	Phytochrome region
PAS	PF00989	629 - 690	7.5e-15	PAS fold

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006929)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g19750
malus_domestica	MD17G1116700.v1.1
pyrus_communis	pycom04g16280 pycom10g22360
rosa_chinensis	RchiOBHm_Chr2g0161111
rosa_laevigata	RLG00000013469 RLG00000028069
rosa_multiflora	Rmu_co8348701.1_g000001 Rmu_sc0000206.1_g000004 Rmu_sc0000780.1_g000014 Rmu_sc0004343.1_g000020 Rmu_sc0005828.1_g000007 Rmu_sc0007671.1_g000015 Rmu_sc0011620.1_g000002 Rmu_sc0012237.1_g000002 Rmu_sc0012589.1_g000001
rosa_rugosa	Rorug04G0078700
rosa_samantha	Rh1CG080300 Rh2AG233400 Rh2AG289500 Rh2DG314400 Rh6BG122600 Rh6CG121000 Rh6DG108700 Rh6DG223800 Rh7BG343600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	432
Acc36I	ACCTGC	1 cut(s)	931
Acc65I	GGTACC	1 cut(s)	1509
AccB1I	GGYRCC	3 cut(s)	44, 422, 1509
AccI	GTMKAC	2 cut(s)	141, 312
AccII	CGCG	4 cut(s)	104, 146, 148, 405
AclWI	GGATC	4 cut(s)	994, 1356, 1590, 1848
AcoI	YGGCCR	1 cut(s)	277
AcuI	CTGAAG	3 cut(s)	24, 1440, 2067
AcyI	GRCGYC	2 cut(s)	429, 875
AdeI	CACNNNGTG	2 cut(s)	160, 1532
AfaI	GTAC	4 cut(s)	134, 1025, 1394, 1511
AfiI	CCNNNNNNNGG	5 cut(s)	394, 432, 839, 1317, 1837
AflII	CTTAAG	1 cut(s)	1480
AgsI	TTSAA	6 cut(s)	505, 892, 1222, 1473, 1690, 1853
AjnI	CCWGG	3 cut(s)	688, 878, 1513
AleI	CACNNNNGTG	2 cut(s)	722, 935
AloI	GAACNNNNNNTCC	2 cut(s)	1568, 1600
Alw21I	GWGCWC	3 cut(s)	458, 1112, 1869
Alw26I	GTCTC	5 cut(s)	648, 1217, 1773, 1793, 1898
AlwI	GGATC	4 cut(s)	994, 1356, 1590, 1848
Ama87I	CYCGRG	1 cut(s)	354
AoxI	GGCC	2 cut(s)	277, 474
ArsI	GACNNNNNNTTYG	4 cut(s)	213, 245, 665, 697
AseI	ATTAAT	1 cut(s)	1074
Asp700I	GAANNNNTTC	1 cut(s)	476
Asp718I	GGTACC	1 cut(s)	1509
AspLEI	GCGC	6 cut(s)	130, 148, 619, 1003, 1179, 1426
AspS9I	GGNCC	2 cut(s)	358, 610
AsuC2I	CCSGG	7 cut(s)	233, 355, 356, 389, 535, 614, 631
AsuHPI	GGTGA	8 cut(s)	124, 238, 403, 670, 916, 1511, 1544, 1627
AvaI	CYCGRG	1 cut(s)	354
AvaII	GGWCC	2 cut(s)	358, 610
AxyI	CCTNAGG	1 cut(s)	1644
BanI	GGYRCC	3 cut(s)	44, 422, 1509
BanII	GRGCYC	4 cut(s)	458, 1112, 1869, 1989
BbsI	GAAGAC	2 cut(s)	30, 1449
Bbv12I	GWGCWC	3 cut(s)	458, 1112, 1869
BccI	CCATC	6 cut(s)	388, 1149, 1358, 1543, 1652, 1760
BceAI	ACGGC	6 cut(s)	143, 293, 314, 433, 526, 1701
BciT130I	CCWGG	3 cut(s)	690, 880, 1515
BcnI	CCSGG	7 cut(s)	233, 355, 356, 389, 535, 614, 631
BcoDI	GTCTC	5 cut(s)	648, 1217, 1773, 1793, 1898
BfaI	CTAG	3 cut(s)	90, 1338, 1844
BfmI	CTRYAG	3 cut(s)	677, 1929, 2004
BfoI	RGCGCY	1 cut(s)	620
BfrI	CTTAAG	1 cut(s)	1480
BfuAI	ACCTGC	1 cut(s)	931
BlpI	GCTNAGC	1 cut(s)	1868
BmcAI	AGTACT	1 cut(s)	1394
Bme18I	GGWCC	2 cut(s)	358, 610
BmeT110I	CYCGRG	1 cut(s)	354
BmgT120I	GGNCC	2 cut(s)	358, 610
BmiI	GGNNCC	7 cut(s)	46, 359, 424, 594, 612, 831, 1511
BmrI	ACTGGG	2 cut(s)	373, 1326
BmsI	GCATC	9 cut(s)	363, 1188, 1492, 1525, 1645, 1659, 1681, 1738, 1783
BmuI	ACTGGG	2 cut(s)	373, 1326
BpiI	GAAGAC	2 cut(s)	30, 1449
BplI	GAGNNNNNCTC	2 cut(s)	1856, 1888
BpmI	CTGGAG	3 cut(s)	488, 1199, 1536
Bpu1102I	GCTNAGC	1 cut(s)	1868
BpuMI	CCSGG	7 cut(s)	233, 355, 356, 389, 535, 614, 631
BsaHI	GRCGYC	2 cut(s)	429, 875
BsaI	GGTCTC	1 cut(s)	1217
BsaJI	CCNNGG	5 cut(s)	102, 354, 630, 1513, 1727
BsaWI	WCCGGW	1 cut(s)	179
Bsc4I	CCNNNNNNNGG	5 cut(s)	394, 432, 839, 1317, 1837
Bse118I	RCCGGY	2 cut(s)	934, 1830
Bse1I	ACTGG	4 cut(s)	379, 1216, 1321, 1400
Bse21I	CCTNAGG	1 cut(s)	1644
Bse3DI	GCAATG	1 cut(s)	333
BseBI	CCWGG	3 cut(s)	690, 880, 1515
BseDI	CCNNGG	5 cut(s)	102, 354, 630, 1513, 1727
BseLI	CCNNNNNNNGG	5 cut(s)	394, 432, 839, 1317, 1837
BseMI	GCAATG	1 cut(s)	333
BseMII	CTCAG	8 cut(s)	215, 597, 659, 1343, 1635, 1788, 1882, 2004
BseNI	ACTGG	4 cut(s)	379, 1216, 1321, 1400
BseRI	GAGGAG	2 cut(s)	1120, 2012
BseYI	CCCAGC	1 cut(s)	65
BsgI	GTGCAG	5 cut(s)	137, 283, 659, 959, 1227
Bsh1236I	CGCG	4 cut(s)	104, 146, 148, 405
Bsh1285I	CGRYCG	1 cut(s)	420
BshFI	GGCC	2 cut(s)	279, 476
BshNI	GGYRCC	3 cut(s)	44, 422, 1509
BsiEI	CGRYCG	1 cut(s)	420
BsiHKAI	GWGCWC	3 cut(s)	458, 1112, 1869
BsiHKCI	CYCGRG	1 cut(s)	354
BslFI	GGGAC	6 cut(s)	215, 371, 371, 1480, 1589, 1745
BslI	CCNNNNNNNGG	5 cut(s)	394, 432, 839, 1317, 1837
BsmAI	GTCTC	5 cut(s)	648, 1217, 1773, 1793, 1898
BsmFI	GGGAC	6 cut(s)	215, 371, 371, 1480, 1589, 1745
BsmI	GAATGC	2 cut(s)	1161, 1966
BsnI	GGCC	2 cut(s)	279, 476
Bso31I	GGTCTC	1 cut(s)	1217
BsoBI	CYCGRG	1 cut(s)	354
Bsp1286I	GDGCHC	4 cut(s)	458, 1112, 1869, 1989
Bsp143I	GATC	6 cut(s)	986, 1348, 1428, 1595, 1840, 2026
Bsp1720I	GCTNAGC	1 cut(s)	1868
Bsp19I	CCATGG	1 cut(s)	1727
BspANI	GGCC	2 cut(s)	279, 476
BspCNI	CTCAG	8 cut(s)	214, 598, 658, 1342, 1636, 1789, 1881, 2003
BspFNI	CGCG	4 cut(s)	104, 146, 148, 405
BspHI	TCATGA	2 cut(s)	778, 2023
BspLI	GGNNCC	7 cut(s)	46, 359, 424, 594, 612, 831, 1511
BspMAI	CTGCAG	1 cut(s)	681
BspMI	ACCTGC	1 cut(s)	931
BspPI	GGATC	4 cut(s)	994, 1356, 1590, 1848
BspT107I	GGYRCC	3 cut(s)	44, 422, 1509
BspTI	CTTAAG	1 cut(s)	1480
BspTNI	GGTCTC	1 cut(s)	1217
BsrDI	GCAATG	1 cut(s)	333
BsrFI	RCCGGY	2 cut(s)	934, 1830
BsrI	ACTGG	4 cut(s)	379, 1216, 1321, 1400
BssAI	RCCGGY	2 cut(s)	934, 1830
BssECI	CCNNGG	5 cut(s)	102, 354, 630, 1513, 1727
BssMI	GATC	6 cut(s)	986, 1348, 1428, 1595, 1840, 2026
BssNI	GRCGYC	2 cut(s)	429, 875
BssT1I	CCWWGG	1 cut(s)	1727
Bst2UI	CCWGG	3 cut(s)	690, 880, 1515
Bst4CI	ACNGT	7 cut(s)	33, 139, 304, 418, 721, 1248, 1493
BstACI	GRCGYC	2 cut(s)	429, 875
BstAFI	CTTAAG	1 cut(s)	1480
BstAPI	GCANNNNNTGC	3 cut(s)	685, 1669, 1970
BstC8I	GCNNGC	8 cut(s)	13, 156, 597, 654, 873, 999, 1056, 1203
BstDEI	CTNAG	9 cut(s)	201, 606, 645, 1329, 1644, 1797, 1868, 1990, 2017
BstDSI	CCRYGG	2 cut(s)	102, 1727
BstFNI	CGCG	4 cut(s)	104, 146, 148, 405
BstH2I	RGCGCY	1 cut(s)	620
BstHHI	GCGC	6 cut(s)	130, 148, 619, 1003, 1179, 1426
BstKTI	GATC	6 cut(s)	989, 1351, 1431, 1598, 1843, 2029
BstMAI	GTCTC	5 cut(s)	648, 1217, 1773, 1793, 1898
BstMBI	GATC	6 cut(s)	986, 1348, 1428, 1595, 1840, 2026
BstMCI	CGRYCG	1 cut(s)	420
BstNI	CCWGG	3 cut(s)	690, 880, 1515
BstNSI	RCATGY	1 cut(s)	1265
BstSFI	CTRYAG	3 cut(s)	677, 1929, 2004
BstUI	CGCG	4 cut(s)	104, 146, 148, 405
BstV2I	GAAGAC	2 cut(s)	30, 1449
BstX2I	RGATCY	2 cut(s)	1348, 1840
BstXI	CCANNNNNNTGG	1 cut(s)	466
BstYI	RGATCY	2 cut(s)	1348, 1840
Bsu36I	CCTNAGG	1 cut(s)	1644
BsuRI	GGCC	2 cut(s)	279, 476
BtgI	CCRYGG	2 cut(s)	102, 1727
BtsI	GCAGTG	1 cut(s)	642
BtsIMutI	CAGTG	5 cut(s)	300, 642, 717, 1485, 1998
BveI	ACCTGC	1 cut(s)	931
Cac8I	GCNNGC	8 cut(s)	13, 156, 597, 654, 873, 999, 1056, 1203
CciI	TCATGA	2 cut(s)	778, 2023
CfoI	GCGC	6 cut(s)	130, 148, 619, 1003, 1179, 1426
Cfr10I	RCCGGY	2 cut(s)	934, 1830
Cfr13I	GGNCC	2 cut(s)	358, 610
Cfr42I	CCGCGG	1 cut(s)	105
Cfr9I	CCCGGG	1 cut(s)	354
CseI	GACGC	5 cut(s)	152, 445, 864, 1038, 1288
Csp6I	GTAC	4 cut(s)	133, 1024, 1393, 1510
CviQI	GTAC	4 cut(s)	133, 1024, 1393, 1510
DdeI	CTNAG	9 cut(s)	201, 606, 645, 1329, 1644, 1797, 1868, 1990, 2017
DpnI	GATC	6 cut(s)	988, 1350, 1430, 1597, 1842, 2028
DpnII	GATC	6 cut(s)	986, 1348, 1428, 1595, 1840, 2026
DraI	TTTAAA	1 cut(s)	1812
DraIII	CACNNNGTG	2 cut(s)	160, 1532
EaeI	YGGCCR	1 cut(s)	277
EciI	GGCGGA	2 cut(s)	821, 836
Ecl136II	GAGCTC	3 cut(s)	456, 1110, 1867
Eco130I	CCWWGG	1 cut(s)	1727
Eco147I	AGGCCT	1 cut(s)	476
Eco24I	GRGCYC	4 cut(s)	458, 1112, 1869, 1989
Eco31I	GGTCTC	1 cut(s)	1217
Eco32I	GATATC	1 cut(s)	669
Eco47I	GGWCC	2 cut(s)	358, 610
Eco53kI	GAGCTC	3 cut(s)	456, 1110, 1867
Eco57I	CTGAAG	3 cut(s)	24, 1440, 2067
Eco81I	CCTNAGG	1 cut(s)	1644
Eco88I	CYCGRG	1 cut(s)	354
EcoICRI	GAGCTC	3 cut(s)	456, 1110, 1867
EcoO109I	RGGNCCY	2 cut(s)	358, 610
EcoRII	CCWGG	3 cut(s)	688, 878, 1513
EcoRV	GATATC	1 cut(s)	669
EcoT14I	CCWWGG	1 cut(s)	1727
EcoT22I	ATGCAT	1 cut(s)	1674
EcoT38I	GRGCYC	4 cut(s)	458, 1112, 1869, 1989
ErhI	CCWWGG	1 cut(s)	1727
FaqI	GGGAC	6 cut(s)	215, 371, 371, 1480, 1589, 1745
FauI	CCCGC	2 cut(s)	1498, 1538
FblI	GTMKAC	2 cut(s)	141, 312
FriOI	GRGCYC	4 cut(s)	458, 1112, 1869, 1989
FspBI	CTAG	3 cut(s)	90, 1338, 1844
GlaI	GCGC	6 cut(s)	129, 147, 618, 1002, 1178, 1425
GsaI	CCCAGC	1 cut(s)	69
GsuI	CTGGAG	3 cut(s)	488, 1199, 1536
HaeII	RGCGCY	1 cut(s)	620
HaeIII	GGCC	2 cut(s)	279, 476
HgaI	GACGC	5 cut(s)	152, 445, 864, 1038, 1288
HhaI	GCGC	6 cut(s)	130, 148, 619, 1003, 1179, 1426
Hin1I	GRCGYC	2 cut(s)	429, 875
Hin6I	GCGC	6 cut(s)	128, 146, 617, 1001, 1177, 1424
HinP1I	GCGC	6 cut(s)	128, 146, 617, 1001, 1177, 1424
HincII	GTYRAC	3 cut(s)	142, 313, 2059
HindII	GTYRAC	3 cut(s)	142, 313, 2059
HindIII	AAGCTT	1 cut(s)	650
HphI	GGTGA	8 cut(s)	124, 238, 403, 670, 916, 1511, 1544, 1627
Hpy166II	GTNNAC	5 cut(s)	135, 142, 313, 321, 2059
Hpy188I	TCNGA	7 cut(s)	175, 204, 414, 648, 1197, 1332, 2047
Hpy188III	TCNNGA	8 cut(s)	268, 365, 433, 779, 1304, 1643, 1844, 2024
Hpy8I	GTNNAC	5 cut(s)	135, 142, 313, 321, 2059
Hpy99I	CGWCG	7 cut(s)	143, 146, 314, 317, 431, 454, 1054
HpyAV	CCTTC	5 cut(s)	301, 334, 371, 466, 487
HpyCH4III	ACNGT	7 cut(s)	33, 139, 304, 418, 721, 1248, 1493
HpyCH4IV	ACGT	2 cut(s)	429, 1678
HpyF3I	CTNAG	9 cut(s)	201, 606, 645, 1329, 1644, 1797, 1868, 1990, 2017
HpySE526I	ACGT	2 cut(s)	429, 1678
Hsp92I	GRCGYC	2 cut(s)	429, 875
HspAI	GCGC	6 cut(s)	128, 146, 617, 1001, 1177, 1424
KpnI	GGTACC	1 cut(s)	1513
KspI	CCGCGG	1 cut(s)	105
Kzo9I	GATC	6 cut(s)	986, 1348, 1428, 1595, 1840, 2026
LmnI	GCTCC	9 cut(s)	235, 461, 592, 739, 829, 1107, 1517, 1628, 1921
LweI	GCATC	9 cut(s)	363, 1188, 1492, 1525, 1645, 1659, 1681, 1738, 1783
MaeI	CTAG	3 cut(s)	90, 1338, 1844
MaeII	ACGT	2 cut(s)	429, 1678
MaeIII	GTNAC	4 cut(s)	713, 1324, 1408, 1819
MalI	GATC	6 cut(s)	988, 1350, 1430, 1597, 1842, 2028
MboI	GATC	6 cut(s)	986, 1348, 1428, 1595, 1840, 2026
MboII	GAAGA	6 cut(s)	30, 538, 1292, 1449, 1674, 2060
MfeI	CAATTG	1 cut(s)	1044
MflI	RGATCY	2 cut(s)	1348, 1840
MhlI	GDGCHC	4 cut(s)	458, 1112, 1869, 1989
MluCI	AATT	8 cut(s)	52, 510, 1044, 1229, 1767, 1807, 2052, 2087
MlyI	GAGTC	5 cut(s)	116, 185, 326, 1342, 1775
MmeI	TCCRAC	3 cut(s)	153, 964, 1233
Mph1103I	ATGCAT	1 cut(s)	1674
MroXI	GAANNNNTTC	1 cut(s)	476
MseI	TTAA	8 cut(s)	702, 1074, 1481, 1710, 1788, 1811, 1938, 2081
MslI	CAYNNNNRTG	3 cut(s)	722, 783, 935
MspA1I	CMGCKG	1 cut(s)	104
MspCI	CTTAAG	1 cut(s)	1480
MunI	CAATTG	1 cut(s)	1044
Mva1269I	GAATGC	2 cut(s)	1161, 1966
MvaI	CCWGG	3 cut(s)	690, 880, 1515
MvnI	CGCG	4 cut(s)	104, 146, 148, 405
NciI	CCSGG	7 cut(s)	233, 355, 356, 389, 535, 614, 631
NcoI	CCATGG	1 cut(s)	1727
NdeII	GATC	6 cut(s)	986, 1348, 1428, 1595, 1840, 2026
NlaIV	GGNNCC	7 cut(s)	46, 359, 424, 594, 612, 831, 1511
NmuCI	GTSAC	2 cut(s)	713, 1408
NsiI	ATGCAT	1 cut(s)	1674
NspI	RCATGY	1 cut(s)	1265
OliI	CACNNNNGTG	2 cut(s)	722, 935
PagI	TCATGA	2 cut(s)	778, 2023
PceI	AGGCCT	1 cut(s)	476
PcsI	WCGNNNNNNNCGW	3 cut(s)	162, 312, 426
PctI	GAATGC	2 cut(s)	1161, 1966
PdmI	GAANNNNTTC	1 cut(s)	476
PfeI	GAWTC	6 cut(s)	224, 409, 505, 517, 1849, 2042
PfoI	TCCNGGA	2 cut(s)	231, 533
PleI	GAGTC	5 cut(s)	115, 184, 325, 1341, 1775
PpsI	GAGTC	5 cut(s)	115, 184, 325, 1341, 1775
PpuMI	RGGWCCY	2 cut(s)	358, 610
PshBI	ATTAAT	1 cut(s)	1074
Psp124BI	GAGCTC	3 cut(s)	458, 1112, 1869
Psp5II	RGGWCCY	2 cut(s)	358, 610
Psp6I	CCWGG	3 cut(s)	688, 878, 1513
PspFI	CCCAGC	1 cut(s)	65
PspGI	CCWGG	3 cut(s)	688, 878, 1513
PspN4I	GGNNCC	7 cut(s)	46, 359, 424, 594, 612, 831, 1511
PspPI	GGNCC	2 cut(s)	358, 610
PspPPI	RGGWCCY	2 cut(s)	358, 610
PstI	CTGCAG	1 cut(s)	681
PsuI	RGATCY	2 cut(s)	1348, 1840
RsaI	GTAC	4 cut(s)	134, 1025, 1394, 1511
RsaNI	GTAC	4 cut(s)	133, 1024, 1393, 1510
RseI	CAYNNNNRTG	3 cut(s)	722, 783, 935
SacI	GAGCTC	3 cut(s)	458, 1112, 1869
SacII	CCGCGG	1 cut(s)	105
SalI	GTCGAC	2 cut(s)	140, 311
SaqAI	TTAA	8 cut(s)	702, 1074, 1481, 1710, 1788, 1811, 1938, 2081
Sau3AI	GATC	6 cut(s)	986, 1348, 1428, 1595, 1840, 2026
Sau96I	GGNCC	2 cut(s)	358, 610
ScaI	AGTACT	1 cut(s)	1394
SchI	GAGTC	5 cut(s)	116, 185, 326, 1342, 1775
SduI	GDGCHC	4 cut(s)	458, 1112, 1869, 1989
SfaNI	GCATC	9 cut(s)	363, 1188, 1492, 1525, 1645, 1659, 1681, 1738, 1783
SfcI	CTRYAG	3 cut(s)	677, 1929, 2004
Sfr303I	CCGCGG	1 cut(s)	105
SgrAI	CRCCGGYG	1 cut(s)	934
SgrBI	CCGCGG	1 cut(s)	105
SgrDI	CGTCGACG	2 cut(s)	140, 311
SinI	GGWCC	2 cut(s)	358, 610
SmaI	CCCGGG	1 cut(s)	356
SmiMI	CAYNNNNRTG	3 cut(s)	722, 783, 935
SmlI	CTYRAG	1 cut(s)	1480
SmoI	CTYRAG	1 cut(s)	1480
Sse9I	AATT	8 cut(s)	52, 510, 1044, 1229, 1767, 1807, 2052, 2087
SseBI	AGGCCT	1 cut(s)	476
SspMI	CTAG	3 cut(s)	90, 1338, 1844
SstI	GAGCTC	3 cut(s)	458, 1112, 1869
StuI	AGGCCT	1 cut(s)	476
StyI	CCWWGG	1 cut(s)	1727
TaaI	ACNGT	7 cut(s)	33, 139, 304, 418, 721, 1248, 1493
TaiI	ACGT	2 cut(s)	432, 1681
TasI	AATT	8 cut(s)	52, 510, 1044, 1229, 1767, 1807, 2052, 2087
TatI	WGTACW	3 cut(s)	132, 1023, 1392
TauI	GCSGC	7 cut(s)	18, 26, 29, 104, 151, 279, 405
TfiI	GAWTC	6 cut(s)	224, 409, 505, 517, 1849, 2042
Tru1I	TTAA	8 cut(s)	702, 1074, 1481, 1710, 1788, 1811, 1938, 2081
Tru9I	TTAA	8 cut(s)	702, 1074, 1481, 1710, 1788, 1811, 1938, 2081
TscAI	CASTG	5 cut(s)	307, 642, 724, 1492, 1998
TseFI	GTSAC	2 cut(s)	713, 1408
Tsp45I	GTSAC	2 cut(s)	713, 1408
TspDTI	ATGAA	3 cut(s)	767, 1674, 2012
TspGWI	ACGGA	3 cut(s)	47, 217, 1155
TspMI	CCCGGG	1 cut(s)	354
TspRI	CASTG	5 cut(s)	307, 642, 724, 1492, 1998
Vha464I	CTTAAG	1 cut(s)	1480
VpaK11BI	GGWCC	2 cut(s)	358, 610
VspI	ATTAAT	1 cut(s)	1074
XbaI	TCTAGA	1 cut(s)	1843
XceI	RCATGY	1 cut(s)	1265
XmaI	CCCGGG	1 cut(s)	354
XmiI	GTMKAC	2 cut(s)	141, 312
XmnI	GAANNNNTTC	1 cut(s)	476
XspI	CTAG	3 cut(s)	90, 1338, 1844
ZraI	GACGTC	1 cut(s)	430
ZrmI	AGTACT	1 cut(s)	1394
Zsp2I	ATGCAT	1 cut(s)	1674

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.