Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0003641

Physical Location & Seq

Genomic Coordinates Forward (+)

5227692 .. 5228900

Gene Structure 1209 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1074800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1209 bp

ATGATCATGGAAGCAGATAATGGGATCCGCTGCAGGCCCAATTTTCCACTACAATTCATCGACAAAACCAACCAAGTCGATGACGATCCAGAACCAGCTGCTGCATGCTCTACTGTCGCCGACCCCGGCTCAGACCTCCACCGAACCGGTTCGTCTATCCAAGAACAACAACCCAGTAACAAGAAGCCTCCTGCGAAGAGGACATCCACCAAAGATAGGCACACCAAAGTGGACGGGAGGGGCCGCCGCATCCGCATGCCTGCCACGTGCGCAGCTAGGGTTTTCCAGCTCACGCGGGAGCTAGGGCACAAGTCCGACGGCGAGACCATCGAGTGGCTCCTCCAGCAGGCCGAACCTTCTGTCATCGCCGCCACTGGAACCGGCACCATTCCCGCCAACTTCACCTCCCTTAACATCTCGCTCAGGAGCTCCGGGTCCAGCATGTCGGCGCCGTCGCACTACTTGAGGACTAACGCAAGTAATTATTACTTCAACTCCAACAACTTCGGAGCAGCTGCCTCCACCTCGCAGTTGGTTACGGAGGAGAACGCGCAGCGCGGAAGGATTTTGTTTCCCGGTGCAGGGTTAATGTCGTCTGAGAATTCTCCTCCGTCGTCGATGTTGTGGAATTTCAATCATTCTGGCAATAATAATGTGAGTAATAATGCAATGTTGGAAGCCAAGCAAGAGTTAGGTGATCATCATCAGGCTGTTACTCTCGATGAGGCTAGTAGCATGGCAAGAAAGCGGATTCGGCCGGAGCAAGATTTGTTATCGGCTAGTACGGGCCCGATTCCGGCTAGTCAAAATACAACTCCGGCGACGTTTTGGATGGTGGCAAATAATAACCCTAGTAGTAGCCAAGGGAGTATTCATCACGAGCACACTAATTCCATTAATCCCATGTGGACAATTCCGACAATTGGCAACGCCGGCAATATGTATAGGGGGCCAGTGGCTGGAGGCAGCCACGGCCTACATTTTATGAATTTCGCTTCTCCAATGGCTATATTGCCTGGCCAACAATTGGGGTTGGGATCAAGTACAACGAGTCATGGCGCCGCTGACAGCCACTTGGGTGTGCTGGCGGCGCTCAACGCATATCGGCCTATTCTAGGCGGGGTAGCCATGGAGTCTACTGCGAACGGGCAGCATCATCCGCACCATGGAGCGGACGAGGGACATGATCGTAATACCAATGCTAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003700 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006355 GO:0006725 GO:0006807 GO:0007049 GO:0007275 GO:0007623 GO:0008150 GO:0008152 GO:0008283 GO:0009058 GO:0009059 GO:0009719 GO:0009725 GO:0009735 GO:0009791 GO:0009889 GO:0009908 GO:0009962 GO:0009987 GO:0010033 GO:0010229 GO:0010252 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022402 GO:0022414 GO:0031323 GO:0031326 GO:0031537 GO:0031540 GO:0032501 GO:0032502 GO:0034641 GO:0034645 GO:0042023 GO:0042221 GO:0042592 GO:0043170 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044786 GO:0046483 GO:0048367 GO:0048438 GO:0048467 GO:0048511 GO:0048608 GO:0048731 GO:0048856 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0065008 GO:0071704 GO:0080090 GO:0090304 GO:0090567 GO:0140110 GO:1901360 GO:1901576 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TCP

Protein Analysis

403

Amino Acids

43.03

Weight (kDa)

6.83

Isoelectric Point (pI)

43.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TCP	PF03634	68 - 254	5.1e-35	TCP family transcription factor

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003641)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G69690
fragaria_vesca	FvH4_4g31520 FvH4_5g15150
malus_domestica	MD06G1191800.v1.1 MD13G1073500.v1.1 MD14G1198200.v1.1 MD16G1074800.v1.1
prunus_persica	Prupe.1G272500_v2.0.a1 Prupe.5G191200_v2.0.a1
pyrus_communis	pycom06g16990 pycom13g06580 pycom14g16460 pycom16g06480
rosa_chinensis	RchiOBHm_Chr4g0440011 RchiOBHm_Chr7g0181021
rosa_laevigata	RLG00000005218 RLG00000006215
rosa_multiflora	Rmu_sc0006000.1_g000009 Rmu_sc0007079.1_g000001
rosa_roxburghii	Rroxscaffold_3G00272330 Rroxscaffold_5G00380970
rosa_rugosa	Rorug04G0323300 Rorug06G0438600
rosa_samantha	Rh4AG295500 Rh4AG374300 Rh4BG301900 Rh4BG386600 Rh4CG401100 Rh4DG380900 Rh7AG039800 Rh7BG039200 Rh7CG041000 Rh7DG039400
rosa_wichuraiana	Rw4G032020 Rw7G003280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	271
AccB1I	GGYRCC	3 cut(s)	383, 448, 1058
AccB7I	CCANNNNNTGG	3 cut(s)	333, 959, 1027
AccBSI	CCGCTC	1 cut(s)	1172
AccI	GTMKAC	1 cut(s)	1136
AccII	CGCG	3 cut(s)	295, 551, 558
AclWI	GGATC	4 cut(s)	19, 32, 80, 1045
AcoI	YGGCCR	2 cut(s)	755, 1018
AcsI	RAATTY	3 cut(s)	601, 628, 988
AcvI	CACGTG	1 cut(s)	267
AcyI	GRCGYC	2 cut(s)	449, 1059
AfaI	GTAC	2 cut(s)	784, 1045
AgeI	ACCGGT	1 cut(s)	146
AgsI	TTSAA	2 cut(s)	493, 634
AjnI	CCWGG	1 cut(s)	1015
AjuI	GAANNNNNNNTTGG	2 cut(s)	855, 887
AleI	CACNNNNGTG	2 cut(s)	227, 1077
AluBI	AGCT	6 cut(s)	98, 275, 289, 301, 429, 515
AluI	AGCT	6 cut(s)	98, 275, 289, 301, 429, 515
Alw21I	GWGCWC	2 cut(s)	431, 885
Alw26I	GTCTC	1 cut(s)	317
AlwI	GGATC	4 cut(s)	19, 32, 80, 1045
AlwNI	CAGNNNCTG	2 cut(s)	101, 959
AoxI	GGCC	9 cut(s)	35, 241, 348, 755, 787, 950, 973, 1018, 1106
ApaI	GGGCCC	1 cut(s)	791
ApeKI	GCWGC	9 cut(s)	30, 98, 101, 272, 512, 515, 553, 966, 1150
ApoI	RAATTY	3 cut(s)	601, 628, 988
ArsI	GACNNNNNNTTYG	2 cut(s)	345, 377
AseI	ATTAAT	1 cut(s)	897
AsiGI	ACCGGT	1 cut(s)	146
Asp700I	GAANNNNTTC	1 cut(s)	148
AspLEI	GCGC	6 cut(s)	272, 451, 553, 558, 1061, 1093
AspS9I	GGNCC	6 cut(s)	36, 241, 435, 787, 788, 950
AsuC2I	CCSGG	3 cut(s)	126, 433, 576
AsuHPI	GGTGA	2 cut(s)	394, 707
AvaII	GGWCC	1 cut(s)	435
BaeGI	GKGCMC	2 cut(s)	309, 791
BalI	TGGCCA	1 cut(s)	1020
BamHI	GGATCC	1 cut(s)	24
BanI	GGYRCC	3 cut(s)	383, 448, 1058
BanII	GRGCYC	2 cut(s)	431, 791
BauI	CACGAG	1 cut(s)	878
BbrPI	CACGTG	1 cut(s)	267
Bbv12I	GWGCWC	2 cut(s)	431, 885
BbvI	GCAGC	9 cut(s)	17, 85, 88, 284, 502, 524, 565, 978, 1162
BccI	CCATC	2 cut(s)	335, 826
BceAI	ACGGC	3 cut(s)	334, 436, 988
BciT130I	CCWGG	1 cut(s)	1017
BclI	TGATCA	2 cut(s)	3, 697
BcnI	CCSGG	3 cut(s)	126, 433, 576
BcoDI	GTCTC	1 cut(s)	317
BfaI	CTAG	8 cut(s)	276, 302, 729, 780, 801, 852, 1115, 1203
BfmI	CTRYAG	1 cut(s)	31
BfoI	RGCGCY	3 cut(s)	452, 1062, 1094
Bme1390I	CCNGG	4 cut(s)	126, 433, 576, 1017
Bme18I	GGWCC	1 cut(s)	435
BmgT120I	GGNCC	6 cut(s)	36, 241, 435, 787, 788, 950
BmrFI	CCNGG	4 cut(s)	126, 433, 576, 1017
BmrI	ACTGGG	1 cut(s)	168
BmsI	GCATC	2 cut(s)	258, 1162
BmuI	ACTGGG	1 cut(s)	168
BpmI	CTGGAG	2 cut(s)	326, 981
Bpu10I	CCTNAGC	1 cut(s)	422
BpuEI	CTTGAG	1 cut(s)	484
BpuMI	CCSGG	3 cut(s)	126, 433, 576
BsaAI	YACGTR	1 cut(s)	267
BsaBI	GATNNNNATC	2 cut(s)	84, 702
BsaHI	GRCGYC	2 cut(s)	449, 1059
BsaI	GGTCTC	1 cut(s)	317
BsaJI	CCNNGG	5 cut(s)	124, 862, 970, 1128, 1165
BsaWI	WCCGGW	1 cut(s)	146
BsaXI	ACNNNNNCTCC	4 cut(s)	389, 419, 479, 509
Bse118I	RCCGGY	3 cut(s)	146, 380, 932
Bse1I	ACTGG	3 cut(s)	174, 379, 953
Bse3DI	GCAATG	1 cut(s)	675
Bse8I	GATNNNNATC	2 cut(s)	84, 702
BseBI	CCWGG	1 cut(s)	1017
BseDI	CCNNGG	5 cut(s)	124, 862, 970, 1128, 1165
BseGI	GGATG	4 cut(s)	203, 249, 837, 1156
BseJI	GATNNNNATC	2 cut(s)	84, 702
BseMI	GCAATG	1 cut(s)	675
BseMII	CTCAG	3 cut(s)	144, 436, 588
BseNI	ACTGG	3 cut(s)	174, 379, 953
BseRI	GAGGAG	3 cut(s)	329, 557, 597
BseSI	GKGCMC	2 cut(s)	309, 791
BseX3I	CGGCCG	1 cut(s)	755
BseXI	GCAGC	9 cut(s)	17, 85, 88, 284, 502, 524, 565, 978, 1162
BsgI	GTGCAG	1 cut(s)	600
Bsh1236I	CGCG	3 cut(s)	295, 551, 558
Bsh1285I	CGRYCG	1 cut(s)	758
BshFI	GGCC	9 cut(s)	37, 243, 350, 757, 789, 952, 975, 1020, 1108
BshNI	GGYRCC	3 cut(s)	383, 448, 1058
BshTI	ACCGGT	1 cut(s)	146
BsiEI	CGRYCG	1 cut(s)	758
BsiHKAI	GWGCWC	2 cut(s)	431, 885
BsiSI	CCGG	9 cut(s)	126, 147, 381, 432, 576, 758, 797, 818, 933
BslFI	GGGAC	1 cut(s)	1194
BsmAI	GTCTC	1 cut(s)	317
BsmFI	GGGAC	1 cut(s)	1194
BsnI	GGCC	9 cut(s)	37, 243, 350, 757, 789, 952, 975, 1020, 1108
Bso31I	GGTCTC	1 cut(s)	317
Bsp120I	GGGCCC	1 cut(s)	787
Bsp1286I	GDGCHC	4 cut(s)	309, 431, 791, 885
Bsp143I	GATC	6 cut(s)	3, 24, 85, 697, 1037, 1186
Bsp19I	CCATGG	2 cut(s)	1128, 1165
BspANI	GGCC	9 cut(s)	37, 243, 350, 757, 789, 952, 975, 1020, 1108
BspCNI	CTCAG	3 cut(s)	143, 435, 589
BspFNI	CGCG	3 cut(s)	295, 551, 558
BspMAI	CTGCAG	1 cut(s)	35
BspPI	GGATC	4 cut(s)	19, 32, 80, 1045
BspT107I	GGYRCC	3 cut(s)	383, 448, 1058
BspTNI	GGTCTC	1 cut(s)	317
BsrBI	CCGCTC	1 cut(s)	1172
BsrDI	GCAATG	1 cut(s)	675
BsrFI	RCCGGY	3 cut(s)	146, 380, 932
BsrI	ACTGG	3 cut(s)	174, 379, 953
BssAI	RCCGGY	3 cut(s)	146, 380, 932
BssECI	CCNNGG	5 cut(s)	124, 862, 970, 1128, 1165
BssMI	GATC	6 cut(s)	3, 24, 85, 697, 1037, 1186
BssNI	GRCGYC	2 cut(s)	449, 1059
BssSI	CACGAG	1 cut(s)	878
BssT1I	CCWWGG	3 cut(s)	862, 1128, 1165
Bst2BI	CACGAG	1 cut(s)	878
Bst2UI	CCWGG	1 cut(s)	1017
Bst4CI	ACNGT	1 cut(s)	115
Bst6I	CTCTTC	1 cut(s)	191
BstACI	GRCGYC	2 cut(s)	449, 1059
BstBAI	YACGTR	1 cut(s)	267
BstC8I	GCNNGC	7 cut(s)	35, 106, 257, 261, 348, 934, 1086
BstDEI	CTNAG	3 cut(s)	130, 422, 597
BstDSI	CCRYGG	3 cut(s)	970, 1128, 1165
BstENI	CCTNNNNNAGG	2 cut(s)	344, 1113
BstF5I	GGATG	4 cut(s)	203, 249, 837, 1156
BstFNI	CGCG	3 cut(s)	295, 551, 558
BstH2I	RGCGCY	3 cut(s)	452, 1062, 1094
BstHHI	GCGC	6 cut(s)	272, 451, 553, 558, 1061, 1093
BstKTI	GATC	6 cut(s)	6, 27, 88, 700, 1040, 1189
BstMAI	GTCTC	1 cut(s)	317
BstMBI	GATC	6 cut(s)	3, 24, 85, 697, 1037, 1186
BstMCI	CGRYCG	1 cut(s)	758
BstMWI	GCNNNNNNNGC	9 cut(s)	252, 269, 343, 754, 933, 972, 1090, 1097, 1159
BstNI	CCWGG	1 cut(s)	1017
BstNSI	RCATGY	3 cut(s)	108, 259, 445
BstSCI	CCNGG	4 cut(s)	124, 431, 574, 1015
BstSFI	CTRYAG	1 cut(s)	31
BstSLI	GKGCMC	2 cut(s)	309, 791
BstUI	CGCG	3 cut(s)	295, 551, 558
BstV1I	GCAGC	9 cut(s)	17, 85, 88, 284, 502, 524, 565, 978, 1162
BstX2I	RGATCY	1 cut(s)	24
BstYI	RGATCY	1 cut(s)	24
BstZI	CGGCCG	1 cut(s)	755
BsuRI	GGCC	9 cut(s)	37, 243, 350, 757, 789, 952, 975, 1020, 1108
BtgI	CCRYGG	3 cut(s)	970, 1128, 1165
BtgZI	GCGATG	1 cut(s)	349
BtsCI	GGATG	4 cut(s)	203, 249, 837, 1156
BtsIMutI	CAGTG	2 cut(s)	372, 960
Cac8I	GCNNGC	7 cut(s)	35, 106, 257, 261, 348, 934, 1086
CaiI	CAGNNNCTG	2 cut(s)	101, 959
CfoI	GCGC	6 cut(s)	272, 451, 553, 558, 1061, 1093
Cfr10I	RCCGGY	3 cut(s)	146, 380, 932
Cfr13I	GGNCC	6 cut(s)	36, 241, 435, 787, 788, 950
Csp6I	GTAC	2 cut(s)	783, 1044
CspAI	ACCGGT	1 cut(s)	146
CviQI	GTAC	2 cut(s)	783, 1044
DdeI	CTNAG	3 cut(s)	130, 422, 597
DinI	GGCGCC	2 cut(s)	450, 1060
DpnI	GATC	6 cut(s)	5, 26, 87, 699, 1039, 1188
DpnII	GATC	6 cut(s)	3, 24, 85, 697, 1037, 1186
EaeI	YGGCCR	2 cut(s)	755, 1018
EagI	CGGCCG	1 cut(s)	755
Eam1104I	CTCTTC	1 cut(s)	191
EarI	CTCTTC	1 cut(s)	191
Ecl136II	GAGCTC	1 cut(s)	429
EclXI	CGGCCG	1 cut(s)	755
Eco130I	CCWWGG	3 cut(s)	862, 1128, 1165
Eco24I	GRGCYC	2 cut(s)	431, 791
Eco31I	GGTCTC	1 cut(s)	317
Eco47I	GGWCC	1 cut(s)	435
Eco52I	CGGCCG	1 cut(s)	755
Eco53kI	GAGCTC	1 cut(s)	429
Eco72I	CACGTG	1 cut(s)	267
EcoICRI	GAGCTC	1 cut(s)	429
EcoNI	CCTNNNNNAGG	2 cut(s)	344, 1113
EcoRI	GAATTC	1 cut(s)	601
EcoRII	CCWGG	1 cut(s)	1015
EcoT14I	CCWWGG	3 cut(s)	862, 1128, 1165
EcoT38I	GRGCYC	2 cut(s)	431, 791
EgeI	GGCGCC	2 cut(s)	450, 1060
EheI	GGCGCC	2 cut(s)	450, 1060
ErhI	CCWWGG	3 cut(s)	862, 1128, 1165
FaqI	GGGAC	1 cut(s)	1194
FauI	CCCGC	3 cut(s)	288, 400, 1112
FbaI	TGATCA	2 cut(s)	3, 697
FblI	GTMKAC	1 cut(s)	1136
FokI	GGATG	4 cut(s)	190, 236, 844, 1143
FriOI	GRGCYC	2 cut(s)	431, 791
FspBI	CTAG	8 cut(s)	276, 302, 729, 780, 801, 852, 1115, 1203
FspI	TGCGCA	1 cut(s)	271
GlaI	GCGC	6 cut(s)	271, 450, 552, 557, 1060, 1092
GsuI	CTGGAG	2 cut(s)	326, 981
HaeII	RGCGCY	3 cut(s)	452, 1062, 1094
HaeIII	GGCC	9 cut(s)	37, 243, 350, 757, 789, 952, 975, 1020, 1108
HapII	CCGG	9 cut(s)	126, 147, 381, 432, 576, 758, 797, 818, 933
HhaI	GCGC	6 cut(s)	272, 451, 553, 558, 1061, 1093
Hin1I	GRCGYC	2 cut(s)	449, 1059
Hin6I	GCGC	6 cut(s)	270, 449, 551, 556, 1059, 1091
HinP1I	GCGC	6 cut(s)	270, 449, 551, 556, 1059, 1091
HinfI	GANTC	4 cut(s)	751, 793, 1051, 1133
HpaII	CCGG	9 cut(s)	126, 147, 381, 432, 576, 758, 797, 818, 933
HphI	GGTGA	2 cut(s)	394, 707
Hpy166II	GTNNAC	3 cut(s)	232, 909, 1137
Hpy188I	TCNGA	5 cut(s)	133, 316, 509, 598, 918
Hpy188III	TCNNGA	4 cut(s)	89, 424, 719, 878
Hpy8I	GTNNAC	3 cut(s)	232, 909, 1137
Hpy99I	CGWCG	5 cut(s)	320, 457, 616, 619, 826
HpyAV	CCTTC	2 cut(s)	366, 555
HpyCH4III	ACNGT	1 cut(s)	115
HpyCH4IV	ACGT	2 cut(s)	266, 824
HpyCH4V	TGCA	4 cut(s)	33, 104, 581, 668
HpyF10VI	GCNNNNNNNGC	9 cut(s)	252, 269, 343, 754, 933, 972, 1090, 1097, 1159
HpyF3I	CTNAG	3 cut(s)	130, 422, 597
HpySE526I	ACGT	2 cut(s)	266, 824
Hsp92I	GRCGYC	2 cut(s)	449, 1059
HspAI	GCGC	6 cut(s)	270, 449, 551, 556, 1059, 1091
KasI	GGCGCC	2 cut(s)	448, 1058
KroI	GCCGGC	1 cut(s)	932
KroNI	GCCGGC	1 cut(s)	934
Ksp22I	TGATCA	2 cut(s)	3, 697
Kzo9I	GATC	6 cut(s)	3, 24, 85, 697, 1037, 1186
LmnI	GCTCC	7 cut(s)	298, 342, 426, 434, 509, 760, 1169
Lsp1109I	GCAGC	9 cut(s)	17, 85, 88, 284, 502, 524, 565, 978, 1162
LweI	GCATC	2 cut(s)	258, 1162
MaeI	CTAG	8 cut(s)	276, 302, 729, 780, 801, 852, 1115, 1203
MaeII	ACGT	2 cut(s)	266, 824
MaeIII	GTNAC	3 cut(s)	176, 535, 712
MalI	GATC	6 cut(s)	5, 26, 87, 699, 1039, 1188
MbiI	CCGCTC	1 cut(s)	1172
MboI	GATC	6 cut(s)	3, 24, 85, 697, 1037, 1186
MboII	GAAGA	1 cut(s)	208
MfeI	CAATTG	2 cut(s)	921, 1025
MflI	RGATCY	1 cut(s)	24
MhlI	GDGCHC	4 cut(s)	309, 431, 791, 885
MlsI	TGGCCA	1 cut(s)	1020
MluNI	TGGCCA	1 cut(s)	1020
Mly113I	GGCGCC	2 cut(s)	449, 1059
MlyI	GAGTC	2 cut(s)	1060, 1142
MmeI	TCCRAC	4 cut(s)	339, 522, 654, 941
Mox20I	TGGCCA	1 cut(s)	1020
MroNI	GCCGGC	1 cut(s)	932
MroXI	GAANNNNTTC	1 cut(s)	148
MscI	TGGCCA	1 cut(s)	1020
MseI	TTAA	3 cut(s)	411, 587, 897
MslI	CAYNNNNRTG	3 cut(s)	227, 254, 1077
Msp20I	TGGCCA	1 cut(s)	1020
MspA1I	CMGCKG	4 cut(s)	30, 98, 515, 1064
MspI	CCGG	9 cut(s)	126, 147, 381, 432, 576, 758, 797, 818, 933
MspR9I	CCNGG	4 cut(s)	126, 433, 576, 1017
MteI	GCGCNGCGC	1 cut(s)	554
MunI	CAATTG	2 cut(s)	921, 1025
MvaI	CCWGG	1 cut(s)	1017
MvnI	CGCG	3 cut(s)	295, 551, 558
MwoI	GCNNNNNNNGC	9 cut(s)	252, 269, 343, 754, 933, 972, 1090, 1097, 1159
NaeI	GCCGGC	1 cut(s)	934
NarI	GGCGCC	2 cut(s)	449, 1059
NciI	CCSGG	3 cut(s)	126, 433, 576
NcoI	CCATGG	2 cut(s)	1128, 1165
NdeII	GATC	6 cut(s)	3, 24, 85, 697, 1037, 1186
NgoMIV	GCCGGC	1 cut(s)	932
NsbI	TGCGCA	1 cut(s)	271
NspI	RCATGY	3 cut(s)	108, 259, 445
OliI	CACNNNNGTG	2 cut(s)	227, 1077
PaeI	GCATGC	2 cut(s)	108, 259
PdiI	GCCGGC	1 cut(s)	934
PdmI	GAANNNNTTC	1 cut(s)	148
PfeI	GAWTC	2 cut(s)	751, 793
PflMI	CCANNNNNTGG	3 cut(s)	333, 959, 1027
PinAI	ACCGGT	1 cut(s)	146
PleI	GAGTC	2 cut(s)	1059, 1141
PluTI	GGCGCC	2 cut(s)	452, 1062
PmaCI	CACGTG	1 cut(s)	267
PmlI	CACGTG	1 cut(s)	267
PpsI	GAGTC	2 cut(s)	1059, 1141
Ppu21I	YACGTR	1 cut(s)	267
PshBI	ATTAAT	1 cut(s)	897
Psp124BI	GAGCTC	1 cut(s)	431
Psp6I	CCWGG	1 cut(s)	1015
PspCI	CACGTG	1 cut(s)	267
PspGI	CCWGG	1 cut(s)	1015
PspOMI	GGGCCC	1 cut(s)	787
PspPI	GGNCC	6 cut(s)	36, 241, 435, 787, 788, 950
PstI	CTGCAG	1 cut(s)	35
PstNI	CAGNNNCTG	2 cut(s)	101, 959
PsuI	RGATCY	1 cut(s)	24
PvuII	CAGCTG	2 cut(s)	98, 515
RsaI	GTAC	2 cut(s)	784, 1045
RsaNI	GTAC	2 cut(s)	783, 1044
RseI	CAYNNNNRTG	3 cut(s)	227, 254, 1077
SacI	GAGCTC	1 cut(s)	431
SaqAI	TTAA	3 cut(s)	411, 587, 897
Sau3AI	GATC	6 cut(s)	3, 24, 85, 697, 1037, 1186
Sau96I	GGNCC	6 cut(s)	36, 241, 435, 787, 788, 950
SchI	GAGTC	2 cut(s)	1060, 1142
ScrFI	CCNGG	4 cut(s)	126, 433, 576, 1017
SduI	GDGCHC	4 cut(s)	309, 431, 791, 885
SfaNI	GCATC	2 cut(s)	258, 1162
SfcI	CTRYAG	1 cut(s)	31
SfoI	GGCGCC	2 cut(s)	450, 1060
SinI	GGWCC	1 cut(s)	435
SmiMI	CAYNNNNRTG	3 cut(s)	227, 254, 1077
SmlI	CTYRAG	1 cut(s)	463
SmoI	CTYRAG	1 cut(s)	463
SphI	GCATGC	2 cut(s)	108, 259
SspDI	GGCGCC	2 cut(s)	448, 1058
SspMI	CTAG	8 cut(s)	276, 302, 729, 780, 801, 852, 1115, 1203
SstI	GAGCTC	1 cut(s)	431
StyD4I	CCNGG	4 cut(s)	124, 431, 574, 1015
StyI	CCWWGG	3 cut(s)	862, 1128, 1165
TaaI	ACNGT	1 cut(s)	115
TaiI	ACGT	2 cut(s)	269, 827
TaqI	TCGA	5 cut(s)	60, 78, 330, 617, 720
TatI	WGTACW	1 cut(s)	1043
TauI	GCSGC	5 cut(s)	246, 249, 371, 1064, 1091
TfiI	GAWTC	2 cut(s)	751, 793
Tru1I	TTAA	3 cut(s)	411, 587, 897
Tru9I	TTAA	3 cut(s)	411, 587, 897
TscAI	CASTG	2 cut(s)	379, 960
TseI	GCWGC	9 cut(s)	30, 98, 101, 272, 512, 515, 553, 966, 1150
TspDTI	ATGAA	3 cut(s)	46, 863, 1001
TspGWI	ACGGA	2 cut(s)	554, 600
TspRI	CASTG	2 cut(s)	379, 960
Van91I	CCANNNNNTGG	3 cut(s)	333, 959, 1027
VpaK11BI	GGWCC	1 cut(s)	435
VspI	ATTAAT	1 cut(s)	897
XagI	CCTNNNNNAGG	2 cut(s)	344, 1113
XapI	RAATTY	3 cut(s)	601, 628, 988
XceI	RCATGY	3 cut(s)	108, 259, 445
XcmI	CCANNNNNNNNNTGG	1 cut(s)	529
XmiI	GTMKAC	1 cut(s)	1136
XmnI	GAANNNNTTC	1 cut(s)	148
XspI	CTAG	8 cut(s)	276, 302, 729, 780, 801, 852, 1115, 1203

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.