Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0001550

Physical Location & Seq

Genomic Coordinates Forward (+)

11129110 .. 11132912

Gene Structure 3803 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG132100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1692 bp

ATGAATAGTTTTATTCGAAACAAAGATGATTCGGGTCCTGAATTGTGTGCATGTGTTTGTGTGAACAGAGCATTGCATGAGAAGGAGGAGAGGCCAAGAGGTGGATTGACAAGGAATCAGTTCTTCCTCATTGCTTTCACTTGCAGCTTTGCTTATTATGTTCTTCCGGGCTACTTATTCCCAATGTTATCTTCCCTTTCCTGGGTCTGCTGGATCTTCCCTGCTTCAGTTCTAGCCCATCAGCTAGGGTCAGGACTGCATGGTCTTGGGATCGGTGCTATCGGTCTCGATTGGTCCAGCATTTCCTCTTACCTTGGAAGCCCACTTGCCAGTCCATGGTTTGCTACTGCTAATGTTGCTGCTGGTTTTGCCCTTGTGATGTATGTCATTACTCCTGTGGCTTATTGGCTCAATGTGTATAAAGCAAAAACCTTCCCCATATTCTCAGATGGATTGTTCACGTCTACCGGCCAAAGCTACAACATTTCAGCTATAATAGACCCCAACTTCCGGCTTGACATTGATGCATACGAGCGAGAGGGTCCTCTCCATATCAGTACCTTTTTTGCTATCACCTATGGTGTCAATTTTGCTTGCCTTACTGCCACTGTTGTTCATGTTCTCCTCTTCAATGGGAGAGACATCTGGGAGCTAAGCAAGTCTGCCTTCCAAGAGAAGAAGACAGATGTGCACACAAAGCTCATGAGAAGATATAAGCAAGTCCCTGGATGGTGGTTCGTATGTATCCTTGTGGCTAACATAGCCGCGACCATATTTACATGCCATTATTACAACGACCAATTGCAATTGCAATGGTGGGGGGTCTTGCTTGCTTGTGGTCTAGCCTTGTTTTTCACTCTACCTGTTGGAGTCATTTATGCCACAACCAATCAGATGCCAACTTTGAATGTGATCACAGAGTACATAATTGGGTATCTGTATCCGGGATATCCAGCTGCTAACATATTATTCAAAGTATATGGACACATAAGCATGAAACAAGGAATCAATTTTCTCGAAGACTTCAAGCTTGGACACTACATGAAGATTGCTCCTCGAGCAATGTTCATGGCACAGGTAGTTGGTACTATCATAGCAGCACTTGTGCATTTGGGAACTGCATGGTGGCTTATGAGCACAATCCCTGACATATGCGACAGGGCGTTACTACCAGCAGAGAGCCCATGGACTTGCCCCGGTGACCATGTCTTCTACGATGCTTCTGTTATCTGGGGCCTTGTCGGGCCTCGCAGAATCTTTGGGGACCTTGGCTACTATTCGGCTATCAACTGGTTTTTCTTAGCTGGGGCTATAGCTCCTGCCCTTGTTTGGCTTGCACACAAGACCTTCCCAACCAAACAATGGATTAGACTTATTACAATGCCTGTGCTCTTAGGGACAGTAGTCAACATGCCTCCAGCTACTGCTGTGAATTTCACTAGCTGGATCCTCATTGGATTCGCCTCAGGCTTTGTTGCTTACAGGTACTACCGCAGCTGGTGGAGCCGTCATAACTATGTGCTTTCTGGAGCTCTGGATGCTGGATTAGCCTTTATGGCGGTAATTTTGTACTTGTGTCTAGGGATGCAACATGTCCACTTAAAATGGTGGGGAAGTACGCCGGATGGTTGCCCGTTGGCTTCTTGCTCAACGGAGCCAGGTGTTCTGATTACGGGCTGTCCATTGACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006857 GO:0008150 GO:0015833 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0031226 GO:0035672 GO:0035673 GO:0042886 GO:0042887 GO:0044425 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OPT

Protein Analysis

563

Amino Acids

62.8

Weight (kDa)

8.27

Isoelectric Point (pI)

42.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
OPT	PF03169	13 - 526	6.2e-128	OPT oligopeptide transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

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Orthologous Genes (Group: OG0001550)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G10770 AT4G10770
fragaria_vesca	FvH4_1g11690 FvH4_1g11690 FvH4_1g11690 FvH4_1g11690 FvH4_1g11690 FvH4_5g11060 FvH4_5g11060 FvH4_5g11060 FvH4_5g11060 FvH4_5g11060
malus_domestica	MD02G1129900.v1.1 MD06G1116800.v1.1 MD14G1124200.v1.1
prunus_persica	Prupe.5G128100_v2.0.a1 Prupe.5G128100_v2.0.a1 Prupe.5G128100_v2.0.a1 Prupe.5G128100_v2.0.a1 Prupe.7G169800_v2.0.a1 Prupe.7G169800_v2.0.a1 Prupe.7G169800_v2.0.a1
pyrus_communis	pycom02g10180 pycom06g10890 pycom14g11000
rosa_chinensis	RchiOBHm_Chr2g0099261 RchiOBHm_Chr7g0186741
rosa_laevigata	RLG00000004820 RLG00000016866
rosa_multiflora	Rmu_co8201022.1_g000001 Rmu_co8437885.1_g000001 Rmu_co8448977.1_g000001 Rmu_sc0009734.1_g000005
rosa_roxburghii	Rroxscaffold_2G00143270 Rroxscaffold_3G00267870
rosa_rugosa	Rorug02G0078300 Rorug02G0078300 Rorug02G0078300 Rorug06G0476200 Rorug06G0476300
rosa_samantha	Rh2AG127500 Rh2BG130500 Rh2CG131700 Rh2DG132100 Rh7AG064300 Rh7BG080800 Rh7CG083200 Rh7DG084100
rosa_wichuraiana	Rw2G009840 Rw7G007210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	261
AccB7I	CCANNNNNTGG	3 cut(s)	101, 336, 1362
AccI	GTMKAC	1 cut(s)	464
AccII	CGCG	1 cut(s)	767
AciI	CCGC	3 cut(s)	765, 1492, 1559
AclWI	GGATC	4 cut(s)	221, 278, 1441, 1454
AcoI	YGGCCR	1 cut(s)	469
AcsI	RAATTY	1 cut(s)	1432
AcuI	CTGAAG	1 cut(s)	210
AfaI	GTAC	6 cut(s)	559, 923, 1087, 1487, 1571, 1618
AfiI	CCNNNNNNNGG	7 cut(s)	101, 201, 202, 336, 510, 1329, 1362
AflIII	ACRYGT	1 cut(s)	1591
AgsI	TTSAA	4 cut(s)	631, 907, 973, 1027
AjiI	CACGTC	1 cut(s)	462
AjnI	CCWGG	3 cut(s)	200, 724, 1657
AjuI	GAANNNNNNNTTGG	2 cut(s)	175, 207
Alw21I	GWGCWC	4 cut(s)	693, 1139, 1392, 1534
Alw26I	GTCTC	2 cut(s)	290, 633
Alw44I	GTGCAC	1 cut(s)	689
AlwI	GGATC	4 cut(s)	221, 278, 1441, 1454
AlwNI	CAGNNNCTG	1 cut(s)	1424
Ama87I	CYCGRG	1 cut(s)	1056
AoxI	GGCC	4 cut(s)	92, 469, 1234, 1244
ApaLI	GTGCAC	1 cut(s)	689
ApeKI	GCWGC	5 cut(s)	144, 359, 956, 1097, 1494
ApoI	RAATTY	1 cut(s)	1432
Asp700I	GAANNNNTTC	1 cut(s)	119
AspS9I	GGNCC	6 cut(s)	35, 294, 542, 1234, 1244, 1264
AsuC2I	CCSGG	3 cut(s)	168, 945, 1197
AsuHPI	GGTGA	2 cut(s)	565, 1211
AsuII	TTCGAA	1 cut(s)	16
AvaI	CYCGRG	1 cut(s)	1056
AvaII	GGWCC	4 cut(s)	35, 294, 542, 1264
AxyI	CCTNAGG	1 cut(s)	1465
BaeGI	GKGCMC	1 cut(s)	693
BamHI	GGATCC	1 cut(s)	1446
BanII	GRGCYC	2 cut(s)	1184, 1534
BbsI	GAAGAC	3 cut(s)	686, 1026, 1201
Bbv12I	GWGCWC	4 cut(s)	693, 1139, 1392, 1534
BbvI	GCAGC	5 cut(s)	156, 346, 943, 1109, 1506
BccI	CCATC	4 cut(s)	246, 443, 723, 1619
BceAI	ACGGC	1 cut(s)	1491
BciT130I	CCWGG	3 cut(s)	202, 726, 1659
BciVI	GTATCC	2 cut(s)	755, 951
BclI	TGATCA	1 cut(s)	912
BcnI	CCSGG	3 cut(s)	168, 945, 1197
BcoDI	GTCTC	2 cut(s)	290, 633
BfaI	CTAG	5 cut(s)	233, 245, 842, 1440, 1580
BfmI	CTRYAG	1 cut(s)	1311
BfuI	GTATCC	2 cut(s)	755, 951
BglI	GCCNNNNNGGC	1 cut(s)	1556
BisI	GCNGC	6 cut(s)	145, 360, 765, 957, 1098, 1495
BlpI	GCTNAGC	1 cut(s)	653
BlsI	GCNGC	6 cut(s)	146, 361, 766, 958, 1099, 1496
Bme1390I	CCNGG	6 cut(s)	168, 202, 726, 945, 1197, 1659
Bme18I	GGWCC	4 cut(s)	35, 294, 542, 1264
BmeT110I	CYCGRG	1 cut(s)	1056
BmgBI	CACGTC	1 cut(s)	462
BmgT120I	GGNCC	6 cut(s)	35, 294, 542, 1234, 1244, 1264
BmiI	GGNNCC	7 cut(s)	36, 543, 1235, 1265, 1448, 1505, 1656
BmrFI	CCNGG	6 cut(s)	168, 202, 726, 945, 1197, 1659
BmsI	GCATC	5 cut(s)	514, 885, 1207, 1528, 1575
BoxI	GACNNNNGTC	1 cut(s)	1403
BpiI	GAAGAC	3 cut(s)	686, 1026, 1201
BpmI	CTGGAG	2 cut(s)	1401, 1548
Bpu1102I	GCTNAGC	1 cut(s)	653
Bpu14I	TTCGAA	1 cut(s)	16
BpuMI	CCSGG	3 cut(s)	168, 945, 1197
BsaI	GGTCTC	1 cut(s)	290
BsaJI	CCNNGG	7 cut(s)	201, 313, 335, 724, 1184, 1195, 1267
Bsc4I	CCNNNNNNNGG	7 cut(s)	101, 201, 202, 336, 510, 1329, 1362
Bse118I	RCCGGY	1 cut(s)	467
Bse1I	ACTGG	2 cut(s)	330, 1295
Bse21I	CCTNAGG	1 cut(s)	1465
Bse3DI	GCAATG	4 cut(s)	71, 129, 818, 1068
BseBI	CCWGG	3 cut(s)	202, 726, 1659
BseDI	CCNNGG	7 cut(s)	201, 313, 335, 724, 1184, 1195, 1267
BseGI	GGATG	4 cut(s)	734, 1543, 1590, 1630
BseLI	CCNNNNNNNGG	7 cut(s)	101, 201, 202, 336, 510, 1329, 1362
BseMI	GCAATG	4 cut(s)	71, 129, 818, 1068
BseMII	CTCAG	2 cut(s)	459, 1479
BseNI	ACTGG	2 cut(s)	330, 1295
BseRI	GAGGAG	3 cut(s)	101, 614, 1044
BseSI	GKGCMC	1 cut(s)	693
BseXI	GCAGC	5 cut(s)	156, 346, 943, 1109, 1506
BseYI	CCCAGC	1 cut(s)	1304
Bsh1236I	CGCG	1 cut(s)	767
BshFI	GGCC	4 cut(s)	94, 471, 1236, 1246
BsiHKAI	GWGCWC	4 cut(s)	693, 1139, 1392, 1534
BsiHKCI	CYCGRG	1 cut(s)	1056
BsiSI	CCGG	6 cut(s)	167, 468, 511, 944, 1197, 1622
BslFI	GGGAC	3 cut(s)	707, 1277, 1411
BslI	CCNNNNNNNGG	7 cut(s)	101, 201, 202, 336, 510, 1329, 1362
BsmAI	GTCTC	2 cut(s)	290, 633
BsmFI	GGGAC	3 cut(s)	707, 1277, 1411
BsnI	GGCC	4 cut(s)	94, 471, 1236, 1246
Bso31I	GGTCTC	1 cut(s)	290
BsoBI	CYCGRG	1 cut(s)	1056
Bsp119I	TTCGAA	1 cut(s)	16
Bsp1286I	GDGCHC	5 cut(s)	693, 1139, 1184, 1392, 1534
Bsp143I	GATC	4 cut(s)	213, 270, 912, 1446
Bsp1720I	GCTNAGC	1 cut(s)	653
Bsp19I	CCATGG	2 cut(s)	335, 1184
BspACI	CCGC	3 cut(s)	765, 1492, 1559
BspANI	GGCC	4 cut(s)	94, 471, 1236, 1246
BspCNI	CTCAG	2 cut(s)	458, 1478
BspFNI	CGCG	1 cut(s)	767
BspHI	TCATGA	1 cut(s)	702
BspLI	GGNNCC	7 cut(s)	36, 543, 1235, 1265, 1448, 1505, 1656
BspPI	GGATC	4 cut(s)	221, 278, 1441, 1454
BspT104I	TTCGAA	1 cut(s)	16
BspTNI	GGTCTC	1 cut(s)	290
BsrDI	GCAATG	4 cut(s)	71, 129, 818, 1068
BsrFI	RCCGGY	1 cut(s)	467
BsrI	ACTGG	2 cut(s)	330, 1295
BssAI	RCCGGY	1 cut(s)	467
BssECI	CCNNGG	7 cut(s)	201, 313, 335, 724, 1184, 1195, 1267
BssMI	GATC	4 cut(s)	213, 270, 912, 1446
BssT1I	CCWWGG	4 cut(s)	313, 335, 1184, 1267
Bst2UI	CCWGG	3 cut(s)	202, 726, 1659
Bst4CI	ACNGT	2 cut(s)	610, 1402
Bst6I	CTCTTC	1 cut(s)	632
BstBI	TTCGAA	1 cut(s)	16
BstC8I	GCNNGC	3 cut(s)	595, 831, 1335
BstDEI	CTNAG	5 cut(s)	445, 653, 1300, 1393, 1465
BstDSI	CCRYGG	2 cut(s)	335, 1184
BstEII	GGTNACC	1 cut(s)	1199
BstF5I	GGATG	4 cut(s)	734, 1543, 1590, 1630
BstFNI	CGCG	1 cut(s)	767
BstKTI	GATC	4 cut(s)	216, 273, 915, 1449
BstMAI	GTCTC	2 cut(s)	290, 633
BstMBI	GATC	4 cut(s)	213, 270, 912, 1446
BstMWI	GCNNNNNNNGC	9 cut(s)	356, 368, 697, 761, 1058, 1503, 1538, 1547, 1556
BstNI	CCWGG	3 cut(s)	202, 726, 1659
BstNSI	RCATGY	4 cut(s)	54, 783, 1414, 1595
BstPAI	GACNNNNGTC	1 cut(s)	1403
BstPI	GGTNACC	1 cut(s)	1199
BstSCI	CCNGG	6 cut(s)	166, 200, 724, 943, 1195, 1657
BstSFI	CTRYAG	1 cut(s)	1311
BstSLI	GKGCMC	1 cut(s)	693
BstUI	CGCG	1 cut(s)	767
BstV1I	GCAGC	5 cut(s)	156, 346, 943, 1109, 1506
BstV2I	GAAGAC	3 cut(s)	686, 1026, 1201
BstX2I	RGATCY	2 cut(s)	213, 1446
BstYI	RGATCY	2 cut(s)	213, 1446
Bsu36I	CCTNAGG	1 cut(s)	1465
BsuI	GTATCC	2 cut(s)	755, 951
BsuRI	GGCC	4 cut(s)	94, 471, 1236, 1246
BtgI	CCRYGG	2 cut(s)	335, 1184
BtrI	CACGTC	1 cut(s)	462
BtsCI	GGATG	4 cut(s)	734, 1543, 1590, 1630
BtsIMutI	CAGTG	1 cut(s)	606
Cac8I	GCNNGC	3 cut(s)	595, 831, 1335
CaiI	CAGNNNCTG	1 cut(s)	1424
CciI	TCATGA	1 cut(s)	702
Cfr10I	RCCGGY	1 cut(s)	467
Cfr13I	GGNCC	6 cut(s)	35, 294, 542, 1234, 1244, 1264
Csp6I	GTAC	6 cut(s)	558, 922, 1086, 1486, 1570, 1617
CviQI	GTAC	6 cut(s)	558, 922, 1086, 1486, 1570, 1617
DdeI	CTNAG	5 cut(s)	445, 653, 1300, 1393, 1465
DpnI	GATC	4 cut(s)	215, 272, 914, 1448
DpnII	GATC	4 cut(s)	213, 270, 912, 1446
DrdI	GACNNNNNNGTC	1 cut(s)	261
DseDI	GACNNNNNNGTC	1 cut(s)	261
EaeI	YGGCCR	1 cut(s)	469
Eam1104I	CTCTTC	1 cut(s)	632
EarI	CTCTTC	1 cut(s)	632
Ecl136II	GAGCTC	1 cut(s)	1532
Eco130I	CCWWGG	4 cut(s)	313, 335, 1184, 1267
Eco24I	GRGCYC	2 cut(s)	1184, 1534
Eco31I	GGTCTC	1 cut(s)	290
Eco32I	GATATC	1 cut(s)	950
Eco47I	GGWCC	4 cut(s)	35, 294, 542, 1264
Eco53kI	GAGCTC	1 cut(s)	1532
Eco57I	CTGAAG	1 cut(s)	210
Eco81I	CCTNAGG	1 cut(s)	1465
Eco88I	CYCGRG	1 cut(s)	1056
Eco91I	GGTNACC	1 cut(s)	1199
EcoICRI	GAGCTC	1 cut(s)	1532
EcoO109I	RGGNCCY	4 cut(s)	35, 542, 1234, 1264
EcoO65I	GGTNACC	1 cut(s)	1199
EcoRII	CCWGG	3 cut(s)	200, 724, 1657
EcoRV	GATATC	1 cut(s)	950
EcoT14I	CCWWGG	4 cut(s)	313, 335, 1184, 1267
EcoT22I	ATGCAT	1 cut(s)	529
EcoT38I	GRGCYC	2 cut(s)	1184, 1534
ErhI	CCWWGG	4 cut(s)	313, 335, 1184, 1267
FalI	AAGNNNNNCTT	2 cut(s)	650, 682
FaqI	GGGAC	3 cut(s)	707, 1277, 1411
FauNDI	CATATG	1 cut(s)	1151
FbaI	TGATCA	1 cut(s)	912
FblI	GTMKAC	1 cut(s)	464
Fnu4HI	GCNGC	6 cut(s)	145, 360, 765, 957, 1098, 1495
FokI	GGATG	4 cut(s)	741, 1550, 1597, 1637
FriOI	GRGCYC	2 cut(s)	1184, 1534
Fsp4HI	GCNGC	6 cut(s)	145, 360, 765, 957, 1098, 1495
FspBI	CTAG	5 cut(s)	233, 245, 842, 1440, 1580
GluI	GCNGC	6 cut(s)	145, 360, 765, 957, 1098, 1495
GsaI	CCCAGC	1 cut(s)	1308
GsuI	CTGGAG	2 cut(s)	1401, 1548
HaeIII	GGCC	4 cut(s)	94, 471, 1236, 1246
HapII	CCGG	6 cut(s)	167, 468, 511, 944, 1197, 1622
HincII	GTYRAC	1 cut(s)	1408
HindII	GTYRAC	1 cut(s)	1408
HindIII	AAGCTT	1 cut(s)	1028
HinfI	GANTC	6 cut(s)	29, 115, 870, 1005, 1254, 1458
HpaII	CCGG	6 cut(s)	167, 468, 511, 944, 1197, 1622
HphI	GGTGA	2 cut(s)	565, 1211
Hpy166II	GTNNAC	6 cut(s)	64, 459, 465, 691, 1408, 1597
Hpy188I	TCNGA	3 cut(s)	448, 894, 1668
Hpy188III	TCNNGA	7 cut(s)	38, 252, 287, 703, 1016, 1527, 1535
Hpy8I	GTNNAC	6 cut(s)	64, 459, 465, 691, 1408, 1597
HpyAV	CCTTC	4 cut(s)	76, 442, 676, 1357
HpyCH4III	ACNGT	2 cut(s)	610, 1402
HpyCH4IV	ACGT	1 cut(s)	461
HpyF10VI	GCNNNNNNNGC	9 cut(s)	356, 368, 697, 761, 1058, 1503, 1538, 1547, 1556
HpyF3I	CTNAG	5 cut(s)	445, 653, 1300, 1393, 1465
HpySE526I	ACGT	1 cut(s)	461
Ksp22I	TGATCA	1 cut(s)	912
Kzo9I	GATC	4 cut(s)	213, 270, 912, 1446
LmnI	GCTCC	6 cut(s)	649, 1057, 1321, 1503, 1529, 1654
Lsp1109I	GCAGC	5 cut(s)	156, 346, 943, 1109, 1506
LweI	GCATC	5 cut(s)	514, 885, 1207, 1528, 1575
MaeI	CTAG	5 cut(s)	233, 245, 842, 1440, 1580
MaeII	ACGT	1 cut(s)	461
MaeIII	GTNAC	2 cut(s)	1164, 1199
MalI	GATC	4 cut(s)	215, 272, 914, 1448
MboI	GATC	4 cut(s)	213, 270, 912, 1446
MfeI	CAATTG	2 cut(s)	800, 806
MflI	RGATCY	2 cut(s)	213, 1446
MhlI	GDGCHC	5 cut(s)	693, 1139, 1184, 1392, 1534
MluCI	AATT	8 cut(s)	41, 586, 800, 806, 927, 1009, 1432, 1563
MlyI	GAGTC	1 cut(s)	879
MmeI	TCCRAC	1 cut(s)	847
Mph1103I	ATGCAT	1 cut(s)	529
MroXI	GAANNNNTTC	1 cut(s)	119
MseI	TTAA	1 cut(s)	1601
MslI	CAYNNNNRTG	3 cut(s)	992, 1515, 1687
MspA1I	CMGCKG	2 cut(s)	956, 1497
MspI	CCGG	6 cut(s)	167, 468, 511, 944, 1197, 1622
MspR9I	CCNGG	6 cut(s)	168, 202, 726, 945, 1197, 1659
MunI	CAATTG	2 cut(s)	800, 806
MvaI	CCWGG	3 cut(s)	202, 726, 1659
MvnI	CGCG	1 cut(s)	767
MwoI	GCNNNNNNNGC	9 cut(s)	356, 368, 697, 761, 1058, 1503, 1538, 1547, 1556
NciI	CCSGG	3 cut(s)	168, 945, 1197
NcoI	CCATGG	2 cut(s)	335, 1184
NdeI	CATATG	1 cut(s)	1151
NdeII	GATC	4 cut(s)	213, 270, 912, 1446
NlaIV	GGNNCC	7 cut(s)	36, 543, 1235, 1265, 1448, 1505, 1656
NmuCI	GTSAC	1 cut(s)	1199
NsiI	ATGCAT	1 cut(s)	529
NspI	RCATGY	4 cut(s)	54, 783, 1414, 1595
NspV	TTCGAA	1 cut(s)	16
PaeR7I	CTCGAG	1 cut(s)	1056
PagI	TCATGA	1 cut(s)	702
PciI	ACATGT	1 cut(s)	1591
PdmI	GAANNNNTTC	1 cut(s)	119
PfeI	GAWTC	5 cut(s)	29, 115, 1005, 1254, 1458
PflFI	GACNNNGTC	1 cut(s)	1205
PflMI	CCANNNNNTGG	3 cut(s)	101, 336, 1362
PfoI	TCCNGGA	1 cut(s)	943
PkrI	GCNGC	6 cut(s)	146, 361, 766, 958, 1099, 1496
PleI	GAGTC	1 cut(s)	878
PpsI	GAGTC	1 cut(s)	878
PpuMI	RGGWCCY	3 cut(s)	35, 542, 1264
PscI	ACATGT	1 cut(s)	1591
PshAI	GACNNNNGTC	1 cut(s)	1403
Psp124BI	GAGCTC	1 cut(s)	1534
Psp5II	RGGWCCY	3 cut(s)	35, 542, 1264
Psp6I	CCWGG	3 cut(s)	200, 724, 1657
PspEI	GGTNACC	1 cut(s)	1199
PspFI	CCCAGC	1 cut(s)	1304
PspGI	CCWGG	3 cut(s)	200, 724, 1657
PspN4I	GGNNCC	7 cut(s)	36, 543, 1235, 1265, 1448, 1505, 1656
PspPI	GGNCC	6 cut(s)	35, 294, 542, 1234, 1244, 1264
PspPPI	RGGWCCY	3 cut(s)	35, 542, 1264
PspXI	VCTCGAGB	1 cut(s)	1056
PstNI	CAGNNNCTG	1 cut(s)	1424
PsuI	RGATCY	2 cut(s)	213, 1446
PsyI	GACNNNGTC	1 cut(s)	1205
PvuII	CAGCTG	2 cut(s)	956, 1497
RsaI	GTAC	6 cut(s)	559, 923, 1087, 1487, 1571, 1618
RsaNI	GTAC	6 cut(s)	558, 922, 1086, 1486, 1570, 1617
RseI	CAYNNNNRTG	3 cut(s)	992, 1515, 1687
SacI	GAGCTC	1 cut(s)	1534
SaqAI	TTAA	1 cut(s)	1601
SatI	GCNGC	6 cut(s)	145, 360, 765, 957, 1098, 1495
Sau3AI	GATC	4 cut(s)	213, 270, 912, 1446
Sau96I	GGNCC	6 cut(s)	35, 294, 542, 1234, 1244, 1264
SchI	GAGTC	1 cut(s)	879
ScrFI	CCNGG	6 cut(s)	168, 202, 726, 945, 1197, 1659
SduI	GDGCHC	5 cut(s)	693, 1139, 1184, 1392, 1534
SfaNI	GCATC	5 cut(s)	514, 885, 1207, 1528, 1575
SfcI	CTRYAG	1 cut(s)	1311
Sfr274I	CTCGAG	1 cut(s)	1056
SfuI	TTCGAA	1 cut(s)	16
SinI	GGWCC	4 cut(s)	35, 294, 542, 1264
SlaI	CTCGAG	1 cut(s)	1056
SmiMI	CAYNNNNRTG	3 cut(s)	992, 1515, 1687
SmlI	CTYRAG	1 cut(s)	1056
SmoI	CTYRAG	1 cut(s)	1056
Sse9I	AATT	8 cut(s)	41, 586, 800, 806, 927, 1009, 1432, 1563
SsiI	CCGC	3 cut(s)	765, 1492, 1559
SspMI	CTAG	5 cut(s)	233, 245, 842, 1440, 1580
SstI	GAGCTC	1 cut(s)	1534
StyD4I	CCNGG	6 cut(s)	166, 200, 724, 943, 1195, 1657
StyI	CCWWGG	4 cut(s)	313, 335, 1184, 1267
TaaI	ACNGT	2 cut(s)	610, 1402
TaiI	ACGT	1 cut(s)	464
TaqI	TCGA	4 cut(s)	16, 288, 1017, 1057
TaqII	GACCGA	1 cut(s)	272
TasI	AATT	8 cut(s)	41, 586, 800, 806, 927, 1009, 1432, 1563
TatI	WGTACW	2 cut(s)	921, 1569
TauI	GCSGC	1 cut(s)	767
TfiI	GAWTC	5 cut(s)	29, 115, 1005, 1254, 1458
Tru1I	TTAA	1 cut(s)	1601
Tru9I	TTAA	1 cut(s)	1601
TscAI	CASTG	1 cut(s)	613
TseFI	GTSAC	1 cut(s)	1199
TseI	GCWGC	5 cut(s)	144, 359, 956, 1097, 1494
Tsp45I	GTSAC	1 cut(s)	1199
TspDTI	ATGAA	5 cut(s)	17, 605, 1010, 1057, 1058
TspGWI	ACGGA	1 cut(s)	1667
TspRI	CASTG	1 cut(s)	613
Tth111I	GACNNNGTC	1 cut(s)	1205
Van91I	CCANNNNNTGG	3 cut(s)	101, 336, 1362
VneI	GTGCAC	1 cut(s)	689
VpaK11BI	GGWCC	4 cut(s)	35, 294, 542, 1264
XapI	RAATTY	1 cut(s)	1432
XceI	RCATGY	4 cut(s)	54, 783, 1414, 1595
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1359
XhoI	CTCGAG	1 cut(s)	1056
XmiI	GTMKAC	1 cut(s)	464
XmnI	GAANNNNTTC	1 cut(s)	119
XspI	CTAG	5 cut(s)	233, 245, 842, 1440, 1580
Zsp2I	ATGCAT	1 cut(s)	529

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.