Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0003641

Physical Location & Seq

Genomic Coordinates Reverse (-)

21074939 .. 21076222

Gene Structure 1284 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom06g16990.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1284 bp

ATGCGATCATGGAAGGAGGTGATCGATCATCAACTCCACCACCACCACCACCACCACTACCAACAACACCAACAACAATATCACCACCGTCCAAACTTCCCCTTCCAGTTGCTCGAGAAAAAAGAATTAGATCATCAAGAAGCGGCTTCTTGCTCCAACTCCACGTCCCCCTACCCTTCTCTAGCCATCACCACCGTCGACCCCACTACCAACAACAACACCTCCTCTACTCCCGCAGCCACAACCACCTCAGCTCTTCAAGCTTCTTCCGCCGAGCCCTCCAAAAAGCCACCCCCCAAGCGGACCTCCACCAAGGACCGCCACACTAAAGTCGACGGCCGCGGCCGCCGCATTCGAATGCCGGCCTTGTGTGCCGCCAGAGTCTTCCAGCTCACACGCGAGCTCGGCCACAAGTCCGACGGCGAAACCATCGAGTGGCTTCTTCAGCAGGCCGAGCCCGCCGTGATCGCAGCCACCGGTACCGGCACAATCCCTGCCAACTTCACGTCACTCAACATCTCACTCCGCAGTTCCGGCTCCAGCATGTCCGTCCCATCTCAGCTAAGATCCTCTTACTACAGCCCAAATTTCTCTCTTCACCAGAACCAGCGGCGTAGCCTCTTTCAGGGCATCGGCCTCTCGTCTTCTGACAGCTCCTCAACTCTCCTAAATTTCCAAACAAACTCCATGCACGCTTCCATGTTGCAAGCCAAGCAGGAGCTCCGCGATACAGTGTCATTAGATCTCTCGGAGGCGGCGTCGGCAGGGGAGGGGAGCATGGGAGGGAGGAAGCGTCGACCGCCAGAGCAGGACTTAAATCAAATGGGCGGCTGCGGCGGGGGTGGTGGAGGAGGGTACTTATTACAGTCAAGCACCGGTGCGGTGCCGGCCAGCCACCCACATAGTCAGATTCCGGCTAATTTTTGGATGCTGGCAAATTCTAACAACCAAGTTATGAGCGGAGACCCTATCTGGACTTTTCCAGCTTCGGTCAACAACAGTGGACTGTATAGAGGAACAATGCCCGGTGGCTTACATTTTATGAATTTCCCCGCCCCAGTCACCCTGTTGCCTAGTCAGCAACAATTAGGTGGCTCGGGCGGCGGCGGCGGTAGTAATGATGGAAATAACATGAGTGACGGGCAGCTGAATATGCTCGCCGGACTCAACCCCTATCGGCAGATGTCCGATACTGGTGTTTCAGACTCTCAGCAGGCGAGCGGATCCCACTCGCACCATGGCGGGGGCGACGATCGGCACGATAGTACTAGCCACCACTCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0008283 GO:0009719 GO:0009725 GO:0009735 GO:0009737 GO:0009739 GO:0009791 GO:0009889 GO:0010029 GO:0010033 GO:0010229 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0031347 GO:0032501 GO:0032502 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048367 GO:0048580 GO:0048583 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051239 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0080134 GO:0090567 GO:0097305 GO:0140110 GO:1900140 GO:1901700 GO:1903506 GO:2000026 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TCP

Protein Analysis

428

Amino Acids

45.89

Weight (kDa)

7.93

Isoelectric Point (pI)

61.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TCP	PF03634	102 - 217	2.8e-34	TCP family transcription factor

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0003641)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G69690
fragaria_vesca	FvH4_4g31520 FvH4_5g15150
malus_domestica	MD06G1191800.v1.1 MD13G1073500.v1.1 MD14G1198200.v1.1 MD16G1074800.v1.1
prunus_persica	Prupe.1G272500_v2.0.a1 Prupe.5G191200_v2.0.a1
pyrus_communis	pycom06g16990 pycom13g06580 pycom14g16460 pycom16g06480
rosa_chinensis	RchiOBHm_Chr4g0440011 RchiOBHm_Chr7g0181021
rosa_laevigata	RLG00000005218 RLG00000006215
rosa_multiflora	Rmu_sc0006000.1_g000009 Rmu_sc0007079.1_g000001
rosa_roxburghii	Rroxscaffold_3G00272330 Rroxscaffold_5G00380970
rosa_rugosa	Rorug04G0323300 Rorug06G0438600
rosa_samantha	Rh4AG295500 Rh4AG374300 Rh4BG301900 Rh4BG386600 Rh4CG401100 Rh4DG380900 Rh7AG039800 Rh7BG039200 Rh7CG041000 Rh7DG039400
rosa_wichuraiana	Rw4G032020 Rw7G003280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	479
AccB1I	GGYRCC	2 cut(s)	479, 883
AccB7I	CCANNNNNTGG	1 cut(s)	435
AccBSI	CCGCTC	2 cut(s)	960, 1221
AccI	GTMKAC	3 cut(s)	198, 333, 796
AccII	CGCG	3 cut(s)	342, 399, 726
AclWI	GGATC	3 cut(s)	561, 1218, 1231
AcoI	YGGCCR	4 cut(s)	337, 343, 406, 888
AcsI	RAATTY	4 cut(s)	586, 670, 937, 1045
AcuI	CTGAAG	1 cut(s)	428
AcyI	GRCGYC	1 cut(s)	758
AfaI	GTAC	3 cut(s)	481, 857, 1267
AfiI	CCNNNNNNNGG	4 cut(s)	300, 435, 625, 1243
AgeI	ACCGGT	2 cut(s)	476, 875
AgsI	TTSAA	1 cut(s)	260
AjiI	CACGTC	2 cut(s)	165, 507
AluBI	AGCT	9 cut(s)	254, 263, 391, 403, 562, 654, 721, 986, 1147
AluI	AGCT	9 cut(s)	254, 263, 391, 403, 562, 654, 721, 986, 1147
Alw21I	GWGCWC	2 cut(s)	405, 723
Alw26I	GTCTC	1 cut(s)	957
AlwI	GGATC	3 cut(s)	561, 1218, 1231
Ama87I	CYCGRG	2 cut(s)	113, 1096
AoxI	GGCC	7 cut(s)	337, 343, 363, 406, 450, 634, 888
ApeKI	GCWGC	4 cut(s)	236, 470, 831, 1144
ApoI	RAATTY	4 cut(s)	586, 670, 937, 1045
AsiGI	ACCGGT	2 cut(s)	476, 875
Asp718I	GGTACC	1 cut(s)	479
AspS9I	GGNCC	2 cut(s)	303, 316
AsuC2I	CCSGG	1 cut(s)	1026
AsuHPI	GGTGA	5 cut(s)	31, 74, 181, 590, 1054
AsuII	TTCGAA	1 cut(s)	355
AvaI	CYCGRG	2 cut(s)	113, 1096
AvaII	GGWCC	2 cut(s)	303, 316
BaeI	ACNNNNGTAYC	2 cut(s)	1182, 1215
BamHI	GGATCC	1 cut(s)	1223
BanI	GGYRCC	2 cut(s)	479, 883
BanII	GRGCYC	4 cut(s)	279, 405, 459, 723
BbsI	GAAGAC	2 cut(s)	376, 636
Bbv12I	GWGCWC	2 cut(s)	405, 723
BbvCI	CCTCAGC	1 cut(s)	250
BbvI	GCAGC	4 cut(s)	248, 482, 818, 1156
BccI	CCATC	4 cut(s)	194, 437, 562, 1115
BceAI	ACGGC	3 cut(s)	352, 436, 446
BcnI	CCSGG	1 cut(s)	1026
BcoDI	GTCTC	1 cut(s)	957
BfaI	CTAG	3 cut(s)	182, 1074, 1269
BfmI	CTRYAG	1 cut(s)	577
BglII	AGATCT	1 cut(s)	742
BmcAI	AGTACT	1 cut(s)	1267
Bme1390I	CCNGG	1 cut(s)	1026
Bme18I	GGWCC	2 cut(s)	303, 316
BmeT110I	CYCGRG	2 cut(s)	113, 1096
BmgBI	CACGTC	2 cut(s)	165, 507
BmgT120I	GGNCC	2 cut(s)	303, 316
BmiI	GGNNCC	4 cut(s)	481, 538, 885, 1225
BmrFI	CCNGG	1 cut(s)	1026
BmrI	ACTGGG	1 cut(s)	1052
BmsI	GCATC	2 cut(s)	639, 918
BmuI	ACTGGG	1 cut(s)	1052
BpiI	GAAGAC	2 cut(s)	376, 636
BpmI	CTGGAG	1 cut(s)	523
Bpu10I	CCTNAGC	1 cut(s)	250
Bpu14I	TTCGAA	1 cut(s)	355
BpuMI	CCSGG	1 cut(s)	1026
Bsa29I	ATCGAT	1 cut(s)	24
BsaHI	GRCGYC	1 cut(s)	758
BsaI	GGTCTC	1 cut(s)	957
BsaJI	CCNNGG	3 cut(s)	312, 340, 1237
BsaWI	WCCGGW	2 cut(s)	476, 875
BsaXI	ACNNNNNCTCC	6 cut(s)	206, 236, 743, 773, 778, 808
Bsc4I	CCNNNNNNNGG	4 cut(s)	300, 435, 625, 1243
Bse118I	RCCGGY	5 cut(s)	361, 476, 482, 875, 886
Bse1I	ACTGG	3 cut(s)	106, 1058, 1198
BseCI	ATCGAT	1 cut(s)	24
BseDI	CCNNGG	3 cut(s)	312, 340, 1237
BseGI	GGATG	1 cut(s)	933
BseLI	CCNNNNNNNGG	4 cut(s)	300, 435, 625, 1243
BseMII	CTCAG	3 cut(s)	264, 572, 1223
BseNI	ACTGG	3 cut(s)	106, 1058, 1198
BseRI	GAGGAG	3 cut(s)	214, 646, 864
BseX3I	CGGCCG	2 cut(s)	337, 343
BseXI	GCAGC	4 cut(s)	248, 482, 818, 1156
Bsh1236I	CGCG	3 cut(s)	342, 399, 726
Bsh1285I	CGRYCG	4 cut(s)	340, 346, 800, 1255
BshFI	GGCC	7 cut(s)	339, 345, 365, 408, 452, 636, 890
BshNI	GGYRCC	2 cut(s)	479, 883
BshTI	ACCGGT	2 cut(s)	476, 875
BshVI	ATCGAT	1 cut(s)	24
BsiEI	CGRYCG	4 cut(s)	340, 346, 800, 1255
BsiHKAI	GWGCWC	2 cut(s)	405, 723
BsiHKCI	CYCGRG	2 cut(s)	113, 1096
BsiSI	CCGG	9 cut(s)	362, 477, 483, 534, 876, 887, 914, 1026, 1161
BslFI	GGGAC	2 cut(s)	151, 536
BslI	CCNNNNNNNGG	4 cut(s)	300, 435, 625, 1243
BsmAI	GTCTC	1 cut(s)	957
BsmFI	GGGAC	2 cut(s)	151, 536
BsmI	GAATGC	2 cut(s)	351, 363
BsnI	GGCC	7 cut(s)	339, 345, 365, 408, 452, 636, 890
Bso31I	GGTCTC	1 cut(s)	957
BsoBI	CYCGRG	2 cut(s)	113, 1096
Bsp119I	TTCGAA	1 cut(s)	355
Bsp1286I	GDGCHC	4 cut(s)	279, 405, 459, 723
Bsp143I	GATC	9 cut(s)	5, 21, 25, 130, 465, 566, 742, 1223, 1252
Bsp19I	CCATGG	1 cut(s)	1237
BspANI	GGCC	7 cut(s)	339, 345, 365, 408, 452, 636, 890
BspCNI	CTCAG	3 cut(s)	263, 571, 1222
BspDI	ATCGAT	1 cut(s)	24
BspFNI	CGCG	3 cut(s)	342, 399, 726
BspLI	GGNNCC	4 cut(s)	481, 538, 885, 1225
BspPI	GGATC	3 cut(s)	561, 1218, 1231
BspQI	GCTCTTC	1 cut(s)	261
BspT104I	TTCGAA	1 cut(s)	355
BspT107I	GGYRCC	2 cut(s)	479, 883
BspTNI	GGTCTC	1 cut(s)	957
BsrBI	CCGCTC	2 cut(s)	960, 1221
BsrFI	RCCGGY	5 cut(s)	361, 476, 482, 875, 886
BsrI	ACTGG	3 cut(s)	106, 1058, 1198
BssAI	RCCGGY	5 cut(s)	361, 476, 482, 875, 886
BssECI	CCNNGG	3 cut(s)	312, 340, 1237
BssMI	GATC	9 cut(s)	5, 21, 25, 130, 465, 566, 742, 1223, 1252
BssNI	GRCGYC	1 cut(s)	758
BssT1I	CCWWGG	2 cut(s)	312, 1237
Bst4CI	ACNGT	6 cut(s)	89, 196, 733, 867, 1001, 1008
Bst6I	CTCTTC	2 cut(s)	261, 600
BstACI	GRCGYC	1 cut(s)	758
BstBI	TTCGAA	1 cut(s)	355
BstDEI	CTNAG	4 cut(s)	250, 558, 563, 1209
BstDSI	CCRYGG	2 cut(s)	340, 1237
BstENI	CCTNNNNNAGG	1 cut(s)	623
BstF5I	GGATG	1 cut(s)	933
BstFNI	CGCG	3 cut(s)	342, 399, 726
BstKTI	GATC	9 cut(s)	8, 24, 28, 133, 468, 569, 745, 1226, 1255
BstMAI	GTCTC	1 cut(s)	957
BstMBI	GATC	9 cut(s)	5, 21, 25, 130, 465, 566, 742, 1223, 1252
BstMCI	CGRYCG	4 cut(s)	340, 346, 800, 1255
BstNSI	RCATGY	1 cut(s)	547
BstSCI	CCNGG	1 cut(s)	1024
BstSFI	CTRYAG	1 cut(s)	577
BstUI	CGCG	3 cut(s)	342, 399, 726
BstV1I	GCAGC	4 cut(s)	248, 482, 818, 1156
BstV2I	GAAGAC	2 cut(s)	376, 636
BstX2I	RGATCY	3 cut(s)	566, 742, 1223
BstYI	RGATCY	3 cut(s)	566, 742, 1223
BstZI	CGGCCG	2 cut(s)	337, 343
Bsu15I	ATCGAT	1 cut(s)	24
BsuRI	GGCC	7 cut(s)	339, 345, 365, 408, 452, 636, 890
BsuTUI	ATCGAT	1 cut(s)	24
BtgI	CCRYGG	2 cut(s)	340, 1237
BtrI	CACGTC	2 cut(s)	165, 507
BtsCI	GGATG	1 cut(s)	933
BtsIMutI	CAGTG	2 cut(s)	738, 1006
CciNI	GCGGCCGC	1 cut(s)	343
Cfr10I	RCCGGY	5 cut(s)	361, 476, 482, 875, 886
Cfr13I	GGNCC	2 cut(s)	303, 316
Cfr42I	CCGCGG	1 cut(s)	343
ClaI	ATCGAT	1 cut(s)	24
CseI	GACGC	2 cut(s)	747, 782
Csp6I	GTAC	3 cut(s)	480, 856, 1266
CspAI	ACCGGT	2 cut(s)	476, 875
CspCI	CAANNNNNGTGG	2 cut(s)	982, 1017
CviAII	CATG	7 cut(s)	9, 544, 688, 700, 778, 1132, 1238
CviQI	GTAC	3 cut(s)	480, 856, 1266
DdeI	CTNAG	4 cut(s)	250, 558, 563, 1209
DpnI	GATC	9 cut(s)	7, 23, 27, 132, 467, 568, 744, 1225, 1254
DpnII	GATC	9 cut(s)	5, 21, 25, 130, 465, 566, 742, 1223, 1252
EaeI	YGGCCR	4 cut(s)	337, 343, 406, 888
EagI	CGGCCG	2 cut(s)	337, 343
Eam1104I	CTCTTC	2 cut(s)	261, 600
EarI	CTCTTC	2 cut(s)	261, 600
EciI	GGCGGA	1 cut(s)	259
Ecl136II	GAGCTC	2 cut(s)	403, 721
EclXI	CGGCCG	2 cut(s)	337, 343
Eco130I	CCWWGG	2 cut(s)	312, 1237
Eco24I	GRGCYC	4 cut(s)	279, 405, 459, 723
Eco31I	GGTCTC	1 cut(s)	957
Eco47I	GGWCC	2 cut(s)	303, 316
Eco52I	CGGCCG	2 cut(s)	337, 343
Eco53kI	GAGCTC	2 cut(s)	403, 721
Eco57I	CTGAAG	1 cut(s)	428
Eco88I	CYCGRG	2 cut(s)	113, 1096
EcoICRI	GAGCTC	2 cut(s)	403, 721
EcoNI	CCTNNNNNAGG	1 cut(s)	623
EcoT14I	CCWWGG	2 cut(s)	312, 1237
EcoT38I	GRGCYC	4 cut(s)	279, 405, 459, 723
ErhI	CCWWGG	2 cut(s)	312, 1237
FaeI	CATG	7 cut(s)	12, 547, 691, 703, 781, 1135, 1241
FalI	AAGNNNNNCTT	2 cut(s)	556, 588
FaqI	GGGAC	2 cut(s)	151, 536
FatI	CATG	7 cut(s)	8, 543, 687, 699, 777, 1131, 1237
FauI	CCCGC	5 cut(s)	241, 466, 830, 1060, 1235
FblI	GTMKAC	3 cut(s)	198, 333, 796
FokI	GGATG	1 cut(s)	940
FriOI	GRGCYC	4 cut(s)	279, 405, 459, 723
FspBI	CTAG	3 cut(s)	182, 1074, 1269
GsuI	CTGGAG	1 cut(s)	523
HaeIII	GGCC	7 cut(s)	339, 345, 365, 408, 452, 636, 890
HapII	CCGG	9 cut(s)	362, 477, 483, 534, 876, 887, 914, 1026, 1161
HgaI	GACGC	2 cut(s)	747, 782
Hin1I	GRCGYC	1 cut(s)	758
Hin1II	CATG	7 cut(s)	12, 547, 691, 703, 781, 1135, 1241
HincII	GTYRAC	4 cut(s)	199, 334, 797, 994
HindII	GTYRAC	4 cut(s)	199, 334, 797, 994
HindIII	AAGCTT	1 cut(s)	261
HinfI	GANTC	4 cut(s)	381, 910, 1164, 1205
HpaII	CCGG	9 cut(s)	362, 477, 483, 534, 876, 887, 914, 1026, 1161
HphI	GGTGA	5 cut(s)	31, 74, 181, 590, 1054
Hpy166II	GTNNAC	5 cut(s)	199, 334, 797, 994, 1004
Hpy188I	TCNGA	6 cut(s)	418, 649, 751, 909, 1189, 1204
Hpy188III	TCNNGA	3 cut(s)	115, 137, 973
Hpy8I	GTNNAC	5 cut(s)	199, 334, 797, 994, 1004
Hpy99I	CGWCG	6 cut(s)	200, 338, 422, 763, 798, 1253
HpyAV	CCTTC	3 cut(s)	7, 112, 186
HpyCH4III	ACNGT	6 cut(s)	89, 196, 733, 867, 1001, 1008
HpyCH4IV	ACGT	2 cut(s)	164, 506
HpyCH4V	TGCA	2 cut(s)	691, 706
HpyF3I	CTNAG	4 cut(s)	250, 558, 563, 1209
HpySE526I	ACGT	2 cut(s)	164, 506
Hsp92I	GRCGYC	1 cut(s)	758
Hsp92II	CATG	7 cut(s)	12, 547, 691, 703, 781, 1135, 1241
KpnI	GGTACC	1 cut(s)	483
KroI	GCCGGC	2 cut(s)	361, 886
KroNI	GCCGGC	2 cut(s)	363, 888
KspI	CCGCGG	1 cut(s)	343
Kzo9I	GATC	9 cut(s)	5, 21, 25, 130, 465, 566, 742, 1223, 1252
LguI	GCTCTTC	1 cut(s)	261
LmnI	GCTCC	6 cut(s)	158, 542, 659, 718, 726, 774
Lsp1109I	GCAGC	4 cut(s)	248, 482, 818, 1156
LweI	GCATC	2 cut(s)	639, 918
MaeI	CTAG	3 cut(s)	182, 1074, 1269
MaeII	ACGT	2 cut(s)	164, 506
MaeIII	GTNAC	3 cut(s)	507, 1060, 1136
MalI	GATC	9 cut(s)	7, 23, 27, 132, 467, 568, 744, 1225, 1254
MbiI	CCGCTC	2 cut(s)	960, 1221
MboI	GATC	9 cut(s)	5, 21, 25, 130, 465, 566, 742, 1223, 1252
MboII	GAAGA	6 cut(s)	248, 258, 376, 434, 587, 636
MflI	RGATCY	3 cut(s)	566, 742, 1223
MhlI	GDGCHC	4 cut(s)	279, 405, 459, 723
MluCI	AATT	7 cut(s)	125, 586, 670, 919, 937, 1045, 1085
MlyI	GAGTC	3 cut(s)	390, 1158, 1199
MmeI	TCCRAC	2 cut(s)	180, 441
MroNI	GCCGGC	2 cut(s)	361, 886
MseI	TTAA	1 cut(s)	815
MslI	CAYNNNNRTG	1 cut(s)	356
MspA1I	CMGCKG	3 cut(s)	342, 610, 1147
MspI	CCGG	9 cut(s)	362, 477, 483, 534, 876, 887, 914, 1026, 1161
MspR9I	CCNGG	1 cut(s)	1026
Mva1269I	GAATGC	2 cut(s)	351, 363
MvnI	CGCG	3 cut(s)	342, 399, 726
NaeI	GCCGGC	2 cut(s)	363, 888
NciI	CCSGG	1 cut(s)	1026
NcoI	CCATGG	1 cut(s)	1237
NdeII	GATC	9 cut(s)	5, 21, 25, 130, 465, 566, 742, 1223, 1252
NgoMIV	GCCGGC	2 cut(s)	361, 886
NlaIII	CATG	7 cut(s)	12, 547, 691, 703, 781, 1135, 1241
NlaIV	GGNNCC	4 cut(s)	481, 538, 885, 1225
NmeAIII	GCCGAG	3 cut(s)	298, 384, 478
NmuCI	GTSAC	3 cut(s)	507, 1060, 1136
NotI	GCGGCCGC	1 cut(s)	343
NspI	RCATGY	1 cut(s)	547
NspV	TTCGAA	1 cut(s)	355
PaeR7I	CTCGAG	1 cut(s)	113
PciSI	GCTCTTC	1 cut(s)	261
PcsI	WCGNNNNNNNCGW	2 cut(s)	755, 1257
PctI	GAATGC	2 cut(s)	351, 363
PdiI	GCCGGC	2 cut(s)	363, 888
PfeI	GAWTC	1 cut(s)	910
PflMI	CCANNNNNTGG	1 cut(s)	435
PinAI	ACCGGT	2 cut(s)	476, 875
Ple19I	CGATCG	1 cut(s)	1255
PleI	GAGTC	3 cut(s)	389, 1158, 1199
PpsI	GAGTC	3 cut(s)	389, 1158, 1199
Psp124BI	GAGCTC	2 cut(s)	405, 723
PspN4I	GGNNCC	4 cut(s)	481, 538, 885, 1225
PspPI	GGNCC	2 cut(s)	303, 316
PsuI	RGATCY	3 cut(s)	566, 742, 1223
PvuI	CGATCG	1 cut(s)	1255
PvuII	CAGCTG	1 cut(s)	1147
RsaI	GTAC	3 cut(s)	481, 857, 1267
RsaNI	GTAC	3 cut(s)	480, 856, 1266
RseI	CAYNNNNRTG	1 cut(s)	356
SacI	GAGCTC	2 cut(s)	405, 723
SacII	CCGCGG	1 cut(s)	343
SalI	GTCGAC	3 cut(s)	197, 332, 795
SapI	GCTCTTC	1 cut(s)	261
SaqAI	TTAA	1 cut(s)	815
Sau3AI	GATC	9 cut(s)	5, 21, 25, 130, 465, 566, 742, 1223, 1252
Sau96I	GGNCC	2 cut(s)	303, 316
ScaI	AGTACT	1 cut(s)	1267
SchI	GAGTC	3 cut(s)	390, 1158, 1199
ScrFI	CCNGG	1 cut(s)	1026
SduI	GDGCHC	4 cut(s)	279, 405, 459, 723
SfaNI	GCATC	2 cut(s)	639, 918
SfcI	CTRYAG	1 cut(s)	577
Sfr274I	CTCGAG	1 cut(s)	113
Sfr303I	CCGCGG	1 cut(s)	343
SfuI	TTCGAA	1 cut(s)	355
SgrAI	CRCCGGYG	1 cut(s)	875
SgrBI	CCGCGG	1 cut(s)	343
SinI	GGWCC	2 cut(s)	303, 316
SlaI	CTCGAG	1 cut(s)	113
SmiMI	CAYNNNNRTG	1 cut(s)	356
SmlI	CTYRAG	1 cut(s)	113
SmoI	CTYRAG	1 cut(s)	113
Sse9I	AATT	7 cut(s)	125, 586, 670, 919, 937, 1045, 1085
SspMI	CTAG	3 cut(s)	182, 1074, 1269
SstI	GAGCTC	2 cut(s)	405, 723
StyD4I	CCNGG	1 cut(s)	1024
StyI	CCWWGG	2 cut(s)	312, 1237
TaaI	ACNGT	6 cut(s)	89, 196, 733, 867, 1001, 1008
TaiI	ACGT	2 cut(s)	167, 509
TaqI	TCGA	7 cut(s)	24, 114, 198, 333, 355, 432, 796
TaqII	GACCGA	1 cut(s)	979
TasI	AATT	7 cut(s)	125, 586, 670, 919, 937, 1045, 1085
TatI	WGTACW	1 cut(s)	1265
TfiI	GAWTC	1 cut(s)	910
Tru1I	TTAA	1 cut(s)	815
Tru9I	TTAA	1 cut(s)	815
TscAI	CASTG	2 cut(s)	738, 1006
TseFI	GTSAC	3 cut(s)	507, 1060, 1136
TseI	GCWGC	4 cut(s)	236, 470, 831, 1144
Tsp45I	GTSAC	3 cut(s)	507, 1060, 1136
TspDTI	ATGAA	1 cut(s)	1058
TspGWI	ACGGA	1 cut(s)	538
TspRI	CASTG	2 cut(s)	738, 1006
Van91I	CCANNNNNTGG	1 cut(s)	435
VpaK11BI	GGWCC	2 cut(s)	303, 316
XagI	CCTNNNNNAGG	1 cut(s)	623
XapI	RAATTY	4 cut(s)	586, 670, 937, 1045
XceI	RCATGY	1 cut(s)	547
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1235
XhoI	CTCGAG	1 cut(s)	113
XmiI	GTMKAC	3 cut(s)	198, 333, 796
XspI	CTAG	3 cut(s)	182, 1074, 1269
ZrmI	AGTACT	1 cut(s)	1267

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.