Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0001550

Physical Location & Seq

Genomic Coordinates Forward (+)

11162427 .. 11166298

Gene Structure 3872 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG130500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2235 bp

ATGACTATTGCACCCCAAATCACATCCCCTCTTCTTCAGAACAAGAACAAGAACTATGCTTCGGCTTCATCTCCGGCGCCGGAGGAAAATTCCCCGATCGAGCAAGTCGCCCTCACCGTTCCGGTCACCGACGACCCTTCCCTCCCGGCCGTCACGTTCCGAACATGGACGCTCGGATCCCTCGCGTGTGTTCTGCTCTCCTTCCTCAACCAATTCTTCTGGTACCGGAGAGAGCCTCTCTCCCTGACCTCGATCTCCGCGCAGATCGCGGTGGTCCCGCTCGGCCACCTGATGGCCTCCGTCCTCACCGACCGGGTCTTCTTCCAGGGGCGGAAATGGGAATTCACCCTCAACCCGGGGCCGTTCAACGTCAAGGAGCACGTGCTCATCACAATCTTCGCCAACTCCGGCGCCGGCAACGTCTACGCGATCCACATAGTGAGCACCATCAAGGTCTTTTACAAGAAGAACATGTCGTTTTGGGTGGCGCTGCTCGTCGTTTTGACCACTCAGGTGTTGGGGTTCGGCTGGGCCGGGCTTTTCCGCCGGTACTTGGTCCAGCCCGCCGCCATGTGGTGGCCTCATAATCTCGTCCAGGTTTCGCTCTTCAGAGCATTGCATGAGAAGGAGGAGAGGCCAAGAGGTGGATTGACAAGGAATCAGTTCTTCCTCATTGCTTTCACTTGCAGCTTTGCTTATTATGTTCTTCCGGGCTACTTATTCCCAATGTTATCTTCCCTTTCCTGGGTCTGCTGGATCTTCCCTGCTTCAGTTCTAGCCCATCAGCTAGGGTCAGGACTGCATGGTCTTGGGATCGGTGCTATCGGTCTCGATTGGTCCAGCATTTCCTCTTACCTTGGAAGCCCACTTGCCAGTCCATGGTTTGCTACTGCTAATGTTGCTGCTGGTTTTGCCCTTGTGATGTATGTCATTACTCCTGTGGCTTATTGGCTCAATGTGTATAAAGCAAAAACCTTCCCCATATTCTCGGATGGATTGTTCACGTCTACCGGCCAAAGCTACAACATTTCAGCTATAATAGACCCCAACTTCCGGCTTGACATTGAAGCATACGAGCGAGAGGGTCCTCTCCATATCAGTACCTTTTTTGCTATCAACTATGGTGTCAATTTTGCCTGCCTTACTGCCACTGTTGTTCATGTTCTCCTCTTCAATGGGAGAGACATCTGGGAGCTAAGCAAGTCTGCCTTCCAAGAGAAGAAGACAGATGTGCACACAAAGCTCATGAGAAGATATAAGCAAGTCCCTGGATGGTGGTTCGTATGTATCCTTGTGGCTAACATAGCCGCGACCATATTTACATGCCATTATTACAACGACCAATTGCAATTGCAATGGTGGGGGGTCTTGCTTGCTTGTGGTCTAGCCTTGTTTTTCACTCTACCTGTTGGAGTCATTTATGCCACAACCAATCAGATGCCAACTTTGAATGTGATCACAGAGTACATAATTGGGTATCTGTATCCGGGATATCCAGCTGCTAACATATTATTCAAAGTATATGGACACATAAGCATGAAACAAGGAATCAATTTTCTTGAAGACTTCAAGCTTGGACACTACATGAAGATTGCTCCTCGAGCAATGTTCATGGCACAGGTAGTTGGTACTATCATAGCAGCACTTGTGCATTTGGGAACTGCATGGTGGCTTATGAGCACAATCCCTGACATATGCGACAGGGCGTTACTACCAGCAGAGAGCCCATGGACTTGCCCCGGTGACCATGTCTTCTACGATGCTTCCGTTATCTGGGGCCTTGTCGGGCCTCGCAGAATCTTTGGGGACCTTGGCTACTATTCGGCTATCAACTGGTTTTTCTTAGCTGGGGCTATAGCTCCTGCCCTTGTTTGGCTTGCACACAAGACCTTCCCAACCAAACAATGGATTAGACTTATTACAATGCCTGTGCTCTTAGGGACAGTAGTCAACATGCCTCCAGCTACTGCTGTGAATTTCACTAGCTGGATCCTCATTGGATTCGCCTCAGGCTTTGTTGCTTACAGGTACTACCGCGGCTGGTGGAGCCGTCATAACTATGTGCTATCTGGAGCTCTGGATGCTGGATTAGCCTTTATGGCGGTAATTTTGTACTTGTGTCTAGGGATGCAACATGTCCACTTAAAATGGTGGGGAAGTACGCCGGATGGTTGCCCGTTGGCTTCTTGCTCAACGGAGCCAGGTGTTCTGATTAAGGGCTGTCCATTGATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006857 GO:0008150 GO:0015833 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0031226 GO:0035672 GO:0035673 GO:0042886 GO:0042887 GO:0044425 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OPT

Protein Analysis

744

Amino Acids

83.13

Weight (kDa)

8.91

Isoelectric Point (pI)

43.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
OPT	PF03169	51 - 707	1.5e-170	OPT oligopeptide transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001550)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G10770 AT4G10770
fragaria_vesca	FvH4_1g11690 FvH4_1g11690 FvH4_1g11690 FvH4_1g11690 FvH4_1g11690 FvH4_5g11060 FvH4_5g11060 FvH4_5g11060 FvH4_5g11060 FvH4_5g11060
malus_domestica	MD02G1129900.v1.1 MD06G1116800.v1.1 MD14G1124200.v1.1
prunus_persica	Prupe.5G128100_v2.0.a1 Prupe.5G128100_v2.0.a1 Prupe.5G128100_v2.0.a1 Prupe.5G128100_v2.0.a1 Prupe.7G169800_v2.0.a1 Prupe.7G169800_v2.0.a1 Prupe.7G169800_v2.0.a1
pyrus_communis	pycom02g10180 pycom06g10890 pycom14g11000
rosa_chinensis	RchiOBHm_Chr2g0099261 RchiOBHm_Chr7g0186741
rosa_laevigata	RLG00000004820 RLG00000016866
rosa_multiflora	Rmu_co8201022.1_g000001 Rmu_co8437885.1_g000001 Rmu_co8448977.1_g000001 Rmu_sc0009734.1_g000005
rosa_roxburghii	Rroxscaffold_2G00143270 Rroxscaffold_3G00267870
rosa_rugosa	Rorug02G0078300 Rorug02G0078300 Rorug02G0078300 Rorug06G0476200 Rorug06G0476300
rosa_samantha	Rh2AG127500 Rh2BG130500 Rh2CG131700 Rh2DG132100 Rh7AG064300 Rh7BG080800 Rh7CG083200 Rh7DG084100
rosa_wichuraiana	Rw2G009840 Rw7G007210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	804
Acc65I	GGTACC	1 cut(s)	222
AccB1I	GGYRCC	3 cut(s)	76, 222, 410
AccB7I	CCANNNNNTGG	5 cut(s)	292, 576, 644, 879, 1905
AccBSI	CCGCTC	1 cut(s)	280
AccI	GTMKAC	2 cut(s)	423, 1007
AccII	CGCG	6 cut(s)	185, 260, 269, 428, 1310, 2037
AclWI	GGATC	7 cut(s)	171, 184, 424, 764, 821, 1984, 1997
AcoI	YGGCCR	3 cut(s)	147, 283, 1012
AcsI	RAATTY	3 cut(s)	88, 341, 1975
AcuI	CTGAAG	3 cut(s)	20, 592, 753
AcvI	CACGTG	1 cut(s)	382
AcyI	GRCGYC	2 cut(s)	77, 411
AdeI	CACNNNGTG	1 cut(s)	439
AfaI	GTAC	8 cut(s)	224, 551, 1102, 1466, 1630, 2030, 2114, 2161
AflIII	ACRYGT	2 cut(s)	471, 2134
AgsI	TTSAA	7 cut(s)	367, 1067, 1174, 1450, 1516, 1562, 1570
AjiI	CACGTC	1 cut(s)	1005
AjnI	CCWGG	5 cut(s)	324, 594, 743, 1267, 2200
AjuI	GAANNNNNNNTTGG	2 cut(s)	718, 750
AleI	CACNNNNGTG	1 cut(s)	512
AloI	GAACNNNNNNTCC	2 cut(s)	983, 1015
Alw21I	GWGCWC	7 cut(s)	381, 387, 446, 1236, 1682, 1935, 2077
Alw26I	GTCTC	2 cut(s)	833, 1176
Alw44I	GTGCAC	1 cut(s)	1232
AlwI	GGATC	7 cut(s)	171, 184, 424, 764, 821, 1984, 1997
AlwNI	CAGNNNCTG	1 cut(s)	1967
Ama87I	CYCGRG	2 cut(s)	355, 1599
ApaLI	GTGCAC	1 cut(s)	1232
ApeKI	GCWGC	5 cut(s)	490, 687, 902, 1499, 1640
ApoI	RAATTY	3 cut(s)	88, 341, 1975
Asp700I	GAANNNNTTC	1 cut(s)	662
Asp718I	GGTACC	1 cut(s)	222
AspLEI	GCGC	4 cut(s)	79, 262, 413, 490
AspS9I	GGNCC	9 cut(s)	274, 359, 531, 556, 837, 1085, 1777, 1787, 1807
AsuC2I	CCSGG	8 cut(s)	146, 314, 356, 357, 535, 711, 1488, 1740
AsuHPI	GGTGA	5 cut(s)	106, 118, 298, 337, 1754
AvaI	CYCGRG	2 cut(s)	355, 1599
AvaII	GGWCC	5 cut(s)	274, 556, 837, 1085, 1807
AxyI	CCTNAGG	1 cut(s)	2008
BaeGI	GKGCMC	1 cut(s)	1236
BamHI	GGATCC	2 cut(s)	176, 1989
BanI	GGYRCC	3 cut(s)	76, 222, 410
BanII	GRGCYC	2 cut(s)	1727, 2077
BbrPI	CACGTG	1 cut(s)	382
BbsI	GAAGAC	4 cut(s)	310, 1229, 1569, 1744
Bbv12I	GWGCWC	7 cut(s)	381, 387, 446, 1236, 1682, 1935, 2077
BbvI	GCAGC	5 cut(s)	477, 699, 889, 1486, 1652
BccI	CCATC	6 cut(s)	286, 455, 789, 986, 1266, 2162
BceAI	ACGGC	3 cut(s)	134, 346, 2034
BciT130I	CCWGG	5 cut(s)	326, 596, 745, 1269, 2202
BciVI	GTATCC	2 cut(s)	1298, 1494
BclI	TGATCA	1 cut(s)	1455
BcnI	CCSGG	8 cut(s)	146, 314, 356, 357, 535, 711, 1488, 1740
BcoDI	GTCTC	2 cut(s)	833, 1176
BfaI	CTAG	5 cut(s)	776, 788, 1385, 1983, 2123
BfmI	CTRYAG	1 cut(s)	1854
BfoI	RGCGCY	3 cut(s)	80, 414, 491
BfuI	GTATCC	2 cut(s)	1298, 1494
BglI	GCCNNNNNGGC	1 cut(s)	2099
BisI	GCNGC	8 cut(s)	491, 567, 688, 903, 1308, 1500, 1641, 2038
BlpI	GCTNAGC	1 cut(s)	1196
BlsI	GCNGC	8 cut(s)	492, 568, 689, 904, 1309, 1501, 1642, 2039
Bme18I	GGWCC	5 cut(s)	274, 556, 837, 1085, 1807
BmeT110I	CYCGRG	2 cut(s)	355, 1599
BmgBI	CACGTC	1 cut(s)	1005
BmgT120I	GGNCC	9 cut(s)	274, 359, 531, 556, 837, 1085, 1777, 1787, 1807
BmsI	GCATC	4 cut(s)	1428, 1750, 2071, 2118
BoxI	GACNNNNGTC	1 cut(s)	1946
BpiI	GAAGAC	4 cut(s)	310, 1229, 1569, 1744
BplI	GAGNNNNNCTC	6 cut(s)	220, 252, 222, 254, 224, 256
BpmI	CTGGAG	2 cut(s)	1944, 2091
Bpu1102I	GCTNAGC	1 cut(s)	1196
BpuMI	CCSGG	8 cut(s)	146, 314, 356, 357, 535, 711, 1488, 1740
BsaAI	YACGTR	1 cut(s)	382
BsaHI	GRCGYC	2 cut(s)	77, 411
BsaI	GGTCTC	1 cut(s)	833
BsaWI	WCCGGW	2 cut(s)	121, 225
Bse118I	RCCGGY	3 cut(s)	413, 546, 1010
Bse1I	ACTGG	2 cut(s)	873, 1838
Bse21I	CCTNAGG	1 cut(s)	2008
Bse3DI	GCAATG	4 cut(s)	614, 672, 1361, 1611
BseBI	CCWGG	5 cut(s)	326, 596, 745, 1269, 2202
BseGI	GGATG	6 cut(s)	23, 997, 1277, 2086, 2133, 2173
BseMI	GCAATG	4 cut(s)	614, 672, 1361, 1611
BseMII	CTCAG	2 cut(s)	524, 2022
BseNI	ACTGG	2 cut(s)	873, 1838
BseRI	GAGGAG	3 cut(s)	644, 1157, 1587
BseSI	GKGCMC	1 cut(s)	1236
BseX3I	CGGCCG	1 cut(s)	147
BseXI	GCAGC	5 cut(s)	477, 699, 889, 1486, 1652
BseYI	CCCAGC	2 cut(s)	528, 1847
Bsh1236I	CGCG	6 cut(s)	185, 260, 269, 428, 1310, 2037
Bsh1285I	CGRYCG	3 cut(s)	99, 150, 313
BshNI	GGYRCC	3 cut(s)	76, 222, 410
BsiEI	CGRYCG	3 cut(s)	99, 150, 313
BsiHKAI	GWGCWC	7 cut(s)	381, 387, 446, 1236, 1682, 1935, 2077
BsiHKCI	CYCGRG	2 cut(s)	355, 1599
BslFI	GGGAC	4 cut(s)	260, 1250, 1820, 1954
BsmAI	GTCTC	2 cut(s)	833, 1176
BsmFI	GGGAC	4 cut(s)	260, 1250, 1820, 1954
Bso31I	GGTCTC	1 cut(s)	833
BsoBI	CYCGRG	2 cut(s)	355, 1599
Bsp1286I	GDGCHC	8 cut(s)	381, 387, 446, 1236, 1682, 1727, 1935, 2077
Bsp143I	GATC	9 cut(s)	96, 176, 252, 264, 429, 756, 813, 1455, 1989
Bsp1720I	GCTNAGC	1 cut(s)	1196
Bsp19I	CCATGG	2 cut(s)	878, 1727
BspCNI	CTCAG	2 cut(s)	523, 2021
BspFNI	CGCG	6 cut(s)	185, 260, 269, 428, 1310, 2037
BspHI	TCATGA	1 cut(s)	1245
BspPI	GGATC	7 cut(s)	171, 184, 424, 764, 821, 1984, 1997
BspQI	GCTCTTC	1 cut(s)	611
BspT107I	GGYRCC	3 cut(s)	76, 222, 410
BspTNI	GGTCTC	1 cut(s)	833
BsrBI	CCGCTC	1 cut(s)	280
BsrDI	GCAATG	4 cut(s)	614, 672, 1361, 1611
BsrFI	RCCGGY	3 cut(s)	413, 546, 1010
BsrI	ACTGG	2 cut(s)	873, 1838
BssAI	RCCGGY	3 cut(s)	413, 546, 1010
BssMI	GATC	9 cut(s)	96, 176, 252, 264, 429, 756, 813, 1455, 1989
BssNI	GRCGYC	2 cut(s)	77, 411
BssT1I	CCWWGG	4 cut(s)	856, 878, 1727, 1810
Bst2UI	CCWGG	5 cut(s)	326, 596, 745, 1269, 2202
Bst4CI	ACNGT	3 cut(s)	118, 1153, 1945
Bst6I	CTCTTC	3 cut(s)	36, 611, 1175
BstACI	GRCGYC	2 cut(s)	77, 411
BstBAI	YACGTR	1 cut(s)	382
BstC8I	GCNNGC	5 cut(s)	415, 564, 1138, 1374, 1878
BstDEI	CTNAG	5 cut(s)	510, 1196, 1843, 1936, 2008
BstDSI	CCRYGG	3 cut(s)	878, 1727, 2035
BstEII	GGTNACC	2 cut(s)	124, 1742
BstF5I	GGATG	6 cut(s)	23, 997, 1277, 2086, 2133, 2173
BstFNI	CGCG	6 cut(s)	185, 260, 269, 428, 1310, 2037
BstH2I	RGCGCY	3 cut(s)	80, 414, 491
BstHHI	GCGC	4 cut(s)	79, 262, 413, 490
BstKTI	GATC	9 cut(s)	99, 179, 255, 267, 432, 759, 816, 1458, 1992
BstMAI	GTCTC	2 cut(s)	833, 1176
BstMBI	GATC	9 cut(s)	96, 176, 252, 264, 429, 756, 813, 1455, 1989
BstMCI	CGRYCG	3 cut(s)	99, 150, 313
BstNI	CCWGG	5 cut(s)	326, 596, 745, 1269, 2202
BstNSI	RCATGY	4 cut(s)	475, 1326, 1957, 2138
BstPAI	GACNNNNGTC	1 cut(s)	1946
BstPI	GGTNACC	2 cut(s)	124, 1742
BstSFI	CTRYAG	1 cut(s)	1854
BstSLI	GKGCMC	1 cut(s)	1236
BstUI	CGCG	6 cut(s)	185, 260, 269, 428, 1310, 2037
BstV1I	GCAGC	5 cut(s)	477, 699, 889, 1486, 1652
BstV2I	GAAGAC	4 cut(s)	310, 1229, 1569, 1744
BstX2I	RGATCY	3 cut(s)	176, 756, 1989
BstYI	RGATCY	3 cut(s)	176, 756, 1989
BstZI	CGGCCG	1 cut(s)	147
Bsu36I	CCTNAGG	1 cut(s)	2008
BsuI	GTATCC	2 cut(s)	1298, 1494
BtgI	CCRYGG	3 cut(s)	878, 1727, 2035
BtrI	CACGTC	1 cut(s)	1005
BtsCI	GGATG	6 cut(s)	23, 997, 1277, 2086, 2133, 2173
BtsIMutI	CAGTG	1 cut(s)	1149
Cac8I	GCNNGC	5 cut(s)	415, 564, 1138, 1374, 1878
CaiI	CAGNNNCTG	1 cut(s)	1967
CciI	TCATGA	1 cut(s)	1245
CfoI	GCGC	4 cut(s)	79, 262, 413, 490
Cfr10I	RCCGGY	3 cut(s)	413, 546, 1010
Cfr13I	GGNCC	9 cut(s)	274, 359, 531, 556, 837, 1085, 1777, 1787, 1807
Cfr42I	CCGCGG	1 cut(s)	2038
Cfr9I	CCCGGG	1 cut(s)	355
CseI	GACGC	1 cut(s)	178
Csp6I	GTAC	8 cut(s)	223, 550, 1101, 1465, 1629, 2029, 2113, 2160
CviQI	GTAC	8 cut(s)	223, 550, 1101, 1465, 1629, 2029, 2113, 2160
DdeI	CTNAG	5 cut(s)	510, 1196, 1843, 1936, 2008
DinI	GGCGCC	2 cut(s)	78, 412
DpnI	GATC	9 cut(s)	98, 178, 254, 266, 431, 758, 815, 1457, 1991
DpnII	GATC	9 cut(s)	96, 176, 252, 264, 429, 756, 813, 1455, 1989
DraIII	CACNNNGTG	1 cut(s)	439
DrdI	GACNNNNNNGTC	1 cut(s)	804
DseDI	GACNNNNNNGTC	1 cut(s)	804
EaeI	YGGCCR	3 cut(s)	147, 283, 1012
EagI	CGGCCG	1 cut(s)	147
Eam1104I	CTCTTC	3 cut(s)	36, 611, 1175
EarI	CTCTTC	3 cut(s)	36, 611, 1175
EciI	GGCGGA	2 cut(s)	346, 533
Ecl136II	GAGCTC	1 cut(s)	2075
EclXI	CGGCCG	1 cut(s)	147
Eco130I	CCWWGG	4 cut(s)	856, 878, 1727, 1810
Eco24I	GRGCYC	2 cut(s)	1727, 2077
Eco31I	GGTCTC	1 cut(s)	833
Eco32I	GATATC	1 cut(s)	1493
Eco47I	GGWCC	5 cut(s)	274, 556, 837, 1085, 1807
Eco52I	CGGCCG	1 cut(s)	147
Eco53kI	GAGCTC	1 cut(s)	2075
Eco57I	CTGAAG	3 cut(s)	20, 592, 753
Eco72I	CACGTG	1 cut(s)	382
Eco81I	CCTNAGG	1 cut(s)	2008
Eco88I	CYCGRG	2 cut(s)	355, 1599
Eco91I	GGTNACC	2 cut(s)	124, 1742
EcoICRI	GAGCTC	1 cut(s)	2075
EcoO109I	RGGNCCY	3 cut(s)	1085, 1777, 1807
EcoO65I	GGTNACC	2 cut(s)	124, 1742
EcoRI	GAATTC	1 cut(s)	341
EcoRII	CCWGG	5 cut(s)	324, 594, 743, 1267, 2200
EcoRV	GATATC	1 cut(s)	1493
EcoT14I	CCWWGG	4 cut(s)	856, 878, 1727, 1810
EcoT38I	GRGCYC	2 cut(s)	1727, 2077
EgeI	GGCGCC	2 cut(s)	78, 412
EheI	GGCGCC	2 cut(s)	78, 412
ErhI	CCWWGG	4 cut(s)	856, 878, 1727, 1810
FalI	AAGNNNNNCTT	2 cut(s)	1193, 1225
FaqI	GGGAC	4 cut(s)	260, 1250, 1820, 1954
FauI	CCCGC	2 cut(s)	285, 571
FauNDI	CATATG	1 cut(s)	1694
FbaI	TGATCA	1 cut(s)	1455
FblI	GTMKAC	2 cut(s)	423, 1007
Fnu4HI	GCNGC	8 cut(s)	491, 567, 688, 903, 1308, 1500, 1641, 2038
FokI	GGATG	6 cut(s)	10, 1004, 1284, 2093, 2140, 2180
FriOI	GRGCYC	2 cut(s)	1727, 2077
Fsp4HI	GCNGC	8 cut(s)	491, 567, 688, 903, 1308, 1500, 1641, 2038
FspBI	CTAG	5 cut(s)	776, 788, 1385, 1983, 2123
GlaI	GCGC	4 cut(s)	78, 261, 412, 489
GluI	GCNGC	8 cut(s)	491, 567, 688, 903, 1308, 1500, 1641, 2038
GsaI	CCCAGC	2 cut(s)	532, 1851
GsuI	CTGGAG	2 cut(s)	1944, 2091
HaeII	RGCGCY	3 cut(s)	80, 414, 491
HgaI	GACGC	1 cut(s)	178
HhaI	GCGC	4 cut(s)	79, 262, 413, 490
Hin1I	GRCGYC	2 cut(s)	77, 411
Hin6I	GCGC	4 cut(s)	77, 260, 411, 488
HinP1I	GCGC	4 cut(s)	77, 260, 411, 488
HincII	GTYRAC	1 cut(s)	1951
HindII	GTYRAC	1 cut(s)	1951
HindIII	AAGCTT	1 cut(s)	1571
HinfI	GANTC	5 cut(s)	658, 1413, 1548, 1797, 2001
HphI	GGTGA	5 cut(s)	106, 118, 298, 337, 1754
Hpy166II	GTNNAC	6 cut(s)	424, 1002, 1008, 1234, 1951, 2140
Hpy188I	TCNGA	7 cut(s)	39, 161, 176, 611, 991, 1437, 2211
Hpy188III	TCNNGA	6 cut(s)	795, 830, 1246, 1559, 2070, 2078
Hpy8I	GTNNAC	6 cut(s)	424, 1002, 1008, 1234, 1951, 2140
Hpy99I	CGWCG	2 cut(s)	134, 500
HpyAV	CCTTC	6 cut(s)	147, 211, 619, 985, 1219, 1900
HpyCH4III	ACNGT	3 cut(s)	118, 1153, 1945
HpyCH4IV	ACGT	5 cut(s)	155, 369, 381, 420, 1004
HpyF3I	CTNAG	5 cut(s)	510, 1196, 1843, 1936, 2008
HpySE526I	ACGT	5 cut(s)	155, 369, 381, 420, 1004
Hsp92I	GRCGYC	2 cut(s)	77, 411
HspAI	GCGC	4 cut(s)	77, 260, 411, 488
KasI	GGCGCC	2 cut(s)	76, 410
KpnI	GGTACC	1 cut(s)	226
KroI	GCCGGC	1 cut(s)	413
KroNI	GCCGGC	1 cut(s)	415
Ksp22I	TGATCA	1 cut(s)	1455
KspI	CCGCGG	1 cut(s)	2038
Kzo9I	GATC	9 cut(s)	96, 176, 252, 264, 429, 756, 813, 1455, 1989
LguI	GCTCTTC	1 cut(s)	611
LmnI	GCTCC	7 cut(s)	376, 1192, 1600, 1864, 2046, 2072, 2197
Lsp1109I	GCAGC	5 cut(s)	477, 699, 889, 1486, 1652
LweI	GCATC	4 cut(s)	1428, 1750, 2071, 2118
MaeI	CTAG	5 cut(s)	776, 788, 1385, 1983, 2123
MaeII	ACGT	5 cut(s)	155, 369, 381, 420, 1004
MaeIII	GTNAC	4 cut(s)	124, 151, 1707, 1742
MalI	GATC	9 cut(s)	98, 178, 254, 266, 431, 758, 815, 1457, 1991
MbiI	CCGCTC	1 cut(s)	280
MboI	GATC	9 cut(s)	96, 176, 252, 264, 429, 756, 813, 1455, 1989
MfeI	CAATTG	2 cut(s)	1343, 1349
MflI	RGATCY	3 cut(s)	176, 756, 1989
MhlI	GDGCHC	8 cut(s)	381, 387, 446, 1236, 1682, 1727, 1935, 2077
Mly113I	GGCGCC	2 cut(s)	77, 411
MlyI	GAGTC	1 cut(s)	1422
MmeI	TCCRAC	1 cut(s)	1390
MroNI	GCCGGC	1 cut(s)	413
MroXI	GAANNNNTTC	1 cut(s)	662
MseI	TTAA	2 cut(s)	2144, 2214
MslI	CAYNNNNRTG	4 cut(s)	512, 1535, 2058, 2230
MspA1I	CMGCKG	2 cut(s)	1499, 2037
MunI	CAATTG	2 cut(s)	1343, 1349
MvaI	CCWGG	5 cut(s)	326, 596, 745, 1269, 2202
MvnI	CGCG	6 cut(s)	185, 260, 269, 428, 1310, 2037
NaeI	GCCGGC	1 cut(s)	415
NarI	GGCGCC	2 cut(s)	77, 411
NciI	CCSGG	8 cut(s)	146, 314, 356, 357, 535, 711, 1488, 1740
NcoI	CCATGG	2 cut(s)	878, 1727
NdeI	CATATG	1 cut(s)	1694
NdeII	GATC	9 cut(s)	96, 176, 252, 264, 429, 756, 813, 1455, 1989
NgoMIV	GCCGGC	1 cut(s)	413
NmeAIII	GCCGAG	1 cut(s)	261
NmuCI	GTSAC	3 cut(s)	124, 151, 1742
NspI	RCATGY	4 cut(s)	475, 1326, 1957, 2138
OliI	CACNNNNGTG	1 cut(s)	512
PaeR7I	CTCGAG	1 cut(s)	1599
PagI	TCATGA	1 cut(s)	1245
PciI	ACATGT	2 cut(s)	471, 2134
PciSI	GCTCTTC	1 cut(s)	611
PcsI	WCGNNNNNNNCGW	2 cut(s)	114, 1764
PdiI	GCCGGC	1 cut(s)	415
PdmI	GAANNNNTTC	1 cut(s)	662
PfeI	GAWTC	4 cut(s)	658, 1548, 1797, 2001
PflFI	GACNNNGTC	2 cut(s)	314, 1748
PflMI	CCANNNNNTGG	5 cut(s)	292, 576, 644, 879, 1905
PfoI	TCCNGGA	1 cut(s)	1486
PkrI	GCNGC	8 cut(s)	492, 568, 689, 904, 1309, 1501, 1642, 2039
Ple19I	CGATCG	1 cut(s)	99
PleI	GAGTC	1 cut(s)	1421
PluTI	GGCGCC	2 cut(s)	80, 414
PmaCI	CACGTG	1 cut(s)	382
PmlI	CACGTG	1 cut(s)	382
PpsI	GAGTC	1 cut(s)	1421
Ppu21I	YACGTR	1 cut(s)	382
PpuMI	RGGWCCY	2 cut(s)	1085, 1807
PscI	ACATGT	2 cut(s)	471, 2134
PshAI	GACNNNNGTC	1 cut(s)	1946
Psp124BI	GAGCTC	1 cut(s)	2077
Psp5II	RGGWCCY	2 cut(s)	1085, 1807
Psp6I	CCWGG	5 cut(s)	324, 594, 743, 1267, 2200
PspCI	CACGTG	1 cut(s)	382
PspEI	GGTNACC	2 cut(s)	124, 1742
PspFI	CCCAGC	2 cut(s)	528, 1847
PspGI	CCWGG	5 cut(s)	324, 594, 743, 1267, 2200
PspPI	GGNCC	9 cut(s)	274, 359, 531, 556, 837, 1085, 1777, 1787, 1807
PspPPI	RGGWCCY	2 cut(s)	1085, 1807
PspXI	VCTCGAGB	1 cut(s)	1599
PstNI	CAGNNNCTG	1 cut(s)	1967
PsuI	RGATCY	3 cut(s)	176, 756, 1989
PsyI	GACNNNGTC	2 cut(s)	314, 1748
PvuI	CGATCG	1 cut(s)	99
PvuII	CAGCTG	1 cut(s)	1499
RsaI	GTAC	8 cut(s)	224, 551, 1102, 1466, 1630, 2030, 2114, 2161
RsaNI	GTAC	8 cut(s)	223, 550, 1101, 1465, 1629, 2029, 2113, 2160
RseI	CAYNNNNRTG	4 cut(s)	512, 1535, 2058, 2230
SacI	GAGCTC	1 cut(s)	2077
SacII	CCGCGG	1 cut(s)	2038
SapI	GCTCTTC	1 cut(s)	611
SaqAI	TTAA	2 cut(s)	2144, 2214
SatI	GCNGC	8 cut(s)	491, 567, 688, 903, 1308, 1500, 1641, 2038
Sau3AI	GATC	9 cut(s)	96, 176, 252, 264, 429, 756, 813, 1455, 1989
Sau96I	GGNCC	9 cut(s)	274, 359, 531, 556, 837, 1085, 1777, 1787, 1807
SchI	GAGTC	1 cut(s)	1422
SduI	GDGCHC	8 cut(s)	381, 387, 446, 1236, 1682, 1727, 1935, 2077
SfaNI	GCATC	4 cut(s)	1428, 1750, 2071, 2118
SfcI	CTRYAG	1 cut(s)	1854
SfoI	GGCGCC	2 cut(s)	78, 412
Sfr274I	CTCGAG	1 cut(s)	1599
Sfr303I	CCGCGG	1 cut(s)	2038
SgrBI	CCGCGG	1 cut(s)	2038
SinI	GGWCC	5 cut(s)	274, 556, 837, 1085, 1807
SlaI	CTCGAG	1 cut(s)	1599
SmaI	CCCGGG	1 cut(s)	357
SmiMI	CAYNNNNRTG	4 cut(s)	512, 1535, 2058, 2230
SmlI	CTYRAG	1 cut(s)	1599
SmoI	CTYRAG	1 cut(s)	1599
SspDI	GGCGCC	2 cut(s)	76, 410
SspMI	CTAG	5 cut(s)	776, 788, 1385, 1983, 2123
SstI	GAGCTC	1 cut(s)	2077
StyI	CCWWGG	4 cut(s)	856, 878, 1727, 1810
TaaI	ACNGT	3 cut(s)	118, 1153, 1945
TaiI	ACGT	5 cut(s)	158, 372, 384, 423, 1007
TaqI	TCGA	4 cut(s)	99, 251, 831, 1600
TaqII	GACCGA	1 cut(s)	815
TatI	WGTACW	2 cut(s)	1464, 2112
TauI	GCSGC	3 cut(s)	569, 1310, 2040
TfiI	GAWTC	4 cut(s)	658, 1548, 1797, 2001
Tru1I	TTAA	2 cut(s)	2144, 2214
Tru9I	TTAA	2 cut(s)	2144, 2214
TscAI	CASTG	1 cut(s)	1156
TseFI	GTSAC	3 cut(s)	124, 151, 1742
TseI	GCWGC	5 cut(s)	490, 687, 902, 1499, 1640
Tsp45I	GTSAC	3 cut(s)	124, 151, 1742
TspDTI	ATGAA	5 cut(s)	57, 1148, 1553, 1600, 1601
TspGWI	ACGGA	3 cut(s)	289, 1756, 2210
TspMI	CCCGGG	1 cut(s)	355
TspRI	CASTG	1 cut(s)	1156
Tth111I	GACNNNGTC	2 cut(s)	314, 1748
Van91I	CCANNNNNTGG	5 cut(s)	292, 576, 644, 879, 1905
VneI	GTGCAC	1 cut(s)	1232
VpaK11BI	GGWCC	5 cut(s)	274, 556, 837, 1085, 1807
XapI	RAATTY	3 cut(s)	88, 341, 1975
XceI	RCATGY	4 cut(s)	475, 1326, 1957, 2138
XcmI	CCANNNNNNNNNTGG	2 cut(s)	514, 1902
XhoI	CTCGAG	1 cut(s)	1599
XmaI	CCCGGG	1 cut(s)	355
XmiI	GTMKAC	2 cut(s)	423, 1007
XmnI	GAANNNNTTC	1 cut(s)	662
XspI	CTAG	5 cut(s)	776, 788, 1385, 1983, 2123

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.