Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0001550

Physical Location & Seq

Genomic Coordinates Forward (+)

25616543 .. 25621880

Gene Structure 5338 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1116800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2274 bp

ATGACAGAACGCAGCAGAGAATCCGTGGAAGAAGCATCGTCTCATGAAATCACATCCCCTCTCATTCCTGGGGAAGATAAAAAACATGGCGACTTCCATGGCCAATCATCATCTTCCCAATCAACAGATGAAGAAAATTCACCGGTAGAACAAGTAGCTCTAACTGTGCCGACCACAGACGATCCATCCCTCCCCGTCTTAACGTTCCGAATGTGGGTCCTAGGCACTCTCTCCTGCGTCCTCCTCTCCTTTCTCAACCAGTTCTTCTGGTACAGAACTGAGCCCCTCTCCATCACCGCAATCTCCGCCCAGATTGCAGTGGTGCCTCTGGGGCAGCTCATGGCTTCAAAAATCACCAACCGTGTCTTCTTCAAAGGGTCCCGCTGGGAATTTAACCTAAACCCTGGCCCCTTCAACGTTAAGGAACATGTTCTAATTACCATCTTCGCCAACTCTGGCGCCGGTACCGTCTACGCCATCCATATTGTTACCGTGGTTAAAGTTTTTTACAAGAGGCACATCACCTTCTTCGTGTCCTTGCTTGTCATCTTAACAACTCAGGTATTAGGGTTTGGTTGGGCTGGGATTTTCAGAAGGTACTTGGTTGAGCCAGCTGCTATGTGGTGGCCAGCAAACCTGGTTCAAGTTTCACTGTTCAGGGCTCTCCACGAGAAAGAAGTAAGGCCCAAGGGTGGGTTGACACGTACACAGTTCTTCCTAATAGCCTTCATGTGCAGCTTTGCCTACTATGTTTTCCCAGGCTACCTCTTTCAGATGCTAACCTCCCTCTCATGGATATGTTGGATTTTCCCCACCAATGTCTTGGCCCAACAGCTCGGCTCAGGTCTTTATGGGCTTGGAATTGGAGCTGTTGGGCTTGACTGGTCAACCATCTCCGCCTATCTTGGAAGCCCACTTGCAAGCCCATGGTTTGCCACAGCCAACGTGGCTGCTGGTTTCTTCTTTGTCATGTACATATTGACTCCCCTTTCTTACTGGTTTAACATCTACAAAGCCAAAACCTTCCCCATTTTCTCAAACTCAATGTTCACATCAGATGGTCAAGAATACAACATAACAGCCATCATCGACTCCAATTTCCACCTTGATTATGATGCCTATGATCGAGAAGGTCCTCTTTACATCAGCATAATTTTCACCATAACTTACGGTGTTGGCTTTGCTACACTTACCGCCACAATTGTACATGTTGCTCTATTTCATGGAAGGGAAATATGGGAGCAAAGCAAAGCAAGTTTCAAGGAGAAGAAAATGGACATACACACAAGGTTGATGCAGAGGTACAACCAAGTGCCTGAGTGGTGGTTTGTAGTCCTACTTTTGGCTAACATTGCACTCACTATATTTACCTGCGAATATTACAATGACCAACTTCAGTTGCCTTGGTGGGGGGTTTTACTAGCTTGTGGTATTGCCATTTTCTTCACCCTCCCAATTGGGATTATCACTGCCATTACAAATCAGGCACCAGGCTTGAACGTCATCACTGAATACATAATTGGGTACATCTACCCAGGATACCCAGTTGCTAATATGTGTTTTAAGGTGTATGGCTACATAAGTATGTCACAAGCCGTCACATTTTTGCAAGACTTCAAGCTTGGCCACTACATGAAAATTCCTCCAAGAACTATGTTTATGGCTCAGGTTGTGGGAACCCTAATAGCAGCCATAGTCTACTTAAGCACAGCTTGGTGGTTAATGGAAACCATCCCAGACATATGTGAGGACACGACATCAGTGTGGACTTGCCCGAGCGACACAGTGTTTTATGATGCCTCGGTCATATGGGGATTGATTGGTCCTAGAAGAATATTTGGTGACTTGGGCACGTATGAGGCAGTCAACTGGTTCTTCCTAGTTGGTGCAGTTGCCCCTATTTTTGTATGGCTAGCTACCAAGGCCTTCCCACGACAAGAGTGGATTAGGCTCATCAACATGCCAGTCTTCATGGGAGCGACAAGCTCAATGCCGCCAGCTACGGCGGTGAACTACACTTCTTGGATCATTTTAGGGTTTTTGTCTGGTTTTGTAGTGTATAGGTATAGGCCAGATTGGTGGAAGCGCCACAATTATGTTCTATCTGGGGCACTTGACGCAGGACTTGCCTTCATGGGGGTACTTTTGTATTTTAGTTTGGGGTTGGAGGACATTAGTCTTAGCTGGTGGGGGAATGACCTTGATGGTTGTCCCCTGGCTACTTGCCCTACGGCCAAGGGAGTGGTTGTGGAGGGTTGCCCTATTTACACATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006857 GO:0008150 GO:0015833 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0031226 GO:0035672 GO:0035673 GO:0042886 GO:0042887 GO:0044425 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OPT

Protein Analysis

758

Amino Acids

85.34

Weight (kDa)

5.93

Isoelectric Point (pI)

35.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
OPT	PF03169	67 - 719	2.8e-180	OPT oligopeptide transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001550)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G10770 AT4G10770
fragaria_vesca	FvH4_1g11690 FvH4_1g11690 FvH4_1g11690 FvH4_1g11690 FvH4_1g11690 FvH4_5g11060 FvH4_5g11060 FvH4_5g11060 FvH4_5g11060 FvH4_5g11060
malus_domestica	MD02G1129900.v1.1 MD06G1116800.v1.1 MD14G1124200.v1.1
prunus_persica	Prupe.5G128100_v2.0.a1 Prupe.5G128100_v2.0.a1 Prupe.5G128100_v2.0.a1 Prupe.5G128100_v2.0.a1 Prupe.7G169800_v2.0.a1 Prupe.7G169800_v2.0.a1 Prupe.7G169800_v2.0.a1
pyrus_communis	pycom02g10180 pycom06g10890 pycom14g11000
rosa_chinensis	RchiOBHm_Chr2g0099261 RchiOBHm_Chr7g0186741
rosa_laevigata	RLG00000004820 RLG00000016866
rosa_multiflora	Rmu_co8201022.1_g000001 Rmu_co8437885.1_g000001 Rmu_co8448977.1_g000001 Rmu_sc0009734.1_g000005
rosa_roxburghii	Rroxscaffold_2G00143270 Rroxscaffold_3G00267870
rosa_rugosa	Rorug02G0078300 Rorug02G0078300 Rorug02G0078300 Rorug06G0476200 Rorug06G0476300
rosa_samantha	Rh2AG127500 Rh2BG130500 Rh2CG131700 Rh2DG132100 Rh7AG064300 Rh7BG080800 Rh7CG083200 Rh7DG084100
rosa_wichuraiana	Rw2G009840 Rw7G007210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1379
Acc65I	GGTACC	1 cut(s)	464
AccB1I	GGYRCC	4 cut(s)	322, 458, 464, 1486
AccI	GTMKAC	2 cut(s)	471, 1698
AciI	CCGC	7 cut(s)	297, 306, 382, 897, 1194, 1994, 2006
AclI	AACGTT	2 cut(s)	203, 417
AclWI	GGATC	2 cut(s)	176, 2033
AcoI	YGGCCR	4 cut(s)	100, 626, 1624, 2232
AcsI	RAATTY	3 cut(s)	136, 389, 1638
AcuI	CTGAAG	1 cut(s)	1379
AcyI	GRCGYC	1 cut(s)	459
AfaI	GTAC	9 cut(s)	272, 466, 599, 706, 974, 1206, 1304, 1526, 2142
AfiI	CCNNNNNNNGG	7 cut(s)	214, 692, 693, 792, 1342, 1409, 2136
AflII	CTTAAG	1 cut(s)	1702
AflIII	ACRYGT	3 cut(s)	427, 701, 1207
AgeI	ACCGGT	1 cut(s)	142
AgsI	TTSAA	7 cut(s)	348, 373, 415, 644, 1261, 1498, 1618
AjnI	CCWGG	7 cut(s)	67, 403, 636, 757, 1489, 1534, 2214
AjuI	GAANNNNNNNTTGG	4 cut(s)	350, 382, 1503, 1535
Alw26I	GTCTC	1 cut(s)	45
AlwI	GGATC	2 cut(s)	176, 2033
Ama87I	CYCGRG	1 cut(s)	1774
AoxI	GGCC	9 cut(s)	100, 406, 626, 683, 825, 1624, 1923, 2069, 2232
ApeKI	GCWGC	6 cut(s)	12, 334, 614, 735, 950, 1688
ApoI	RAATTY	3 cut(s)	136, 389, 1638
AsiGI	ACCGGT	1 cut(s)	142
Asp700I	GAANNNNTTC	1 cut(s)	429
Asp718I	GGTACC	1 cut(s)	464
AspA2I	CCTAGG	1 cut(s)	220
AspLEI	GCGC	2 cut(s)	461, 2088
AspS9I	GGNCC	7 cut(s)	217, 378, 407, 684, 826, 1133, 1823
AsuHPI	GGTGA	8 cut(s)	132, 286, 346, 514, 1150, 1438, 1853, 2020
AsuNHI	GCTAGC	1 cut(s)	1912
AvaI	CYCGRG	1 cut(s)	1774
AvaII	GGWCC	4 cut(s)	217, 378, 1133, 1823
AvrII	CCTAGG	1 cut(s)	220
BaeGI	GKGCMC	2 cut(s)	1853, 2113
BaeI	ACNNNNGTAYC	2 cut(s)	2132, 2165
BalI	TGGCCA	3 cut(s)	102, 628, 1626
BanI	GGYRCC	4 cut(s)	322, 458, 464, 1486
BanII	GRGCYC	2 cut(s)	285, 664
BauI	CACGAG	1 cut(s)	668
BbsI	GAAGAC	2 cut(s)	358, 1960
BbvI	GCAGC	6 cut(s)	24, 346, 601, 747, 937, 1700
BccI	CCATC	9 cut(s)	193, 299, 449, 485, 899, 1052, 1091, 1739, 2198
BceAI	ACGGC	3 cut(s)	1580, 2019, 2247
BciT130I	CCWGG	7 cut(s)	69, 405, 638, 759, 1491, 1536, 2216
BciVI	GTATCC	1 cut(s)	1532
BcoDI	GTCTC	1 cut(s)	45
BfaI	CTAG	5 cut(s)	221, 1421, 1827, 1880, 1913
BfoI	RGCGCY	2 cut(s)	462, 2089
BfrI	CTTAAG	1 cut(s)	1702
BfuAI	ACCTGC	1 cut(s)	1379
BfuI	GTATCC	1 cut(s)	1532
BglI	GCCNNNNNGGC	2 cut(s)	331, 947
BisI	GCNGC	7 cut(s)	13, 335, 615, 736, 951, 1689, 1994
BlnI	CCTAGG	1 cut(s)	220
BlsI	GCNGC	7 cut(s)	14, 336, 616, 737, 952, 1690, 1995
Bme1390I	CCNGG	7 cut(s)	69, 405, 638, 759, 1491, 1536, 2216
Bme18I	GGWCC	4 cut(s)	217, 378, 1133, 1823
BmeT110I	CYCGRG	1 cut(s)	1774
BmgT120I	GGNCC	7 cut(s)	217, 378, 407, 684, 826, 1133, 1823
BmiI	GGNNCC	9 cut(s)	218, 324, 379, 380, 409, 460, 466, 1488, 1678
BmrFI	CCNGG	7 cut(s)	69, 405, 638, 759, 1491, 1536, 2216
BmrI	ACTGGG	1 cut(s)	1538
BmsI	GCATC	5 cut(s)	44, 765, 1105, 1284, 1786
BmtI	GCTAGC	1 cut(s)	1916
BmuI	ACTGGG	1 cut(s)	1538
BoxI	GACNNNNGTC	1 cut(s)	2175
BpiI	GAAGAC	2 cut(s)	358, 1960
BplI	GAGNNNNNCTC	2 cut(s)	272, 304
Bpu10I	CCTNAGC	2 cut(s)	841, 1665
BsaAI	YACGTR	2 cut(s)	704, 1854
BsaHI	GRCGYC	1 cut(s)	459
BsaWI	WCCGGW	1 cut(s)	142
BsaXI	ACNNNNNCTCC	2 cut(s)	2232, 2262
Bsc4I	CCNNNNNNNGG	7 cut(s)	214, 692, 693, 792, 1342, 1409, 2136
Bse118I	RCCGGY	2 cut(s)	142, 461
Bse1I	ACTGG	6 cut(s)	259, 887, 1001, 1544, 1874, 1964
Bse3DI	GCAATG	1 cut(s)	1350
BseBI	CCWGG	7 cut(s)	69, 405, 638, 759, 1491, 1536, 2216
BseGI	GGATG	4 cut(s)	53, 185, 477, 1731
BseLI	CCNNNNNNNGG	7 cut(s)	214, 692, 693, 792, 1342, 1409, 2136
BseMI	GCAATG	1 cut(s)	1350
BseMII	CTCAG	5 cut(s)	270, 572, 855, 1308, 1679
BseNI	ACTGG	6 cut(s)	259, 887, 1001, 1544, 1874, 1964
BseRI	GAGGAG	1 cut(s)	233
BseSI	GKGCMC	2 cut(s)	1853, 2113
BseXI	GCAGC	6 cut(s)	24, 346, 601, 747, 937, 1700
BseYI	CCCAGC	2 cut(s)	384, 581
BsgI	GTGCAG	2 cut(s)	754, 1908
BshFI	GGCC	9 cut(s)	102, 408, 628, 685, 827, 1626, 1925, 2071, 2234
BshNI	GGYRCC	4 cut(s)	322, 458, 464, 1486
BshTI	ACCGGT	1 cut(s)	142
BsiHKCI	CYCGRG	1 cut(s)	1774
BsiSI	CCGG	2 cut(s)	143, 462
BslFI	GGGAC	2 cut(s)	364, 2196
BslI	CCNNNNNNNGG	7 cut(s)	214, 692, 693, 792, 1342, 1409, 2136
BsmAI	GTCTC	1 cut(s)	45
BsmBI	CGTCTC	1 cut(s)	45
BsmFI	GGGAC	2 cut(s)	364, 2196
BsnI	GGCC	9 cut(s)	102, 408, 628, 685, 827, 1626, 1925, 2071, 2234
BsoBI	CYCGRG	1 cut(s)	1774
Bsp1286I	GDGCHC	4 cut(s)	285, 664, 1853, 2113
Bsp1407I	TGTACA	2 cut(s)	972, 1204
Bsp143I	GATC	3 cut(s)	181, 1123, 2025
Bsp19I	CCATGG	2 cut(s)	97, 926
BspACI	CCGC	7 cut(s)	297, 306, 382, 897, 1194, 1994, 2006
BspANI	GGCC	9 cut(s)	102, 408, 628, 685, 827, 1626, 1925, 2071, 2234
BspCNI	CTCAG	5 cut(s)	271, 571, 854, 1309, 1678
BspHI	TCATGA	1 cut(s)	43
BspLI	GGNNCC	9 cut(s)	218, 324, 379, 380, 409, 460, 466, 1488, 1678
BspMI	ACCTGC	1 cut(s)	1379
BspOI	GCTAGC	1 cut(s)	1916
BspPI	GGATC	2 cut(s)	176, 2033
BspT107I	GGYRCC	4 cut(s)	322, 458, 464, 1486
BspTI	CTTAAG	1 cut(s)	1702
BsrDI	GCAATG	1 cut(s)	1350
BsrFI	RCCGGY	2 cut(s)	142, 461
BsrGI	TGTACA	2 cut(s)	972, 1204
BsrI	ACTGG	6 cut(s)	259, 887, 1001, 1544, 1874, 1964
BssAI	RCCGGY	2 cut(s)	142, 461
BssMI	GATC	3 cut(s)	181, 1123, 2025
BssNI	GRCGYC	1 cut(s)	459
BssSI	CACGAG	1 cut(s)	668
BssT1I	CCWWGG	7 cut(s)	97, 220, 687, 926, 1403, 1920, 2235
Bst2BI	CACGAG	1 cut(s)	668
Bst2UI	CCWGG	7 cut(s)	69, 405, 638, 759, 1491, 1536, 2216
Bst4CI	ACNGT	8 cut(s)	166, 362, 469, 493, 654, 711, 1172, 1786
BstACI	GRCGYC	1 cut(s)	459
BstAFI	CTTAAG	1 cut(s)	1702
BstAPI	GCANNNNNTGC	1 cut(s)	2126
BstAUI	TGTACA	2 cut(s)	972, 1204
BstBAI	YACGTR	2 cut(s)	704, 1854
BstC8I	GCNNGC	5 cut(s)	612, 630, 922, 1914, 1998
BstDEI	CTNAG	6 cut(s)	279, 558, 841, 1317, 1665, 2180
BstDSI	CCRYGG	4 cut(s)	24, 97, 492, 926
BstF5I	GGATG	4 cut(s)	53, 185, 477, 1731
BstH2I	RGCGCY	2 cut(s)	462, 2089
BstHHI	GCGC	2 cut(s)	461, 2088
BstKTI	GATC	3 cut(s)	184, 1126, 2028
BstMAI	GTCTC	1 cut(s)	45
BstMBI	GATC	3 cut(s)	181, 1123, 2025
BstMWI	GCNNNNNNNGC	8 cut(s)	305, 314, 331, 947, 1352, 1922, 2117, 2126
BstNI	CCWGG	7 cut(s)	69, 405, 638, 759, 1491, 1536, 2216
BstNSI	RCATGY	3 cut(s)	431, 1211, 1963
BstPAI	GACNNNNGTC	1 cut(s)	2175
BstSCI	CCNGG	7 cut(s)	67, 403, 636, 757, 1489, 1534, 2214
BstSLI	GKGCMC	2 cut(s)	1853, 2113
BstV1I	GCAGC	6 cut(s)	24, 346, 601, 747, 937, 1700
BstV2I	GAAGAC	2 cut(s)	358, 1960
BstXI	CCANNNNNNTGG	3 cut(s)	823, 2079, 2242
BsuI	GTATCC	1 cut(s)	1532
BsuRI	GGCC	9 cut(s)	102, 408, 628, 685, 827, 1626, 1925, 2071, 2234
BtgI	CCRYGG	4 cut(s)	24, 97, 492, 926
BtsCI	GGATG	4 cut(s)	53, 185, 477, 1731
BtsI	GCAGTG	2 cut(s)	324, 1467
BtsIMutI	CAGTG	6 cut(s)	324, 650, 1467, 1506, 1767, 1791
BveI	ACCTGC	1 cut(s)	1379
Cac8I	GCNNGC	5 cut(s)	612, 630, 922, 1914, 1998
CciI	TCATGA	1 cut(s)	43
CfoI	GCGC	2 cut(s)	461, 2088
Cfr10I	RCCGGY	2 cut(s)	142, 461
Cfr13I	GGNCC	7 cut(s)	217, 378, 407, 684, 826, 1133, 1823
CseI	GACGC	2 cut(s)	226, 2126
CsiI	ACCWGGT	1 cut(s)	636
Csp6I	GTAC	9 cut(s)	271, 465, 598, 705, 973, 1205, 1303, 1525, 2141
CspAI	ACCGGT	1 cut(s)	142
CviQI	GTAC	9 cut(s)	271, 465, 598, 705, 973, 1205, 1303, 1525, 2141
DdeI	CTNAG	6 cut(s)	279, 558, 841, 1317, 1665, 2180
DinI	GGCGCC	1 cut(s)	460
DpnI	GATC	3 cut(s)	183, 1125, 2027
DpnII	GATC	3 cut(s)	181, 1123, 2025
EaeI	YGGCCR	4 cut(s)	100, 626, 1624, 2232
EciI	GGCGGA	2 cut(s)	295, 886
Eco130I	CCWWGG	7 cut(s)	97, 220, 687, 926, 1403, 1920, 2235
Eco147I	AGGCCT	1 cut(s)	1925
Eco24I	GRGCYC	2 cut(s)	285, 664
Eco47I	GGWCC	4 cut(s)	217, 378, 1133, 1823
Eco57I	CTGAAG	1 cut(s)	1379
Eco88I	CYCGRG	1 cut(s)	1774
EcoO109I	RGGNCCY	3 cut(s)	217, 378, 1133
EcoRII	CCWGG	7 cut(s)	67, 403, 636, 757, 1489, 1534, 2214
EcoT14I	CCWWGG	7 cut(s)	97, 220, 687, 926, 1403, 1920, 2235
EcoT38I	GRGCYC	2 cut(s)	285, 664
EgeI	GGCGCC	1 cut(s)	460
EheI	GGCGCC	1 cut(s)	460
ErhI	CCWWGG	7 cut(s)	97, 220, 687, 926, 1403, 1920, 2235
Esp3I	CGTCTC	1 cut(s)	45
FalI	AAGNNNNNCTT	4 cut(s)	1122, 1154, 1696, 1728
FaqI	GGGAC	2 cut(s)	364, 2196
FauI	CCCGC	1 cut(s)	389
FauNDI	CATATG	2 cut(s)	1742, 1808
FblI	GTMKAC	2 cut(s)	471, 1698
Fnu4HI	GCNGC	7 cut(s)	13, 335, 615, 736, 951, 1689, 1994
FokI	GGATG	4 cut(s)	40, 172, 464, 1718
FriOI	GRGCYC	2 cut(s)	285, 664
Fsp4HI	GCNGC	7 cut(s)	13, 335, 615, 736, 951, 1689, 1994
FspBI	CTAG	5 cut(s)	221, 1421, 1827, 1880, 1913
GlaI	GCGC	2 cut(s)	460, 2087
GluI	GCNGC	7 cut(s)	13, 335, 615, 736, 951, 1689, 1994
GsaI	CCCAGC	2 cut(s)	388, 585
HaeII	RGCGCY	2 cut(s)	462, 2089
HaeIII	GGCC	9 cut(s)	102, 408, 628, 685, 827, 1626, 1925, 2071, 2234
HapII	CCGG	2 cut(s)	143, 462
HgaI	GACGC	2 cut(s)	226, 2126
HhaI	GCGC	2 cut(s)	461, 2088
Hin1I	GRCGYC	1 cut(s)	459
Hin6I	GCGC	2 cut(s)	459, 2086
HinP1I	GCGC	2 cut(s)	459, 2086
HincII	GTYRAC	3 cut(s)	699, 888, 1867
HindII	GTYRAC	3 cut(s)	699, 888, 1867
HindIII	AAGCTT	1 cut(s)	1619
HinfI	GANTC	3 cut(s)	20, 982, 1091
HpaII	CCGG	2 cut(s)	143, 462
HphI	GGTGA	8 cut(s)	132, 286, 346, 514, 1150, 1438, 1853, 2020
Hpy166II	GTNNAC	9 cut(s)	472, 699, 707, 888, 1050, 1699, 1767, 1867, 2011
Hpy188I	TCNGA	4 cut(s)	209, 593, 774, 1057
Hpy188III	TCNNGA	3 cut(s)	44, 1064, 1127
Hpy8I	GTNNAC	9 cut(s)	472, 699, 707, 888, 1050, 1699, 1767, 1867, 2011
HpyAV	CCTTC	9 cut(s)	421, 535, 588, 736, 1033, 1124, 1221, 1936, 2140
HpyCH4III	ACNGT	8 cut(s)	166, 362, 469, 493, 654, 711, 1172, 1786
HpyCH4IV	ACGT	6 cut(s)	203, 417, 703, 945, 1500, 1853
HpyCH4V	TGCA	7 cut(s)	317, 735, 920, 1297, 1355, 1609, 1889
HpyF10VI	GCNNNNNNNGC	8 cut(s)	305, 314, 331, 947, 1352, 1922, 2117, 2126
HpyF3I	CTNAG	6 cut(s)	279, 558, 841, 1317, 1665, 2180
HpySE526I	ACGT	6 cut(s)	203, 417, 703, 945, 1500, 1853
Hsp92I	GRCGYC	1 cut(s)	459
HspAI	GCGC	2 cut(s)	459, 2086
KasI	GGCGCC	1 cut(s)	458
KflI	GGGWCCC	1 cut(s)	378
KpnI	GGTACC	1 cut(s)	468
Kzo9I	GATC	3 cut(s)	181, 1123, 2025
LmnI	GCTCC	3 cut(s)	866, 1240, 1976
Lsp1109I	GCAGC	6 cut(s)	24, 346, 601, 747, 937, 1700
LweI	GCATC	5 cut(s)	44, 765, 1105, 1284, 1786
MabI	ACCWGGT	1 cut(s)	636
MaeI	CTAG	5 cut(s)	221, 1421, 1827, 1880, 1913
MaeII	ACGT	6 cut(s)	203, 417, 703, 945, 1500, 1853
MaeIII	GTNAC	4 cut(s)	487, 1587, 1597, 1841
MalI	GATC	3 cut(s)	183, 1125, 2027
MboI	GATC	3 cut(s)	181, 1123, 2025
MfeI	CAATTG	2 cut(s)	1200, 1455
MhlI	GDGCHC	4 cut(s)	285, 664, 1853, 2113
MlsI	TGGCCA	3 cut(s)	102, 628, 1626
MluNI	TGGCCA	3 cut(s)	102, 628, 1626
Mly113I	GGCGCC	1 cut(s)	459
MlyI	GAGTC	2 cut(s)	976, 1085
MmeI	TCCRAC	2 cut(s)	782, 2145
Mox20I	TGGCCA	3 cut(s)	102, 628, 1626
MroXI	GAANNNNTTC	1 cut(s)	429
MscI	TGGCCA	3 cut(s)	102, 628, 1626
MseI	TTAA	9 cut(s)	200, 393, 420, 498, 551, 1002, 1563, 1703, 1721
MslI	CAYNNNNRTG	5 cut(s)	796, 1583, 1762, 1958, 2094
Msp20I	TGGCCA	3 cut(s)	102, 628, 1626
MspA1I	CMGCKG	2 cut(s)	384, 614
MspCI	CTTAAG	1 cut(s)	1702
MspI	CCGG	2 cut(s)	143, 462
MspR9I	CCNGG	7 cut(s)	69, 405, 638, 759, 1491, 1536, 2216
MunI	CAATTG	2 cut(s)	1200, 1455
MvaI	CCWGG	7 cut(s)	69, 405, 638, 759, 1491, 1536, 2216
MwoI	GCNNNNNNNGC	8 cut(s)	305, 314, 331, 947, 1352, 1922, 2117, 2126
NarI	GGCGCC	1 cut(s)	459
NcoI	CCATGG	2 cut(s)	97, 926
NdeI	CATATG	2 cut(s)	1742, 1808
NdeII	GATC	3 cut(s)	181, 1123, 2025
NheI	GCTAGC	1 cut(s)	1912
NlaIV	GGNNCC	9 cut(s)	218, 324, 379, 380, 409, 460, 466, 1488, 1678
NmeAIII	GCCGAG	1 cut(s)	816
NmuCI	GTSAC	3 cut(s)	1587, 1597, 1841
NspI	RCATGY	3 cut(s)	431, 1211, 1963
PagI	TCATGA	1 cut(s)	43
PceI	AGGCCT	1 cut(s)	1925
PciI	ACATGT	2 cut(s)	427, 1207
PdmI	GAANNNNTTC	1 cut(s)	429
PfeI	GAWTC	1 cut(s)	20
PinAI	ACCGGT	1 cut(s)	142
PkrI	GCNGC	7 cut(s)	14, 336, 616, 737, 952, 1690, 1995
PleI	GAGTC	2 cut(s)	976, 1085
PluTI	GGCGCC	1 cut(s)	462
PpsI	GAGTC	2 cut(s)	976, 1085
Ppu21I	YACGTR	2 cut(s)	704, 1854
PpuMI	RGGWCCY	3 cut(s)	217, 378, 1133
PscI	ACATGT	2 cut(s)	427, 1207
PshAI	GACNNNNGTC	1 cut(s)	2175
Psp1406I	AACGTT	2 cut(s)	203, 417
Psp5II	RGGWCCY	3 cut(s)	217, 378, 1133
Psp6I	CCWGG	7 cut(s)	67, 403, 636, 757, 1489, 1534, 2214
PspFI	CCCAGC	2 cut(s)	384, 581
PspGI	CCWGG	7 cut(s)	67, 403, 636, 757, 1489, 1534, 2214
PspN4I	GGNNCC	9 cut(s)	218, 324, 379, 380, 409, 460, 466, 1488, 1678
PspPI	GGNCC	7 cut(s)	217, 378, 407, 684, 826, 1133, 1823
PspPPI	RGGWCCY	3 cut(s)	217, 378, 1133
PvuII	CAGCTG	1 cut(s)	614
RsaI	GTAC	9 cut(s)	272, 466, 599, 706, 974, 1206, 1304, 1526, 2142
RsaNI	GTAC	9 cut(s)	271, 465, 598, 705, 973, 1205, 1303, 1525, 2141
RseI	CAYNNNNRTG	5 cut(s)	796, 1583, 1762, 1958, 2094
SaqAI	TTAA	9 cut(s)	200, 393, 420, 498, 551, 1002, 1563, 1703, 1721
SatI	GCNGC	7 cut(s)	13, 335, 615, 736, 951, 1689, 1994
Sau3AI	GATC	3 cut(s)	181, 1123, 2025
Sau96I	GGNCC	7 cut(s)	217, 378, 407, 684, 826, 1133, 1823
SchI	GAGTC	2 cut(s)	976, 1085
ScrFI	CCNGG	7 cut(s)	69, 405, 638, 759, 1491, 1536, 2216
SduI	GDGCHC	4 cut(s)	285, 664, 1853, 2113
SexAI	ACCWGGT	1 cut(s)	636
SfaNI	GCATC	5 cut(s)	44, 765, 1105, 1284, 1786
SfoI	GGCGCC	1 cut(s)	460
SinI	GGWCC	4 cut(s)	217, 378, 1133, 1823
SmiMI	CAYNNNNRTG	5 cut(s)	796, 1583, 1762, 1958, 2094
SmlI	CTYRAG	1 cut(s)	1702
SmoI	CTYRAG	1 cut(s)	1702
SseBI	AGGCCT	1 cut(s)	1925
SsiI	CCGC	7 cut(s)	297, 306, 382, 897, 1194, 1994, 2006
SspDI	GGCGCC	1 cut(s)	458
SspI	AATATT	2 cut(s)	1379, 1836
SspMI	CTAG	5 cut(s)	221, 1421, 1827, 1880, 1913
StuI	AGGCCT	1 cut(s)	1925
StyD4I	CCNGG	7 cut(s)	67, 403, 636, 757, 1489, 1534, 2214
StyI	CCWWGG	7 cut(s)	97, 220, 687, 926, 1403, 1920, 2235
TaaI	ACNGT	8 cut(s)	166, 362, 469, 493, 654, 711, 1172, 1786
TaiI	ACGT	6 cut(s)	206, 420, 706, 948, 1503, 1856
TaqI	TCGA	2 cut(s)	1089, 1126
TaqII	GACCGA	1 cut(s)	1792
TatI	WGTACW	2 cut(s)	972, 1204
TauI	GCSGC	1 cut(s)	1996
TfiI	GAWTC	1 cut(s)	20
Tru1I	TTAA	9 cut(s)	200, 393, 420, 498, 551, 1002, 1563, 1703, 1721
Tru9I	TTAA	9 cut(s)	200, 393, 420, 498, 551, 1002, 1563, 1703, 1721
TscAI	CASTG	6 cut(s)	324, 657, 1474, 1513, 1767, 1791
TseFI	GTSAC	3 cut(s)	1587, 1597, 1841
TseI	GCWGC	6 cut(s)	12, 334, 614, 735, 950, 1688
Tsp45I	GTSAC	3 cut(s)	1587, 1597, 1841
TspDTI	ATGAA	7 cut(s)	60, 144, 718, 1211, 1649, 1960, 2122
TspGWI	ACGGA	1 cut(s)	13
TspRI	CASTG	6 cut(s)	324, 657, 1474, 1513, 1767, 1791
Vha464I	CTTAAG	1 cut(s)	1702
VpaK11BI	GGWCC	4 cut(s)	217, 378, 1133, 1823
XapI	RAATTY	3 cut(s)	136, 389, 1638
XceI	RCATGY	3 cut(s)	431, 1211, 1963
XcmI	CCANNNNNNNNNTGG	4 cut(s)	618, 820, 943, 1938
XmaJI	CCTAGG	1 cut(s)	220
XmiI	GTMKAC	2 cut(s)	471, 1698
XmnI	GAANNNNTTC	1 cut(s)	429
XspI	CTAG	5 cut(s)	221, 1421, 1827, 1880, 1913

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.