Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0001550

Physical Location & Seq

Genomic Coordinates Reverse (-)

6240220 .. 6244454

Gene Structure 4235 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g11060.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2250 bp

ATGACAGAGAGCAGCAGAGAAGAAGAACACAACCAAGACGAAATCACAGCTCCTCTCATTTCTAGAGATGAAGAAGGTCAGACCTCCTCATCTCCACCGGAAGAAGAAGAAAACTCGCCGGTGAAGCAAGTAGCTCTGACGGTGCCGACCGGAGACGACCCTTCCCTCCCCGTCCTGACCTTCCGAATGTGGGTCCTAGGAACCCTCTCCTGCGTCCTCCTCTCTTTCCTCAACCAGTTCTTTTGGTACCGGACCGAGCCGCTGTCGATAACAGCCATCTCGGCCCAGATAGCAGTCGTGCCCCTCGGCCAGCTCATGGCCGCTAATATCACGACGCGCGTCTTCTTCAAAGGAACCAGATGGGAATTCACACTCAACCCTGGTCCCTTCAACGTAAAAGAACACGTCCTCATCACCATCTTCGCCAACTCCGGCGCCGGCACAGTCTATGCCATTCATATTGTGACGGTGGTTAAGGTTTTCTACAAGCAGCACATCACGTTCTTCGTCTCCTTGCTTGTCATCTTAACAACTCAGGTGTTGGGGTTTGGCTGGGCTGGGATTTTCAGGAGGTACTTGGTCGAACCGGCAGCTATGTGGTGGCCGGCAAATTTGGTTCAAGTCTCATTGTTTAGGGCCCTCCACGAGAGGGAAGAACGACCAAAGGGTGGCGTGACAAGGACACAGTTCTTTCTCATTGCCTTCATGTGCAGTTTTGCTTACTATGTATTTCCCGGCTACCTCTTCACAATGCTAACCTCCCTCTCATGGATCTGCTGGATATTTCCCTCATCAGTCCTTGCCCAACAGATCGGGTCGGGTCTTTACGGGCTTGGACTTGGTGCTGTTGGGCTCGACTGGTCCACTATCTCCTCCTACCTCGGAAGCCCACTTGCAAGCCCATGGTTTGCCACTGCCAATGTTGCTGCTGGTTTTGTGTTTGTCATGTATGTGTTGACTCCCATATGTTACTGGCTTAACCTCTACAAAGCCAAAACCTTTCCAATATTTTCAGATGAACTCTTCACGGAAGACGGTCAAGAATACGACATCACAGCGATCATTGACTCCAATTTCCATCTCAATATTACGGCTTATGAGGAAGAAGGTCCACTTTACATCAGCACATTTTTTGCGATGACTTATGGTGTGGGCTTTGCTGCACTCACTGCTACAGTTGTTCATGTTGCACTCTTCCATGGAAGGGAAATATGGGAGCAAAGCAAATCAAGTTTCAAGGAGAAGAGAATGGACATTCACACTAGACTTATGCAGAGATACAACCCAGTGCCTGAGTGGTGGTTTGTGGCCATTCTTCTAACTAACATTGCACTCACCATTTTTACCTGTGAATACTACAATGACCAGCTTCAATTGCCTTGGTGGGGTGTCCTTCTAGCTTGTGCTATTGCCATTTTGTTCACCCTCCCAATTGGTATCATCACAGCCATCACAAATCAGACACCAGGCTTGAATATCATTACTGAGTACATAATAGGGTACATCTACCCTGGATATCCAGTCGCCAATATGTGCTTCAAAGTTTACGGCTACATAAGTATGACACAAGCCATCACATTCTTGCAAGACTTCAAGCTTGGTCACTATATGAAAATCCCTCCTAGAACTATGTTCATGGCACAGGTTGTTGGAACCCTTATAGCGGCGTTTGTTTACTTGTGCACGGCGTGGTGGCTAATGGAGACCATCCCCGGAATATGTACTGACACAACATCAGTGTGGACTTGCCCCATGGACACTGTGTTTTACGACGCGTCTGTCCTATGGGGACTGATTGGTCCACGAAGAATTTTCGGGGACTTGGGCACATATGCAGCAGTGAATTGGTTCTTCCTAGCTGGTGCAATTGCTCCTGTTCTAGTTTGGTTAGCTGCTAAGGCATTTCCACAACAGGAGTGGATTCGGCTCATCAACATGCCGGTTTTGATTGGAGCAACGGGAAGTATGCCGCCGGCCACTGCCGTTAACTACACTTCTTGGATCATTTTGGGGTTTCTCTCCGGTTTTGTTGTGTATAGGTATAGACCAGATTGGTGGAGGAGACACAACTATGTTCTTTCTGGGGCACTTGATGCTGGTCTTGCTTTTATGGGGGTACTGTTATATTTTACCGTTGGATTGGAGGAAATTAGTGTCGACTGGTGGGGAAATGACCTTGATGGGTGTCCATTAGCTGAATGCCCTACGGCCGTAGGGGTGATTGTTGCTGGCTGCCCTGTTTTCACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006857 GO:0008150 GO:0015833 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0031226 GO:0035672 GO:0035673 GO:0042886 GO:0042887 GO:0044425 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OPT

Protein Analysis

750

Amino Acids

84.13

Weight (kDa)

5.15

Isoelectric Point (pI)

42.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
OPT	PF03169	2 - 476	1e-125	OPT oligopeptide transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001550)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G10770 AT4G10770
fragaria_vesca	FvH4_1g11690 FvH4_1g11690 FvH4_1g11690 FvH4_1g11690 FvH4_1g11690 FvH4_5g11060 FvH4_5g11060 FvH4_5g11060 FvH4_5g11060 FvH4_5g11060
malus_domestica	MD02G1129900.v1.1 MD06G1116800.v1.1 MD14G1124200.v1.1
prunus_persica	Prupe.5G128100_v2.0.a1 Prupe.5G128100_v2.0.a1 Prupe.5G128100_v2.0.a1 Prupe.5G128100_v2.0.a1 Prupe.7G169800_v2.0.a1 Prupe.7G169800_v2.0.a1 Prupe.7G169800_v2.0.a1
pyrus_communis	pycom02g10180 pycom06g10890 pycom14g11000
rosa_chinensis	RchiOBHm_Chr2g0099261 RchiOBHm_Chr7g0186741
rosa_laevigata	RLG00000004820 RLG00000016866
rosa_multiflora	Rmu_co8201022.1_g000001 Rmu_co8437885.1_g000001 Rmu_co8448977.1_g000001 Rmu_sc0009734.1_g000005
rosa_roxburghii	Rroxscaffold_2G00143270 Rroxscaffold_3G00267870
rosa_rugosa	Rorug02G0078300 Rorug02G0078300 Rorug02G0078300 Rorug06G0476200 Rorug06G0476300
rosa_samantha	Rh2AG127500 Rh2BG130500 Rh2CG131700 Rh2DG132100 Rh7AG064300 Rh7BG080800 Rh7CG083200 Rh7DG084100
rosa_wichuraiana	Rw2G009840 Rw7G007210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	1778, 1797
Acc65I	GGTACC	1 cut(s)	246
AccB1I	GGYRCC	3 cut(s)	142, 246, 434
AccB7I	CCANNNNNTGG	2 cut(s)	316, 668
AccI	GTMKAC	1 cut(s)	2157
AccII	CGCG	3 cut(s)	337, 339, 1775
AciI	CCGC	4 cut(s)	260, 321, 1664, 1970
AclWI	GGATC	2 cut(s)	779, 2009
AcoI	YGGCCR	6 cut(s)	307, 318, 602, 1308, 1974, 2208
AcsI	RAATTY	3 cut(s)	365, 610, 1809
AcyI	GRCGYC	1 cut(s)	435
AdeI	CACNNNGTG	1 cut(s)	1689
AfaI	GTAC	6 cut(s)	248, 575, 1490, 1502, 1723, 2118
AfiI	CCNNNNNNNGG	8 cut(s)	190, 316, 649, 668, 768, 1204, 1385, 1663
AflIII	ACRYGT	2 cut(s)	403, 1773
AgsI	TTSAA	8 cut(s)	349, 391, 620, 1237, 1373, 1474, 1540, 1594
AjiI	CACGTC	1 cut(s)	406
AjnI	CCWGG	3 cut(s)	379, 1465, 1510
AjuI	GAANNNNNNNTTGG	2 cut(s)	1520, 1552
Alw21I	GWGCWC	1 cut(s)	1685
Alw26I	GTCTC	5 cut(s)	147, 514, 628, 1697, 2056
Alw44I	GTGCAC	1 cut(s)	1681
AlwI	GGATC	2 cut(s)	779, 2009
AlwNI	CAGNNNCTG	1 cut(s)	1292
AoxI	GGCC	8 cut(s)	282, 307, 318, 602, 636, 1308, 1974, 2208
ApaI	GGGCCC	1 cut(s)	640
ApaLI	GTGCAC	1 cut(s)	1681
ApeKI	GCWGC	8 cut(s)	12, 490, 590, 926, 1160, 1835, 1892, 2232
ApoI	RAATTY	3 cut(s)	365, 610, 1809
Asp700I	GAANNNNTTC	1 cut(s)	1847
Asp718I	GGTACC	1 cut(s)	246
AspA2I	CCTAGG	1 cut(s)	196
AspLEI	GCGC	2 cut(s)	339, 437
AspS9I	GGNCC	9 cut(s)	193, 252, 283, 383, 636, 637, 861, 1109, 1799
AsuC2I	CCSGG	2 cut(s)	735, 1713
AsuHPI	GGTGA	5 cut(s)	133, 406, 1327, 1414, 2230
AvaII	GGWCC	6 cut(s)	193, 252, 383, 861, 1109, 1799
AvrII	CCTAGG	1 cut(s)	196
BaeGI	GKGCMC	5 cut(s)	303, 640, 1685, 1829, 2089
BalI	TGGCCA	1 cut(s)	1310
BanI	GGYRCC	3 cut(s)	142, 246, 434
BanII	GRGCYC	2 cut(s)	640, 855
BauI	CACGAG	1 cut(s)	644
BbsI	GAAGAC	2 cut(s)	334, 1038
Bbv12I	GWGCWC	1 cut(s)	1685
BbvI	GCAGC	8 cut(s)	24, 502, 602, 913, 1147, 1847, 1879, 2219
BccI	CCATC	8 cut(s)	284, 354, 425, 1086, 1457, 1580, 1715, 2174
BceAI	ACGGC	6 cut(s)	1107, 1564, 1701, 1967, 2195, 2223
BciT130I	CCWGG	3 cut(s)	381, 1467, 1512
BcnI	CCSGG	2 cut(s)	735, 1713
BcoDI	GTCTC	5 cut(s)	147, 514, 628, 1697, 2056
BfaI	CTAG	7 cut(s)	63, 197, 1263, 1397, 1623, 1856, 1880
BfmI	CTRYAG	1 cut(s)	1173
BfoI	RGCGCY	1 cut(s)	438
BglI	GCCNNNNNGGC	1 cut(s)	281
BlnI	CCTAGG	1 cut(s)	196
Bme1390I	CCNGG	5 cut(s)	381, 735, 1467, 1512, 1713
Bme18I	GGWCC	6 cut(s)	193, 252, 383, 861, 1109, 1799
BmgBI	CACGTC	1 cut(s)	406
BmgT120I	GGNCC	9 cut(s)	193, 252, 283, 383, 636, 637, 861, 1109, 1799
BmiI	GGNNCC	9 cut(s)	144, 194, 202, 248, 355, 385, 436, 638, 1654
BmrFI	CCNGG	5 cut(s)	381, 735, 1467, 1512, 1713
BmrI	ACTGGG	1 cut(s)	1280
BmsI	GCATC	1 cut(s)	2083
BmuI	ACTGGG	1 cut(s)	1280
BoxI	GACNNNNGTC	1 cut(s)	338
BpiI	GAAGAC	2 cut(s)	334, 1038
Bpu10I	CCTNAGC	1 cut(s)	1896
BpuMI	CCSGG	2 cut(s)	735, 1713
BsaHI	GRCGYC	1 cut(s)	435
BsaI	GGTCTC	1 cut(s)	1697
BsaWI	WCCGGW	4 cut(s)	97, 149, 249, 2021
Bsc4I	CCNNNNNNNGG	8 cut(s)	190, 316, 649, 668, 768, 1204, 1385, 1663
Bse118I	RCCGGY	6 cut(s)	118, 437, 586, 604, 1939, 1972
Bse1I	ACTGG	6 cut(s)	235, 863, 977, 1286, 1520, 2165
Bse3DI	GCAATG	2 cut(s)	696, 1326
BseBI	CCWGG	3 cut(s)	381, 1467, 1512
BseGI	GGATG	1 cut(s)	1707
BseLI	CCNNNNNNNGG	8 cut(s)	190, 316, 649, 668, 768, 1204, 1385, 1663
BseMI	GCAATG	2 cut(s)	696, 1326
BseMII	CTCAG	3 cut(s)	548, 1284, 1476
BseNI	ACTGG	6 cut(s)	235, 863, 977, 1286, 1520, 2165
BseRI	GAGGAG	5 cut(s)	42, 76, 209, 862, 2074
BseSI	GKGCMC	5 cut(s)	303, 640, 1685, 1829, 2089
BseX3I	CGGCCG	1 cut(s)	2208
BseXI	GCAGC	8 cut(s)	24, 502, 602, 913, 1147, 1847, 1879, 2219
BseYI	CCCAGC	2 cut(s)	552, 557
BsgI	GTGCAG	2 cut(s)	730, 1146
Bsh1236I	CGCG	3 cut(s)	337, 339, 1775
Bsh1285I	CGRYCG	2 cut(s)	150, 2211
BshFI	GGCC	8 cut(s)	284, 309, 320, 604, 638, 1310, 1976, 2210
BshNI	GGYRCC	3 cut(s)	142, 246, 434
BsiEI	CGRYCG	2 cut(s)	150, 2211
BsiHKAI	GWGCWC	1 cut(s)	1685
BslFI	GGGAC	3 cut(s)	369, 1803, 1832
BslI	CCNNNNNNNGG	8 cut(s)	190, 316, 649, 668, 768, 1204, 1385, 1663
BsmAI	GTCTC	5 cut(s)	147, 514, 628, 1697, 2056
BsmBI	CGTCTC	2 cut(s)	147, 514
BsmFI	GGGAC	3 cut(s)	369, 1803, 1832
BsmI	GAATGC	1 cut(s)	2204
BsnI	GGCC	8 cut(s)	284, 309, 320, 604, 638, 1310, 1976, 2210
Bso31I	GGTCTC	1 cut(s)	1697
Bsp120I	GGGCCC	1 cut(s)	636
Bsp1286I	GDGCHC	6 cut(s)	303, 640, 855, 1685, 1829, 2089
Bsp143I	GATC	4 cut(s)	771, 810, 1059, 2001
Bsp19I	CCATGG	3 cut(s)	902, 1198, 1752
BspACI	CCGC	4 cut(s)	260, 321, 1664, 1970
BspANI	GGCC	8 cut(s)	284, 309, 320, 604, 638, 1310, 1976, 2210
BspCNI	CTCAG	3 cut(s)	547, 1285, 1477
BspFNI	CGCG	3 cut(s)	337, 339, 1775
BspLI	GGNNCC	9 cut(s)	144, 194, 202, 248, 355, 385, 436, 638, 1654
BspPI	GGATC	2 cut(s)	779, 2009
BspT107I	GGYRCC	3 cut(s)	142, 246, 434
BspTNI	GGTCTC	1 cut(s)	1697
BsrDI	GCAATG	2 cut(s)	696, 1326
BsrFI	RCCGGY	6 cut(s)	118, 437, 586, 604, 1939, 1972
BsrI	ACTGG	6 cut(s)	235, 863, 977, 1286, 1520, 2165
BssAI	RCCGGY	6 cut(s)	118, 437, 586, 604, 1939, 1972
BssMI	GATC	4 cut(s)	771, 810, 1059, 2001
BssNI	GRCGYC	1 cut(s)	435
BssSI	CACGAG	1 cut(s)	644
BssT1I	CCWWGG	5 cut(s)	196, 902, 1198, 1379, 1752
Bst2BI	CACGAG	1 cut(s)	644
Bst2UI	CCWGG	3 cut(s)	381, 1467, 1512
Bst4CI	ACNGT	9 cut(s)	142, 445, 469, 687, 1037, 1177, 1762, 2121, 2134
Bst6I	CTCTTC	4 cut(s)	749, 1028, 1199, 1238
BstACI	GRCGYC	1 cut(s)	435
BstAPI	GCANNNNNTGC	2 cut(s)	1169, 2093
BstC8I	GCNNGC	6 cut(s)	311, 439, 606, 898, 1974, 2230
BstDEI	CTNAG	4 cut(s)	534, 1293, 1485, 1896
BstDSI	CCRYGG	3 cut(s)	902, 1198, 1752
BstF5I	GGATG	1 cut(s)	1707
BstFNI	CGCG	3 cut(s)	337, 339, 1775
BstH2I	RGCGCY	1 cut(s)	438
BstHHI	GCGC	2 cut(s)	339, 437
BstKTI	GATC	4 cut(s)	774, 813, 1062, 2004
BstMAI	GTCTC	5 cut(s)	147, 514, 628, 1697, 2056
BstMBI	GATC	4 cut(s)	771, 810, 1059, 2001
BstMCI	CGRYCG	2 cut(s)	150, 2211
BstMWI	GCNNNNNNNGC	9 cut(s)	124, 281, 290, 923, 1169, 1375, 1898, 2093, 2102
BstNI	CCWGG	3 cut(s)	381, 1467, 1512
BstNSI	RCATGY	1 cut(s)	1939
BstPAI	GACNNNNGTC	1 cut(s)	338
BstSCI	CCNGG	5 cut(s)	379, 733, 1465, 1510, 1711
BstSFI	CTRYAG	1 cut(s)	1173
BstSLI	GKGCMC	5 cut(s)	303, 640, 1685, 1829, 2089
BstUI	CGCG	3 cut(s)	337, 339, 1775
BstV1I	GCAGC	8 cut(s)	24, 502, 602, 913, 1147, 1847, 1879, 2219
BstV2I	GAAGAC	2 cut(s)	334, 1038
BstX2I	RGATCY	1 cut(s)	771
BstXI	CCANNNNNNTGG	1 cut(s)	2055
BstYI	RGATCY	1 cut(s)	771
BstZI	CGGCCG	1 cut(s)	2208
BsuRI	GGCC	8 cut(s)	284, 309, 320, 604, 638, 1310, 1976, 2210
BtgI	CCRYGG	3 cut(s)	902, 1198, 1752
BtgZI	GCGATG	1 cut(s)	1151
BtrI	CACGTC	1 cut(s)	406
BtsCI	GGATG	1 cut(s)	1707
BtsI	GCAGTG	4 cut(s)	912, 1167, 1845, 1977
BtsIMutI	CAGTG	7 cut(s)	912, 1167, 1293, 1743, 1758, 1845, 1977
Cac8I	GCNNGC	6 cut(s)	311, 439, 606, 898, 1974, 2230
CaiI	CAGNNNCTG	1 cut(s)	1292
CfoI	GCGC	2 cut(s)	339, 437
Cfr10I	RCCGGY	6 cut(s)	118, 437, 586, 604, 1939, 1972
Cfr13I	GGNCC	9 cut(s)	193, 252, 283, 383, 636, 637, 861, 1109, 1799
CpoI	CGGWCCG	1 cut(s)	252
CseI	GACGC	5 cut(s)	202, 328, 343, 1764, 1781
Csp6I	GTAC	6 cut(s)	247, 574, 1489, 1501, 1722, 2117
CspCI	CAANNNNNGTGG	2 cut(s)	1898, 1933
CspI	CGGWCCG	1 cut(s)	252
CviQI	GTAC	6 cut(s)	247, 574, 1489, 1501, 1722, 2117
DdeI	CTNAG	4 cut(s)	534, 1293, 1485, 1896
DinI	GGCGCC	1 cut(s)	436
DpnI	GATC	4 cut(s)	773, 812, 1061, 2003
DpnII	GATC	4 cut(s)	771, 810, 1059, 2001
DraIII	CACNNNGTG	1 cut(s)	1689
DrdI	GACNNNNNNGTC	2 cut(s)	1778, 1797
DseDI	GACNNNNNNGTC	2 cut(s)	1778, 1797
EaeI	YGGCCR	6 cut(s)	307, 318, 602, 1308, 1974, 2208
EagI	CGGCCG	1 cut(s)	2208
Eam1104I	CTCTTC	4 cut(s)	749, 1028, 1199, 1238
EarI	CTCTTC	4 cut(s)	749, 1028, 1199, 1238
EclXI	CGGCCG	1 cut(s)	2208
Eco130I	CCWWGG	5 cut(s)	196, 902, 1198, 1379, 1752
Eco24I	GRGCYC	2 cut(s)	640, 855
Eco31I	GGTCTC	1 cut(s)	1697
Eco32I	GATATC	1 cut(s)	1517
Eco47I	GGWCC	6 cut(s)	193, 252, 383, 861, 1109, 1799
Eco52I	CGGCCG	1 cut(s)	2208
EcoO109I	RGGNCCY	3 cut(s)	193, 636, 637
EcoRI	GAATTC	1 cut(s)	365
EcoRII	CCWGG	3 cut(s)	379, 1465, 1510
EcoRV	GATATC	1 cut(s)	1517
EcoT14I	CCWWGG	5 cut(s)	196, 902, 1198, 1379, 1752
EcoT38I	GRGCYC	2 cut(s)	640, 855
EgeI	GGCGCC	1 cut(s)	436
EheI	GGCGCC	1 cut(s)	436
ErhI	CCWWGG	5 cut(s)	196, 902, 1198, 1379, 1752
Esp3I	CGTCTC	2 cut(s)	147, 514
FalI	AAGNNNNNCTT	2 cut(s)	1098, 1130
FaqI	GGGAC	3 cut(s)	369, 1803, 1832
FauNDI	CATATG	2 cut(s)	965, 1831
FblI	GTMKAC	1 cut(s)	2157
FokI	GGATG	1 cut(s)	1694
FriOI	GRGCYC	2 cut(s)	640, 855
FspBI	CTAG	7 cut(s)	63, 197, 1263, 1397, 1623, 1856, 1880
GlaI	GCGC	2 cut(s)	338, 436
GsaI	CCCAGC	2 cut(s)	556, 561
HaeII	RGCGCY	1 cut(s)	438
HaeIII	GGCC	8 cut(s)	284, 309, 320, 604, 638, 1310, 1976, 2210
HgaI	GACGC	5 cut(s)	202, 328, 343, 1764, 1781
HhaI	GCGC	2 cut(s)	339, 437
Hin1I	GRCGYC	1 cut(s)	435
Hin6I	GCGC	2 cut(s)	337, 435
HinP1I	GCGC	2 cut(s)	337, 435
HincII	GTYRAC	3 cut(s)	957, 1987, 2158
HindII	GTYRAC	3 cut(s)	957, 1987, 2158
HindIII	AAGCTT	1 cut(s)	1595
HinfI	GANTC	3 cut(s)	958, 1067, 1921
HpaI	GTTAAC	1 cut(s)	1987
HphI	GGTGA	5 cut(s)	133, 406, 1327, 1414, 2230
Hpy188I	TCNGA	6 cut(s)	81, 138, 185, 884, 1015, 1461
Hpy188III	TCNNGA	5 cut(s)	63, 175, 331, 568, 1040
Hpy99I	CGWCG	2 cut(s)	337, 1775
HpyAV	CCTTC	8 cut(s)	68, 171, 190, 397, 712, 1100, 1197, 1403
HpyCH4III	ACNGT	9 cut(s)	142, 445, 469, 687, 1037, 1177, 1762, 2121, 2134
HpyCH4IV	ACGT	3 cut(s)	393, 405, 500
HpyF10VI	GCNNNNNNNGC	9 cut(s)	124, 281, 290, 923, 1169, 1375, 1898, 2093, 2102
HpyF3I	CTNAG	4 cut(s)	534, 1293, 1485, 1896
HpySE526I	ACGT	3 cut(s)	393, 405, 500
Hsp92I	GRCGYC	1 cut(s)	435
HspAI	GCGC	2 cut(s)	337, 435
KasI	GGCGCC	1 cut(s)	434
KpnI	GGTACC	1 cut(s)	250
KroI	GCCGGC	3 cut(s)	437, 604, 1972
KroNI	GCCGGC	3 cut(s)	439, 606, 1974
KspAI	GTTAAC	1 cut(s)	1987
Kzo9I	GATC	4 cut(s)	771, 810, 1059, 2001
LmnI	GCTCC	4 cut(s)	55, 1216, 1876, 1952
Lsp1109I	GCAGC	8 cut(s)	24, 502, 602, 913, 1147, 1847, 1879, 2219
LweI	GCATC	1 cut(s)	2083
MaeI	CTAG	7 cut(s)	63, 197, 1263, 1397, 1623, 1856, 1880
MaeII	ACGT	3 cut(s)	393, 405, 500
MaeIII	GTNAC	4 cut(s)	463, 673, 968, 1601
MalI	GATC	4 cut(s)	773, 812, 1061, 2003
MboI	GATC	4 cut(s)	771, 810, 1059, 2001
MfeI	CAATTG	3 cut(s)	1373, 1431, 1866
MflI	RGATCY	1 cut(s)	771
MhlI	GDGCHC	6 cut(s)	303, 640, 855, 1685, 1829, 2089
MlsI	TGGCCA	1 cut(s)	1310
MluCI	AATT	9 cut(s)	365, 610, 1072, 1373, 1431, 1809, 1843, 1866, 2148
MluI	ACGCGT	1 cut(s)	1773
MluNI	TGGCCA	1 cut(s)	1310
Mly113I	GGCGCC	1 cut(s)	435
MlyI	GAGTC	2 cut(s)	952, 1061
MmeI	TCCRAC	2 cut(s)	1630, 2116
Mox20I	TGGCCA	1 cut(s)	1310
MroNI	GCCGGC	3 cut(s)	437, 604, 1972
MroXI	GAANNNNTTC	1 cut(s)	1847
MscI	TGGCCA	1 cut(s)	1310
MseI	TTAA	4 cut(s)	474, 527, 978, 1986
MslI	CAYNNNNRTG	5 cut(s)	950, 1559, 1738, 1934, 2070
Msp20I	TGGCCA	1 cut(s)	1310
MspA1I	CMGCKG	1 cut(s)	262
MspR9I	CCNGG	5 cut(s)	381, 735, 1467, 1512, 1713
MunI	CAATTG	3 cut(s)	1373, 1431, 1866
Mva1269I	GAATGC	1 cut(s)	2204
MvaI	CCWGG	3 cut(s)	381, 1467, 1512
MvnI	CGCG	3 cut(s)	337, 339, 1775
MwoI	GCNNNNNNNGC	9 cut(s)	124, 281, 290, 923, 1169, 1375, 1898, 2093, 2102
NaeI	GCCGGC	3 cut(s)	439, 606, 1974
NarI	GGCGCC	1 cut(s)	435
NciI	CCSGG	2 cut(s)	735, 1713
NcoI	CCATGG	3 cut(s)	902, 1198, 1752
NdeI	CATATG	2 cut(s)	965, 1831
NdeII	GATC	4 cut(s)	771, 810, 1059, 2001
NgoMIV	GCCGGC	3 cut(s)	437, 604, 1972
NlaIV	GGNNCC	9 cut(s)	144, 194, 202, 248, 355, 385, 436, 638, 1654
NmeAIII	GCCGAG	2 cut(s)	260, 285
NmuCI	GTSAC	3 cut(s)	463, 673, 1601
NspI	RCATGY	1 cut(s)	1939
PctI	GAATGC	1 cut(s)	2204
PdiI	GCCGGC	3 cut(s)	439, 606, 1974
PdmI	GAANNNNTTC	1 cut(s)	1847
PfeI	GAWTC	1 cut(s)	1921
PflMI	CCANNNNNTGG	2 cut(s)	316, 668
PleI	GAGTC	2 cut(s)	952, 1061
PluTI	GGCGCC	1 cut(s)	438
PpsI	GAGTC	2 cut(s)	952, 1061
PpuMI	RGGWCCY	1 cut(s)	193
PshAI	GACNNNNGTC	1 cut(s)	338
Psp5II	RGGWCCY	1 cut(s)	193
Psp6I	CCWGG	3 cut(s)	379, 1465, 1510
PspFI	CCCAGC	2 cut(s)	552, 557
PspGI	CCWGG	3 cut(s)	379, 1465, 1510
PspN4I	GGNNCC	9 cut(s)	144, 194, 202, 248, 355, 385, 436, 638, 1654
PspOMI	GGGCCC	1 cut(s)	636
PspPI	GGNCC	9 cut(s)	193, 252, 283, 383, 636, 637, 861, 1109, 1799
PspPPI	RGGWCCY	1 cut(s)	193
PstNI	CAGNNNCTG	1 cut(s)	1292
PsuI	RGATCY	1 cut(s)	771
RsaI	GTAC	6 cut(s)	248, 575, 1490, 1502, 1723, 2118
RsaNI	GTAC	6 cut(s)	247, 574, 1489, 1501, 1722, 2117
RseI	CAYNNNNRTG	5 cut(s)	950, 1559, 1738, 1934, 2070
Rsr2I	CGGWCCG	1 cut(s)	252
RsrII	CGGWCCG	1 cut(s)	252
SalI	GTCGAC	1 cut(s)	2156
SaqAI	TTAA	4 cut(s)	474, 527, 978, 1986
Sau3AI	GATC	4 cut(s)	771, 810, 1059, 2001
Sau96I	GGNCC	9 cut(s)	193, 252, 283, 383, 636, 637, 861, 1109, 1799
SchI	GAGTC	2 cut(s)	952, 1061
ScrFI	CCNGG	5 cut(s)	381, 735, 1467, 1512, 1713
SduI	GDGCHC	6 cut(s)	303, 640, 855, 1685, 1829, 2089
SfaNI	GCATC	1 cut(s)	2083
SfcI	CTRYAG	1 cut(s)	1173
SfoI	GGCGCC	1 cut(s)	436
SgrAI	CRCCGGYG	1 cut(s)	118
SinI	GGWCC	6 cut(s)	193, 252, 383, 861, 1109, 1799
SmiMI	CAYNNNNRTG	5 cut(s)	950, 1559, 1738, 1934, 2070
Sse9I	AATT	9 cut(s)	365, 610, 1072, 1373, 1431, 1809, 1843, 1866, 2148
SsiI	CCGC	4 cut(s)	260, 321, 1664, 1970
SspDI	GGCGCC	1 cut(s)	434
SspI	AATATT	2 cut(s)	1008, 1087
SspMI	CTAG	7 cut(s)	63, 197, 1263, 1397, 1623, 1856, 1880
StyD4I	CCNGG	5 cut(s)	379, 733, 1465, 1510, 1711
StyI	CCWWGG	5 cut(s)	196, 902, 1198, 1379, 1752
TaaI	ACNGT	9 cut(s)	142, 445, 469, 687, 1037, 1177, 1762, 2121, 2134
TaiI	ACGT	3 cut(s)	396, 408, 503
TaqI	TCGA	4 cut(s)	266, 582, 855, 2157
TaqII	GACCGA	1 cut(s)	269
TasI	AATT	9 cut(s)	365, 610, 1072, 1373, 1431, 1809, 1843, 1866, 2148
TatI	WGTACW	2 cut(s)	1488, 1721
TauI	GCSGC	4 cut(s)	262, 323, 1667, 1972
TfiI	GAWTC	1 cut(s)	1921
Tru1I	TTAA	4 cut(s)	474, 527, 978, 1986
Tru9I	TTAA	4 cut(s)	474, 527, 978, 1986
TscAI	CASTG	7 cut(s)	919, 1174, 1293, 1743, 1765, 1845, 1984
TseFI	GTSAC	3 cut(s)	463, 673, 1601
TseI	GCWGC	8 cut(s)	12, 490, 590, 926, 1160, 1835, 1892, 2232
Tsp45I	GTSAC	3 cut(s)	463, 673, 1601
TspDTI	ATGAA	7 cut(s)	84, 446, 694, 1032, 1172, 1624, 1625
TspGWI	ACGGA	1 cut(s)	1043
TspRI	CASTG	7 cut(s)	919, 1174, 1293, 1743, 1765, 1845, 1984
Van91I	CCANNNNNTGG	2 cut(s)	316, 668
VneI	GTGCAC	1 cut(s)	1681
VpaK11BI	GGWCC	6 cut(s)	193, 252, 383, 861, 1109, 1799
XapI	RAATTY	3 cut(s)	365, 610, 1809
XbaI	TCTAGA	1 cut(s)	62
XceI	RCATGY	1 cut(s)	1939
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1293, 1914
XmaJI	CCTAGG	1 cut(s)	196
XmiI	GTMKAC	1 cut(s)	2157
XmnI	GAANNNNTTC	1 cut(s)	1847
XspI	CTAG	7 cut(s)	63, 197, 1263, 1397, 1623, 1856, 1880

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.