Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0001550

Physical Location & Seq

Genomic Coordinates Forward (+)

11723762 .. 11728198

Gene Structure 4437 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG131700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1701 bp

ATGAATAGTTTTATTCGAAACAAAGATGATTCGAGTCCTGAATTGTGTGCATTTTATGCATGTGTTTGTGTGAACAGAGCATTGCATGAGAAGGAGGAGAGGCCAAGAGGTGGATTGACAAGGAATCAGTTCTTCCTCATTGCTTTCACTTGCAGCTTTGCTTATTATGTTCTTCCGGGCTACTTATTCCCAATGTTATCTTCCCTTTCCTGGGTCTGCTGGATCTTCCCTGCTTCAGTTCTAGCCCATCAGCTAGGGTCAGGACTGCATGGTCTTGGGATCGGTGCTATCGGTCTCGATTGGTCCAGCATTTCCTCTTACCTTGGAAGCCCACTTGCCAGTCCATGGTTTGCTACTGCTAATGTTGCTGCTGGTTTTGCCCTTGTGATGTATGTCATTACTCCTGTGGCTTATTGGCTCAATGTGTATAAAGCAAAAACCTTCCCCATATTCTCGGATGGATTGTTCACGTCTACCGGCCAAAGCTACAACATTTCAGCTATAATAGACCCCAACTTCCGGCTTGACATTGAAGCATACGAGCGAGAGGGTCCTCTCCATATCAGTACCTTTTTTGCTATCAACTATGGTGTCAATTTTGCCTGCCTTACTGCCACTGTTGTTCATGTTCTCCTCTTCAATGGGAGAGACATCTGGGAGCTAAGCAAGTCTGCCTTCCAAGAGAAGAAGACAGATGTGCACACAAAGCTCATGAGAAGATATAAGCAAGTCCCTGGATGGTGGTTCGTATGTATCCTTGTGGCTAACATAGCCGCGACCATATTTACATGCCATTATTACAACGACCAATTGCAATTGCAATGGTGGGGGGTCTTGCTTGCTTGTGGTCTAGCCTTGTTTTTCACTCTACCTGTTGGAGTCATTTATGCCACAACCAATCAGATGCCAACTTTGAATGTGATCACAGAGTACATAATTGGGTATCTGTATCCGGGATATCCAGCTGCTAACATATTATTCAAAGTATATGGACACATAAGCATGAAACAAGGAATCAATTTTCTTGAAGACTTCAAGCTTGGACACTACATGAAGATTGCTCCTCGAGCAATGTTCATGGCACAGGTAGTTGGTACTATCATAGCAGCACTTGTGCATTTGGGAACTGCATGGTGGCTTATGAGCACAATCCCTGACATATGCGACAGGGCGTTACTACCAGCAGAGAGCCCATGGACTTGCCCCGGTGACCATGTCTTCTACGATGCTTCCGTTATCTGGGGCCTTGTCGGGCCTCGCAGAATCTTTGGGGACCTTGGCTACTATTCGGCTATCAACTGGTTTTTCTTAGCTGGGGCTATAGCTCCTGCCCTTGTTTGGCTTGCACACAAGACCTTCCCAACCAAACAATGGATTAGACTTATTACAATGCCTGTGCTCTTAGGGACAGTAGTCAACATGCCTCCAGCTACTGCTGTGAATTTCACTAGCTGGATCCTCATTGGATTCGCCTCAGGCTTTGTTGCTTACAGGTACTACCGCGGCTGGTGGAGCCGTCATAACTATGTGCTATCTGGAGCTCTGGATGCTGGATTAGCCTTTATGGCGGTAATTTTGTACTTGTGTCTAGGGATGCAACATGTCCACTTAAAATGGTGGGGAAGTACGCCGGATGGTTGCCCGTTGGCTTCTTGCTCAACGGAGCCAGGTGTTCTGATTAAGGGCTGTCCATTGATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006857 GO:0008150 GO:0015833 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0031226 GO:0035672 GO:0035673 GO:0042886 GO:0042887 GO:0044425 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OPT

Protein Analysis

566

Amino Acids

63.25

Weight (kDa)

8.39

Isoelectric Point (pI)

44.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
OPT	PF03169	20 - 529	1.3e-126	OPT oligopeptide transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001550)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G10770 AT4G10770
fragaria_vesca	FvH4_1g11690 FvH4_1g11690 FvH4_1g11690 FvH4_1g11690 FvH4_1g11690 FvH4_5g11060 FvH4_5g11060 FvH4_5g11060 FvH4_5g11060 FvH4_5g11060
malus_domestica	MD02G1129900.v1.1 MD06G1116800.v1.1 MD14G1124200.v1.1
prunus_persica	Prupe.5G128100_v2.0.a1 Prupe.5G128100_v2.0.a1 Prupe.5G128100_v2.0.a1 Prupe.5G128100_v2.0.a1 Prupe.7G169800_v2.0.a1 Prupe.7G169800_v2.0.a1 Prupe.7G169800_v2.0.a1
pyrus_communis	pycom02g10180 pycom06g10890 pycom14g11000
rosa_chinensis	RchiOBHm_Chr2g0099261 RchiOBHm_Chr7g0186741
rosa_laevigata	RLG00000004820 RLG00000016866
rosa_multiflora	Rmu_co8201022.1_g000001 Rmu_co8437885.1_g000001 Rmu_co8448977.1_g000001 Rmu_sc0009734.1_g000005
rosa_roxburghii	Rroxscaffold_2G00143270 Rroxscaffold_3G00267870
rosa_rugosa	Rorug02G0078300 Rorug02G0078300 Rorug02G0078300 Rorug06G0476200 Rorug06G0476300
rosa_samantha	Rh2AG127500 Rh2BG130500 Rh2CG131700 Rh2DG132100 Rh7AG064300 Rh7BG080800 Rh7CG083200 Rh7DG084100
rosa_wichuraiana	Rw2G009840 Rw7G007210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	270
AccB7I	CCANNNNNTGG	3 cut(s)	110, 345, 1371
AccI	GTMKAC	1 cut(s)	473
AccII	CGCG	2 cut(s)	776, 1503
AciI	CCGC	4 cut(s)	774, 1501, 1503, 1568
AclWI	GGATC	4 cut(s)	230, 287, 1450, 1463
AcoI	YGGCCR	1 cut(s)	478
AcsI	RAATTY	1 cut(s)	1441
AcuI	CTGAAG	1 cut(s)	219
AfaI	GTAC	6 cut(s)	568, 932, 1096, 1496, 1580, 1627
AfiI	CCNNNNNNNGG	8 cut(s)	110, 210, 211, 345, 519, 1239, 1338, 1371
AflIII	ACRYGT	1 cut(s)	1600
AgsI	TTSAA	6 cut(s)	533, 640, 916, 982, 1028, 1036
AjiI	CACGTC	1 cut(s)	471
AjnI	CCWGG	3 cut(s)	209, 733, 1666
AjuI	GAANNNNNNNTTGG	2 cut(s)	184, 216
AloI	GAACNNNNNNTCC	2 cut(s)	449, 481
Alw21I	GWGCWC	4 cut(s)	702, 1148, 1401, 1543
Alw26I	GTCTC	2 cut(s)	299, 642
Alw44I	GTGCAC	1 cut(s)	698
AlwI	GGATC	4 cut(s)	230, 287, 1450, 1463
AlwNI	CAGNNNCTG	1 cut(s)	1433
Ama87I	CYCGRG	1 cut(s)	1065
AoxI	GGCC	4 cut(s)	101, 478, 1243, 1253
ApaLI	GTGCAC	1 cut(s)	698
ApeKI	GCWGC	4 cut(s)	153, 368, 965, 1106
ApoI	RAATTY	1 cut(s)	1441
Asp700I	GAANNNNTTC	1 cut(s)	128
AspS9I	GGNCC	5 cut(s)	303, 551, 1243, 1253, 1273
AsuC2I	CCSGG	3 cut(s)	177, 954, 1206
AsuHPI	GGTGA	1 cut(s)	1220
AsuII	TTCGAA	1 cut(s)	16
AvaI	CYCGRG	1 cut(s)	1065
AvaII	GGWCC	3 cut(s)	303, 551, 1273
AxyI	CCTNAGG	1 cut(s)	1474
BaeGI	GKGCMC	1 cut(s)	702
BamHI	GGATCC	1 cut(s)	1455
BanII	GRGCYC	2 cut(s)	1193, 1543
BbsI	GAAGAC	3 cut(s)	695, 1035, 1210
Bbv12I	GWGCWC	4 cut(s)	702, 1148, 1401, 1543
BbvI	GCAGC	4 cut(s)	165, 355, 952, 1118
BccI	CCATC	4 cut(s)	255, 452, 732, 1628
BceAI	ACGGC	1 cut(s)	1500
BciT130I	CCWGG	3 cut(s)	211, 735, 1668
BciVI	GTATCC	2 cut(s)	764, 960
BclI	TGATCA	1 cut(s)	921
BcnI	CCSGG	3 cut(s)	177, 954, 1206
BcoDI	GTCTC	2 cut(s)	299, 642
BfaI	CTAG	5 cut(s)	242, 254, 851, 1449, 1589
BfmI	CTRYAG	1 cut(s)	1320
BfuI	GTATCC	2 cut(s)	764, 960
BglI	GCCNNNNNGGC	1 cut(s)	1565
BisI	GCNGC	6 cut(s)	154, 369, 774, 966, 1107, 1504
BlpI	GCTNAGC	1 cut(s)	662
BlsI	GCNGC	6 cut(s)	155, 370, 775, 967, 1108, 1505
Bme1390I	CCNGG	6 cut(s)	177, 211, 735, 954, 1206, 1668
Bme18I	GGWCC	3 cut(s)	303, 551, 1273
BmeT110I	CYCGRG	1 cut(s)	1065
BmgBI	CACGTC	1 cut(s)	471
BmgT120I	GGNCC	5 cut(s)	303, 551, 1243, 1253, 1273
BmiI	GGNNCC	6 cut(s)	552, 1244, 1274, 1457, 1514, 1665
BmrFI	CCNGG	6 cut(s)	177, 211, 735, 954, 1206, 1668
BmsI	GCATC	4 cut(s)	894, 1216, 1537, 1584
BoxI	GACNNNNGTC	1 cut(s)	1412
BpiI	GAAGAC	3 cut(s)	695, 1035, 1210
BpmI	CTGGAG	2 cut(s)	1410, 1557
Bpu1102I	GCTNAGC	1 cut(s)	662
Bpu14I	TTCGAA	1 cut(s)	16
BpuMI	CCSGG	3 cut(s)	177, 954, 1206
BsaI	GGTCTC	1 cut(s)	299
BsaJI	CCNNGG	8 cut(s)	210, 322, 344, 733, 1193, 1204, 1276, 1501
Bsc4I	CCNNNNNNNGG	8 cut(s)	110, 210, 211, 345, 519, 1239, 1338, 1371
Bse118I	RCCGGY	1 cut(s)	476
Bse1I	ACTGG	2 cut(s)	339, 1304
Bse21I	CCTNAGG	1 cut(s)	1474
Bse3DI	GCAATG	4 cut(s)	80, 138, 827, 1077
BseBI	CCWGG	3 cut(s)	211, 735, 1668
BseDI	CCNNGG	8 cut(s)	210, 322, 344, 733, 1193, 1204, 1276, 1501
BseGI	GGATG	5 cut(s)	463, 743, 1552, 1599, 1639
BseLI	CCNNNNNNNGG	8 cut(s)	110, 210, 211, 345, 519, 1239, 1338, 1371
BseMI	GCAATG	4 cut(s)	80, 138, 827, 1077
BseMII	CTCAG	1 cut(s)	1488
BseNI	ACTGG	2 cut(s)	339, 1304
BseRI	GAGGAG	3 cut(s)	110, 623, 1053
BseSI	GKGCMC	1 cut(s)	702
BseXI	GCAGC	4 cut(s)	165, 355, 952, 1118
BseYI	CCCAGC	1 cut(s)	1313
Bsh1236I	CGCG	2 cut(s)	776, 1503
BshFI	GGCC	4 cut(s)	103, 480, 1245, 1255
BsiHKAI	GWGCWC	4 cut(s)	702, 1148, 1401, 1543
BsiHKCI	CYCGRG	1 cut(s)	1065
BsiSI	CCGG	6 cut(s)	176, 477, 520, 953, 1206, 1631
BslFI	GGGAC	3 cut(s)	716, 1286, 1420
BslI	CCNNNNNNNGG	8 cut(s)	110, 210, 211, 345, 519, 1239, 1338, 1371
BsmAI	GTCTC	2 cut(s)	299, 642
BsmFI	GGGAC	3 cut(s)	716, 1286, 1420
BsnI	GGCC	4 cut(s)	103, 480, 1245, 1255
Bso31I	GGTCTC	1 cut(s)	299
BsoBI	CYCGRG	1 cut(s)	1065
Bsp119I	TTCGAA	1 cut(s)	16
Bsp1286I	GDGCHC	5 cut(s)	702, 1148, 1193, 1401, 1543
Bsp143I	GATC	4 cut(s)	222, 279, 921, 1455
Bsp1720I	GCTNAGC	1 cut(s)	662
Bsp19I	CCATGG	2 cut(s)	344, 1193
BspACI	CCGC	4 cut(s)	774, 1501, 1503, 1568
BspANI	GGCC	4 cut(s)	103, 480, 1245, 1255
BspCNI	CTCAG	1 cut(s)	1487
BspFNI	CGCG	2 cut(s)	776, 1503
BspHI	TCATGA	1 cut(s)	711
BspLI	GGNNCC	6 cut(s)	552, 1244, 1274, 1457, 1514, 1665
BspPI	GGATC	4 cut(s)	230, 287, 1450, 1463
BspT104I	TTCGAA	1 cut(s)	16
BspTNI	GGTCTC	1 cut(s)	299
BsrDI	GCAATG	4 cut(s)	80, 138, 827, 1077
BsrFI	RCCGGY	1 cut(s)	476
BsrI	ACTGG	2 cut(s)	339, 1304
BssAI	RCCGGY	1 cut(s)	476
BssECI	CCNNGG	8 cut(s)	210, 322, 344, 733, 1193, 1204, 1276, 1501
BssMI	GATC	4 cut(s)	222, 279, 921, 1455
BssT1I	CCWWGG	4 cut(s)	322, 344, 1193, 1276
Bst2UI	CCWGG	3 cut(s)	211, 735, 1668
Bst4CI	ACNGT	2 cut(s)	619, 1411
Bst6I	CTCTTC	1 cut(s)	641
BstAPI	GCANNNNNTGC	1 cut(s)	56
BstBI	TTCGAA	1 cut(s)	16
BstC8I	GCNNGC	3 cut(s)	604, 840, 1344
BstDEI	CTNAG	4 cut(s)	662, 1309, 1402, 1474
BstDSI	CCRYGG	3 cut(s)	344, 1193, 1501
BstEII	GGTNACC	1 cut(s)	1208
BstF5I	GGATG	5 cut(s)	463, 743, 1552, 1599, 1639
BstFNI	CGCG	2 cut(s)	776, 1503
BstKTI	GATC	4 cut(s)	225, 282, 924, 1458
BstMAI	GTCTC	2 cut(s)	299, 642
BstMBI	GATC	4 cut(s)	222, 279, 921, 1455
BstNI	CCWGG	3 cut(s)	211, 735, 1668
BstNSI	RCATGY	4 cut(s)	63, 792, 1423, 1604
BstPAI	GACNNNNGTC	1 cut(s)	1412
BstPI	GGTNACC	1 cut(s)	1208
BstSCI	CCNGG	6 cut(s)	175, 209, 733, 952, 1204, 1666
BstSFI	CTRYAG	1 cut(s)	1320
BstSLI	GKGCMC	1 cut(s)	702
BstUI	CGCG	2 cut(s)	776, 1503
BstV1I	GCAGC	4 cut(s)	165, 355, 952, 1118
BstV2I	GAAGAC	3 cut(s)	695, 1035, 1210
BstX2I	RGATCY	2 cut(s)	222, 1455
BstYI	RGATCY	2 cut(s)	222, 1455
Bsu36I	CCTNAGG	1 cut(s)	1474
BsuI	GTATCC	2 cut(s)	764, 960
BsuRI	GGCC	4 cut(s)	103, 480, 1245, 1255
BtgI	CCRYGG	3 cut(s)	344, 1193, 1501
BtrI	CACGTC	1 cut(s)	471
BtsCI	GGATG	5 cut(s)	463, 743, 1552, 1599, 1639
BtsIMutI	CAGTG	1 cut(s)	615
Cac8I	GCNNGC	3 cut(s)	604, 840, 1344
CaiI	CAGNNNCTG	1 cut(s)	1433
CciI	TCATGA	1 cut(s)	711
Cfr10I	RCCGGY	1 cut(s)	476
Cfr13I	GGNCC	5 cut(s)	303, 551, 1243, 1253, 1273
Cfr42I	CCGCGG	1 cut(s)	1504
Csp6I	GTAC	6 cut(s)	567, 931, 1095, 1495, 1579, 1626
CviQI	GTAC	6 cut(s)	567, 931, 1095, 1495, 1579, 1626
DdeI	CTNAG	4 cut(s)	662, 1309, 1402, 1474
DpnI	GATC	4 cut(s)	224, 281, 923, 1457
DpnII	GATC	4 cut(s)	222, 279, 921, 1455
DrdI	GACNNNNNNGTC	1 cut(s)	270
DseDI	GACNNNNNNGTC	1 cut(s)	270
EaeI	YGGCCR	1 cut(s)	478
Eam1104I	CTCTTC	1 cut(s)	641
EarI	CTCTTC	1 cut(s)	641
Ecl136II	GAGCTC	1 cut(s)	1541
Eco130I	CCWWGG	4 cut(s)	322, 344, 1193, 1276
Eco24I	GRGCYC	2 cut(s)	1193, 1543
Eco31I	GGTCTC	1 cut(s)	299
Eco32I	GATATC	1 cut(s)	959
Eco47I	GGWCC	3 cut(s)	303, 551, 1273
Eco53kI	GAGCTC	1 cut(s)	1541
Eco57I	CTGAAG	1 cut(s)	219
Eco81I	CCTNAGG	1 cut(s)	1474
Eco88I	CYCGRG	1 cut(s)	1065
Eco91I	GGTNACC	1 cut(s)	1208
EcoICRI	GAGCTC	1 cut(s)	1541
EcoO109I	RGGNCCY	3 cut(s)	551, 1243, 1273
EcoO65I	GGTNACC	1 cut(s)	1208
EcoRII	CCWGG	3 cut(s)	209, 733, 1666
EcoRV	GATATC	1 cut(s)	959
EcoT14I	CCWWGG	4 cut(s)	322, 344, 1193, 1276
EcoT22I	ATGCAT	1 cut(s)	61
EcoT38I	GRGCYC	2 cut(s)	1193, 1543
ErhI	CCWWGG	4 cut(s)	322, 344, 1193, 1276
FalI	AAGNNNNNCTT	2 cut(s)	659, 691
FaqI	GGGAC	3 cut(s)	716, 1286, 1420
FauNDI	CATATG	1 cut(s)	1160
FbaI	TGATCA	1 cut(s)	921
FblI	GTMKAC	1 cut(s)	473
Fnu4HI	GCNGC	6 cut(s)	154, 369, 774, 966, 1107, 1504
FokI	GGATG	5 cut(s)	470, 750, 1559, 1606, 1646
FriOI	GRGCYC	2 cut(s)	1193, 1543
Fsp4HI	GCNGC	6 cut(s)	154, 369, 774, 966, 1107, 1504
FspBI	CTAG	5 cut(s)	242, 254, 851, 1449, 1589
GluI	GCNGC	6 cut(s)	154, 369, 774, 966, 1107, 1504
GsaI	CCCAGC	1 cut(s)	1317
GsuI	CTGGAG	2 cut(s)	1410, 1557
HaeIII	GGCC	4 cut(s)	103, 480, 1245, 1255
HapII	CCGG	6 cut(s)	176, 477, 520, 953, 1206, 1631
HincII	GTYRAC	1 cut(s)	1417
HindII	GTYRAC	1 cut(s)	1417
HindIII	AAGCTT	1 cut(s)	1037
HinfI	GANTC	7 cut(s)	29, 34, 124, 879, 1014, 1263, 1467
HpaII	CCGG	6 cut(s)	176, 477, 520, 953, 1206, 1631
HphI	GGTGA	1 cut(s)	1220
Hpy166II	GTNNAC	6 cut(s)	73, 468, 474, 700, 1417, 1606
Hpy188I	TCNGA	3 cut(s)	457, 903, 1677
Hpy188III	TCNNGA	7 cut(s)	38, 261, 296, 712, 1025, 1536, 1544
Hpy8I	GTNNAC	6 cut(s)	73, 468, 474, 700, 1417, 1606
HpyAV	CCTTC	4 cut(s)	85, 451, 685, 1366
HpyCH4III	ACNGT	2 cut(s)	619, 1411
HpyCH4IV	ACGT	1 cut(s)	470
HpyF3I	CTNAG	4 cut(s)	662, 1309, 1402, 1474
HpySE526I	ACGT	1 cut(s)	470
Ksp22I	TGATCA	1 cut(s)	921
KspI	CCGCGG	1 cut(s)	1504
Kzo9I	GATC	4 cut(s)	222, 279, 921, 1455
LmnI	GCTCC	6 cut(s)	658, 1066, 1330, 1512, 1538, 1663
Lsp1109I	GCAGC	4 cut(s)	165, 355, 952, 1118
LweI	GCATC	4 cut(s)	894, 1216, 1537, 1584
MaeI	CTAG	5 cut(s)	242, 254, 851, 1449, 1589
MaeII	ACGT	1 cut(s)	470
MaeIII	GTNAC	2 cut(s)	1173, 1208
MalI	GATC	4 cut(s)	224, 281, 923, 1457
MboI	GATC	4 cut(s)	222, 279, 921, 1455
MfeI	CAATTG	2 cut(s)	809, 815
MflI	RGATCY	2 cut(s)	222, 1455
MhlI	GDGCHC	5 cut(s)	702, 1148, 1193, 1401, 1543
MluCI	AATT	8 cut(s)	41, 595, 809, 815, 936, 1018, 1441, 1572
MlyI	GAGTC	2 cut(s)	43, 888
MmeI	TCCRAC	1 cut(s)	856
Mph1103I	ATGCAT	1 cut(s)	61
MroXI	GAANNNNTTC	1 cut(s)	128
MseI	TTAA	2 cut(s)	1610, 1680
MslI	CAYNNNNRTG	3 cut(s)	1001, 1524, 1696
MspA1I	CMGCKG	2 cut(s)	965, 1503
MspI	CCGG	6 cut(s)	176, 477, 520, 953, 1206, 1631
MspR9I	CCNGG	6 cut(s)	177, 211, 735, 954, 1206, 1668
MunI	CAATTG	2 cut(s)	809, 815
MvaI	CCWGG	3 cut(s)	211, 735, 1668
MvnI	CGCG	2 cut(s)	776, 1503
NciI	CCSGG	3 cut(s)	177, 954, 1206
NcoI	CCATGG	2 cut(s)	344, 1193
NdeI	CATATG	1 cut(s)	1160
NdeII	GATC	4 cut(s)	222, 279, 921, 1455
NlaIV	GGNNCC	6 cut(s)	552, 1244, 1274, 1457, 1514, 1665
NmuCI	GTSAC	1 cut(s)	1208
NsiI	ATGCAT	1 cut(s)	61
NspI	RCATGY	4 cut(s)	63, 792, 1423, 1604
NspV	TTCGAA	1 cut(s)	16
PaeR7I	CTCGAG	1 cut(s)	1065
PagI	TCATGA	1 cut(s)	711
PciI	ACATGT	1 cut(s)	1600
PcsI	WCGNNNNNNNCGW	1 cut(s)	1230
PdmI	GAANNNNTTC	1 cut(s)	128
PfeI	GAWTC	5 cut(s)	29, 124, 1014, 1263, 1467
PflFI	GACNNNGTC	1 cut(s)	1214
PflMI	CCANNNNNTGG	3 cut(s)	110, 345, 1371
PfoI	TCCNGGA	1 cut(s)	952
PkrI	GCNGC	6 cut(s)	155, 370, 775, 967, 1108, 1505
PleI	GAGTC	2 cut(s)	42, 887
PpsI	GAGTC	2 cut(s)	42, 887
PpuMI	RGGWCCY	2 cut(s)	551, 1273
PscI	ACATGT	1 cut(s)	1600
PshAI	GACNNNNGTC	1 cut(s)	1412
Psp124BI	GAGCTC	1 cut(s)	1543
Psp5II	RGGWCCY	2 cut(s)	551, 1273
Psp6I	CCWGG	3 cut(s)	209, 733, 1666
PspEI	GGTNACC	1 cut(s)	1208
PspFI	CCCAGC	1 cut(s)	1313
PspGI	CCWGG	3 cut(s)	209, 733, 1666
PspN4I	GGNNCC	6 cut(s)	552, 1244, 1274, 1457, 1514, 1665
PspPI	GGNCC	5 cut(s)	303, 551, 1243, 1253, 1273
PspPPI	RGGWCCY	2 cut(s)	551, 1273
PspXI	VCTCGAGB	1 cut(s)	1065
PstNI	CAGNNNCTG	1 cut(s)	1433
PsuI	RGATCY	2 cut(s)	222, 1455
PsyI	GACNNNGTC	1 cut(s)	1214
PvuII	CAGCTG	1 cut(s)	965
RsaI	GTAC	6 cut(s)	568, 932, 1096, 1496, 1580, 1627
RsaNI	GTAC	6 cut(s)	567, 931, 1095, 1495, 1579, 1626
RseI	CAYNNNNRTG	3 cut(s)	1001, 1524, 1696
SacI	GAGCTC	1 cut(s)	1543
SacII	CCGCGG	1 cut(s)	1504
SaqAI	TTAA	2 cut(s)	1610, 1680
SatI	GCNGC	6 cut(s)	154, 369, 774, 966, 1107, 1504
Sau3AI	GATC	4 cut(s)	222, 279, 921, 1455
Sau96I	GGNCC	5 cut(s)	303, 551, 1243, 1253, 1273
SchI	GAGTC	2 cut(s)	43, 888
ScrFI	CCNGG	6 cut(s)	177, 211, 735, 954, 1206, 1668
SduI	GDGCHC	5 cut(s)	702, 1148, 1193, 1401, 1543
SfaNI	GCATC	4 cut(s)	894, 1216, 1537, 1584
SfcI	CTRYAG	1 cut(s)	1320
Sfr274I	CTCGAG	1 cut(s)	1065
Sfr303I	CCGCGG	1 cut(s)	1504
SfuI	TTCGAA	1 cut(s)	16
SgrBI	CCGCGG	1 cut(s)	1504
SinI	GGWCC	3 cut(s)	303, 551, 1273
SlaI	CTCGAG	1 cut(s)	1065
SmiMI	CAYNNNNRTG	3 cut(s)	1001, 1524, 1696
SmlI	CTYRAG	1 cut(s)	1065
SmoI	CTYRAG	1 cut(s)	1065
Sse9I	AATT	8 cut(s)	41, 595, 809, 815, 936, 1018, 1441, 1572
SsiI	CCGC	4 cut(s)	774, 1501, 1503, 1568
SspMI	CTAG	5 cut(s)	242, 254, 851, 1449, 1589
SstI	GAGCTC	1 cut(s)	1543
StyD4I	CCNGG	6 cut(s)	175, 209, 733, 952, 1204, 1666
StyI	CCWWGG	4 cut(s)	322, 344, 1193, 1276
TaaI	ACNGT	2 cut(s)	619, 1411
TaiI	ACGT	1 cut(s)	473
TaqI	TCGA	4 cut(s)	16, 32, 297, 1066
TaqII	GACCGA	1 cut(s)	281
TasI	AATT	8 cut(s)	41, 595, 809, 815, 936, 1018, 1441, 1572
TatI	WGTACW	2 cut(s)	930, 1578
TauI	GCSGC	2 cut(s)	776, 1506
TfiI	GAWTC	5 cut(s)	29, 124, 1014, 1263, 1467
Tru1I	TTAA	2 cut(s)	1610, 1680
Tru9I	TTAA	2 cut(s)	1610, 1680
TscAI	CASTG	1 cut(s)	622
TseFI	GTSAC	1 cut(s)	1208
TseI	GCWGC	4 cut(s)	153, 368, 965, 1106
Tsp45I	GTSAC	1 cut(s)	1208
TspDTI	ATGAA	5 cut(s)	17, 614, 1019, 1066, 1067
TspGWI	ACGGA	2 cut(s)	1222, 1676
TspRI	CASTG	1 cut(s)	622
Tth111I	GACNNNGTC	1 cut(s)	1214
Van91I	CCANNNNNTGG	3 cut(s)	110, 345, 1371
VneI	GTGCAC	1 cut(s)	698
VpaK11BI	GGWCC	3 cut(s)	303, 551, 1273
XapI	RAATTY	1 cut(s)	1441
XceI	RCATGY	4 cut(s)	63, 792, 1423, 1604
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1368
XhoI	CTCGAG	1 cut(s)	1065
XmiI	GTMKAC	1 cut(s)	473
XmnI	GAANNNNTTC	1 cut(s)	128
XspI	CTAG	5 cut(s)	242, 254, 851, 1449, 1589
Zsp2I	ATGCAT	1 cut(s)	61

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.