Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0003641

Physical Location & Seq

Genomic Coordinates Forward (+)

8559632 .. 8562108

Gene Structure 2477 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g15150.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1272 bp

ATGGAAGGCGGGGATGATCACTTCCATCACCACCACCACCACCACTACCAACAGCATCACCACCGCCCCAACTTCCCGTTTCAACTCCTTGATCAGAAGAAAGAAGACGAAGCCGCATCCTGTTCCAACAACTCCGCCGCCGCCAGTCCTTACCCTTCTCTAGCCATCTCCTCCGCCGTGGATCCGATCAACCCGTTAAACAACAACACCGCACCATCGTCCACCGCAGTCACCACCGCCGTCGCTGCCGAGCCCTCCAAGAAGCCTCCTCCCAAGCGCACCTCAACTAAAGACCGCCACACCAAAGTCGACGGCCGCGGGCGCCGCATTCGAATGCCGGCACTCTGCGCGGCCAGGGTGTTCCAGCTCACTCGCGAGCTGGGACACAAGTCCGACGGAGAAACAATCGAGTGGCTACTCCAGCAGGCCGAGCCGGCCGTGATCGCCGCCACCGGAACCGGCACGATCCCAGCTAACTTCACTTCTCTTAACATTTCGCTAAGAAGCTCCGGTTCAAGCATGTCGGTGCCGTCCCAGCTCAGACCTTCATATTACAGCCCCAATTTCTCGTCGTCCATACATCAGAGTAGTCAGAACCAGCGGCGGAATCTGTTTCAGGGTTTGGGCCTTTCGTCGTCGGACAGCTCGTCGACGCTGCTCAATTTCCAGACCAACACCATGCACTCTATGCTTCAGGCCAAGCAGGAGCTACGTGATACGGTGTCGTTGGACTTATCCGAGGCGGCTTCAGCGGCGGAGGGGAGCATGGGAAGGAAGAGAAGGCCGCCGGAGCAAGACTTGAATCAAATGGGAAGTGGGTATTTACTGCAGTCCAGCGCGGGAGCTATCCCGGCGAGCCACCACAGTCAGATTCCGGCGAATTTTTGGATGCTGGCGAATTCCACTAATCAAGCAGCAGTGATGAGCGGAGACCCAATTTGGACTTTTCCCTCGGTCAATAACAGTGGGTTGTACAGAGGCACCATGTCAGGCGGCTTGCATTTCATGAACTTCCCTACACCGGTAGCGCTGCTGCCTAGTCAGCAGCATATGGGGGGCTCCGGCGGCGGTGGAGGCGGAGATAACGGCGGAAATGACGGTAGTGGTGGAGATCATCATAATAACATGAACGACGGGCAGCTGAACATGCTGACCGGGCTGAACCCGTACCGGCACATGTCCTCGGACTCGCCGCATGAGCAGCAGGCCAGCGGGTCCCACTCGCACCACGGCGGCGACGACCGGCACGATAGTACTAGTCACCACTCGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0008283 GO:0009719 GO:0009725 GO:0009735 GO:0009737 GO:0009739 GO:0009791 GO:0009889 GO:0010029 GO:0010033 GO:0010229 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0031347 GO:0032501 GO:0032502 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048367 GO:0048580 GO:0048583 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051239 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0080134 GO:0090567 GO:0097305 GO:0140110 GO:1900140 GO:1901700 GO:1903506 GO:2000026 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TCP

Protein Analysis

424

Amino Acids

45.4

Weight (kDa)

6.74

Isoelectric Point (pI)

60.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TCP	PF03634	94 - 221	1.6e-34	TCP family transcription factor

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003641)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G69690
fragaria_vesca	FvH4_4g31520 FvH4_5g15150
malus_domestica	MD06G1191800.v1.1 MD13G1073500.v1.1 MD14G1198200.v1.1 MD16G1074800.v1.1
prunus_persica	Prupe.1G272500_v2.0.a1 Prupe.5G191200_v2.0.a1
pyrus_communis	pycom06g16990 pycom13g06580 pycom14g16460 pycom16g06480
rosa_chinensis	RchiOBHm_Chr4g0440011 RchiOBHm_Chr7g0181021
rosa_laevigata	RLG00000005218 RLG00000006215
rosa_multiflora	Rmu_sc0006000.1_g000009 Rmu_sc0007079.1_g000001
rosa_roxburghii	Rroxscaffold_3G00272330 Rroxscaffold_5G00380970
rosa_rugosa	Rorug04G0323300 Rorug06G0438600
rosa_samantha	Rh4AG295500 Rh4AG374300 Rh4BG301900 Rh4BG386600 Rh4CG401100 Rh4DG380900 Rh7AG039800 Rh7BG039200 Rh7CG041000 Rh7DG039400
rosa_wichuraiana	Rw4G032020 Rw7G003280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	321, 526, 980
AccBSI	CCGCTC	1 cut(s)	927
AccI	GTMKAC	2 cut(s)	309, 650
AccII	CGCG	4 cut(s)	318, 350, 375, 839
AclWI	GGATC	3 cut(s)	176, 189, 460
AcoI	YGGCCR	3 cut(s)	313, 351, 435
AcsI	RAATTY	2 cut(s)	880, 898
AcuI	CTGAAG	2 cut(s)	677, 732
AcyI	GRCGYC	1 cut(s)	322
AfaI	GTAC	3 cut(s)	974, 1169, 1255
AfeI	AGCGCT	1 cut(s)	1029
AfiI	CCNNNNNNNGG	1 cut(s)	1021
AflIII	ACRYGT	1 cut(s)	1176
AgeI	ACCGGT	1 cut(s)	1021
AgsI	TTSAA	3 cut(s)	83, 516, 802
AhdI	GACNNNNNGTC	1 cut(s)	646
AhlI	ACTAGT	1 cut(s)	1256
AjnI	CCWGG	1 cut(s)	353
AluBI	AGCT	9 cut(s)	367, 379, 473, 507, 538, 645, 709, 845, 1141
AluI	AGCT	9 cut(s)	367, 379, 473, 507, 538, 645, 709, 845, 1141
Alw26I	GTCTC	1 cut(s)	924
AlwI	GGATC	3 cut(s)	176, 189, 460
Aor51HI	AGCGCT	1 cut(s)	1029
AoxI	GGCC	8 cut(s)	313, 351, 426, 435, 625, 696, 782, 1206
ApeKI	GCWGC	8 cut(s)	245, 655, 914, 1030, 1033, 1045, 1138, 1201
ApoI	RAATTY	2 cut(s)	880, 898
AsiGI	ACCGGT	1 cut(s)	1021
AspLEI	GCGC	5 cut(s)	279, 324, 350, 839, 1030
AspS9I	GGNCC	2 cut(s)	625, 1215
AsuC2I	CCSGG	2 cut(s)	851, 1156
AsuHPI	GGTGA	4 cut(s)	20, 50, 223, 1253
AsuII	TTCGAA	1 cut(s)	331
AvaII	GGWCC	1 cut(s)	1215
BamHI	GGATCC	1 cut(s)	181
BanI	GGYRCC	3 cut(s)	321, 526, 980
BanII	GRGCYC	2 cut(s)	255, 1061
BbsI	GAAGAC	1 cut(s)	111
BbvI	GCAGC	8 cut(s)	232, 642, 926, 1017, 1020, 1057, 1150, 1213
BccI	CCATC	3 cut(s)	33, 173, 223
BceAI	ACGGC	7 cut(s)	161, 224, 328, 422, 514, 1102, 1246
BciT130I	CCWGG	1 cut(s)	355
BclI	TGATCA	2 cut(s)	16, 91
BcnI	CCSGG	2 cut(s)	851, 1156
BcoDI	GTCTC	1 cut(s)	924
BcuI	ACTAGT	1 cut(s)	1256
BfaI	CTAG	3 cut(s)	161, 1038, 1257
BfmI	CTRYAG	1 cut(s)	827
BfoI	RGCGCY	2 cut(s)	325, 1031
BglI	GCCNNNNNGGC	1 cut(s)	434
BmcAI	AGTACT	1 cut(s)	1255
Bme1390I	CCNGG	3 cut(s)	355, 851, 1156
Bme18I	GGWCC	1 cut(s)	1215
BmeRI	GACNNNNNGTC	1 cut(s)	646
BmgT120I	GGNCC	2 cut(s)	625, 1215
BmiI	GGNNCC	8 cut(s)	183, 323, 457, 528, 982, 1060, 1216, 1217
BmrFI	CCNGG	3 cut(s)	355, 851, 1156
BmsI	GCATC	3 cut(s)	64, 125, 879
BoxI	GACNNNNGTC	1 cut(s)	388
BpiI	GAAGAC	1 cut(s)	111
BpmI	CTGGAG	1 cut(s)	404
Bpu14I	TTCGAA	1 cut(s)	331
BpuMI	CCSGG	2 cut(s)	851, 1156
BsaAI	YACGTR	1 cut(s)	713
BsaHI	GRCGYC	1 cut(s)	322
BsaI	GGTCTC	1 cut(s)	924
BsaJI	CCNNGG	7 cut(s)	177, 316, 354, 738, 951, 1182, 1228
BsaWI	WCCGGW	3 cut(s)	452, 509, 1021
Bsc4I	CCNNNNNNNGG	1 cut(s)	1021
Bse118I	RCCGGY	6 cut(s)	337, 433, 458, 1021, 1170, 1242
Bse1I	ACTGG	1 cut(s)	144
BseBI	CCWGG	1 cut(s)	355
BseDI	CCNNGG	7 cut(s)	177, 316, 354, 738, 951, 1182, 1228
BseGI	GGATG	3 cut(s)	19, 116, 894
BseLI	CCNNNNNNNGG	1 cut(s)	1021
BseMII	CTCAG	1 cut(s)	553
BseNI	ACTGG	1 cut(s)	144
BseRI	GAGGAG	2 cut(s)	160, 258
BseX3I	CGGCCG	2 cut(s)	313, 435
BseXI	GCAGC	8 cut(s)	232, 642, 926, 1017, 1020, 1057, 1150, 1213
BseYI	CCCAGC	3 cut(s)	379, 469, 534
Bsh1236I	CGCG	4 cut(s)	318, 350, 375, 839
Bsh1285I	CGRYCG	3 cut(s)	316, 438, 1243
BshFI	GGCC	8 cut(s)	315, 353, 428, 437, 627, 698, 784, 1208
BshNI	GGYRCC	3 cut(s)	321, 526, 980
BshTI	ACCGGT	1 cut(s)	1021
BsiEI	CGRYCG	3 cut(s)	316, 438, 1243
BslFI	GGGAC	3 cut(s)	396, 517, 1201
BslI	CCNNNNNNNGG	1 cut(s)	1021
BsmAI	GTCTC	1 cut(s)	924
BsmFI	GGGAC	3 cut(s)	396, 517, 1201
BsmI	GAATGC	2 cut(s)	327, 339
BsnI	GGCC	8 cut(s)	315, 353, 428, 437, 627, 698, 784, 1208
Bso31I	GGTCTC	1 cut(s)	924
Bsp119I	TTCGAA	1 cut(s)	331
Bsp1286I	GDGCHC	2 cut(s)	255, 1061
Bsp1407I	TGTACA	1 cut(s)	972
Bsp143I	GATC	7 cut(s)	16, 91, 181, 186, 441, 465, 1111
Bsp68I	TCGCGA	1 cut(s)	375
BspANI	GGCC	8 cut(s)	315, 353, 428, 437, 627, 698, 784, 1208
BspCNI	CTCAG	1 cut(s)	552
BspFNI	CGCG	4 cut(s)	318, 350, 375, 839
BspHI	TCATGA	1 cut(s)	1005
BspLI	GGNNCC	8 cut(s)	183, 323, 457, 528, 982, 1060, 1216, 1217
BspMAI	CTGCAG	1 cut(s)	831
BspPI	GGATC	3 cut(s)	176, 189, 460
BspT104I	TTCGAA	1 cut(s)	331
BspT107I	GGYRCC	3 cut(s)	321, 526, 980
BspTNI	GGTCTC	1 cut(s)	924
BsrBI	CCGCTC	1 cut(s)	927
BsrFI	RCCGGY	6 cut(s)	337, 433, 458, 1021, 1170, 1242
BsrGI	TGTACA	1 cut(s)	972
BsrI	ACTGG	1 cut(s)	144
BssAI	RCCGGY	6 cut(s)	337, 433, 458, 1021, 1170, 1242
BssECI	CCNNGG	7 cut(s)	177, 316, 354, 738, 951, 1182, 1228
BssMI	GATC	7 cut(s)	16, 91, 181, 186, 441, 465, 1111
BssNI	GRCGYC	1 cut(s)	322
Bst2UI	CCWGG	1 cut(s)	355
Bst4CI	ACNGT	4 cut(s)	721, 866, 965, 1100
Bst6I	CTCTTC	1 cut(s)	770
BstACI	GRCGYC	1 cut(s)	322
BstAPI	GCANNNNNTGC	1 cut(s)	688
BstAUI	TGTACA	1 cut(s)	972
BstBAI	YACGTR	1 cut(s)	713
BstBI	TTCGAA	1 cut(s)	331
BstDEI	CTNAG	2 cut(s)	500, 539
BstDSI	CCRYGG	3 cut(s)	177, 316, 1228
BstF5I	GGATG	3 cut(s)	19, 116, 894
BstFNI	CGCG	4 cut(s)	318, 350, 375, 839
BstH2I	RGCGCY	2 cut(s)	325, 1031
BstHHI	GCGC	5 cut(s)	279, 324, 350, 839, 1030
BstKTI	GATC	7 cut(s)	19, 94, 184, 189, 444, 468, 1114
BstMAI	GTCTC	1 cut(s)	924
BstMBI	GATC	7 cut(s)	16, 91, 181, 186, 441, 465, 1111
BstMCI	CGRYCG	3 cut(s)	316, 438, 1243
BstNI	CCWGG	1 cut(s)	355
BstNSI	RCATGY	3 cut(s)	523, 1150, 1180
BstPAI	GACNNNNGTC	1 cut(s)	388
BstSCI	CCNGG	3 cut(s)	353, 849, 1154
BstSFI	CTRYAG	1 cut(s)	827
BstUI	CGCG	4 cut(s)	318, 350, 375, 839
BstV1I	GCAGC	8 cut(s)	232, 642, 926, 1017, 1020, 1057, 1150, 1213
BstV2I	GAAGAC	1 cut(s)	111
BstX2I	RGATCY	1 cut(s)	181
BstYI	RGATCY	1 cut(s)	181
BstZI	CGGCCG	2 cut(s)	313, 435
BsuRI	GGCC	8 cut(s)	315, 353, 428, 437, 627, 698, 784, 1208
BtgI	CCRYGG	3 cut(s)	177, 316, 1228
BtsCI	GGATG	3 cut(s)	19, 116, 894
BtsI	GCAGTG	1 cut(s)	924
BtsIMutI	CAGTG	2 cut(s)	924, 970
BtuMI	TCGCGA	1 cut(s)	375
CciI	TCATGA	1 cut(s)	1005
CfoI	GCGC	5 cut(s)	279, 324, 350, 839, 1030
Cfr10I	RCCGGY	6 cut(s)	337, 433, 458, 1021, 1170, 1242
Cfr13I	GGNCC	2 cut(s)	625, 1215
Cfr42I	CCGCGG	1 cut(s)	319
CseI	GACGC	1 cut(s)	661
Csp6I	GTAC	3 cut(s)	973, 1168, 1254
CspAI	ACCGGT	1 cut(s)	1021
CspCI	CAANNNNNGTGG	2 cut(s)	946, 981
CviAII	CATG	9 cut(s)	520, 679, 766, 985, 1006, 1126, 1147, 1177, 1196
CviQI	GTAC	3 cut(s)	973, 1168, 1254
DdeI	CTNAG	2 cut(s)	500, 539
DinI	GGCGCC	1 cut(s)	323
DpnI	GATC	7 cut(s)	18, 93, 183, 188, 443, 467, 1113
DpnII	GATC	7 cut(s)	16, 91, 181, 186, 441, 465, 1111
DriI	GACNNNNNGTC	1 cut(s)	646
EaeI	YGGCCR	3 cut(s)	313, 351, 435
EagI	CGGCCG	2 cut(s)	313, 435
Eam1104I	CTCTTC	1 cut(s)	770
Eam1105I	GACNNNNNGTC	1 cut(s)	646
EarI	CTCTTC	1 cut(s)	770
EciI	GGCGGA	6 cut(s)	124, 163, 619, 770, 1092, 1104
EclXI	CGGCCG	2 cut(s)	313, 435
Eco24I	GRGCYC	2 cut(s)	255, 1061
Eco31I	GGTCTC	1 cut(s)	924
Eco47I	GGWCC	1 cut(s)	1215
Eco47III	AGCGCT	1 cut(s)	1029
Eco52I	CGGCCG	2 cut(s)	313, 435
Eco57I	CTGAAG	2 cut(s)	677, 732
EcoO109I	RGGNCCY	1 cut(s)	1215
EcoRI	GAATTC	1 cut(s)	898
EcoRII	CCWGG	1 cut(s)	353
EcoT38I	GRGCYC	2 cut(s)	255, 1061
EgeI	GGCGCC	1 cut(s)	323
EheI	GGCGCC	1 cut(s)	323
FaeI	CATG	9 cut(s)	523, 682, 769, 988, 1009, 1129, 1150, 1180, 1199
FaqI	GGGAC	3 cut(s)	396, 517, 1201
FatI	CATG	9 cut(s)	519, 678, 765, 984, 1005, 1125, 1146, 1176, 1195
FauI	CCCGC	4 cut(s)	2, 311, 832, 1205
FauNDI	CATATG	1 cut(s)	1050
FbaI	TGATCA	2 cut(s)	16, 91
FblI	GTMKAC	2 cut(s)	309, 650
FokI	GGATG	3 cut(s)	26, 103, 901
FriOI	GRGCYC	2 cut(s)	255, 1061
FspBI	CTAG	3 cut(s)	161, 1038, 1257
GlaI	GCGC	5 cut(s)	278, 323, 349, 838, 1029
GsaI	CCCAGC	3 cut(s)	383, 473, 538
GsuI	CTGGAG	1 cut(s)	404
HaeII	RGCGCY	2 cut(s)	325, 1031
HaeIII	GGCC	8 cut(s)	315, 353, 428, 437, 627, 698, 784, 1208
HgaI	GACGC	1 cut(s)	661
HhaI	GCGC	5 cut(s)	279, 324, 350, 839, 1030
Hin1I	GRCGYC	1 cut(s)	322
Hin1II	CATG	9 cut(s)	523, 682, 769, 988, 1009, 1129, 1150, 1180, 1199
Hin6I	GCGC	5 cut(s)	277, 322, 348, 837, 1028
HinP1I	GCGC	5 cut(s)	277, 322, 348, 837, 1028
HincII	GTYRAC	2 cut(s)	310, 651
HindII	GTYRAC	2 cut(s)	310, 651
HinfI	GANTC	4 cut(s)	607, 802, 871, 1187
HphI	GGTGA	4 cut(s)	20, 50, 223, 1253
Hpy166II	GTNNAC	3 cut(s)	222, 310, 651
Hpy188III	TCNNGA	3 cut(s)	374, 667, 1006
Hpy8I	GTNNAC	3 cut(s)	222, 310, 651
HpyAV	CCTTC	4 cut(s)	165, 555, 765, 774
HpyCH4III	ACNGT	4 cut(s)	721, 866, 965, 1100
HpyCH4IV	ACGT	1 cut(s)	712
HpyCH4V	TGCA	3 cut(s)	682, 829, 1000
HpyF3I	CTNAG	2 cut(s)	500, 539
HpySE526I	ACGT	1 cut(s)	712
Hsp92I	GRCGYC	1 cut(s)	322
Hsp92II	CATG	9 cut(s)	523, 682, 769, 988, 1009, 1129, 1150, 1180, 1199
HspAI	GCGC	5 cut(s)	277, 322, 348, 837, 1028
KasI	GGCGCC	1 cut(s)	321
KflI	GGGWCCC	1 cut(s)	1215
KroI	GCCGGC	2 cut(s)	337, 433
KroNI	GCCGGC	2 cut(s)	339, 435
Ksp22I	TGATCA	2 cut(s)	16, 91
KspI	CCGCGG	1 cut(s)	319
Kzo9I	GATC	7 cut(s)	16, 91, 181, 186, 441, 465, 1111
LmnI	GCTCC	6 cut(s)	512, 706, 762, 790, 842, 1064
Lsp1109I	GCAGC	8 cut(s)	232, 642, 926, 1017, 1020, 1057, 1150, 1213
LweI	GCATC	3 cut(s)	64, 125, 879
MaeI	CTAG	3 cut(s)	161, 1038, 1257
MaeII	ACGT	1 cut(s)	712
MaeIII	GTNAC	2 cut(s)	229, 1259
MalI	GATC	7 cut(s)	18, 93, 183, 188, 443, 467, 1113
MbiI	CCGCTC	1 cut(s)	927
MboI	GATC	7 cut(s)	16, 91, 181, 186, 441, 465, 1111
MboII	GAAGA	3 cut(s)	109, 116, 787
MflI	RGATCY	1 cut(s)	181
MhlI	GDGCHC	2 cut(s)	255, 1061
MluCI	AATT	5 cut(s)	562, 661, 880, 898, 936
Mly113I	GGCGCC	1 cut(s)	322
MlyI	GAGTC	1 cut(s)	1181
MmeI	TCCRAC	4 cut(s)	150, 417, 618, 708
MroNI	GCCGGC	2 cut(s)	337, 433
MseI	TTAA	2 cut(s)	197, 489
MslI	CAYNNNNRTG	2 cut(s)	332, 524
MspA1I	CMGCKG	5 cut(s)	318, 601, 752, 1141, 1212
MspR9I	CCNGG	3 cut(s)	355, 851, 1156
Mva1269I	GAATGC	2 cut(s)	327, 339
MvaI	CCWGG	1 cut(s)	355
MvnI	CGCG	4 cut(s)	318, 350, 375, 839
NaeI	GCCGGC	2 cut(s)	339, 435
NarI	GGCGCC	1 cut(s)	322
NciI	CCSGG	2 cut(s)	851, 1156
NdeI	CATATG	1 cut(s)	1050
NdeII	GATC	7 cut(s)	16, 91, 181, 186, 441, 465, 1111
NgoMIV	GCCGGC	2 cut(s)	337, 433
NlaIII	CATG	9 cut(s)	523, 682, 769, 988, 1009, 1129, 1150, 1180, 1199
NlaIV	GGNNCC	8 cut(s)	183, 323, 457, 528, 982, 1060, 1216, 1217
NmeAIII	GCCGAG	2 cut(s)	274, 454
NmuCI	GTSAC	2 cut(s)	229, 1259
NruI	TCGCGA	1 cut(s)	375
NspI	RCATGY	3 cut(s)	523, 1150, 1180
NspV	TTCGAA	1 cut(s)	331
PagI	TCATGA	1 cut(s)	1005
PciI	ACATGT	1 cut(s)	1176
PcsI	WCGNNNNNNNCGW	3 cut(s)	644, 1236, 1245
PctI	GAATGC	2 cut(s)	327, 339
PdiI	GCCGGC	2 cut(s)	339, 435
PfeI	GAWTC	3 cut(s)	607, 802, 871
PinAI	ACCGGT	1 cut(s)	1021
PleI	GAGTC	1 cut(s)	1181
PluTI	GGCGCC	1 cut(s)	325
PpsI	GAGTC	1 cut(s)	1181
Ppu21I	YACGTR	1 cut(s)	713
PpuMI	RGGWCCY	1 cut(s)	1215
PscI	ACATGT	1 cut(s)	1176
PshAI	GACNNNNGTC	1 cut(s)	388
Psp5II	RGGWCCY	1 cut(s)	1215
Psp6I	CCWGG	1 cut(s)	353
PspFI	CCCAGC	3 cut(s)	379, 469, 534
PspGI	CCWGG	1 cut(s)	353
PspN4I	GGNNCC	8 cut(s)	183, 323, 457, 528, 982, 1060, 1216, 1217
PspPI	GGNCC	2 cut(s)	625, 1215
PspPPI	RGGWCCY	1 cut(s)	1215
PstI	CTGCAG	1 cut(s)	831
PsuI	RGATCY	1 cut(s)	181
PvuII	CAGCTG	1 cut(s)	1141
RruI	TCGCGA	1 cut(s)	375
RsaI	GTAC	3 cut(s)	974, 1169, 1255
RsaNI	GTAC	3 cut(s)	973, 1168, 1254
RseI	CAYNNNNRTG	2 cut(s)	332, 524
SacII	CCGCGG	1 cut(s)	319
SalI	GTCGAC	2 cut(s)	308, 649
SaqAI	TTAA	2 cut(s)	197, 489
Sau3AI	GATC	7 cut(s)	16, 91, 181, 186, 441, 465, 1111
Sau96I	GGNCC	2 cut(s)	625, 1215
ScaI	AGTACT	1 cut(s)	1255
SchI	GAGTC	1 cut(s)	1181
ScrFI	CCNGG	3 cut(s)	355, 851, 1156
SduI	GDGCHC	2 cut(s)	255, 1061
SfaNI	GCATC	3 cut(s)	64, 125, 879
SfcI	CTRYAG	1 cut(s)	827
SfiI	GGCCNNNNNGGCC	1 cut(s)	434
SfoI	GGCGCC	1 cut(s)	323
Sfr303I	CCGCGG	1 cut(s)	319
SfuI	TTCGAA	1 cut(s)	331
SgrBI	CCGCGG	1 cut(s)	319
SgrDI	CGTCGACG	1 cut(s)	649
SinI	GGWCC	1 cut(s)	1215
SmiMI	CAYNNNNRTG	2 cut(s)	332, 524
SpeI	ACTAGT	1 cut(s)	1256
Sse9I	AATT	5 cut(s)	562, 661, 880, 898, 936
SspDI	GGCGCC	1 cut(s)	321
SspMI	CTAG	3 cut(s)	161, 1038, 1257
StyD4I	CCNGG	3 cut(s)	353, 849, 1154
TaaI	ACNGT	4 cut(s)	721, 866, 965, 1100
TaiI	ACGT	1 cut(s)	715
TaqI	TCGA	4 cut(s)	309, 331, 408, 650
TaqII	GACCGA	1 cut(s)	943
TasI	AATT	5 cut(s)	562, 661, 880, 898, 936
TatI	WGTACW	2 cut(s)	972, 1253
TfiI	GAWTC	3 cut(s)	607, 802, 871
Tru1I	TTAA	2 cut(s)	197, 489
Tru9I	TTAA	2 cut(s)	197, 489
TscAI	CASTG	2 cut(s)	924, 970
TseFI	GTSAC	2 cut(s)	229, 1259
TseI	GCWGC	8 cut(s)	245, 655, 914, 1030, 1033, 1045, 1138, 1201
Tsp45I	GTSAC	2 cut(s)	229, 1259
TspDTI	ATGAA	4 cut(s)	537, 994, 1022, 1142
TspGWI	ACGGA	1 cut(s)	411
TspRI	CASTG	2 cut(s)	924, 970
VpaK11BI	GGWCC	1 cut(s)	1215
XapI	RAATTY	2 cut(s)	880, 898
XceI	RCATGY	3 cut(s)	523, 1150, 1180
XmiI	GTMKAC	2 cut(s)	309, 650
XspI	CTAG	3 cut(s)	161, 1038, 1257
ZrmI	AGTACT	1 cut(s)	1255

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.