Oligopeptide transporter
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 237 |
| AccB1I | GGYRCC | 1 cut(s) | 237 |
| AccB7I | CCANNNNNTGG | 4 cut(s) | 307, 659, 894, 1848 |
| AccBSI | CCGCTC | 2 cut(s) | 295, 883 |
| AccI | GTMKAC | 1 cut(s) | 438 |
| AccII | CGCG | 4 cut(s) | 200, 284, 330, 1230 |
| AccIII | TCCGGA | 2 cut(s) | 174, 2084 |
| AclWI | GGATC | 3 cut(s) | 143, 1571, 1830 |
| AcoI | YGGCCR | 6 cut(s) | 68, 298, 906, 1027, 1828, 2115 |
| AcsI | RAATTY | 1 cut(s) | 356 |
| AcvI | CACGTG | 1 cut(s) | 397 |
| AfaI | GTAC | 5 cut(s) | 239, 1133, 1481, 1645, 2129 |
| AflIII | ACRYGT | 2 cut(s) | 328, 2149 |
| AgsI | TTSAA | 7 cut(s) | 340, 382, 1189, 1364, 1369, 1465, 1585 |
| AjiI | CACGTC | 1 cut(s) | 1218 |
| AjnI | CCWGG | 6 cut(s) | 525, 724, 758, 1282, 1305, 1501 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 733, 765 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 998, 1030 |
| Alw21I | GWGCWC | 7 cut(s) | 396, 402, 461, 534, 1251, 1950, 2092 |
| Alw26I | GTCTC | 3 cut(s) | 827, 1006, 1191 |
| Alw44I | GTGCAC | 1 cut(s) | 1247 |
| AlwI | GGATC | 3 cut(s) | 143, 1571, 1830 |
| Ama87I | CYCGRG | 2 cut(s) | 370, 2023 |
| Aor13HI | TCCGGA | 2 cut(s) | 174, 2084 |
| ApaI | GGGCCC | 1 cut(s) | 377 |
| ApaLI | GTGCAC | 1 cut(s) | 1247 |
| ApeKI | GCWGC | 6 cut(s) | 505, 702, 814, 1207, 1436, 1655 |
| ApoI | RAATTY | 1 cut(s) | 356 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 677 |
| Asp718I | GGTACC | 1 cut(s) | 237 |
| AspLEI | GCGC | 3 cut(s) | 505, 836, 1103 |
| AspS9I | GGNCC | 6 cut(s) | 289, 373, 374, 546, 852, 1802 |
| AsuC2I | CCSGG | 6 cut(s) | 245, 371, 372, 424, 550, 1755 |
| AsuHPI | GGTGA | 6 cut(s) | 133, 253, 397, 1769, 1927, 1987 |
| AvaI | CYCGRG | 2 cut(s) | 370, 2023 |
| AvaII | GGWCC | 2 cut(s) | 289, 852 |
| BaeGI | GKGCMC | 4 cut(s) | 377, 631, 1251, 1596 |
| BalI | TGGCCA | 2 cut(s) | 1029, 1830 |
| BanI | GGYRCC | 1 cut(s) | 237 |
| BanII | GRGCYC | 5 cut(s) | 196, 377, 579, 881, 2092 |
| BauI | CACGAG | 1 cut(s) | 932 |
| BbrPI | CACGTG | 1 cut(s) | 397 |
| BbsI | GAAGAC | 2 cut(s) | 1584, 1759 |
| Bbv12I | GWGCWC | 7 cut(s) | 396, 402, 461, 534, 1251, 1950, 2092 |
| BbvI | GCAGC | 6 cut(s) | 492, 714, 801, 1219, 1423, 1667 |
| BceAI | ACGGC | 4 cut(s) | 83, 546, 921, 2102 |
| BciT130I | CCWGG | 6 cut(s) | 527, 726, 760, 1284, 1307, 1503 |
| BciVI | GTATCC | 2 cut(s) | 1509, 1535 |
| BclI | TGATCA | 2 cut(s) | 1470, 1759 |
| BcnI | CCSGG | 6 cut(s) | 245, 371, 372, 424, 550, 1755 |
| BcoDI | GTCTC | 3 cut(s) | 827, 1006, 1191 |
| BfaI | CTAG | 5 cut(s) | 6, 803, 1400, 1883, 2093 |
| BfmI | CTRYAG | 1 cut(s) | 1869 |
| BfoI | RGCGCY | 1 cut(s) | 1104 |
| BfuI | GTATCC | 2 cut(s) | 1509, 1535 |
| BisI | GCNGC | 9 cut(s) | 71, 506, 582, 703, 815, 1208, 1437, 1656, 2065 |
| BlpI | GCTNAGC | 1 cut(s) | 1211 |
| BlsI | GCNGC | 9 cut(s) | 72, 507, 583, 704, 816, 1209, 1438, 1657, 2066 |
| Bme18I | GGWCC | 2 cut(s) | 289, 852 |
| BmeT110I | CYCGRG | 2 cut(s) | 370, 2023 |
| BmgBI | CACGTC | 1 cut(s) | 1218 |
| BmgT120I | GGNCC | 6 cut(s) | 289, 373, 374, 546, 852, 1802 |
| BmsI | GCATC | 5 cut(s) | 320, 1072, 1311, 1765, 2086 |
| BpiI | GAAGAC | 2 cut(s) | 1584, 1759 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 239, 271 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1211 |
| BpuMI | CCSGG | 6 cut(s) | 245, 371, 372, 424, 550, 1755 |
| BsaAI | YACGTR | 1 cut(s) | 397 |
| BsaI | GGTCTC | 1 cut(s) | 827 |
| BsaJI | CCNNGG | 8 cut(s) | 370, 423, 525, 893, 1742, 1753, 2022, 2193 |
| BsaWI | WCCGGW | 3 cut(s) | 136, 174, 2084 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1947, 1977 |
| Bse1I | ACTGG | 7 cut(s) | 226, 676, 855, 888, 1030, 1511, 1853 |
| Bse3DI | GCAATG | 3 cut(s) | 687, 1431, 1626 |
| BseAI | TCCGGA | 2 cut(s) | 174, 2084 |
| BseBI | CCWGG | 6 cut(s) | 527, 726, 760, 1284, 1307, 1503 |
| BseDI | CCNNGG | 8 cut(s) | 370, 423, 525, 893, 1742, 1753, 2022, 2193 |
| BseGI | GGATG | 7 cut(s) | 786, 1012, 1224, 1249, 1292, 1302, 2148 |
| BseMI | GCAATG | 3 cut(s) | 687, 1431, 1626 |
| BseMII | CTCAG | 1 cut(s) | 290 |
| BseNI | ACTGG | 7 cut(s) | 226, 676, 855, 888, 1030, 1511, 1853 |
| BseRI | GAGGAG | 1 cut(s) | 18 |
| BseSI | GKGCMC | 4 cut(s) | 377, 631, 1251, 1596 |
| BseX3I | CGGCCG | 1 cut(s) | 68 |
| BseXI | GCAGC | 6 cut(s) | 492, 714, 801, 1219, 1423, 1667 |
| BseYI | CCCAGC | 3 cut(s) | 543, 1862, 2001 |
| Bsh1236I | CGCG | 4 cut(s) | 200, 284, 330, 1230 |
| Bsh1285I | CGRYCG | 3 cut(s) | 71, 114, 165 |
| BshNI | GGYRCC | 1 cut(s) | 237 |
| BsiEI | CGRYCG | 3 cut(s) | 71, 114, 165 |
| BsiHKAI | GWGCWC | 7 cut(s) | 396, 402, 461, 534, 1251, 1950, 2092 |
| BsiHKCI | CYCGRG | 2 cut(s) | 370, 2023 |
| BslFI | GGGAC | 2 cut(s) | 275, 2175 |
| BsmAI | GTCTC | 3 cut(s) | 827, 1006, 1191 |
| BsmFI | GGGAC | 2 cut(s) | 275, 2175 |
| BsmI | GAATGC | 1 cut(s) | 1658 |
| Bso31I | GGTCTC | 1 cut(s) | 827 |
| BsoBI | CYCGRG | 2 cut(s) | 370, 2023 |
| Bsp120I | GGGCCC | 1 cut(s) | 373 |
| Bsp13I | TCCGGA | 2 cut(s) | 174, 2084 |
| Bsp143I | GATC | 9 cut(s) | 111, 148, 267, 279, 1354, 1470, 1563, 1759, 1822 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1211 |
| Bsp19I | CCATGG | 2 cut(s) | 893, 1742 |
| BspCNI | CTCAG | 1 cut(s) | 289 |
| BspEI | TCCGGA | 2 cut(s) | 174, 2084 |
| BspFNI | CGCG | 4 cut(s) | 200, 284, 330, 1230 |
| BspHI | TCATGA | 1 cut(s) | 1260 |
| BspPI | GGATC | 3 cut(s) | 143, 1571, 1830 |
| BspT107I | GGYRCC | 1 cut(s) | 237 |
| BspTNI | GGTCTC | 1 cut(s) | 827 |
| BsrBI | CCGCTC | 2 cut(s) | 295, 883 |
| BsrDI | GCAATG | 3 cut(s) | 687, 1431, 1626 |
| BsrI | ACTGG | 7 cut(s) | 226, 676, 855, 888, 1030, 1511, 1853 |
| BssECI | CCNNGG | 8 cut(s) | 370, 423, 525, 893, 1742, 1753, 2022, 2193 |
| BssMI | GATC | 9 cut(s) | 111, 148, 267, 279, 1354, 1470, 1563, 1759, 1822 |
| BssSI | CACGAG | 1 cut(s) | 932 |
| BssT1I | CCWWGG | 3 cut(s) | 893, 1742, 2193 |
| Bst2BI | CACGAG | 1 cut(s) | 932 |
| Bst2UI | CCWGG | 6 cut(s) | 527, 726, 760, 1284, 1307, 1503 |
| Bst4CI | ACNGT | 5 cut(s) | 133, 166, 463, 1739, 1963 |
| Bst6I | CTCTTC | 3 cut(s) | 641, 740, 1422 |
| BstBAI | YACGTR | 1 cut(s) | 397 |
| BstC8I | GCNNGC | 8 cut(s) | 202, 430, 579, 881, 885, 1153, 1389, 1893 |
| BstDEI | CTNAG | 4 cut(s) | 276, 1211, 1858, 1951 |
| BstDSI | CCRYGG | 2 cut(s) | 893, 1742 |
| BstEII | GGTNACC | 1 cut(s) | 139 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 608 |
| BstF5I | GGATG | 7 cut(s) | 786, 1012, 1224, 1249, 1292, 1302, 2148 |
| BstFNI | CGCG | 4 cut(s) | 200, 284, 330, 1230 |
| BstH2I | RGCGCY | 1 cut(s) | 1104 |
| BstHHI | GCGC | 3 cut(s) | 505, 836, 1103 |
| BstKTI | GATC | 9 cut(s) | 114, 151, 270, 282, 1357, 1473, 1566, 1762, 1825 |
| BstMAI | GTCTC | 3 cut(s) | 827, 1006, 1191 |
| BstMBI | GATC | 9 cut(s) | 111, 148, 267, 279, 1354, 1470, 1563, 1759, 1822 |
| BstMCI | CGRYCG | 3 cut(s) | 71, 114, 165 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 76, 281, 1255, 1901, 2061, 2096, 2105, 2114 |
| BstNI | CCWGG | 6 cut(s) | 527, 726, 760, 1284, 1307, 1503 |
| BstNSI | RCATGY | 3 cut(s) | 1341, 1972, 2153 |
| BstPI | GGTNACC | 1 cut(s) | 139 |
| BstSFI | CTRYAG | 1 cut(s) | 1869 |
| BstSLI | GKGCMC | 4 cut(s) | 377, 631, 1251, 1596 |
| BstUI | CGCG | 4 cut(s) | 200, 284, 330, 1230 |
| BstV1I | GCAGC | 6 cut(s) | 492, 714, 801, 1219, 1423, 1667 |
| BstV2I | GAAGAC | 2 cut(s) | 1584, 1759 |
| BstX2I | RGATCY | 1 cut(s) | 1822 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1290 |
| BstYI | RGATCY | 1 cut(s) | 1822 |
| BstZI | CGGCCG | 1 cut(s) | 68 |
| BsuI | GTATCC | 2 cut(s) | 1509, 1535 |
| BtgI | CCRYGG | 2 cut(s) | 893, 1742 |
| BtgZI | GCGATG | 1 cut(s) | 297 |
| BtrI | CACGTC | 1 cut(s) | 1218 |
| BtsCI | GGATG | 7 cut(s) | 786, 1012, 1224, 1249, 1292, 1302, 2148 |
| BtsI | GCAGTG | 1 cut(s) | 629 |
| BtsIMutI | CAGTG | 2 cut(s) | 459, 629 |
| Cac8I | GCNNGC | 8 cut(s) | 202, 430, 579, 881, 885, 1153, 1389, 1893 |
| CciI | TCATGA | 1 cut(s) | 1260 |
| CfoI | GCGC | 3 cut(s) | 505, 836, 1103 |
| Cfr13I | GGNCC | 6 cut(s) | 289, 373, 374, 546, 852, 1802 |
| Cfr9I | CCCGGG | 1 cut(s) | 370 |
| CseI | GACGC | 1 cut(s) | 193 |
| Csp6I | GTAC | 5 cut(s) | 238, 1132, 1480, 1644, 2128 |
| CviQI | GTAC | 5 cut(s) | 238, 1132, 1480, 1644, 2128 |
| DdeI | CTNAG | 4 cut(s) | 276, 1211, 1858, 1951 |
| DpnI | GATC | 9 cut(s) | 113, 150, 269, 281, 1356, 1472, 1565, 1761, 1824 |
| DpnII | GATC | 9 cut(s) | 111, 148, 267, 279, 1354, 1470, 1563, 1759, 1822 |
| DraI | TTTAAA | 1 cut(s) | 1531 |
| EaeI | YGGCCR | 6 cut(s) | 68, 298, 906, 1027, 1828, 2115 |
| EagI | CGGCCG | 1 cut(s) | 68 |
| Eam1104I | CTCTTC | 3 cut(s) | 641, 740, 1422 |
| EarI | CTCTTC | 3 cut(s) | 641, 740, 1422 |
| EciI | GGCGGA | 2 cut(s) | 548, 1058 |
| Ecl136II | GAGCTC | 1 cut(s) | 2090 |
| EclXI | CGGCCG | 1 cut(s) | 68 |
| Eco130I | CCWWGG | 3 cut(s) | 893, 1742, 2193 |
| Eco147I | AGGCCT | 1 cut(s) | 1904 |
| Eco24I | GRGCYC | 5 cut(s) | 196, 377, 579, 881, 2092 |
| Eco31I | GGTCTC | 1 cut(s) | 827 |
| Eco32I | GATATC | 1 cut(s) | 1508 |
| Eco47I | GGWCC | 2 cut(s) | 289, 852 |
| Eco52I | CGGCCG | 1 cut(s) | 68 |
| Eco53kI | GAGCTC | 1 cut(s) | 2090 |
| Eco72I | CACGTG | 1 cut(s) | 397 |
| Eco88I | CYCGRG | 2 cut(s) | 370, 2023 |
| Eco91I | GGTNACC | 1 cut(s) | 139 |
| EcoICRI | GAGCTC | 1 cut(s) | 2090 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 608 |
| EcoO109I | RGGNCCY | 1 cut(s) | 374 |
| EcoO65I | GGTNACC | 1 cut(s) | 139 |
| EcoRI | GAATTC | 1 cut(s) | 356 |
| EcoRII | CCWGG | 6 cut(s) | 525, 724, 758, 1282, 1305, 1501 |
| EcoRV | GATATC | 1 cut(s) | 1508 |
| EcoT14I | CCWWGG | 3 cut(s) | 893, 1742, 2193 |
| EcoT22I | ATGCAT | 1 cut(s) | 1087 |
| EcoT38I | GRGCYC | 5 cut(s) | 196, 377, 579, 881, 2092 |
| ErhI | CCWWGG | 3 cut(s) | 893, 1742, 2193 |
| FaqI | GGGAC | 2 cut(s) | 275, 2175 |
| FauI | CCCGC | 3 cut(s) | 300, 586, 888 |
| FauNDI | CATATG | 2 cut(s) | 1087, 1709 |
| FbaI | TGATCA | 2 cut(s) | 1470, 1759 |
| FblI | GTMKAC | 1 cut(s) | 438 |
| Fnu4HI | GCNGC | 9 cut(s) | 71, 506, 582, 703, 815, 1208, 1437, 1656, 2065 |
| FokI | GGATG | 7 cut(s) | 773, 1019, 1211, 1256, 1289, 1299, 2155 |
| FriOI | GRGCYC | 5 cut(s) | 196, 377, 579, 881, 2092 |
| Fsp4HI | GCNGC | 9 cut(s) | 71, 506, 582, 703, 815, 1208, 1437, 1656, 2065 |
| FspBI | CTAG | 5 cut(s) | 6, 803, 1400, 1883, 2093 |
| GlaI | GCGC | 3 cut(s) | 504, 835, 1102 |
| GluI | GCNGC | 9 cut(s) | 71, 506, 582, 703, 815, 1208, 1437, 1656, 2065 |
| GsaI | CCCAGC | 3 cut(s) | 547, 1866, 2005 |
| HaeII | RGCGCY | 1 cut(s) | 1104 |
| HgaI | GACGC | 1 cut(s) | 193 |
| HhaI | GCGC | 3 cut(s) | 505, 836, 1103 |
| Hin6I | GCGC | 3 cut(s) | 503, 834, 1101 |
| HinP1I | GCGC | 3 cut(s) | 503, 834, 1101 |
| HincII | GTYRAC | 3 cut(s) | 747, 1966, 1990 |
| HindII | GTYRAC | 3 cut(s) | 747, 1966, 1990 |
| HindIII | AAGCTT | 2 cut(s) | 467, 1586 |
| HinfI | GANTC | 5 cut(s) | 537, 1428, 1606, 1812, 2016 |
| HpaI | GTTAAC | 1 cut(s) | 1966 |
| HphI | GGTGA | 6 cut(s) | 133, 253, 397, 1769, 1927, 1987 |
| Hpy166II | GTNNAC | 7 cut(s) | 439, 747, 1017, 1249, 1335, 1966, 1990 |
| Hpy188I | TCNGA | 5 cut(s) | 111, 279, 536, 1006, 1452 |
| Hpy188III | TCNNGA | 6 cut(s) | 160, 175, 1261, 1574, 2085, 2093 |
| Hpy8I | GTNNAC | 7 cut(s) | 439, 747, 1017, 1249, 1335, 1966, 1990 |
| Hpy99I | CGWCG | 2 cut(s) | 101, 149 |
| HpyAV | CCTTC | 4 cut(s) | 388, 731, 1129, 1915 |
| HpyCH4III | ACNGT | 5 cut(s) | 133, 166, 463, 1739, 1963 |
| HpyCH4IV | ACGT | 5 cut(s) | 396, 435, 717, 1217, 1521 |
| HpyCH4V | TGCA | 8 cut(s) | 634, 702, 817, 1085, 1249, 1302, 1679, 1895 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 76, 281, 1255, 1901, 2061, 2096, 2105, 2114 |
| HpyF3I | CTNAG | 4 cut(s) | 276, 1211, 1858, 1951 |
| HpySE526I | ACGT | 5 cut(s) | 396, 435, 717, 1217, 1521 |
| HspAI | GCGC | 3 cut(s) | 503, 834, 1101 |
| Kpn2I | TCCGGA | 2 cut(s) | 174, 2084 |
| KpnI | GGTACC | 1 cut(s) | 241 |
| Ksp22I | TGATCA | 2 cut(s) | 1470, 1759 |
| KspAI | GTTAAC | 1 cut(s) | 1966 |
| Kzo9I | GATC | 9 cut(s) | 111, 148, 267, 279, 1354, 1470, 1563, 1759, 1822 |
| LmnI | GCTCC | 9 cut(s) | 62, 191, 247, 391, 876, 1879, 1955, 2061, 2087 |
| Lsp1109I | GCAGC | 6 cut(s) | 492, 714, 801, 1219, 1423, 1667 |
| LweI | GCATC | 5 cut(s) | 320, 1072, 1311, 1765, 2086 |
| MaeI | CTAG | 5 cut(s) | 6, 803, 1400, 1883, 2093 |
| MaeII | ACGT | 5 cut(s) | 396, 435, 717, 1217, 1521 |
| MaeIII | GTNAC | 4 cut(s) | 139, 166, 563, 1722 |
| MalI | GATC | 9 cut(s) | 113, 150, 269, 281, 1356, 1472, 1565, 1761, 1824 |
| MbiI | CCGCTC | 2 cut(s) | 295, 883 |
| MboI | GATC | 9 cut(s) | 111, 148, 267, 279, 1354, 1470, 1563, 1759, 1822 |
| MfeI | CAATTG | 1 cut(s) | 1364 |
| MflI | RGATCY | 1 cut(s) | 1822 |
| MlsI | TGGCCA | 2 cut(s) | 1029, 1830 |
| MluCI | AATT | 5 cut(s) | 356, 970, 1144, 1364, 2121 |
| MluI | ACGCGT | 1 cut(s) | 328 |
| MluNI | TGGCCA | 2 cut(s) | 1029, 1830 |
| MlyI | GAGTC | 1 cut(s) | 1437 |
| Mox20I | TGGCCA | 2 cut(s) | 1029, 1830 |
| Mph1103I | ATGCAT | 1 cut(s) | 1087 |
| MroI | TCCGGA | 2 cut(s) | 174, 2084 |
| MroXI | GAANNNNTTC | 1 cut(s) | 677 |
| MscI | TGGCCA | 2 cut(s) | 1029, 1830 |
| MseI | TTAA | 4 cut(s) | 1530, 1926, 1965, 2160 |
| MslI | CAYNNNNRTG | 4 cut(s) | 1307, 1550, 1943, 2073 |
| Msp20I | TGGCCA | 2 cut(s) | 1029, 1830 |
| MspA1I | CMGCKG | 1 cut(s) | 2001 |
| MunI | CAATTG | 1 cut(s) | 1364 |
| Mva1269I | GAATGC | 1 cut(s) | 1658 |
| MvaI | CCWGG | 6 cut(s) | 527, 726, 760, 1284, 1307, 1503 |
| MvnI | CGCG | 4 cut(s) | 200, 284, 330, 1230 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 76, 281, 1255, 1901, 2061, 2096, 2105, 2114 |
| NciI | CCSGG | 6 cut(s) | 245, 371, 372, 424, 550, 1755 |
| NcoI | CCATGG | 2 cut(s) | 893, 1742 |
| NdeI | CATATG | 2 cut(s) | 1087, 1709 |
| NdeII | GATC | 9 cut(s) | 111, 148, 267, 279, 1354, 1470, 1563, 1759, 1822 |
| NmeAIII | GCCGAG | 3 cut(s) | 251, 276, 804 |
| NmuCI | GTSAC | 2 cut(s) | 139, 166 |
| NsiI | ATGCAT | 1 cut(s) | 1087 |
| NspI | RCATGY | 3 cut(s) | 1341, 1972, 2153 |
| PagI | TCATGA | 1 cut(s) | 1260 |
| PceI | AGGCCT | 1 cut(s) | 1904 |
| PciI | ACATGT | 1 cut(s) | 2149 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 320 |
| PctI | GAATGC | 1 cut(s) | 1658 |
| PdmI | GAANNNNTTC | 1 cut(s) | 677 |
| PfeI | GAWTC | 4 cut(s) | 537, 1606, 1812, 2016 |
| PflMI | CCANNNNNTGG | 4 cut(s) | 307, 659, 894, 1848 |
| PfoI | TCCNGGA | 3 cut(s) | 758, 1282, 1501 |
| PkrI | GCNGC | 9 cut(s) | 72, 507, 583, 704, 816, 1209, 1438, 1657, 2066 |
| Ple19I | CGATCG | 1 cut(s) | 114 |
| PleI | GAGTC | 1 cut(s) | 1436 |
| PmaCI | CACGTG | 1 cut(s) | 397 |
| PmlI | CACGTG | 1 cut(s) | 397 |
| PpsI | GAGTC | 1 cut(s) | 1436 |
| Ppu21I | YACGTR | 1 cut(s) | 397 |
| PscI | ACATGT | 1 cut(s) | 2149 |
| Psp124BI | GAGCTC | 1 cut(s) | 2092 |
| Psp6I | CCWGG | 6 cut(s) | 525, 724, 758, 1282, 1305, 1501 |
| PspCI | CACGTG | 1 cut(s) | 397 |
| PspEI | GGTNACC | 1 cut(s) | 139 |
| PspFI | CCCAGC | 3 cut(s) | 543, 1862, 2001 |
| PspGI | CCWGG | 6 cut(s) | 525, 724, 758, 1282, 1305, 1501 |
| PspOMI | GGGCCC | 1 cut(s) | 373 |
| PspPI | GGNCC | 6 cut(s) | 289, 373, 374, 546, 852, 1802 |
| PsuI | RGATCY | 1 cut(s) | 1822 |
| PvuI | CGATCG | 1 cut(s) | 114 |
| PvuII | CAGCTG | 1 cut(s) | 2001 |
| RsaI | GTAC | 5 cut(s) | 239, 1133, 1481, 1645, 2129 |
| RsaNI | GTAC | 5 cut(s) | 238, 1132, 1480, 1644, 2128 |
| RseI | CAYNNNNRTG | 4 cut(s) | 1307, 1550, 1943, 2073 |
| SacI | GAGCTC | 1 cut(s) | 2092 |
| SaqAI | TTAA | 4 cut(s) | 1530, 1926, 1965, 2160 |
| SatI | GCNGC | 9 cut(s) | 71, 506, 582, 703, 815, 1208, 1437, 1656, 2065 |
| Sau3AI | GATC | 9 cut(s) | 111, 148, 267, 279, 1354, 1470, 1563, 1759, 1822 |
| Sau96I | GGNCC | 6 cut(s) | 289, 373, 374, 546, 852, 1802 |
| SchI | GAGTC | 1 cut(s) | 1437 |
| SfaNI | GCATC | 5 cut(s) | 320, 1072, 1311, 1765, 2086 |
| SfcI | CTRYAG | 1 cut(s) | 1869 |
| SinI | GGWCC | 2 cut(s) | 289, 852 |
| SmaI | CCCGGG | 1 cut(s) | 372 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 1307, 1550, 1943, 2073 |
| Sse9I | AATT | 5 cut(s) | 356, 970, 1144, 1364, 2121 |
| SseBI | AGGCCT | 1 cut(s) | 1904 |
| SspMI | CTAG | 5 cut(s) | 6, 803, 1400, 1883, 2093 |
| SstI | GAGCTC | 1 cut(s) | 2092 |
| StuI | AGGCCT | 1 cut(s) | 1904 |
| StyI | CCWWGG | 3 cut(s) | 893, 1742, 2193 |
| TaaI | ACNGT | 5 cut(s) | 133, 166, 463, 1739, 1963 |
| TaiI | ACGT | 5 cut(s) | 399, 438, 720, 1220, 1524 |
| TaqI | TCGA | 3 cut(s) | 114, 266, 1807 |
| TaqII | GACCGA | 1 cut(s) | 65 |
| TasI | AATT | 5 cut(s) | 356, 970, 1144, 1364, 2121 |
| TatI | WGTACW | 3 cut(s) | 1131, 1479, 2127 |
| TauI | GCSGC | 3 cut(s) | 73, 584, 2067 |
| TfiI | GAWTC | 4 cut(s) | 537, 1606, 1812, 2016 |
| Tru1I | TTAA | 4 cut(s) | 1530, 1926, 1965, 2160 |
| Tru9I | TTAA | 4 cut(s) | 1530, 1926, 1965, 2160 |
| TscAI | CASTG | 2 cut(s) | 466, 636 |
| TseFI | GTSAC | 2 cut(s) | 139, 166 |
| TseI | GCWGC | 6 cut(s) | 505, 702, 814, 1207, 1436, 1655 |
| Tsp45I | GTSAC | 2 cut(s) | 139, 166 |
| TspDTI | ATGAA | 9 cut(s) | 204, 437, 1163, 1285, 1568, 1615, 1616, 1706, 2101 |
| TspMI | CCCGGG | 1 cut(s) | 370 |
| TspRI | CASTG | 2 cut(s) | 466, 636 |
| Van91I | CCANNNNNTGG | 4 cut(s) | 307, 659, 894, 1848 |
| VneI | GTGCAC | 1 cut(s) | 1247 |
| VpaK11BI | GGWCC | 2 cut(s) | 289, 852 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 608 |
| XapI | RAATTY | 1 cut(s) | 356 |
| XbaI | TCTAGA | 1 cut(s) | 2092 |
| XceI | RCATGY | 3 cut(s) | 1341, 1972, 2153 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1917 |
| XmaI | CCCGGG | 1 cut(s) | 370 |
| XmiI | GTMKAC | 1 cut(s) | 438 |
| XmnI | GAANNNNTTC | 1 cut(s) | 677 |
| XspI | CTAG | 5 cut(s) | 6, 803, 1400, 1883, 2093 |
| Zsp2I | ATGCAT | 1 cut(s) | 1087 |