Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0003641

Physical Location & Seq

Genomic Coordinates Forward (+)

4157990 .. 4159180

Gene Structure 1191 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom16g06480.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1191 bp

ATGGGATCCGCTGCAGGCCCAATTTTCCACTACAATTCATCGACAAAACCAACCAAGTCGATGATCGATCCAGAACCAGTTGCAGCATGCTCTACTGTCGCCGACCCCGGCTCAGACCCCAACCGAACCGGTTCGTCTATCCAAGAACAACAACCCAGTAACAAGAAGCCTCCTGCGAAGAGGACATCCGCCAAAGACAGGCACACCAAAGTGGACGGGAGGGGCCGCCGCATCCGCATGCCTGCCACATGCGCAGCTAGGGTTTTCCAGCTCACGCGGGAGCTAGGGCACAAGTCCGACGGCGAGACCATCGAGTGGCTCCTCCAGCAGGCCGAACCTTCTGTCATCGCCGCCACTGGAACCGGCACCATTCCCGCCAACTTCACCTCCCTCAACATCTCGCTCAGGAGCTCCGGGTCCAGCATGTCGGCGCCGTCGCACTACTTGAGGACTAACGCAAGTAATTATTACTTCAACTCCAACAACTTCGGAGCAGCTGCCTCCACCTCTCAGTTGGTTACGGAGGAGAACGCGCAGCGTGGAAGGATTTTGTTTCCCGGTGCAGGGTTAATGTCGTCTGAGAATTCTCCTCCGTCGTCGATGTTGTGGAATTTCAATCATTCTGGCAATAATAATGTGAGTAATAATACAATGTTGGAAGCCAAGCAAGAGTTGGGTGATCATCATCAGGCTGTTACTCTAGATGAGGCTAGTAGCATGGCAAGAAAGCGGATTCGGCCGGAGCAAGATTTGTTATCTGCGAGTACGGGCCCGATTCCGGCTAGTCAAAATACAACTCCGGCGACGTTTTGGATGGTGGCAAATAATAACCTTAGTAATAGCCAAGGGAGTATTCATCACGAGCACACTAATTCCATTAATCCCATGTGGACAATTCCGACAATTGGCAACGCCGGCAATATGTATAGGGGGCCAGTGGCTGGAGGCAGCCACGGCCTACATTTTATGAATTTCGCTTCTCCAATGGCTATATTGCCTGGCCAACAATTGGGTTTGGGATCAAGTACAACGAGTCATGGCGCCGCTGACAGCCACTTGGGTGTGCTGGCGGCGCTCAACGCATATCGGCCTATTCTTGGCGGGGTAGCCATGGAGTCTACTGCGAACGGGCAGCATCATCCGCACCATGGAGCGGACGAGGGACATGATCGTAATACCAATGCTAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003700 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006355 GO:0006725 GO:0006807 GO:0007049 GO:0007275 GO:0007623 GO:0008150 GO:0008152 GO:0008283 GO:0009058 GO:0009059 GO:0009719 GO:0009725 GO:0009735 GO:0009791 GO:0009889 GO:0009908 GO:0009962 GO:0009987 GO:0010033 GO:0010229 GO:0010252 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022402 GO:0022414 GO:0031323 GO:0031326 GO:0031537 GO:0031540 GO:0032501 GO:0032502 GO:0034641 GO:0034645 GO:0042023 GO:0042221 GO:0042592 GO:0043170 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044786 GO:0046483 GO:0048367 GO:0048438 GO:0048467 GO:0048511 GO:0048608 GO:0048731 GO:0048856 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0065008 GO:0071704 GO:0080090 GO:0090304 GO:0090567 GO:0140110 GO:1901360 GO:1901576 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TCP

Protein Analysis

397

Amino Acids

42.1

Weight (kDa)

8.55

Isoelectric Point (pI)

45.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TCP	PF03634	63 - 248	9.4e-35	TCP family transcription factor

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003641)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G69690
fragaria_vesca	FvH4_4g31520 FvH4_5g15150
malus_domestica	MD06G1191800.v1.1 MD13G1073500.v1.1 MD14G1198200.v1.1 MD16G1074800.v1.1
prunus_persica	Prupe.1G272500_v2.0.a1 Prupe.5G191200_v2.0.a1
pyrus_communis	pycom06g16990 pycom13g06580 pycom14g16460 pycom16g06480
rosa_chinensis	RchiOBHm_Chr4g0440011 RchiOBHm_Chr7g0181021
rosa_laevigata	RLG00000005218 RLG00000006215
rosa_multiflora	Rmu_sc0006000.1_g000009 Rmu_sc0007079.1_g000001
rosa_roxburghii	Rroxscaffold_3G00272330 Rroxscaffold_5G00380970
rosa_rugosa	Rorug04G0323300 Rorug06G0438600
rosa_samantha	Rh4AG295500 Rh4AG374300 Rh4BG301900 Rh4BG386600 Rh4CG401100 Rh4DG380900 Rh7AG039800 Rh7BG039200 Rh7CG041000 Rh7DG039400
rosa_wichuraiana	Rw4G032020 Rw7G003280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	253
AccB1I	GGYRCC	3 cut(s)	365, 430, 1040
AccB7I	CCANNNNNTGG	3 cut(s)	315, 941, 1009
AccBSI	CCGCTC	1 cut(s)	1154
AccI	GTMKAC	1 cut(s)	1118
AccII	CGCG	2 cut(s)	277, 533
AclWI	GGATC	3 cut(s)	13, 62, 1027
AcoI	YGGCCR	2 cut(s)	737, 1000
AcsI	RAATTY	3 cut(s)	583, 610, 970
AcyI	GRCGYC	2 cut(s)	431, 1041
AfaI	GTAC	2 cut(s)	766, 1027
AgeI	ACCGGT	1 cut(s)	128
AgsI	TTSAA	2 cut(s)	475, 616
AjnI	CCWGG	1 cut(s)	997
AjuI	GAANNNNNNNTTGG	2 cut(s)	837, 869
AleI	CACNNNNGTG	2 cut(s)	209, 1059
AluBI	AGCT	5 cut(s)	257, 271, 283, 411, 497
AluI	AGCT	5 cut(s)	257, 271, 283, 411, 497
Alw21I	GWGCWC	2 cut(s)	413, 867
Alw26I	GTCTC	1 cut(s)	299
AlwI	GGATC	3 cut(s)	13, 62, 1027
AlwNI	CAGNNNCTG	1 cut(s)	941
AoxI	GGCC	9 cut(s)	16, 223, 330, 737, 769, 932, 955, 1000, 1088
ApaI	GGGCCC	1 cut(s)	773
ApeKI	GCWGC	8 cut(s)	11, 83, 254, 494, 497, 535, 948, 1132
ApoI	RAATTY	3 cut(s)	583, 610, 970
ArsI	GACNNNNNNTTYG	2 cut(s)	327, 359
AseI	ATTAAT	1 cut(s)	879
AsiGI	ACCGGT	1 cut(s)	128
Asp700I	GAANNNNTTC	1 cut(s)	130
AspLEI	GCGC	5 cut(s)	254, 433, 535, 1043, 1075
AspS9I	GGNCC	6 cut(s)	17, 223, 417, 769, 770, 932
AsuC2I	CCSGG	3 cut(s)	108, 415, 558
AsuHPI	GGTGA	2 cut(s)	376, 689
AvaII	GGWCC	1 cut(s)	417
BaeGI	GKGCMC	2 cut(s)	291, 773
BalI	TGGCCA	1 cut(s)	1002
BamHI	GGATCC	1 cut(s)	5
BanI	GGYRCC	3 cut(s)	365, 430, 1040
BanII	GRGCYC	2 cut(s)	413, 773
BauI	CACGAG	1 cut(s)	860
Bbv12I	GWGCWC	2 cut(s)	413, 867
BbvI	GCAGC	7 cut(s)	95, 266, 484, 506, 547, 960, 1144
BccI	CCATC	2 cut(s)	317, 808
BceAI	ACGGC	3 cut(s)	316, 418, 970
BciT130I	CCWGG	1 cut(s)	999
BclI	TGATCA	1 cut(s)	679
BcnI	CCSGG	3 cut(s)	108, 415, 558
BcoDI	GTCTC	1 cut(s)	299
BfaI	CTAG	6 cut(s)	258, 284, 701, 711, 783, 1185
BfmI	CTRYAG	1 cut(s)	12
BfoI	RGCGCY	3 cut(s)	434, 1044, 1076
Bme1390I	CCNGG	4 cut(s)	108, 415, 558, 999
Bme18I	GGWCC	1 cut(s)	417
BmgT120I	GGNCC	6 cut(s)	17, 223, 417, 769, 770, 932
BmrFI	CCNGG	4 cut(s)	108, 415, 558, 999
BmrI	ACTGGG	1 cut(s)	150
BmsI	GCATC	2 cut(s)	240, 1144
BmuI	ACTGGG	1 cut(s)	150
BpmI	CTGGAG	2 cut(s)	308, 963
Bpu10I	CCTNAGC	1 cut(s)	404
BpuEI	CTTGAG	1 cut(s)	466
BpuMI	CCSGG	3 cut(s)	108, 415, 558
Bsa29I	ATCGAT	1 cut(s)	66
BsaBI	GATNNNNATC	1 cut(s)	684
BsaHI	GRCGYC	2 cut(s)	431, 1041
BsaI	GGTCTC	1 cut(s)	299
BsaJI	CCNNGG	5 cut(s)	106, 844, 952, 1110, 1147
BsaWI	WCCGGW	1 cut(s)	128
BsaXI	ACNNNNNCTCC	4 cut(s)	371, 401, 461, 491
Bse118I	RCCGGY	3 cut(s)	128, 362, 914
Bse1I	ACTGG	4 cut(s)	77, 156, 361, 935
Bse8I	GATNNNNATC	1 cut(s)	684
BseBI	CCWGG	1 cut(s)	999
BseCI	ATCGAT	1 cut(s)	66
BseDI	CCNNGG	5 cut(s)	106, 844, 952, 1110, 1147
BseGI	GGATG	4 cut(s)	185, 231, 819, 1138
BseJI	GATNNNNATC	1 cut(s)	684
BseMII	CTCAG	4 cut(s)	126, 418, 524, 570
BseNI	ACTGG	4 cut(s)	77, 156, 361, 935
BseRI	GAGGAG	3 cut(s)	311, 539, 579
BseSI	GKGCMC	2 cut(s)	291, 773
BseX3I	CGGCCG	1 cut(s)	737
BseXI	GCAGC	7 cut(s)	95, 266, 484, 506, 547, 960, 1144
BsgI	GTGCAG	1 cut(s)	582
Bsh1236I	CGCG	2 cut(s)	277, 533
Bsh1285I	CGRYCG	1 cut(s)	740
BshFI	GGCC	9 cut(s)	18, 225, 332, 739, 771, 934, 957, 1002, 1090
BshNI	GGYRCC	3 cut(s)	365, 430, 1040
BshTI	ACCGGT	1 cut(s)	128
BshVI	ATCGAT	1 cut(s)	66
BsiEI	CGRYCG	1 cut(s)	740
BsiHKAI	GWGCWC	2 cut(s)	413, 867
BsiSI	CCGG	9 cut(s)	108, 129, 363, 414, 558, 740, 779, 800, 915
BslFI	GGGAC	1 cut(s)	1176
BsmAI	GTCTC	1 cut(s)	299
BsmFI	GGGAC	1 cut(s)	1176
BsnI	GGCC	9 cut(s)	18, 225, 332, 739, 771, 934, 957, 1002, 1090
Bso31I	GGTCTC	1 cut(s)	299
Bsp120I	GGGCCC	1 cut(s)	769
Bsp1286I	GDGCHC	4 cut(s)	291, 413, 773, 867
Bsp143I	GATC	6 cut(s)	5, 63, 67, 679, 1019, 1168
Bsp19I	CCATGG	2 cut(s)	1110, 1147
BspANI	GGCC	9 cut(s)	18, 225, 332, 739, 771, 934, 957, 1002, 1090
BspCNI	CTCAG	4 cut(s)	125, 417, 523, 571
BspDI	ATCGAT	1 cut(s)	66
BspFNI	CGCG	2 cut(s)	277, 533
BspMAI	CTGCAG	1 cut(s)	16
BspPI	GGATC	3 cut(s)	13, 62, 1027
BspT107I	GGYRCC	3 cut(s)	365, 430, 1040
BspTNI	GGTCTC	1 cut(s)	299
BsrBI	CCGCTC	1 cut(s)	1154
BsrFI	RCCGGY	3 cut(s)	128, 362, 914
BsrI	ACTGG	4 cut(s)	77, 156, 361, 935
BssAI	RCCGGY	3 cut(s)	128, 362, 914
BssECI	CCNNGG	5 cut(s)	106, 844, 952, 1110, 1147
BssMI	GATC	6 cut(s)	5, 63, 67, 679, 1019, 1168
BssNI	GRCGYC	2 cut(s)	431, 1041
BssSI	CACGAG	1 cut(s)	860
BssT1I	CCWWGG	3 cut(s)	844, 1110, 1147
Bst2BI	CACGAG	1 cut(s)	860
Bst2UI	CCWGG	1 cut(s)	999
Bst4CI	ACNGT	1 cut(s)	97
Bst6I	CTCTTC	1 cut(s)	173
BstACI	GRCGYC	2 cut(s)	431, 1041
BstC8I	GCNNGC	7 cut(s)	16, 88, 239, 243, 330, 916, 1068
BstDEI	CTNAG	5 cut(s)	112, 404, 510, 579, 833
BstDSI	CCRYGG	3 cut(s)	952, 1110, 1147
BstENI	CCTNNNNNAGG	1 cut(s)	326
BstF5I	GGATG	4 cut(s)	185, 231, 819, 1138
BstFNI	CGCG	2 cut(s)	277, 533
BstH2I	RGCGCY	3 cut(s)	434, 1044, 1076
BstHHI	GCGC	5 cut(s)	254, 433, 535, 1043, 1075
BstKTI	GATC	6 cut(s)	8, 66, 70, 682, 1022, 1171
BstMAI	GTCTC	1 cut(s)	299
BstMBI	GATC	6 cut(s)	5, 63, 67, 679, 1019, 1168
BstMCI	CGRYCG	1 cut(s)	740
BstMWI	GCNNNNNNNGC	9 cut(s)	234, 251, 325, 736, 915, 954, 1072, 1079, 1141
BstNI	CCWGG	1 cut(s)	999
BstNSI	RCATGY	4 cut(s)	90, 241, 252, 427
BstSCI	CCNGG	4 cut(s)	106, 413, 556, 997
BstSFI	CTRYAG	1 cut(s)	12
BstSLI	GKGCMC	2 cut(s)	291, 773
BstUI	CGCG	2 cut(s)	277, 533
BstV1I	GCAGC	7 cut(s)	95, 266, 484, 506, 547, 960, 1144
BstX2I	RGATCY	1 cut(s)	5
BstYI	RGATCY	1 cut(s)	5
BstZI	CGGCCG	1 cut(s)	737
Bsu15I	ATCGAT	1 cut(s)	66
BsuRI	GGCC	9 cut(s)	18, 225, 332, 739, 771, 934, 957, 1002, 1090
BsuTUI	ATCGAT	1 cut(s)	66
BtgI	CCRYGG	3 cut(s)	952, 1110, 1147
BtgZI	GCGATG	1 cut(s)	331
BtsCI	GGATG	4 cut(s)	185, 231, 819, 1138
BtsIMutI	CAGTG	2 cut(s)	354, 942
Cac8I	GCNNGC	7 cut(s)	16, 88, 239, 243, 330, 916, 1068
CaiI	CAGNNNCTG	1 cut(s)	941
CfoI	GCGC	5 cut(s)	254, 433, 535, 1043, 1075
Cfr10I	RCCGGY	3 cut(s)	128, 362, 914
Cfr13I	GGNCC	6 cut(s)	17, 223, 417, 769, 770, 932
ClaI	ATCGAT	1 cut(s)	66
Csp6I	GTAC	2 cut(s)	765, 1026
CspAI	ACCGGT	1 cut(s)	128
CviQI	GTAC	2 cut(s)	765, 1026
DdeI	CTNAG	5 cut(s)	112, 404, 510, 579, 833
DinI	GGCGCC	2 cut(s)	432, 1042
DpnI	GATC	6 cut(s)	7, 65, 69, 681, 1021, 1170
DpnII	GATC	6 cut(s)	5, 63, 67, 679, 1019, 1168
EaeI	YGGCCR	2 cut(s)	737, 1000
EagI	CGGCCG	1 cut(s)	737
Eam1104I	CTCTTC	1 cut(s)	173
EarI	CTCTTC	1 cut(s)	173
EciI	GGCGGA	1 cut(s)	178
Ecl136II	GAGCTC	1 cut(s)	411
EclXI	CGGCCG	1 cut(s)	737
Eco130I	CCWWGG	3 cut(s)	844, 1110, 1147
Eco24I	GRGCYC	2 cut(s)	413, 773
Eco31I	GGTCTC	1 cut(s)	299
Eco47I	GGWCC	1 cut(s)	417
Eco52I	CGGCCG	1 cut(s)	737
Eco53kI	GAGCTC	1 cut(s)	411
EcoICRI	GAGCTC	1 cut(s)	411
EcoNI	CCTNNNNNAGG	1 cut(s)	326
EcoRI	GAATTC	1 cut(s)	583
EcoRII	CCWGG	1 cut(s)	997
EcoT14I	CCWWGG	3 cut(s)	844, 1110, 1147
EcoT38I	GRGCYC	2 cut(s)	413, 773
EgeI	GGCGCC	2 cut(s)	432, 1042
EheI	GGCGCC	2 cut(s)	432, 1042
ErhI	CCWWGG	3 cut(s)	844, 1110, 1147
FaqI	GGGAC	1 cut(s)	1176
FauI	CCCGC	3 cut(s)	270, 382, 1094
FbaI	TGATCA	1 cut(s)	679
FblI	GTMKAC	1 cut(s)	1118
FokI	GGATG	4 cut(s)	172, 218, 826, 1125
FriOI	GRGCYC	2 cut(s)	413, 773
FspBI	CTAG	6 cut(s)	258, 284, 701, 711, 783, 1185
FspI	TGCGCA	1 cut(s)	253
GlaI	GCGC	5 cut(s)	253, 432, 534, 1042, 1074
GsuI	CTGGAG	2 cut(s)	308, 963
HaeII	RGCGCY	3 cut(s)	434, 1044, 1076
HaeIII	GGCC	9 cut(s)	18, 225, 332, 739, 771, 934, 957, 1002, 1090
HapII	CCGG	9 cut(s)	108, 129, 363, 414, 558, 740, 779, 800, 915
HhaI	GCGC	5 cut(s)	254, 433, 535, 1043, 1075
Hin1I	GRCGYC	2 cut(s)	431, 1041
Hin6I	GCGC	5 cut(s)	252, 431, 533, 1041, 1073
HinP1I	GCGC	5 cut(s)	252, 431, 533, 1041, 1073
HinfI	GANTC	4 cut(s)	733, 775, 1033, 1115
HpaII	CCGG	9 cut(s)	108, 129, 363, 414, 558, 740, 779, 800, 915
HphI	GGTGA	2 cut(s)	376, 689
Hpy166II	GTNNAC	3 cut(s)	214, 891, 1119
Hpy188I	TCNGA	5 cut(s)	115, 298, 491, 580, 900
Hpy188III	TCNNGA	4 cut(s)	71, 406, 701, 860
Hpy8I	GTNNAC	3 cut(s)	214, 891, 1119
Hpy99I	CGWCG	5 cut(s)	302, 439, 598, 601, 808
HpyAV	CCTTC	2 cut(s)	348, 537
HpyCH4III	ACNGT	1 cut(s)	97
HpyCH4IV	ACGT	1 cut(s)	806
HpyCH4V	TGCA	3 cut(s)	14, 83, 563
HpyF10VI	GCNNNNNNNGC	9 cut(s)	234, 251, 325, 736, 915, 954, 1072, 1079, 1141
HpyF3I	CTNAG	5 cut(s)	112, 404, 510, 579, 833
HpySE526I	ACGT	1 cut(s)	806
Hsp92I	GRCGYC	2 cut(s)	431, 1041
HspAI	GCGC	5 cut(s)	252, 431, 533, 1041, 1073
KasI	GGCGCC	2 cut(s)	430, 1040
KroI	GCCGGC	1 cut(s)	914
KroNI	GCCGGC	1 cut(s)	916
Ksp22I	TGATCA	1 cut(s)	679
Kzo9I	GATC	6 cut(s)	5, 63, 67, 679, 1019, 1168
LmnI	GCTCC	7 cut(s)	280, 324, 408, 416, 491, 742, 1151
Lsp1109I	GCAGC	7 cut(s)	95, 266, 484, 506, 547, 960, 1144
LweI	GCATC	2 cut(s)	240, 1144
MaeI	CTAG	6 cut(s)	258, 284, 701, 711, 783, 1185
MaeII	ACGT	1 cut(s)	806
MaeIII	GTNAC	3 cut(s)	158, 517, 694
MalI	GATC	6 cut(s)	7, 65, 69, 681, 1021, 1170
MbiI	CCGCTC	1 cut(s)	1154
MboI	GATC	6 cut(s)	5, 63, 67, 679, 1019, 1168
MboII	GAAGA	1 cut(s)	190
MfeI	CAATTG	2 cut(s)	903, 1007
MflI	RGATCY	1 cut(s)	5
MhlI	GDGCHC	4 cut(s)	291, 413, 773, 867
MlsI	TGGCCA	1 cut(s)	1002
MluNI	TGGCCA	1 cut(s)	1002
Mly113I	GGCGCC	2 cut(s)	431, 1041
MlyI	GAGTC	2 cut(s)	1042, 1124
MmeI	TCCRAC	4 cut(s)	321, 504, 636, 923
Mox20I	TGGCCA	1 cut(s)	1002
MroNI	GCCGGC	1 cut(s)	914
MroXI	GAANNNNTTC	1 cut(s)	130
MscI	TGGCCA	1 cut(s)	1002
MseI	TTAA	2 cut(s)	569, 879
MslI	CAYNNNNRTG	3 cut(s)	209, 236, 1059
Msp20I	TGGCCA	1 cut(s)	1002
MspA1I	CMGCKG	3 cut(s)	11, 497, 1046
MspI	CCGG	9 cut(s)	108, 129, 363, 414, 558, 740, 779, 800, 915
MspR9I	CCNGG	4 cut(s)	108, 415, 558, 999
MunI	CAATTG	2 cut(s)	903, 1007
MvaI	CCWGG	1 cut(s)	999
MvnI	CGCG	2 cut(s)	277, 533
MwoI	GCNNNNNNNGC	9 cut(s)	234, 251, 325, 736, 915, 954, 1072, 1079, 1141
NaeI	GCCGGC	1 cut(s)	916
NarI	GGCGCC	2 cut(s)	431, 1041
NciI	CCSGG	3 cut(s)	108, 415, 558
NcoI	CCATGG	2 cut(s)	1110, 1147
NdeII	GATC	6 cut(s)	5, 63, 67, 679, 1019, 1168
NgoMIV	GCCGGC	1 cut(s)	914
NsbI	TGCGCA	1 cut(s)	253
NspI	RCATGY	4 cut(s)	90, 241, 252, 427
OliI	CACNNNNGTG	2 cut(s)	209, 1059
PaeI	GCATGC	2 cut(s)	90, 241
PdiI	GCCGGC	1 cut(s)	916
PdmI	GAANNNNTTC	1 cut(s)	130
PfeI	GAWTC	2 cut(s)	733, 775
PflMI	CCANNNNNTGG	3 cut(s)	315, 941, 1009
PinAI	ACCGGT	1 cut(s)	128
PleI	GAGTC	2 cut(s)	1041, 1123
PluTI	GGCGCC	2 cut(s)	434, 1044
PpsI	GAGTC	2 cut(s)	1041, 1123
PshBI	ATTAAT	1 cut(s)	879
Psp124BI	GAGCTC	1 cut(s)	413
Psp6I	CCWGG	1 cut(s)	997
PspGI	CCWGG	1 cut(s)	997
PspOMI	GGGCCC	1 cut(s)	769
PspPI	GGNCC	6 cut(s)	17, 223, 417, 769, 770, 932
PstI	CTGCAG	1 cut(s)	16
PstNI	CAGNNNCTG	1 cut(s)	941
PsuI	RGATCY	1 cut(s)	5
PvuII	CAGCTG	1 cut(s)	497
RsaI	GTAC	2 cut(s)	766, 1027
RsaNI	GTAC	2 cut(s)	765, 1026
RseI	CAYNNNNRTG	3 cut(s)	209, 236, 1059
SacI	GAGCTC	1 cut(s)	413
SaqAI	TTAA	2 cut(s)	569, 879
Sau3AI	GATC	6 cut(s)	5, 63, 67, 679, 1019, 1168
Sau96I	GGNCC	6 cut(s)	17, 223, 417, 769, 770, 932
SchI	GAGTC	2 cut(s)	1042, 1124
ScrFI	CCNGG	4 cut(s)	108, 415, 558, 999
SduI	GDGCHC	4 cut(s)	291, 413, 773, 867
SfaNI	GCATC	2 cut(s)	240, 1144
SfcI	CTRYAG	1 cut(s)	12
SfoI	GGCGCC	2 cut(s)	432, 1042
SinI	GGWCC	1 cut(s)	417
SmiMI	CAYNNNNRTG	3 cut(s)	209, 236, 1059
SmlI	CTYRAG	1 cut(s)	445
SmoI	CTYRAG	1 cut(s)	445
SphI	GCATGC	2 cut(s)	90, 241
SspDI	GGCGCC	2 cut(s)	430, 1040
SspMI	CTAG	6 cut(s)	258, 284, 701, 711, 783, 1185
SstI	GAGCTC	1 cut(s)	413
StyD4I	CCNGG	4 cut(s)	106, 413, 556, 997
StyI	CCWWGG	3 cut(s)	844, 1110, 1147
TaaI	ACNGT	1 cut(s)	97
TaiI	ACGT	1 cut(s)	809
TaqI	TCGA	5 cut(s)	41, 59, 66, 312, 599
TatI	WGTACW	1 cut(s)	1025
TauI	GCSGC	5 cut(s)	228, 231, 353, 1046, 1073
TfiI	GAWTC	2 cut(s)	733, 775
Tru1I	TTAA	2 cut(s)	569, 879
Tru9I	TTAA	2 cut(s)	569, 879
TscAI	CASTG	2 cut(s)	361, 942
TseI	GCWGC	8 cut(s)	11, 83, 254, 494, 497, 535, 948, 1132
TspDTI	ATGAA	3 cut(s)	27, 845, 983
TspGWI	ACGGA	2 cut(s)	536, 582
TspRI	CASTG	2 cut(s)	361, 942
Van91I	CCANNNNNTGG	3 cut(s)	315, 941, 1009
VpaK11BI	GGWCC	1 cut(s)	417
VspI	ATTAAT	1 cut(s)	879
XagI	CCTNNNNNAGG	1 cut(s)	326
XapI	RAATTY	3 cut(s)	583, 610, 970
XbaI	TCTAGA	1 cut(s)	700
XceI	RCATGY	4 cut(s)	90, 241, 252, 427
XcmI	CCANNNNNNNNNTGG	2 cut(s)	511, 670
XmiI	GTMKAC	1 cut(s)	1118
XmnI	GAANNNNTTC	1 cut(s)	130
XspI	CTAG	6 cut(s)	258, 284, 701, 711, 783, 1185

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.