Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr14

Orthogroup ID

OG0001550

Physical Location & Seq

Genomic Coordinates Forward (+)

13788748 .. 13793658

Gene Structure 4911 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom14g11000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2355 bp

ATGTTGCAAAAAATAAGTTGTTCCGATTATAGCATTTATTATCTAGTGAATTTTTTACATAGTTCGGGAAAAAAACACAGAATGACAGAAAGTAGCAGAGAATCCATGGAAGAAGCATCCTCTCATGAAATCACCTCCCTTCTCATTCCTAAGGAAGAGAAAAAACATGAAGGCTTCCATGGCCAATCATCATCTTCCGGATCAACAGAAGAAGAAAACTCACCAGTGGAACAAGTAGCGCTAACTGTGCCGACAACAGACGATCCCTCCCTCCCCGTCCTGACGTTCCGAATGTGGGTCCTAGGCACTCTCTCCTGCGTCCTCCTCTCCTTCCTCAACCAATTCTTCTGGTACAGAACCGAGCCCCTCTCCATTACCGCAATCTCCGCCCAGATTGCGGTGGTGCCTCTGGGGCAGCTTATGGCTTCCAAAATCACCAACCGTGTCTTCTTCAAAGGGTCCCGCTGGGAATTTACGCTAAACCCTGGCCCTTTCAACGTCAAGGAACATGTTCTAATTACCATCTTCGCCAACTCCGGCGCTGGCACCGTCTACGCGATCCATATTGTTACCGTGGTTAAAGTTTTTTACAAGAAGCACATCACCTTCTTCGTGTCCTTGCTTGTTATCCTAACAACTCAGGTATTAGGGTTTGGTTGGGCTGGGATTTTTAGAAGATACTTGGTTGAACCAGCTGCTATGTGGTGGCCAGCAAACCTGGTTCAAGTTTCACTGTTCAGGGCCCTCCATGAGAACGAAGCAAGGCCCAAGGGTGGGTTGACACGTACCCAGTTCTTCCTAATTTCCTTCATGTGCAGCTTTGCCTACTATGTTTTCCCAGGCTACCTCTTTCAGATGCTAACTTCCCTTTCATGGATATGTTGGATTTTCCCTAACAATGTCTTGGCCCAACAGCTTGGCTCAGGTCTTTATGGGCTTGGAATTGGCGCTGTTGGGATTGACTGGTCAACCATCTCCTCCTACCTTGGAAGCCCACTTGCAAGCCCATGGTTTGCCACAGCCAATGTGGCAGCTGGTTTCTTCTTTGTCATGTACATATTGACTCCCATTTGCTACTGGTTTAATATCTACAAAGCCAAAACCTTCCCCATTTTCTCAGACACATTGTTCACATCGGATGGTCAAGAATACAACATAACATCCATCATTGACTCAAATTTTCACCTTGATTTGGAAGCATACAATCGGGAAGGTCCGCTTTATCTCAGCACGTTTTTTGCCATAACATACGGTGTTGGCTTTGCTGCGCTTACCGCCACAGTTGTACATGTTGCTTTATTTCATGGAAGAGAAATATGGGAGCAAAGCAAAGCAAGTTTCAAGGAGAAGAAAATGGACATACACACAAGGTTGATGCAGAGGTACAACCAAGTGCCTGAGTGGTGGTTTGTGATCATACTTTTGGTCAACATTGCAGTCACTATATTTTCCTGTCAATATTATATTGAGCAACTCCAGTTGCCTTGGTGGGGTGTTTTACTAGCTTGTGCTATTGCCATTGTCTTCACCCTCCCCATTGGTATCATCACTGCCATCACAAATCAGACACCGGGCTTAAACATCATCACTGAGTATATAATTGGGTACATCTACCCAGGATACCCAGTAGCCAATATGTGCTTCAAGGTGTATGGCTACATAAGTATGACACAAGCCATCACATTTTTGCAAGACTTCAAGCTTGGTCACTACATGAAAATCCCTCCTAGAACTATGTTTATGGCCCAGGTTGTGGGAACCCTAATAGCTGCCATTGTATACTTGAGCACAGCTTGGTGGCTAATGGAAACAATCCCGGACATATGTGAGGACACGTCATCAATATGGACTTGCCCTAGTGACACAGTATTTTATGATGCCTCGGTCATATGGGGCCTGATTGGTCCTAGAAGAATATTTGGTGACTTAGGCATATATGAGGCAATCAACTGGTTCTTCCTAGTTGGGGCAATTGCCCCCATTTTTGTATGGCTGGCTGCCAAGGCCTTCCCACAACAAGAGTGGATTAGGCTCATCAACATGCCGGTCCTAATCGGTGCGACAGGATCGATGCCGCCAGCTACAGCGGTGAACTACACTTCTTGGATTATTTTAGGGTTTCTATCTGGTTTTGTGGTGTATAGATATAGACCAGACTGGTGGAGGCGCCATAATTATGTACTCTCTGGGGCACTTGATGCTGGACTTGCCTTCATGGGGGTACTTTTGTATTTTAGCTTGGGGTTAGAGGACATTAGTCTTAGCTGGTGGGGGAATGACCTTGATGGTTGTCCGTTGGCTACTTGTCCTACGGCCAAGGGAGTGGTTGTTGAGGGTTGCCCTACTTACACATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006857 GO:0008150 GO:0015833 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0031226 GO:0035672 GO:0035673 GO:0042886 GO:0042887 GO:0044425 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OPT

Protein Analysis

785

Amino Acids

88.44

Weight (kDa)

6.22

Isoelectric Point (pI)

35.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
OPT	PF03169	94 - 746	3.7e-177	OPT oligopeptide transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001550)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G10770 AT4G10770
fragaria_vesca	FvH4_1g11690 FvH4_1g11690 FvH4_1g11690 FvH4_1g11690 FvH4_1g11690 FvH4_5g11060 FvH4_5g11060 FvH4_5g11060 FvH4_5g11060 FvH4_5g11060
malus_domestica	MD02G1129900.v1.1 MD06G1116800.v1.1 MD14G1124200.v1.1
prunus_persica	Prupe.5G128100_v2.0.a1 Prupe.5G128100_v2.0.a1 Prupe.5G128100_v2.0.a1 Prupe.5G128100_v2.0.a1 Prupe.7G169800_v2.0.a1 Prupe.7G169800_v2.0.a1 Prupe.7G169800_v2.0.a1
pyrus_communis	pycom02g10180 pycom06g10890 pycom14g11000
rosa_chinensis	RchiOBHm_Chr2g0099261 RchiOBHm_Chr7g0186741
rosa_laevigata	RLG00000004820 RLG00000016866
rosa_multiflora	Rmu_co8201022.1_g000001 Rmu_co8437885.1_g000001 Rmu_co8448977.1_g000001 Rmu_sc0009734.1_g000005
rosa_roxburghii	Rroxscaffold_2G00143270 Rroxscaffold_3G00267870
rosa_rugosa	Rorug02G0078300 Rorug02G0078300 Rorug02G0078300 Rorug06G0476200 Rorug06G0476300
rosa_samantha	Rh2AG127500 Rh2BG130500 Rh2CG131700 Rh2DG132100 Rh7AG064300 Rh7BG080800 Rh7CG083200 Rh7DG084100
rosa_wichuraiana	Rw2G009840 Rw7G007210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	403, 545, 2166
AccB7I	CCANNNNNTGG	1 cut(s)	1753
AccI	GTMKAC	2 cut(s)	552, 1779
AccII	CGCG	1 cut(s)	557
AccIII	TCCGGA	1 cut(s)	197
AciI	CCGC	8 cut(s)	378, 387, 398, 463, 1217, 1275, 2075, 2087
AclWI	GGATC	4 cut(s)	208, 257, 553, 2074
AcoI	YGGCCR	3 cut(s)	181, 707, 2313
AcsI	RAATTY	3 cut(s)	49, 470, 1177
AcyI	GRCGYC	1 cut(s)	2167
AfaI	GTAC	8 cut(s)	353, 787, 1055, 1287, 1385, 1607, 2181, 2223
AfeI	AGCGCT	1 cut(s)	240
AflIII	ACRYGT	4 cut(s)	508, 782, 1288, 1833
AgsI	TTSAA	7 cut(s)	454, 496, 689, 725, 1342, 1645, 1699
AjiI	CACGTC	1 cut(s)	1836
AjnI	CCWGG	5 cut(s)	484, 717, 838, 1615, 1746
AjuI	GAANNNNNNNTTGG	4 cut(s)	431, 463, 1625, 1657
Alw21I	GWGCWC	1 cut(s)	1790
AlwI	GGATC	4 cut(s)	208, 257, 553, 2074
Aor13HI	TCCGGA	1 cut(s)	197
Aor51HI	AGCGCT	1 cut(s)	240
ApaI	GGGCCC	1 cut(s)	745
ApeKI	GCWGC	7 cut(s)	415, 695, 816, 1031, 1265, 1769, 1997
ApoI	RAATTY	3 cut(s)	49, 470, 1177
Asp700I	GAANNNNTTC	1 cut(s)	510
AspA2I	CCTAGG	1 cut(s)	301
AspLEI	GCGC	5 cut(s)	241, 542, 950, 1270, 2169
AsuC2I	CCSGG	2 cut(s)	1572, 1817
AsuHPI	GGTGA	8 cut(s)	124, 213, 427, 595, 1175, 1519, 1934, 2101
AvaII	GGWCC	5 cut(s)	298, 459, 1214, 1904, 2047
AvrII	CCTAGG	1 cut(s)	301
AxyI	CCTNAGG	1 cut(s)	150
BaeGI	GKGCMC	2 cut(s)	745, 2194
BaeI	ACNNNNGTAYC	2 cut(s)	2213, 2246
BalI	TGGCCA	2 cut(s)	183, 709
BanI	GGYRCC	3 cut(s)	403, 545, 2166
BanII	GRGCYC	2 cut(s)	366, 745
BbsI	GAAGAC	2 cut(s)	439, 1516
Bbv12I	GWGCWC	1 cut(s)	1790
BbvI	GCAGC	7 cut(s)	427, 682, 828, 1043, 1252, 1756, 1984
BccI	CCATC	7 cut(s)	530, 980, 1133, 1172, 1562, 1685, 2279
BceAI	ACGGC	1 cut(s)	2328
BciT130I	CCWGG	5 cut(s)	486, 719, 840, 1617, 1748
BciVI	GTATCC	1 cut(s)	1613
BclI	TGATCA	1 cut(s)	1413
BcnI	CCSGG	2 cut(s)	1572, 1817
BfaI	CTAG	7 cut(s)	44, 302, 1502, 1728, 1857, 1908, 1961
BfmI	CTRYAG	1 cut(s)	2082
BfoI	RGCGCY	4 cut(s)	242, 543, 951, 2170
BfuI	GTATCC	1 cut(s)	1613
BglI	GCCNNNNNGGC	2 cut(s)	412, 1028
BisI	GCNGC	8 cut(s)	416, 696, 817, 1032, 1266, 1770, 1998, 2075
BlnI	CCTAGG	1 cut(s)	301
BlsI	GCNGC	8 cut(s)	417, 697, 818, 1033, 1267, 1771, 1999, 2076
Bme1390I	CCNGG	7 cut(s)	486, 719, 840, 1572, 1617, 1748, 1817
Bme18I	GGWCC	5 cut(s)	298, 459, 1214, 1904, 2047
BmgBI	CACGTC	1 cut(s)	1836
BmiI	GGNNCC	9 cut(s)	299, 405, 460, 461, 547, 743, 1759, 1895, 2168
BmrFI	CCNGG	7 cut(s)	486, 719, 840, 1572, 1617, 1748, 1817
BmrI	ACTGGG	2 cut(s)	784, 1619
BmsI	GCATC	6 cut(s)	125, 846, 1365, 1867, 2061, 2188
BmuI	ACTGGG	2 cut(s)	784, 1619
BoxI	GACNNNNGTC	1 cut(s)	2256
BpiI	GAAGAC	2 cut(s)	439, 1516
BplI	GAGNNNNNCTC	2 cut(s)	353, 385
BpmI	CTGGAG	1 cut(s)	1460
Bpu10I	CCTNAGC	1 cut(s)	922
BpuEI	CTTGAG	1 cut(s)	1804
BpuMI	CCSGG	2 cut(s)	1572, 1817
Bsa29I	ATCGAT	1 cut(s)	2069
BsaAI	YACGTR	1 cut(s)	785
BsaHI	GRCGYC	1 cut(s)	2167
BsaWI	WCCGGW	1 cut(s)	197
BsaXI	ACNNNNNCTCC	4 cut(s)	251, 281, 2313, 2343
Bse118I	RCCGGY	1 cut(s)	2044
Bse1I	ACTGG	8 cut(s)	224, 790, 968, 1082, 1477, 1625, 1955, 2162
Bse21I	CCTNAGG	1 cut(s)	150
Bse3DI	GCAATG	1 cut(s)	1431
BseAI	TCCGGA	1 cut(s)	197
BseBI	CCWGG	5 cut(s)	486, 719, 840, 1617, 1748
BseCI	ATCGAT	1 cut(s)	2069
BseGI	GGATG	3 cut(s)	116, 1144, 1160
BseMI	GCAATG	1 cut(s)	1431
BseMII	CTCAG	6 cut(s)	653, 936, 1131, 1240, 1389, 1581
BseNI	ACTGG	8 cut(s)	224, 790, 968, 1082, 1477, 1625, 1955, 2162
BseRI	GAGGAG	2 cut(s)	314, 967
BseSI	GKGCMC	2 cut(s)	745, 2194
BseXI	GCAGC	7 cut(s)	427, 682, 828, 1043, 1252, 1756, 1984
BseYI	CCCAGC	2 cut(s)	465, 662
BsgI	GTGCAG	1 cut(s)	835
Bsh1236I	CGCG	1 cut(s)	557
BshNI	GGYRCC	3 cut(s)	403, 545, 2166
BshVI	ATCGAT	1 cut(s)	2069
BsiHKAI	GWGCWC	1 cut(s)	1790
BsiSI	CCGG	5 cut(s)	198, 537, 1571, 1817, 2045
BslFI	GGGAC	1 cut(s)	445
BsmFI	GGGAC	1 cut(s)	445
Bsp120I	GGGCCC	1 cut(s)	741
Bsp1286I	GDGCHC	4 cut(s)	366, 745, 1790, 2194
Bsp13I	TCCGGA	1 cut(s)	197
Bsp1407I	TGTACA	2 cut(s)	1053, 1285
Bsp143I	GATC	5 cut(s)	200, 262, 558, 1413, 2066
Bsp19I	CCATGG	3 cut(s)	105, 178, 1007
BspACI	CCGC	8 cut(s)	378, 387, 398, 463, 1217, 1275, 2075, 2087
BspCNI	CTCAG	6 cut(s)	652, 935, 1130, 1239, 1390, 1582
BspDI	ATCGAT	1 cut(s)	2069
BspEI	TCCGGA	1 cut(s)	197
BspFNI	CGCG	1 cut(s)	557
BspHI	TCATGA	1 cut(s)	124
BspLI	GGNNCC	9 cut(s)	299, 405, 460, 461, 547, 743, 1759, 1895, 2168
BspPI	GGATC	4 cut(s)	208, 257, 553, 2074
BspT107I	GGYRCC	3 cut(s)	403, 545, 2166
BsrDI	GCAATG	1 cut(s)	1431
BsrFI	RCCGGY	1 cut(s)	2044
BsrGI	TGTACA	2 cut(s)	1053, 1285
BsrI	ACTGG	8 cut(s)	224, 790, 968, 1082, 1477, 1625, 1955, 2162
BssAI	RCCGGY	1 cut(s)	2044
BssMI	GATC	5 cut(s)	200, 262, 558, 1413, 2066
BssNAI	GTATAC	1 cut(s)	1780
BssNI	GRCGYC	1 cut(s)	2167
BssT1I	CCWWGG	9 cut(s)	105, 178, 301, 768, 985, 1007, 1484, 2001, 2316
Bst1107I	GTATAC	1 cut(s)	1780
Bst2UI	CCWGG	5 cut(s)	486, 719, 840, 1617, 1748
Bst4CI	ACNGT	8 cut(s)	247, 443, 550, 574, 735, 1253, 1282, 1867
Bst6I	CTCTTC	2 cut(s)	150, 1303
BstACI	GRCGYC	1 cut(s)	2167
BstAPI	GCANNNNNTGC	1 cut(s)	2198
BstAUI	TGTACA	2 cut(s)	1053, 1285
BstBAI	YACGTR	1 cut(s)	785
BstC8I	GCNNGC	5 cut(s)	544, 711, 1003, 1995, 2079
BstDEI	CTNAG	9 cut(s)	150, 639, 922, 1117, 1226, 1398, 1590, 1927, 2261
BstDSI	CCRYGG	4 cut(s)	105, 178, 573, 1007
BstF5I	GGATG	3 cut(s)	116, 1144, 1160
BstFNI	CGCG	1 cut(s)	557
BstH2I	RGCGCY	4 cut(s)	242, 543, 951, 2170
BstHHI	GCGC	5 cut(s)	241, 542, 950, 1270, 2169
BstKTI	GATC	5 cut(s)	203, 265, 561, 1416, 2069
BstMBI	GATC	5 cut(s)	200, 262, 558, 1413, 2066
BstNI	CCWGG	5 cut(s)	486, 719, 840, 1617, 1748
BstNSI	RCATGY	3 cut(s)	512, 1292, 2044
BstPAI	GACNNNNGTC	1 cut(s)	2256
BstSCI	CCNGG	7 cut(s)	484, 717, 838, 1570, 1615, 1746, 1815
BstSFI	CTRYAG	1 cut(s)	2082
BstSLI	GKGCMC	2 cut(s)	745, 2194
BstUI	CGCG	1 cut(s)	557
BstV1I	GCAGC	7 cut(s)	427, 682, 828, 1043, 1252, 1756, 1984
BstV2I	GAAGAC	2 cut(s)	439, 1516
BstXI	CCANNNNNNTGG	3 cut(s)	917, 2160, 2323
BstZ17I	GTATAC	1 cut(s)	1780
Bsu15I	ATCGAT	1 cut(s)	2069
Bsu36I	CCTNAGG	1 cut(s)	150
BsuI	GTATCC	1 cut(s)	1613
BsuTUI	ATCGAT	1 cut(s)	2069
BtgI	CCRYGG	4 cut(s)	105, 178, 573, 1007
BtrI	CACGTC	1 cut(s)	1836
BtsCI	GGATG	3 cut(s)	116, 1144, 1160
BtsI	GCAGTG	1 cut(s)	1548
BtsIMutI	CAGTG	4 cut(s)	231, 731, 1548, 1587
Cac8I	GCNNGC	5 cut(s)	544, 711, 1003, 1995, 2079
CciI	TCATGA	1 cut(s)	124
CfoI	GCGC	5 cut(s)	241, 542, 950, 1270, 2169
Cfr10I	RCCGGY	1 cut(s)	2044
ClaI	ATCGAT	1 cut(s)	2069
CseI	GACGC	1 cut(s)	307
CsiI	ACCWGGT	1 cut(s)	717
Csp6I	GTAC	8 cut(s)	352, 786, 1054, 1286, 1384, 1606, 2180, 2222
CspCI	CAANNNNNGTGG	2 cut(s)	2003, 2038
CviQI	GTAC	8 cut(s)	352, 786, 1054, 1286, 1384, 1606, 2180, 2222
DdeI	CTNAG	9 cut(s)	150, 639, 922, 1117, 1226, 1398, 1590, 1927, 2261
DinI	GGCGCC	1 cut(s)	2168
DpnI	GATC	5 cut(s)	202, 264, 560, 1415, 2068
DpnII	GATC	5 cut(s)	200, 262, 558, 1413, 2066
EaeI	YGGCCR	3 cut(s)	181, 707, 2313
Eam1104I	CTCTTC	2 cut(s)	150, 1303
EarI	CTCTTC	2 cut(s)	150, 1303
EciI	GGCGGA	1 cut(s)	376
Eco130I	CCWWGG	9 cut(s)	105, 178, 301, 768, 985, 1007, 1484, 2001, 2316
Eco147I	AGGCCT	1 cut(s)	2006
Eco24I	GRGCYC	2 cut(s)	366, 745
Eco47I	GGWCC	5 cut(s)	298, 459, 1214, 1904, 2047
Eco47III	AGCGCT	1 cut(s)	240
Eco81I	CCTNAGG	1 cut(s)	150
EcoO109I	RGGNCCY	5 cut(s)	298, 459, 741, 742, 1894
EcoRII	CCWGG	5 cut(s)	484, 717, 838, 1615, 1746
EcoT14I	CCWWGG	9 cut(s)	105, 178, 301, 768, 985, 1007, 1484, 2001, 2316
EcoT38I	GRGCYC	2 cut(s)	366, 745
EgeI	GGCGCC	1 cut(s)	2168
EheI	GGCGCC	1 cut(s)	2168
ErhI	CCWWGG	9 cut(s)	105, 178, 301, 768, 985, 1007, 1484, 2001, 2316
FalI	AAGNNNNNCTT	2 cut(s)	1203, 1235
FaqI	GGGAC	1 cut(s)	445
FauI	CCCGC	1 cut(s)	470
FauNDI	CATATG	2 cut(s)	1823, 1889
FbaI	TGATCA	1 cut(s)	1413
FblI	GTMKAC	2 cut(s)	552, 1779
Fnu4HI	GCNGC	8 cut(s)	416, 696, 817, 1032, 1266, 1770, 1998, 2075
FokI	GGATG	3 cut(s)	103, 1147, 1151
FriOI	GRGCYC	2 cut(s)	366, 745
Fsp4HI	GCNGC	8 cut(s)	416, 696, 817, 1032, 1266, 1770, 1998, 2075
FspBI	CTAG	7 cut(s)	44, 302, 1502, 1728, 1857, 1908, 1961
GlaI	GCGC	5 cut(s)	240, 541, 949, 1269, 2168
GluI	GCNGC	8 cut(s)	416, 696, 817, 1032, 1266, 1770, 1998, 2075
GsaI	CCCAGC	2 cut(s)	469, 666
GsuI	CTGGAG	1 cut(s)	1460
HaeII	RGCGCY	4 cut(s)	242, 543, 951, 2170
HapII	CCGG	5 cut(s)	198, 537, 1571, 1817, 2045
HgaI	GACGC	1 cut(s)	307
HhaI	GCGC	5 cut(s)	241, 542, 950, 1270, 2169
Hin1I	GRCGYC	1 cut(s)	2167
Hin6I	GCGC	5 cut(s)	239, 540, 948, 1268, 2167
HinP1I	GCGC	5 cut(s)	239, 540, 948, 1268, 2167
HincII	GTYRAC	3 cut(s)	780, 969, 1429
HindII	GTYRAC	3 cut(s)	780, 969, 1429
HindIII	AAGCTT	1 cut(s)	1700
HinfI	GANTC	3 cut(s)	101, 1063, 1172
HpaII	CCGG	5 cut(s)	198, 537, 1571, 1817, 2045
HphI	GGTGA	8 cut(s)	124, 213, 427, 595, 1175, 1519, 1934, 2101
Hpy166II	GTNNAC	7 cut(s)	553, 780, 969, 1131, 1429, 1780, 2092
Hpy188I	TCNGA	6 cut(s)	25, 290, 855, 1120, 1138, 1566
Hpy188III	TCNNGA	6 cut(s)	66, 125, 198, 280, 1145, 1208
Hpy8I	GTNNAC	7 cut(s)	553, 780, 969, 1131, 1429, 1780, 2092
HpyAV	CCTTC	9 cut(s)	149, 164, 340, 616, 817, 1114, 1205, 2017, 2221
HpyCH4III	ACNGT	8 cut(s)	247, 443, 550, 574, 735, 1253, 1282, 1867
HpyCH4IV	ACGT	5 cut(s)	284, 498, 784, 1232, 1835
HpyCH4V	TGCA	6 cut(s)	7, 816, 1001, 1378, 1436, 1690
HpyF3I	CTNAG	9 cut(s)	150, 639, 922, 1117, 1226, 1398, 1590, 1927, 2261
HpySE526I	ACGT	5 cut(s)	284, 498, 784, 1232, 1835
Hsp92I	GRCGYC	1 cut(s)	2167
HspAI	GCGC	5 cut(s)	239, 540, 948, 1268, 2167
KasI	GGCGCC	1 cut(s)	2166
KflI	GGGWCCC	1 cut(s)	459
Kpn2I	TCCGGA	1 cut(s)	197
Ksp22I	TGATCA	1 cut(s)	1413
Kzo9I	GATC	5 cut(s)	200, 262, 558, 1413, 2066
LmnI	GCTCC	1 cut(s)	1321
Lsp1109I	GCAGC	7 cut(s)	427, 682, 828, 1043, 1252, 1756, 1984
LweI	GCATC	6 cut(s)	125, 846, 1365, 1867, 2061, 2188
MabI	ACCWGGT	1 cut(s)	717
MaeI	CTAG	7 cut(s)	44, 302, 1502, 1728, 1857, 1908, 1961
MaeII	ACGT	5 cut(s)	284, 498, 784, 1232, 1835
MaeIII	GTNAC	5 cut(s)	568, 1438, 1706, 1859, 1922
MalI	GATC	5 cut(s)	202, 264, 560, 1415, 2068
MboI	GATC	5 cut(s)	200, 262, 558, 1413, 2066
MfeI	CAATTG	1 cut(s)	1971
MhlI	GDGCHC	4 cut(s)	366, 745, 1790, 2194
MlsI	TGGCCA	2 cut(s)	183, 709
MluNI	TGGCCA	2 cut(s)	183, 709
Mly113I	GGCGCC	1 cut(s)	2167
MlyI	GAGTC	2 cut(s)	1057, 1166
MmeI	TCCRAC	1 cut(s)	863
Mox20I	TGGCCA	2 cut(s)	183, 709
MroI	TCCGGA	1 cut(s)	197
MroXI	GAANNNNTTC	1 cut(s)	510
MscI	TGGCCA	2 cut(s)	183, 709
MseI	TTAA	3 cut(s)	579, 1083, 1577
MslI	CAYNNNNRTG	5 cut(s)	877, 1664, 1843, 2039, 2175
Msp20I	TGGCCA	2 cut(s)	183, 709
MspA1I	CMGCKG	4 cut(s)	465, 695, 1034, 2087
MspI	CCGG	5 cut(s)	198, 537, 1571, 1817, 2045
MspR9I	CCNGG	7 cut(s)	486, 719, 840, 1572, 1617, 1748, 1817
MunI	CAATTG	1 cut(s)	1971
MvaI	CCWGG	5 cut(s)	486, 719, 840, 1617, 1748
MvnI	CGCG	1 cut(s)	557
NarI	GGCGCC	1 cut(s)	2167
NciI	CCSGG	2 cut(s)	1572, 1817
NcoI	CCATGG	3 cut(s)	105, 178, 1007
NdeI	CATATG	2 cut(s)	1823, 1889
NdeII	GATC	5 cut(s)	200, 262, 558, 1413, 2066
NlaIV	GGNNCC	9 cut(s)	299, 405, 460, 461, 547, 743, 1759, 1895, 2168
NmuCI	GTSAC	4 cut(s)	1438, 1706, 1859, 1922
NspI	RCATGY	3 cut(s)	512, 1292, 2044
PagI	TCATGA	1 cut(s)	124
PceI	AGGCCT	1 cut(s)	2006
PciI	ACATGT	2 cut(s)	508, 1288
PdmI	GAANNNNTTC	1 cut(s)	510
PfeI	GAWTC	1 cut(s)	101
PflMI	CCANNNNNTGG	1 cut(s)	1753
PfoI	TCCNGGA	1 cut(s)	1815
PkrI	GCNGC	8 cut(s)	417, 697, 818, 1033, 1267, 1771, 1999, 2076
PleI	GAGTC	2 cut(s)	1057, 1166
PluTI	GGCGCC	1 cut(s)	2170
PpsI	GAGTC	2 cut(s)	1057, 1166
Ppu21I	YACGTR	1 cut(s)	785
PpuMI	RGGWCCY	2 cut(s)	298, 459
PscI	ACATGT	2 cut(s)	508, 1288
PshAI	GACNNNNGTC	1 cut(s)	2256
Psp5II	RGGWCCY	2 cut(s)	298, 459
Psp6I	CCWGG	5 cut(s)	484, 717, 838, 1615, 1746
PspFI	CCCAGC	2 cut(s)	465, 662
PspGI	CCWGG	5 cut(s)	484, 717, 838, 1615, 1746
PspN4I	GGNNCC	9 cut(s)	299, 405, 460, 461, 547, 743, 1759, 1895, 2168
PspOMI	GGGCCC	1 cut(s)	741
PspPPI	RGGWCCY	2 cut(s)	298, 459
PvuII	CAGCTG	2 cut(s)	695, 1034
RsaI	GTAC	8 cut(s)	353, 787, 1055, 1287, 1385, 1607, 2181, 2223
RsaNI	GTAC	8 cut(s)	352, 786, 1054, 1286, 1384, 1606, 2180, 2222
RseI	CAYNNNNRTG	5 cut(s)	877, 1664, 1843, 2039, 2175
SaqAI	TTAA	3 cut(s)	579, 1083, 1577
SatI	GCNGC	8 cut(s)	416, 696, 817, 1032, 1266, 1770, 1998, 2075
Sau3AI	GATC	5 cut(s)	200, 262, 558, 1413, 2066
SchI	GAGTC	2 cut(s)	1057, 1166
ScrFI	CCNGG	7 cut(s)	486, 719, 840, 1572, 1617, 1748, 1817
SduI	GDGCHC	4 cut(s)	366, 745, 1790, 2194
SexAI	ACCWGGT	1 cut(s)	717
SfaNI	GCATC	6 cut(s)	125, 846, 1365, 1867, 2061, 2188
SfcI	CTRYAG	1 cut(s)	2082
SfoI	GGCGCC	1 cut(s)	2168
SinI	GGWCC	5 cut(s)	298, 459, 1214, 1904, 2047
SmiMI	CAYNNNNRTG	5 cut(s)	877, 1664, 1843, 2039, 2175
SmlI	CTYRAG	1 cut(s)	1783
SmoI	CTYRAG	1 cut(s)	1783
SseBI	AGGCCT	1 cut(s)	2006
SsiI	CCGC	8 cut(s)	378, 387, 398, 463, 1217, 1275, 2075, 2087
SspDI	GGCGCC	1 cut(s)	2166
SspI	AATATT	2 cut(s)	1460, 1917
SspMI	CTAG	7 cut(s)	44, 302, 1502, 1728, 1857, 1908, 1961
StuI	AGGCCT	1 cut(s)	2006
StyD4I	CCNGG	7 cut(s)	484, 717, 838, 1570, 1615, 1746, 1815
StyI	CCWWGG	9 cut(s)	105, 178, 301, 768, 985, 1007, 1484, 2001, 2316
TaaI	ACNGT	8 cut(s)	247, 443, 550, 574, 735, 1253, 1282, 1867
TaiI	ACGT	5 cut(s)	287, 501, 787, 1235, 1838
TaqI	TCGA	1 cut(s)	2069
TaqII	GACCGA	1 cut(s)	1873
TatI	WGTACW	3 cut(s)	1053, 1285, 2179
TauI	GCSGC	1 cut(s)	2077
TfiI	GAWTC	1 cut(s)	101
Tru1I	TTAA	3 cut(s)	579, 1083, 1577
Tru9I	TTAA	3 cut(s)	579, 1083, 1577
TscAI	CASTG	4 cut(s)	231, 738, 1555, 1594
TseFI	GTSAC	4 cut(s)	1438, 1706, 1859, 1922
TseI	GCWGC	7 cut(s)	415, 695, 816, 1031, 1265, 1769, 1997
Tsp45I	GTSAC	4 cut(s)	1438, 1706, 1859, 1922
TspDTI	ATGAA	7 cut(s)	141, 183, 799, 861, 1292, 1730, 2203
TspGWI	ACGGA	1 cut(s)	2283
TspRI	CASTG	4 cut(s)	231, 738, 1555, 1594
Van91I	CCANNNNNTGG	1 cut(s)	1753
VpaK11BI	GGWCC	5 cut(s)	298, 459, 1214, 1904, 2047
XapI	RAATTY	3 cut(s)	49, 470, 1177
XceI	RCATGY	3 cut(s)	512, 1292, 2044
XcmI	CCANNNNNNNNNTGG	3 cut(s)	699, 1024, 2019
XmaJI	CCTAGG	1 cut(s)	301
XmiI	GTMKAC	2 cut(s)	552, 1779
XmnI	GAANNNNTTC	1 cut(s)	510
XspI	CTAG	7 cut(s)	44, 302, 1502, 1728, 1857, 1908, 1961

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.