Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0003641

Physical Location & Seq

Genomic Coordinates Reverse (-)

2510663 .. 2512955

Gene Structure 2293 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG039200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1278 bp

ATGGAAGGCGGCGATGATCATTTCCACCACCACCACTACCAACAACAACAGCAGCAGCAGCATCACCACCGCCCCAACTTCCCATTCCAACTCCTCGATCAGAAGAAAGAAGACGAAGCCGCCTCCTGCTCCAACAACTCCGCCGCAGCCAGCGCTTATCCTTCTCTAGCTATCTCCTCCGCGGTAGATCCGATCAACCCAATAAACACCAACGCCACCGCATCGACAGCAGTCACCACCGCCGCCGTCGCAGCCGAGCCCTCCAAGAAGCCGCCGCCCAAGCGGACCTCCACTAAAGACCGCCACACCAAAGTCGACGGCCGCGGGCGCCGCATTCGAATGCCGGCGCTCTGCGCGGCCAGGGTGTTCCAGCTCACTCGCGAGCTGGGACACAAGTCCGACGGCGAAACGATCGAGTGGCTCCTCCAGCAGGCCGAACCGGCCGTGATCGCCGCCACCGGAACCGGCACGATCCCAGCTAACTTCACTTCTCTAAACATCTCGCTACGAAGCTCCGGTTCAAGCATGTCGGTGCCGTCGCAGCTCAGATCTTCTTATTACAGCCCCAATTTCTCGTCGTCCATACACCAGAGTAGTCAGAACCAGCGGCGGAATCTGTTTCAGGGTTTGGGGCTTTCCTCCTCGGACAGCTCGTCGACGCTGCTCAATTTCCAGACCAACACCATGCACTCTATGCTTCAGGCCAAGCAGGAACTACGTGATACGGTGTCGTTGGACTTATCCGAGGCGGCGTCAGCGGCGGAGGGAAGCATGGGAAGGAAGAGAAGGCCAGCCGAACAGGACTTGAATCAAATGGGAAGTGGGTATTTACTGCAGTCCAGCTCCGGAGCAATCCCGGCGAGCCACCACAGCCAGATTCCGGCGAATTTTTGGATGCTGGCTAATTCCAATAATCCAGCAGTGATGAGCGGAGACCCAATTTGGACATTTCCTTCGGTCAATAACAGTGGGTTGTACAGAGGCACCATGTCAGGCGGCTTGCATTTCATGAACTTCCCGACCCCGGTAGCGCTGATGCCAAGTCAGCAGCAGATGGGCGGCTCCGGCGGCGGTGGAGGCGGAGATAACGGCGGAAATGACGGTAGTGGTGGTGGAGATCATCACAACATGAGCGACGGGCAGCTGAACATGCTGGCCGGGCTCAACCCGTACCGGCACATGTCCTCGGAGTCACCGCAGCAGCAGGCCAGTGGGTCCCACTCGCATCACGGCGGCGGCGGCGACGACCGGCACGATAGTACTAGTCACCACTCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0008283 GO:0009719 GO:0009725 GO:0009735 GO:0009737 GO:0009739 GO:0009791 GO:0009889 GO:0010029 GO:0010033 GO:0010229 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0031347 GO:0032501 GO:0032502 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048367 GO:0048580 GO:0048583 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051239 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0080134 GO:0090567 GO:0097305 GO:0140110 GO:1900140 GO:1901700 GO:1903506 GO:2000026 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TCP

Protein Analysis

425

Amino Acids

45.33

Weight (kDa)

6.78

Isoelectric Point (pI)

64.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TCP	PF03634	96 - 231	8.6e-35	TCP family transcription factor

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003641)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G69690
fragaria_vesca	FvH4_4g31520 FvH4_5g15150
malus_domestica	MD06G1191800.v1.1 MD13G1073500.v1.1 MD14G1198200.v1.1 MD16G1074800.v1.1
prunus_persica	Prupe.1G272500_v2.0.a1 Prupe.5G191200_v2.0.a1
pyrus_communis	pycom06g16990 pycom13g06580 pycom14g16460 pycom16g06480
rosa_chinensis	RchiOBHm_Chr4g0440011 RchiOBHm_Chr7g0181021
rosa_laevigata	RLG00000005218 RLG00000006215
rosa_multiflora	Rmu_sc0006000.1_g000009 Rmu_sc0007079.1_g000001
rosa_roxburghii	Rroxscaffold_3G00272330 Rroxscaffold_5G00380970
rosa_rugosa	Rorug04G0323300 Rorug06G0438600
rosa_samantha	Rh4AG295500 Rh4AG374300 Rh4BG301900 Rh4BG386600 Rh4CG401100 Rh4DG380900 Rh7AG039800 Rh7BG039200 Rh7CG041000 Rh7DG039400
rosa_wichuraiana	Rw4G032020 Rw7G003280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	327, 532, 983
AccBSI	CCGCTC	1 cut(s)	930
AccI	GTMKAC	2 cut(s)	315, 656
AccII	CGCG	4 cut(s)	182, 324, 356, 381
AccIII	TCCGGA	1 cut(s)	845
AclWI	GGATC	2 cut(s)	182, 466
AcoI	YGGCCR	4 cut(s)	319, 357, 441, 1155
AcsI	RAATTY	1 cut(s)	886
AcuI	CTGAAG	1 cut(s)	683
AcyI	GRCGYC	2 cut(s)	328, 752
AfaI	GTAC	3 cut(s)	977, 1172, 1261
AfeI	AGCGCT	2 cut(s)	154, 1032
AfiI	CCNNNNNNNGG	3 cut(s)	430, 880, 1024
AflIII	ACRYGT	1 cut(s)	1179
AgsI	TTSAA	2 cut(s)	522, 808
AhdI	GACNNNNNGTC	1 cut(s)	652
AhlI	ACTAGT	1 cut(s)	1262
AjnI	CCWGG	1 cut(s)	359
AjuI	GAANNNNNNNTTGG	2 cut(s)	68, 100
AluBI	AGCT	9 cut(s)	170, 373, 385, 479, 513, 544, 651, 843, 1144
AluI	AGCT	9 cut(s)	170, 373, 385, 479, 513, 544, 651, 843, 1144
Alw26I	GTCTC	1 cut(s)	927
AlwI	GGATC	2 cut(s)	182, 466
Aor13HI	TCCGGA	1 cut(s)	845
Aor51HI	AGCGCT	2 cut(s)	154, 1032
AoxI	GGCC	8 cut(s)	319, 357, 432, 441, 702, 788, 1155, 1206
ApoI	RAATTY	1 cut(s)	886
ArsI	GACNNNNNNTTYG	2 cut(s)	937, 969
AspLEI	GCGC	5 cut(s)	155, 330, 349, 356, 1033
AspS9I	GGNCC	2 cut(s)	285, 1215
AsuC2I	CCSGG	3 cut(s)	857, 1025, 1159
AsuHPI	GGTGA	4 cut(s)	56, 226, 1185, 1259
AsuII	TTCGAA	1 cut(s)	337
AvaII	GGWCC	2 cut(s)	285, 1215
BanI	GGYRCC	3 cut(s)	327, 532, 983
BanII	GRGCYC	2 cut(s)	261, 1164
BbsI	GAAGAC	1 cut(s)	117
BccI	CCATC	1 cut(s)	1048
BceAI	ACGGC	7 cut(s)	230, 334, 418, 428, 520, 1105, 1246
BciT130I	CCWGG	1 cut(s)	361
BclI	TGATCA	1 cut(s)	16
BcnI	CCSGG	3 cut(s)	857, 1025, 1159
BcoDI	GTCTC	1 cut(s)	927
BcuI	ACTAGT	1 cut(s)	1262
BfaI	CTAG	2 cut(s)	167, 1263
BfmI	CTRYAG	1 cut(s)	833
BfoI	RGCGCY	4 cut(s)	156, 331, 350, 1034
BglI	GCCNNNNNGGC	1 cut(s)	440
BglII	AGATCT	1 cut(s)	548
BmcAI	AGTACT	1 cut(s)	1261
Bme1390I	CCNGG	4 cut(s)	361, 857, 1025, 1159
Bme18I	GGWCC	2 cut(s)	285, 1215
BmeRI	GACNNNNNGTC	1 cut(s)	652
BmgT120I	GGNCC	2 cut(s)	285, 1215
BmiI	GGNNCC	8 cut(s)	329, 422, 463, 534, 985, 1063, 1216, 1217
BmrFI	CCNGG	4 cut(s)	361, 857, 1025, 1159
BmsI	GCATC	5 cut(s)	70, 230, 885, 1026, 1234
BoxI	GACNNNNGTC	2 cut(s)	230, 394
BpiI	GAAGAC	1 cut(s)	117
BpmI	CTGGAG	1 cut(s)	410
Bpu14I	TTCGAA	1 cut(s)	337
BpuMI	CCSGG	3 cut(s)	857, 1025, 1159
BsaAI	YACGTR	1 cut(s)	719
BsaHI	GRCGYC	2 cut(s)	328, 752
BsaI	GGTCTC	1 cut(s)	927
BsaJI	CCNNGG	7 cut(s)	180, 322, 360, 642, 744, 1023, 1185
BsaWI	WCCGGW	3 cut(s)	458, 515, 845
Bsc4I	CCNNNNNNNGG	3 cut(s)	430, 880, 1024
Bse118I	RCCGGY	5 cut(s)	343, 439, 464, 1173, 1248
Bse1I	ACTGG	1 cut(s)	1209
BseAI	TCCGGA	1 cut(s)	845
BseBI	CCWGG	1 cut(s)	361
BseDI	CCNNGG	7 cut(s)	180, 322, 360, 642, 744, 1023, 1185
BseGI	GGATG	1 cut(s)	900
BseLI	CCNNNNNNNGG	3 cut(s)	430, 880, 1024
BseMII	CTCAG	1 cut(s)	559
BseNI	ACTGG	1 cut(s)	1209
BseRI	GAGGAG	4 cut(s)	83, 166, 413, 631
BseX3I	CGGCCG	2 cut(s)	319, 441
BseYI	CCCAGC	2 cut(s)	385, 475
Bsh1236I	CGCG	4 cut(s)	182, 324, 356, 381
Bsh1285I	CGRYCG	4 cut(s)	322, 414, 444, 1249
BshFI	GGCC	8 cut(s)	321, 359, 434, 443, 704, 790, 1157, 1208
BshNI	GGYRCC	3 cut(s)	327, 532, 983
BsiEI	CGRYCG	4 cut(s)	322, 414, 444, 1249
BslFI	GGGAC	2 cut(s)	402, 1201
BslI	CCNNNNNNNGG	3 cut(s)	430, 880, 1024
BsmAI	GTCTC	1 cut(s)	927
BsmFI	GGGAC	2 cut(s)	402, 1201
BsmI	GAATGC	2 cut(s)	333, 345
BsnI	GGCC	8 cut(s)	321, 359, 434, 443, 704, 790, 1157, 1208
Bso31I	GGTCTC	1 cut(s)	927
Bsp119I	TTCGAA	1 cut(s)	337
Bsp1286I	GDGCHC	2 cut(s)	261, 1164
Bsp13I	TCCGGA	1 cut(s)	845
Bsp1407I	TGTACA	1 cut(s)	975
Bsp143I	GATC	9 cut(s)	16, 97, 187, 192, 411, 447, 471, 548, 1117
Bsp68I	TCGCGA	1 cut(s)	381
BspANI	GGCC	8 cut(s)	321, 359, 434, 443, 704, 790, 1157, 1208
BspCNI	CTCAG	1 cut(s)	558
BspEI	TCCGGA	1 cut(s)	845
BspFNI	CGCG	4 cut(s)	182, 324, 356, 381
BspHI	TCATGA	1 cut(s)	1008
BspLI	GGNNCC	8 cut(s)	329, 422, 463, 534, 985, 1063, 1216, 1217
BspMAI	CTGCAG	1 cut(s)	837
BspPI	GGATC	2 cut(s)	182, 466
BspT104I	TTCGAA	1 cut(s)	337
BspT107I	GGYRCC	3 cut(s)	327, 532, 983
BspTNI	GGTCTC	1 cut(s)	927
BsrBI	CCGCTC	1 cut(s)	930
BsrFI	RCCGGY	5 cut(s)	343, 439, 464, 1173, 1248
BsrGI	TGTACA	1 cut(s)	975
BsrI	ACTGG	1 cut(s)	1209
BssAI	RCCGGY	5 cut(s)	343, 439, 464, 1173, 1248
BssECI	CCNNGG	7 cut(s)	180, 322, 360, 642, 744, 1023, 1185
BssMI	GATC	9 cut(s)	16, 97, 187, 192, 411, 447, 471, 548, 1117
BssNI	GRCGYC	2 cut(s)	328, 752
Bst2UI	CCWGG	1 cut(s)	361
Bst4CI	ACNGT	3 cut(s)	727, 968, 1103
Bst6I	CTCTTC	1 cut(s)	776
BstACI	GRCGYC	2 cut(s)	328, 752
BstAPI	GCANNNNNTGC	1 cut(s)	694
BstAUI	TGTACA	1 cut(s)	975
BstBAI	YACGTR	1 cut(s)	719
BstBI	TTCGAA	1 cut(s)	337
BstDEI	CTNAG	2 cut(s)	545, 1275
BstDSI	CCRYGG	2 cut(s)	180, 322
BstENI	CCTNNNNNAGG	1 cut(s)	428
BstF5I	GGATG	1 cut(s)	900
BstFNI	CGCG	4 cut(s)	182, 324, 356, 381
BstH2I	RGCGCY	4 cut(s)	156, 331, 350, 1034
BstHHI	GCGC	5 cut(s)	155, 330, 349, 356, 1033
BstKTI	GATC	9 cut(s)	19, 100, 190, 195, 414, 450, 474, 551, 1120
BstMAI	GTCTC	1 cut(s)	927
BstMBI	GATC	9 cut(s)	16, 97, 187, 192, 411, 447, 471, 548, 1117
BstMCI	CGRYCG	4 cut(s)	322, 414, 444, 1249
BstNI	CCWGG	1 cut(s)	361
BstNSI	RCATGY	3 cut(s)	529, 1153, 1183
BstPAI	GACNNNNGTC	2 cut(s)	230, 394
BstSCI	CCNGG	4 cut(s)	359, 855, 1023, 1157
BstSFI	CTRYAG	1 cut(s)	833
BstUI	CGCG	4 cut(s)	182, 324, 356, 381
BstV2I	GAAGAC	1 cut(s)	117
BstX2I	RGATCY	2 cut(s)	187, 548
BstYI	RGATCY	2 cut(s)	187, 548
BstZI	CGGCCG	2 cut(s)	319, 441
BsuRI	GGCC	8 cut(s)	321, 359, 434, 443, 704, 790, 1157, 1208
BtgI	CCRYGG	2 cut(s)	180, 322
BtgZI	GCGATG	1 cut(s)	27
BtsCI	GGATG	1 cut(s)	900
BtsI	GCAGTG	1 cut(s)	927
BtsIMutI	CAGTG	3 cut(s)	927, 973, 1216
BtuMI	TCGCGA	1 cut(s)	381
CciI	TCATGA	1 cut(s)	1008
CfoI	GCGC	5 cut(s)	155, 330, 349, 356, 1033
Cfr10I	RCCGGY	5 cut(s)	343, 439, 464, 1173, 1248
Cfr13I	GGNCC	2 cut(s)	285, 1215
Cfr42I	CCGCGG	2 cut(s)	183, 325
CseI	GACGC	2 cut(s)	667, 741
Csp6I	GTAC	3 cut(s)	976, 1171, 1260
CspCI	CAANNNNNGTGG	2 cut(s)	949, 984
CviAII	CATG	8 cut(s)	526, 685, 772, 988, 1009, 1129, 1150, 1180
CviQI	GTAC	3 cut(s)	976, 1171, 1260
DdeI	CTNAG	2 cut(s)	545, 1275
DinI	GGCGCC	1 cut(s)	329
DpnI	GATC	9 cut(s)	18, 99, 189, 194, 413, 449, 473, 550, 1119
DpnII	GATC	9 cut(s)	16, 97, 187, 192, 411, 447, 471, 548, 1117
DriI	GACNNNNNGTC	1 cut(s)	652
EaeI	YGGCCR	4 cut(s)	319, 357, 441, 1155
EagI	CGGCCG	2 cut(s)	319, 441
Eam1104I	CTCTTC	1 cut(s)	776
Eam1105I	GACNNNNNGTC	1 cut(s)	652
EarI	CTCTTC	1 cut(s)	776
EciI	GGCGGA	5 cut(s)	130, 625, 776, 1095, 1107
EclXI	CGGCCG	2 cut(s)	319, 441
Eco24I	GRGCYC	2 cut(s)	261, 1164
Eco31I	GGTCTC	1 cut(s)	927
Eco47I	GGWCC	2 cut(s)	285, 1215
Eco47III	AGCGCT	2 cut(s)	154, 1032
Eco52I	CGGCCG	2 cut(s)	319, 441
Eco57I	CTGAAG	1 cut(s)	683
EcoNI	CCTNNNNNAGG	1 cut(s)	428
EcoO109I	RGGNCCY	1 cut(s)	1215
EcoRII	CCWGG	1 cut(s)	359
EcoT38I	GRGCYC	2 cut(s)	261, 1164
EgeI	GGCGCC	1 cut(s)	329
EheI	GGCGCC	1 cut(s)	329
FaeI	CATG	8 cut(s)	529, 688, 775, 991, 1012, 1132, 1153, 1183
FaqI	GGGAC	2 cut(s)	402, 1201
FatI	CATG	8 cut(s)	525, 684, 771, 987, 1008, 1128, 1149, 1179
FauI	CCCGC	1 cut(s)	317
FbaI	TGATCA	1 cut(s)	16
FblI	GTMKAC	2 cut(s)	315, 656
FokI	GGATG	1 cut(s)	907
FriOI	GRGCYC	2 cut(s)	261, 1164
FspBI	CTAG	2 cut(s)	167, 1263
GlaI	GCGC	5 cut(s)	154, 329, 348, 355, 1032
GsaI	CCCAGC	2 cut(s)	389, 479
GsuI	CTGGAG	1 cut(s)	410
HaeII	RGCGCY	4 cut(s)	156, 331, 350, 1034
HaeIII	GGCC	8 cut(s)	321, 359, 434, 443, 704, 790, 1157, 1208
HgaI	GACGC	2 cut(s)	667, 741
HhaI	GCGC	5 cut(s)	155, 330, 349, 356, 1033
Hin1I	GRCGYC	2 cut(s)	328, 752
Hin1II	CATG	8 cut(s)	529, 688, 775, 991, 1012, 1132, 1153, 1183
Hin6I	GCGC	5 cut(s)	153, 328, 347, 354, 1031
HinP1I	GCGC	5 cut(s)	153, 328, 347, 354, 1031
HincII	GTYRAC	2 cut(s)	316, 657
HindII	GTYRAC	2 cut(s)	316, 657
HinfI	GANTC	4 cut(s)	613, 808, 877, 1190
HphI	GGTGA	4 cut(s)	56, 226, 1185, 1259
Hpy166II	GTNNAC	2 cut(s)	316, 657
Hpy188I	TCNGA	8 cut(s)	102, 192, 400, 548, 600, 646, 745, 1189
Hpy188III	TCNNGA	5 cut(s)	380, 673, 846, 1009, 1018
Hpy8I	GTNNAC	2 cut(s)	316, 657
Hpy99I	CGWCG	9 cut(s)	251, 320, 404, 541, 580, 658, 661, 1139, 1247
HpyAV	CCTTC	4 cut(s)	171, 771, 780, 963
HpyCH4III	ACNGT	3 cut(s)	727, 968, 1103
HpyCH4IV	ACGT	1 cut(s)	718
HpyCH4V	TGCA	3 cut(s)	688, 835, 1003
HpyF3I	CTNAG	2 cut(s)	545, 1275
HpySE526I	ACGT	1 cut(s)	718
Hsp92I	GRCGYC	2 cut(s)	328, 752
Hsp92II	CATG	8 cut(s)	529, 688, 775, 991, 1012, 1132, 1153, 1183
HspAI	GCGC	5 cut(s)	153, 328, 347, 354, 1031
KasI	GGCGCC	1 cut(s)	327
KflI	GGGWCCC	1 cut(s)	1215
Kpn2I	TCCGGA	1 cut(s)	845
KroI	GCCGGC	1 cut(s)	343
KroNI	GCCGGC	1 cut(s)	345
Ksp22I	TGATCA	1 cut(s)	16
KspI	CCGCGG	2 cut(s)	183, 325
Kzo9I	GATC	9 cut(s)	16, 97, 187, 192, 411, 447, 471, 548, 1117
LmnI	GCTCC	6 cut(s)	134, 426, 518, 848, 848, 1067
LweI	GCATC	5 cut(s)	70, 230, 885, 1026, 1234
MaeI	CTAG	2 cut(s)	167, 1263
MaeII	ACGT	1 cut(s)	718
MaeIII	GTNAC	3 cut(s)	232, 1191, 1265
MalI	GATC	9 cut(s)	18, 99, 189, 194, 413, 449, 473, 550, 1119
MbiI	CCGCTC	1 cut(s)	930
MboI	GATC	9 cut(s)	16, 97, 187, 192, 411, 447, 471, 548, 1117
MboII	GAAGA	4 cut(s)	115, 122, 543, 793
MflI	RGATCY	2 cut(s)	187, 548
MhlI	GDGCHC	2 cut(s)	261, 1164
MluCI	AATT	5 cut(s)	568, 667, 886, 904, 939
Mly113I	GGCGCC	1 cut(s)	328
MlyI	GAGTC	1 cut(s)	1199
MmeI	TCCRAC	4 cut(s)	112, 156, 423, 714
MroI	TCCGGA	1 cut(s)	845
MroNI	GCCGGC	1 cut(s)	343
MslI	CAYNNNNRTG	2 cut(s)	338, 530
MspA1I	CMGCKG	5 cut(s)	182, 324, 607, 758, 1144
MspR9I	CCNGG	4 cut(s)	361, 857, 1025, 1159
Mva1269I	GAATGC	2 cut(s)	333, 345
MvaI	CCWGG	1 cut(s)	361
MvnI	CGCG	4 cut(s)	182, 324, 356, 381
NaeI	GCCGGC	1 cut(s)	345
NarI	GGCGCC	1 cut(s)	328
NciI	CCSGG	3 cut(s)	857, 1025, 1159
NdeII	GATC	9 cut(s)	16, 97, 187, 192, 411, 447, 471, 548, 1117
NgoMIV	GCCGGC	1 cut(s)	343
NlaIII	CATG	8 cut(s)	529, 688, 775, 991, 1012, 1132, 1153, 1183
NlaIV	GGNNCC	8 cut(s)	329, 422, 463, 534, 985, 1063, 1216, 1217
NmeAIII	GCCGAG	1 cut(s)	280
NmuCI	GTSAC	3 cut(s)	232, 1191, 1265
NruI	TCGCGA	1 cut(s)	381
NspI	RCATGY	3 cut(s)	529, 1153, 1183
NspV	TTCGAA	1 cut(s)	337
PagI	TCATGA	1 cut(s)	1008
PciI	ACATGT	1 cut(s)	1179
PcsI	WCGNNNNNNNCGW	2 cut(s)	650, 1251
PctI	GAATGC	2 cut(s)	333, 345
PdiI	GCCGGC	1 cut(s)	345
PfeI	GAWTC	3 cut(s)	613, 808, 877
Ple19I	CGATCG	1 cut(s)	414
PleI	GAGTC	1 cut(s)	1198
PluTI	GGCGCC	1 cut(s)	331
PpsI	GAGTC	1 cut(s)	1198
Ppu21I	YACGTR	1 cut(s)	719
PpuMI	RGGWCCY	1 cut(s)	1215
PscI	ACATGT	1 cut(s)	1179
PshAI	GACNNNNGTC	2 cut(s)	230, 394
Psp5II	RGGWCCY	1 cut(s)	1215
Psp6I	CCWGG	1 cut(s)	359
PspFI	CCCAGC	2 cut(s)	385, 475
PspGI	CCWGG	1 cut(s)	359
PspN4I	GGNNCC	8 cut(s)	329, 422, 463, 534, 985, 1063, 1216, 1217
PspPI	GGNCC	2 cut(s)	285, 1215
PspPPI	RGGWCCY	1 cut(s)	1215
PstI	CTGCAG	1 cut(s)	837
PsuI	RGATCY	2 cut(s)	187, 548
PvuI	CGATCG	1 cut(s)	414
PvuII	CAGCTG	1 cut(s)	1144
RruI	TCGCGA	1 cut(s)	381
RsaI	GTAC	3 cut(s)	977, 1172, 1261
RsaNI	GTAC	3 cut(s)	976, 1171, 1260
RseI	CAYNNNNRTG	2 cut(s)	338, 530
SacII	CCGCGG	2 cut(s)	183, 325
SalI	GTCGAC	2 cut(s)	314, 655
Sau3AI	GATC	9 cut(s)	16, 97, 187, 192, 411, 447, 471, 548, 1117
Sau96I	GGNCC	2 cut(s)	285, 1215
ScaI	AGTACT	1 cut(s)	1261
SchI	GAGTC	1 cut(s)	1199
ScrFI	CCNGG	4 cut(s)	361, 857, 1025, 1159
SduI	GDGCHC	2 cut(s)	261, 1164
SfaNI	GCATC	5 cut(s)	70, 230, 885, 1026, 1234
SfcI	CTRYAG	1 cut(s)	833
SfiI	GGCCNNNNNGGCC	1 cut(s)	440
SfoI	GGCGCC	1 cut(s)	329
Sfr303I	CCGCGG	2 cut(s)	183, 325
SfuI	TTCGAA	1 cut(s)	337
SgrBI	CCGCGG	2 cut(s)	183, 325
SgrDI	CGTCGACG	1 cut(s)	655
SinI	GGWCC	2 cut(s)	285, 1215
SmiMI	CAYNNNNRTG	2 cut(s)	338, 530
SpeI	ACTAGT	1 cut(s)	1262
Sse9I	AATT	5 cut(s)	568, 667, 886, 904, 939
SspDI	GGCGCC	1 cut(s)	327
SspMI	CTAG	2 cut(s)	167, 1263
StyD4I	CCNGG	4 cut(s)	359, 855, 1023, 1157
TaaI	ACNGT	3 cut(s)	727, 968, 1103
TaiI	ACGT	1 cut(s)	721
TaqI	TCGA	6 cut(s)	96, 224, 315, 337, 414, 656
TaqII	GACCGA	1 cut(s)	946
TasI	AATT	5 cut(s)	568, 667, 886, 904, 939
TatI	WGTACW	2 cut(s)	975, 1259
TfiI	GAWTC	3 cut(s)	613, 808, 877
TscAI	CASTG	3 cut(s)	927, 973, 1216
TseFI	GTSAC	3 cut(s)	232, 1191, 1265
Tsp45I	GTSAC	3 cut(s)	232, 1191, 1265
TspDTI	ATGAA	2 cut(s)	997, 1025
TspRI	CASTG	3 cut(s)	927, 973, 1216
VpaK11BI	GGWCC	2 cut(s)	285, 1215
XagI	CCTNNNNNAGG	1 cut(s)	428
XapI	RAATTY	1 cut(s)	886
XceI	RCATGY	3 cut(s)	529, 1153, 1183
XmiI	GTMKAC	2 cut(s)	315, 656
XspI	CTAG	2 cut(s)	167, 1263
ZrmI	AGTACT	1 cut(s)	1261

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.