Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0001550

Physical Location & Seq

Genomic Coordinates Forward (+)

10477069 .. 10481499

Gene Structure 4431 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1129900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2208 bp

ATGACCGGCGGCAGCGGCCACGAAATCGCAGCTCCTCTCATTCCGAAGACTCAATACGATGCCTCCGCCTCATCTCCGCCGCCGGCGGACGAGAACTCTCCGATCGAGCAAGTCGCCCTCACCGTTCCGGTCACCGACGATCCCTCCCTCCCGACCGTCACTTTCAGGACATGGACGCTCGGAGCCCTCGCGTGCGTTCTACTCTCCTTCCTCAACCAGTTCTTCTGGTACCGCCGCGAGCCCCTCTCGCTCACCTCGATCTCCGCTCAGATTGCGGTGGTCCCGCTCGGCCACCTCATGGCGTCGCTGATCACGGATCGAGTTTTCTTCAAGGGGCGAAAATGGGAATTCACGCTCAATCCGGGACCCTTCAATGTGAAGGAGCACGTGCTCATCACCATCTTCGCCAACTCCGGAGCTGGGAACGTCTACGCCATCCATATCGTGAGCGCGGTTAAGATCTTTTACAAGAAGAACCTGTCGTTTTTCGTTGCGCTGCTTGTCGTTTTGACTACTCAGGTGTTGGGGTTCGGGTGGGCCGGGCTGTTCCGGCGGTACTTGGTGGAGCCCGCCGCAATGTGGTGGCCTCAAAATCTCGTTCAGGTTTCGCTCTTCAGGGCACTGCATGAGAAAGAAGAGAGGCCAAAGGGTGGATTAACAAGAAACCAGTTCTTCCTCATTGCCTTCACTTGCAGCTTCGCTTACTATGTCCTTCCCGGTTACTTATTCCCAATGCTAACTTCCCTTTCCTGGATCTGCTGGATTTTCCCTAGTTCCATCCTGGCTCATCAGCTCGGTTCAGGACTGCACGGTCTTGGCATCGGTGCTATTGGCCTCGATTGGTCAAGTATATCCTCTTACCTCGGGAGCCCACTTGCCAGTCCGTGGTTCGCTACTGCCAATATTGCTGCTGGTTTTTTCCTTGTGATGTATGTCATTACTCCTGTGACTTATTGGCTCAATGTATATAATGCCAAAACTTTTCCCATATTCTCGGATGATCTGTTCACATCTACTGGCCAAAGCTACAACATATCAGCTATTATAGATTCCAACTTCCGCCTTGACATTAATGCATACGAGGGAGAGGGCCCCCTCTATATGAGCACCTTCTTTGCTATCTATTATGGCATCAATTTTGCCTGCCTTACTGCCACTATTGTTCATGTTCTCCTCTTTAATGGGAGAGACATCTGGCAGCTAAGCAAGTCTGCCATCAACGAGAACAAGATGGATGTGCACACAAAGCTCATGAGAAAATATAAGCAAGTTCCTGGATGGTGGTTCATGTGCATCCTTTTGGCTAACATAACCGCAACCCTATTTACTTGCCATTATTACAATTATCAACTACAACTGCAATGGTGGGGTGTCTTGCTTGCTTGTGGTCTTGCCTTGTTTTTCACTCTTCCTATTGGAGTCATCAATGCCACAACAAATCAGATGCCAGCGTTGAATGTGATCACAGAGTACATCATCGGGTATCTGTATCCAGGATATCCAGTTGCCAACATATTGTTCAAAGTTTATGGATACATAAGCATGAAGCAGGCCATCGCATTCCTGGAAGACTTCAAGCTTGGGCACTACATGAAAATTCCTCCCAGAGCAATGTTCATGGCACAGGTAGTTGGTACTGTTATAGCAGCGTTCGTCCATTTAGGAACTGCCTGGTGGCTTATGAGCACAGTCCCAGACATATGTGATAGGGCATTACTACCATCAGACAGTCCATGGACTTGCCCGGGCGACCATGTCTTCTACGATGCTTCTGTTATTTGGGGTCTTGTCGGGCCTCGCAGAATATTTGGTAATCTTGGCCACTATTCCACCATCAACTGGTTTTTCTTAGCTGGTGCTATAGCTCCTGTCCCAGTTTGGCTTGCTCACAAAGCCTTCCCAAGCAAACATTGGATTAAACTTATCACCATGCCGGTGCTCTTTGGGGCAACAGTTAACATGCCTCCGGCTACTGCTGTCAACTACACCAGCTGGATTCTCATTGGATTCGCATCAGGGTTTATCGCTTACAGGTATTATCGCGCCTTGTGGAGTCGCCACAACTACGTGCTATCTGGAGCTCTGGACGCCGGATTAGCGTTTATGGGGGTACTTTTGTACTTGTGTCTGGGGATGGAACATGTTAGCTTGAAATGGTGGGGAAGCAGTCCAGATGGTTGTCCTTTGGCTTCTTCCTCAACAGCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006857 GO:0008150 GO:0015833 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0031226 GO:0035672 GO:0035673 GO:0042886 GO:0042887 GO:0044425 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OPT

Protein Analysis

736

Amino Acids

82.0

Weight (kDa)

8.66

Isoelectric Point (pI)

41.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
OPT	PF03169	53 - 709	1.9e-170	OPT oligopeptide transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001550)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G10770 AT4G10770
fragaria_vesca	FvH4_1g11690 FvH4_1g11690 FvH4_1g11690 FvH4_1g11690 FvH4_1g11690 FvH4_5g11060 FvH4_5g11060 FvH4_5g11060 FvH4_5g11060 FvH4_5g11060
malus_domestica	MD02G1129900.v1.1 MD06G1116800.v1.1 MD14G1124200.v1.1
prunus_persica	Prupe.5G128100_v2.0.a1 Prupe.5G128100_v2.0.a1 Prupe.5G128100_v2.0.a1 Prupe.5G128100_v2.0.a1 Prupe.7G169800_v2.0.a1 Prupe.7G169800_v2.0.a1 Prupe.7G169800_v2.0.a1
pyrus_communis	pycom02g10180 pycom06g10890 pycom14g11000
rosa_chinensis	RchiOBHm_Chr2g0099261 RchiOBHm_Chr7g0186741
rosa_laevigata	RLG00000004820 RLG00000016866
rosa_multiflora	Rmu_co8201022.1_g000001 Rmu_co8437885.1_g000001 Rmu_co8448977.1_g000001 Rmu_sc0009734.1_g000005
rosa_roxburghii	Rroxscaffold_2G00143270 Rroxscaffold_3G00267870
rosa_rugosa	Rorug02G0078300 Rorug02G0078300 Rorug02G0078300 Rorug06G0476200 Rorug06G0476300
rosa_samantha	Rh2AG127500 Rh2BG130500 Rh2CG131700 Rh2DG132100 Rh7AG064300 Rh7BG080800 Rh7CG083200 Rh7DG084100
rosa_wichuraiana	Rw2G009840 Rw7G007210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	810
Acc65I	GGTACC	1 cut(s)	228
AccB1I	GGYRCC	1 cut(s)	228
AccB7I	CCANNNNNTGG	4 cut(s)	298, 650, 885, 1839
AccBSI	CCGCTC	2 cut(s)	266, 286
AccI	GTMKAC	1 cut(s)	429
AccII	CGCG	4 cut(s)	191, 237, 452, 2043
AccIII	TCCGGA	1 cut(s)	413
AclWI	GGATC	3 cut(s)	134, 324, 761
AcoI	YGGCCR	4 cut(s)	16, 289, 1018, 1819
AcsI	RAATTY	2 cut(s)	347, 1596
AcuI	CTGAAG	1 cut(s)	598
AcvI	CACGTG	1 cut(s)	388
AcyI	GRCGYC	2 cut(s)	302, 2088
AfaI	GTAC	6 cut(s)	230, 557, 1472, 1636, 2112, 2120
AfiI	CCNNNNNNNGG	7 cut(s)	298, 420, 579, 650, 750, 885, 1839
AflIII	ACRYGT	1 cut(s)	2140
AgsI	TTSAA	6 cut(s)	331, 373, 1456, 1522, 1576, 2152
AjnI	CCWGG	6 cut(s)	749, 780, 1273, 1492, 1563, 1670
AjuI	GAANNNNNNNTTGG	4 cut(s)	724, 756, 1502, 1534
AloI	GAACNNNNNNTCC	2 cut(s)	989, 1021
Alw21I	GWGCWC	7 cut(s)	387, 393, 1109, 1242, 1688, 1941, 2083
Alw26I	GTCTC	1 cut(s)	1182
Alw44I	GTGCAC	1 cut(s)	1238
AlwI	GGATC	3 cut(s)	134, 324, 761
Ama87I	CYCGRG	2 cut(s)	863, 1744
Aor13HI	TCCGGA	1 cut(s)	413
ApaI	GGGCCC	1 cut(s)	1094
ApaLI	GTGCAC	1 cut(s)	1238
ApeKI	GCWGC	7 cut(s)	12, 29, 496, 693, 908, 1198, 1646
ApoI	RAATTY	2 cut(s)	347, 1596
AseI	ATTAAT	1 cut(s)	1071
Asp718I	GGTACC	1 cut(s)	228
AspLEI	GCGC	3 cut(s)	452, 496, 2045
AspS9I	GGNCC	6 cut(s)	280, 365, 537, 1090, 1091, 1793
AsuC2I	CCSGG	5 cut(s)	363, 541, 717, 1745, 1746
AsuHPI	GGTGA	5 cut(s)	112, 124, 244, 388, 1918
AvaI	CYCGRG	2 cut(s)	863, 1744
AvaII	GGWCC	2 cut(s)	280, 365
BaeGI	GKGCMC	4 cut(s)	622, 1094, 1242, 1587
BaeI	ACNNNNGTAYC	2 cut(s)	2102, 2135
BalI	TGGCCA	2 cut(s)	1020, 1821
BanI	GGYRCC	1 cut(s)	228
BanII	GRGCYC	6 cut(s)	187, 243, 570, 872, 1094, 2083
BarI	GAAGNNNNNNTAC	2 cut(s)	38, 70
BbrPI	CACGTG	1 cut(s)	388
BbsI	GAAGAC	3 cut(s)	53, 1575, 1750
Bbv12I	GWGCWC	7 cut(s)	387, 393, 1109, 1242, 1688, 1941, 2083
BbvI	GCAGC	7 cut(s)	24, 41, 483, 705, 895, 1210, 1658
BciT130I	CCWGG	6 cut(s)	751, 782, 1275, 1494, 1565, 1672
BciVI	GTATCC	2 cut(s)	1500, 1526
BclI	TGATCA	2 cut(s)	309, 1461
BcnI	CCSGG	5 cut(s)	363, 541, 717, 1745, 1746
BcoDI	GTCTC	1 cut(s)	1182
BfaI	CTAG	1 cut(s)	771
BfmI	CTRYAG	1 cut(s)	1860
BfuI	GTATCC	2 cut(s)	1500, 1526
BglII	AGATCT	1 cut(s)	459
BlpI	GCTNAGC	1 cut(s)	1202
Bme18I	GGWCC	2 cut(s)	280, 365
BmeT110I	CYCGRG	2 cut(s)	863, 1744
BmgT120I	GGNCC	6 cut(s)	280, 365, 537, 1090, 1091, 1793
BmiI	GGNNCC	9 cut(s)	184, 230, 282, 366, 367, 567, 869, 1092, 1093
BmrI	ACTGGG	1 cut(s)	1868
BmsI	GCATC	7 cut(s)	49, 828, 1140, 1302, 1434, 1756, 2021
BmuI	ACTGGG	1 cut(s)	1868
BpiI	GAAGAC	3 cut(s)	53, 1575, 1750
BplI	GAGNNNNNCTC	2 cut(s)	230, 262
BpmI	CTGGAG	1 cut(s)	2097
Bpu1102I	GCTNAGC	1 cut(s)	1202
BpuMI	CCSGG	5 cut(s)	363, 541, 717, 1745, 1746
BsaAI	YACGTR	2 cut(s)	388, 2068
BsaBI	GATNNNNATC	1 cut(s)	2011
BsaHI	GRCGYC	2 cut(s)	302, 2088
BsaJI	CCNNGG	4 cut(s)	862, 884, 1733, 1744
BsaWI	WCCGGW	2 cut(s)	127, 413
BsaXI	ACNNNNNCTCC	4 cut(s)	47, 77, 128, 158
Bsc4I	CCNNNNNNNGG	7 cut(s)	298, 420, 579, 650, 750, 885, 1839
Bse118I	RCCGGY	3 cut(s)	5, 82, 1933
Bse1I	ACTGG	7 cut(s)	217, 667, 879, 1021, 1502, 1844, 1874
Bse3DI	GCAATG	4 cut(s)	582, 678, 1367, 1617
Bse8I	GATNNNNATC	1 cut(s)	2011
BseAI	TCCGGA	1 cut(s)	413
BseBI	CCWGG	6 cut(s)	751, 782, 1275, 1494, 1565, 1672
BseDI	CCNNGG	4 cut(s)	862, 884, 1733, 1744
BseGI	GGATG	7 cut(s)	435, 777, 1003, 1240, 1283, 1293, 2139
BseJI	GATNNNNATC	1 cut(s)	2011
BseLI	CCNNNNNNNGG	7 cut(s)	298, 420, 579, 650, 750, 885, 1839
BseMI	GCAATG	4 cut(s)	582, 678, 1367, 1617
BseMII	CTCAG	2 cut(s)	281, 530
BseNI	ACTGG	7 cut(s)	217, 667, 879, 1021, 1502, 1844, 1874
BseRI	GAGGAG	2 cut(s)	24, 1163
BseSI	GKGCMC	4 cut(s)	622, 1094, 1242, 1587
BseXI	GCAGC	7 cut(s)	24, 41, 483, 705, 895, 1210, 1658
BseYI	CCCAGC	1 cut(s)	419
BsgI	GTGCAG	1 cut(s)	791
Bsh1236I	CGCG	4 cut(s)	191, 237, 452, 2043
Bsh1285I	CGRYCG	2 cut(s)	105, 156
BshNI	GGYRCC	1 cut(s)	228
BsiEI	CGRYCG	2 cut(s)	105, 156
BsiHKAI	GWGCWC	7 cut(s)	387, 393, 1109, 1242, 1688, 1941, 2083
BsiHKCI	CYCGRG	2 cut(s)	863, 1744
BslFI	GGGAC	4 cut(s)	266, 378, 1676, 1856
BslI	CCNNNNNNNGG	7 cut(s)	298, 420, 579, 650, 750, 885, 1839
BsmAI	GTCTC	1 cut(s)	1182
BsmFI	GGGAC	4 cut(s)	266, 378, 1676, 1856
BsmI	GAATGC	1 cut(s)	1559
BsoBI	CYCGRG	2 cut(s)	863, 1744
Bsp120I	GGGCCC	1 cut(s)	1090
Bsp13I	TCCGGA	1 cut(s)	413
Bsp143I	GATC	9 cut(s)	102, 139, 258, 309, 316, 459, 753, 1000, 1461
Bsp1720I	GCTNAGC	1 cut(s)	1202
Bsp19I	CCATGG	1 cut(s)	1733
BspCNI	CTCAG	2 cut(s)	280, 529
BspEI	TCCGGA	1 cut(s)	413
BspFNI	CGCG	4 cut(s)	191, 237, 452, 2043
BspHI	TCATGA	1 cut(s)	1251
BspLI	GGNNCC	9 cut(s)	184, 230, 282, 366, 367, 567, 869, 1092, 1093
BspPI	GGATC	3 cut(s)	134, 324, 761
BspQI	GCTCTTC	1 cut(s)	617
BspT107I	GGYRCC	1 cut(s)	228
BsrBI	CCGCTC	2 cut(s)	266, 286
BsrDI	GCAATG	4 cut(s)	582, 678, 1367, 1617
BsrFI	RCCGGY	3 cut(s)	5, 82, 1933
BsrI	ACTGG	7 cut(s)	217, 667, 879, 1021, 1502, 1844, 1874
BssAI	RCCGGY	3 cut(s)	5, 82, 1933
BssECI	CCNNGG	4 cut(s)	862, 884, 1733, 1744
BssMI	GATC	9 cut(s)	102, 139, 258, 309, 316, 459, 753, 1000, 1461
BssNI	GRCGYC	2 cut(s)	302, 2088
BssT1I	CCWWGG	1 cut(s)	1733
Bst2UI	CCWGG	6 cut(s)	751, 782, 1275, 1494, 1565, 1672
Bst4CI	ACNGT	7 cut(s)	124, 157, 812, 1639, 1690, 1730, 1954
Bst6I	CTCTTC	3 cut(s)	617, 630, 1413
BstACI	GRCGYC	2 cut(s)	302, 2088
BstBAI	YACGTR	2 cut(s)	388, 2068
BstC8I	GCNNGC	9 cut(s)	84, 193, 239, 570, 1144, 1380, 1449, 1551, 1884
BstDEI	CTNAG	4 cut(s)	267, 516, 1202, 1849
BstDSI	CCRYGG	2 cut(s)	884, 1733
BstEII	GGTNACC	1 cut(s)	130
BstF5I	GGATG	7 cut(s)	435, 777, 1003, 1240, 1283, 1293, 2139
BstFNI	CGCG	4 cut(s)	191, 237, 452, 2043
BstHHI	GCGC	3 cut(s)	452, 496, 2045
BstKTI	GATC	9 cut(s)	105, 142, 261, 312, 319, 462, 756, 1003, 1464
BstMAI	GTCTC	1 cut(s)	1182
BstMBI	GATC	9 cut(s)	102, 139, 258, 309, 316, 459, 753, 1000, 1461
BstMCI	CGRYCG	2 cut(s)	105, 156
BstMWI	GCNNNNNNNGC	9 cut(s)	15, 247, 272, 550, 905, 1246, 1892, 2087, 2096
BstNI	CCWGG	6 cut(s)	751, 782, 1275, 1494, 1565, 1672
BstNSI	RCATGY	2 cut(s)	1963, 2144
BstPI	GGTNACC	1 cut(s)	130
BstSFI	CTRYAG	1 cut(s)	1860
BstSLI	GKGCMC	4 cut(s)	622, 1094, 1242, 1587
BstUI	CGCG	4 cut(s)	191, 237, 452, 2043
BstV1I	GCAGC	7 cut(s)	24, 41, 483, 705, 895, 1210, 1658
BstV2I	GAAGAC	3 cut(s)	53, 1575, 1750
BstX2I	RGATCY	2 cut(s)	459, 753
BstYI	RGATCY	2 cut(s)	459, 753
BsuI	GTATCC	2 cut(s)	1500, 1526
BtgI	CCRYGG	2 cut(s)	884, 1733
BtgZI	GCGATG	1 cut(s)	1540
BtsCI	GGATG	7 cut(s)	435, 777, 1003, 1240, 1283, 1293, 2139
BtsI	GCAGTG	1 cut(s)	620
BtsIMutI	CAGTG	1 cut(s)	620
Cac8I	GCNNGC	9 cut(s)	84, 193, 239, 570, 1144, 1380, 1449, 1551, 1884
CciI	TCATGA	1 cut(s)	1251
CfoI	GCGC	3 cut(s)	452, 496, 2045
Cfr10I	RCCGGY	3 cut(s)	5, 82, 1933
Cfr13I	GGNCC	6 cut(s)	280, 365, 537, 1090, 1091, 1793
Cfr9I	CCCGGG	1 cut(s)	1744
CseI	GACGC	3 cut(s)	184, 291, 2096
Csp6I	GTAC	6 cut(s)	229, 556, 1471, 1635, 2111, 2119
CviQI	GTAC	6 cut(s)	229, 556, 1471, 1635, 2111, 2119
DdeI	CTNAG	4 cut(s)	267, 516, 1202, 1849
DpnI	GATC	9 cut(s)	104, 141, 260, 311, 318, 461, 755, 1002, 1463
DpnII	GATC	9 cut(s)	102, 139, 258, 309, 316, 459, 753, 1000, 1461
DrdI	GACNNNNNNGTC	1 cut(s)	810
DseDI	GACNNNNNNGTC	1 cut(s)	810
EaeI	YGGCCR	4 cut(s)	16, 289, 1018, 1819
Eam1104I	CTCTTC	3 cut(s)	617, 630, 1413
EarI	CTCTTC	3 cut(s)	617, 630, 1413
EciI	GGCGGA	4 cut(s)	55, 66, 101, 1049
Ecl136II	GAGCTC	1 cut(s)	2081
Eco130I	CCWWGG	1 cut(s)	1733
Eco24I	GRGCYC	6 cut(s)	187, 243, 570, 872, 1094, 2083
Eco32I	GATATC	1 cut(s)	1499
Eco47I	GGWCC	2 cut(s)	280, 365
Eco53kI	GAGCTC	1 cut(s)	2081
Eco57I	CTGAAG	1 cut(s)	598
Eco72I	CACGTG	1 cut(s)	388
Eco88I	CYCGRG	2 cut(s)	863, 1744
Eco91I	GGTNACC	1 cut(s)	130
EcoICRI	GAGCTC	1 cut(s)	2081
EcoO109I	RGGNCCY	3 cut(s)	365, 1090, 1091
EcoO65I	GGTNACC	1 cut(s)	130
EcoRI	GAATTC	1 cut(s)	347
EcoRII	CCWGG	6 cut(s)	749, 780, 1273, 1492, 1563, 1670
EcoRV	GATATC	1 cut(s)	1499
EcoT14I	CCWWGG	1 cut(s)	1733
EcoT22I	ATGCAT	1 cut(s)	1078
EcoT38I	GRGCYC	6 cut(s)	187, 243, 570, 872, 1094, 2083
ErhI	CCWWGG	1 cut(s)	1733
FaqI	GGGAC	4 cut(s)	266, 378, 1676, 1856
FauI	CCCGC	2 cut(s)	291, 577
FauNDI	CATATG	1 cut(s)	1700
FbaI	TGATCA	2 cut(s)	309, 1461
FblI	GTMKAC	1 cut(s)	429
FokI	GGATG	7 cut(s)	422, 764, 1010, 1247, 1280, 1290, 2146
FriOI	GRGCYC	6 cut(s)	187, 243, 570, 872, 1094, 2083
FspBI	CTAG	1 cut(s)	771
GlaI	GCGC	3 cut(s)	451, 495, 2044
GsaI	CCCAGC	1 cut(s)	423
GsuI	CTGGAG	1 cut(s)	2097
HgaI	GACGC	3 cut(s)	184, 291, 2096
HhaI	GCGC	3 cut(s)	452, 496, 2045
Hin1I	GRCGYC	2 cut(s)	302, 2088
Hin6I	GCGC	3 cut(s)	450, 494, 2043
HinP1I	GCGC	3 cut(s)	450, 494, 2043
HincII	GTYRAC	2 cut(s)	1957, 1981
HindII	GTYRAC	2 cut(s)	1957, 1981
HindIII	AAGCTT	1 cut(s)	1577
HinfI	GANTC	6 cut(s)	49, 1049, 1419, 1996, 2007, 2053
HpaI	GTTAAC	1 cut(s)	1957
HphI	GGTGA	5 cut(s)	112, 124, 244, 388, 1918
Hpy166II	GTNNAC	5 cut(s)	430, 1008, 1240, 1957, 1981
Hpy188I	TCNGA	7 cut(s)	45, 102, 182, 270, 997, 1443, 1726
Hpy8I	GTNNAC	5 cut(s)	430, 1008, 1240, 1957, 1981
Hpy99I	CGWCG	2 cut(s)	140, 307
HpyAV	CCTTC	7 cut(s)	217, 373, 379, 694, 722, 1120, 1906
HpyCH4III	ACNGT	7 cut(s)	124, 157, 812, 1639, 1690, 1730, 1954
HpyCH4IV	ACGT	3 cut(s)	387, 426, 2067
HpyCH4V	TGCA	7 cut(s)	625, 693, 808, 1076, 1240, 1293, 1360
HpyF10VI	GCNNNNNNNGC	9 cut(s)	15, 247, 272, 550, 905, 1246, 1892, 2087, 2096
HpyF3I	CTNAG	4 cut(s)	267, 516, 1202, 1849
HpySE526I	ACGT	3 cut(s)	387, 426, 2067
Hsp92I	GRCGYC	2 cut(s)	302, 2088
HspAI	GCGC	3 cut(s)	450, 494, 2043
KflI	GGGWCCC	1 cut(s)	365
Kpn2I	TCCGGA	1 cut(s)	413
KpnI	GGTACC	1 cut(s)	232
KroI	GCCGGC	1 cut(s)	82
KroNI	GCCGGC	1 cut(s)	84
Ksp22I	TGATCA	2 cut(s)	309, 1461
KspAI	GTTAAC	1 cut(s)	1957
Kzo9I	GATC	9 cut(s)	102, 139, 258, 309, 316, 459, 753, 1000, 1461
LguI	GCTCTTC	1 cut(s)	617
LmnI	GCTCC	8 cut(s)	37, 182, 382, 416, 565, 867, 1870, 2078
Lsp1109I	GCAGC	7 cut(s)	24, 41, 483, 705, 895, 1210, 1658
LweI	GCATC	7 cut(s)	49, 828, 1140, 1302, 1434, 1756, 2021
MaeI	CTAG	1 cut(s)	771
MaeII	ACGT	3 cut(s)	387, 426, 2067
MaeIII	GTNAC	4 cut(s)	130, 157, 719, 946
MalI	GATC	9 cut(s)	104, 141, 260, 311, 318, 461, 755, 1002, 1463
MbiI	CCGCTC	2 cut(s)	266, 286
MboI	GATC	9 cut(s)	102, 139, 258, 309, 316, 459, 753, 1000, 1461
MflI	RGATCY	2 cut(s)	459, 753
MlsI	TGGCCA	2 cut(s)	1020, 1821
MluCI	AATT	4 cut(s)	347, 1135, 1342, 1596
MluNI	TGGCCA	2 cut(s)	1020, 1821
MlyI	GAGTC	3 cut(s)	43, 1428, 2062
MmeI	TCCRAC	1 cut(s)	1077
Mox20I	TGGCCA	2 cut(s)	1020, 1821
Mph1103I	ATGCAT	1 cut(s)	1078
MreI	CGCCGGCG	1 cut(s)	82
MroI	TCCGGA	1 cut(s)	413
MroNI	GCCGGC	1 cut(s)	82
MscI	TGGCCA	2 cut(s)	1020, 1821
MseI	TTAA	6 cut(s)	456, 656, 1071, 1179, 1917, 1956
MslI	CAYNNNNRTG	2 cut(s)	1541, 1934
Msp20I	TGGCCA	2 cut(s)	1020, 1821
MspA1I	CMGCKG	2 cut(s)	15, 1992
Mva1269I	GAATGC	1 cut(s)	1559
MvaI	CCWGG	6 cut(s)	751, 782, 1275, 1494, 1565, 1672
MvnI	CGCG	4 cut(s)	191, 237, 452, 2043
MwoI	GCNNNNNNNGC	9 cut(s)	15, 247, 272, 550, 905, 1246, 1892, 2087, 2096
NaeI	GCCGGC	1 cut(s)	84
NciI	CCSGG	5 cut(s)	363, 541, 717, 1745, 1746
NcoI	CCATGG	1 cut(s)	1733
NdeI	CATATG	1 cut(s)	1700
NdeII	GATC	9 cut(s)	102, 139, 258, 309, 316, 459, 753, 1000, 1461
NgoMIV	GCCGGC	1 cut(s)	82
NlaIV	GGNNCC	9 cut(s)	184, 230, 282, 366, 367, 567, 869, 1092, 1093
NmeAIII	GCCGAG	1 cut(s)	267
NmuCI	GTSAC	3 cut(s)	130, 157, 946
NsiI	ATGCAT	1 cut(s)	1078
NspI	RCATGY	2 cut(s)	1963, 2144
PagI	TCATGA	1 cut(s)	1251
PciI	ACATGT	1 cut(s)	2140
PciSI	GCTCTTC	1 cut(s)	617
PcsI	WCGNNNNNNNCGW	2 cut(s)	120, 254
PctI	GAATGC	1 cut(s)	1559
PdiI	GCCGGC	1 cut(s)	84
PfeI	GAWTC	3 cut(s)	1049, 1996, 2007
PflFI	GACNNNGTC	1 cut(s)	1754
PflMI	CCANNNNNTGG	4 cut(s)	298, 650, 885, 1839
PfoI	TCCNGGA	5 cut(s)	361, 749, 1273, 1492, 1563
Ple19I	CGATCG	1 cut(s)	105
PleI	GAGTC	3 cut(s)	43, 1427, 2061
PmaCI	CACGTG	1 cut(s)	388
PmlI	CACGTG	1 cut(s)	388
PpsI	GAGTC	3 cut(s)	43, 1427, 2061
Ppu21I	YACGTR	2 cut(s)	388, 2068
PpuMI	RGGWCCY	1 cut(s)	365
PscI	ACATGT	1 cut(s)	2140
PshBI	ATTAAT	1 cut(s)	1071
Psp124BI	GAGCTC	1 cut(s)	2083
Psp5II	RGGWCCY	1 cut(s)	365
Psp6I	CCWGG	6 cut(s)	749, 780, 1273, 1492, 1563, 1670
PspCI	CACGTG	1 cut(s)	388
PspEI	GGTNACC	1 cut(s)	130
PspFI	CCCAGC	1 cut(s)	419
PspGI	CCWGG	6 cut(s)	749, 780, 1273, 1492, 1563, 1670
PspN4I	GGNNCC	9 cut(s)	184, 230, 282, 366, 367, 567, 869, 1092, 1093
PspOMI	GGGCCC	1 cut(s)	1090
PspPI	GGNCC	6 cut(s)	280, 365, 537, 1090, 1091, 1793
PspPPI	RGGWCCY	1 cut(s)	365
PsuI	RGATCY	2 cut(s)	459, 753
PsyI	GACNNNGTC	1 cut(s)	1754
PvuI	CGATCG	1 cut(s)	105
PvuII	CAGCTG	1 cut(s)	1992
RsaI	GTAC	6 cut(s)	230, 557, 1472, 1636, 2112, 2120
RsaNI	GTAC	6 cut(s)	229, 556, 1471, 1635, 2111, 2119
RseI	CAYNNNNRTG	2 cut(s)	1541, 1934
SacI	GAGCTC	1 cut(s)	2083
SapI	GCTCTTC	1 cut(s)	617
SaqAI	TTAA	6 cut(s)	456, 656, 1071, 1179, 1917, 1956
Sau3AI	GATC	9 cut(s)	102, 139, 258, 309, 316, 459, 753, 1000, 1461
Sau96I	GGNCC	6 cut(s)	280, 365, 537, 1090, 1091, 1793
SchI	GAGTC	3 cut(s)	43, 1428, 2062
SfaNI	GCATC	7 cut(s)	49, 828, 1140, 1302, 1434, 1756, 2021
SfcI	CTRYAG	1 cut(s)	1860
SgrAI	CRCCGGYG	1 cut(s)	82
SinI	GGWCC	2 cut(s)	280, 365
SmaI	CCCGGG	1 cut(s)	1746
SmiMI	CAYNNNNRTG	2 cut(s)	1541, 1934
SrfI	GCCCGGGC	1 cut(s)	1746
Sse9I	AATT	4 cut(s)	347, 1135, 1342, 1596
SspI	AATATT	2 cut(s)	904, 1806
SspMI	CTAG	1 cut(s)	771
SstI	GAGCTC	1 cut(s)	2083
StyI	CCWWGG	1 cut(s)	1733
TaaI	ACNGT	7 cut(s)	124, 157, 812, 1639, 1690, 1730, 1954
TaiI	ACGT	3 cut(s)	390, 429, 2070
TaqI	TCGA	4 cut(s)	105, 257, 319, 837
TasI	AATT	4 cut(s)	347, 1135, 1342, 1596
TatI	WGTACW	2 cut(s)	1470, 2118
TauI	GCSGC	5 cut(s)	12, 18, 82, 237, 575
TfiI	GAWTC	3 cut(s)	1049, 1996, 2007
Tru1I	TTAA	6 cut(s)	456, 656, 1071, 1179, 1917, 1956
Tru9I	TTAA	6 cut(s)	456, 656, 1071, 1179, 1917, 1956
TscAI	CASTG	1 cut(s)	627
TseFI	GTSAC	3 cut(s)	130, 157, 946
TseI	GCWGC	7 cut(s)	12, 29, 496, 693, 908, 1198, 1646
Tsp45I	GTSAC	3 cut(s)	130, 157, 946
TspDTI	ATGAA	5 cut(s)	1154, 1276, 1559, 1606, 1607
TspGWI	ACGGA	2 cut(s)	329, 873
TspMI	CCCGGG	1 cut(s)	1744
TspRI	CASTG	1 cut(s)	627
Tth111I	GACNNNGTC	1 cut(s)	1754
Van91I	CCANNNNNTGG	4 cut(s)	298, 650, 885, 1839
VneI	GTGCAC	1 cut(s)	1238
VpaK11BI	GGWCC	2 cut(s)	280, 365
VspI	ATTAAT	1 cut(s)	1071
XapI	RAATTY	2 cut(s)	347, 1596
XceI	RCATGY	2 cut(s)	1963, 2144
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1561, 1908
XmaI	CCCGGG	1 cut(s)	1744
XmiI	GTMKAC	1 cut(s)	429
XspI	CTAG	1 cut(s)	771
Zsp2I	ATGCAT	1 cut(s)	1078

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.