Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0003641

Physical Location & Seq

Genomic Coordinates Reverse (-)

2909129 .. 2911891

Gene Structure 2763 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG039400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1281 bp

ATGGAAGGCGGCGATGATCATTTCCACCACCACCATCACCACTACCAACAACAGCAGCAGCAGCAGCATCACCACCGCCCCAACTTCCCATTCCAACTCCTCGATCAGAAGAAAGAAGACGAAGCCGCCTCCTGCTCCAACAACTCCGCCGCCGCCAGCGCTTATCCTTCTCTAGCTATTTCCAGCGCTGTAGATCCGATCAACCCAATAAACACCAACGCCACCGCATCGACAGCAGTCACCACCGCCGTCGCAGCCGAGCCCTCCAAGAAGCCCCCGCCCAAGCGGACCTCCACTAAAGACCGCCACACCAAAGTCGACGGCCGCGGGCGCCGCATTCGAATGCCGGCGCTCTGCGCGGCCAGAGTGTTCCAGCTCACTCGCGAGCTGGGACACAAGTCCGACGGCGAAACGATCGAGTGGCTCCTCCAGCAGGCCGAACCGGCCGTGATCGCCGCCACCGGAACCGGCACGATCCCAGCTAACTTCACTTCTCTAAATATCTCCCTACGAAGCTCCGGTTCAAGCATGTCGGTGCCGTCGCAGCTCAGATCTTCTTATTACAGCCCCAATTTCTCGTCGTCCATACACCAGAGTAGTCAGAACCAGCGGCGGAATCTGTTTCAGGGTCTGGGGCTTTCCTCCTCGGACAGCTCGTCGACGCTGCTCAATTTCCAGACCAACACCATGCACTCTATGCTTCAGGCCAAGCAGGAACTGCGTGATACGGTGTCGTTGGACTTATCCGAGGCGGCGTCAGCGGCGGAGGGAAGCATGGGAAGGAAGAGAAGGCCAGCCGAACAGGACTTGAATCAAATGGGAAGTGGGTATTTACTGCAGTCCAGCTCCGGAGCAATCCCGGCGAGCCACCACAGCCAGATTCCGGCCAATTTTTGGATGCTGGCTAATTCCAATAATCCAGCAGTGATGAGCGGAGACCCAATTTGGACATTTCCTTCCGTCAATAACAGTGGGTTGTACAGAGGCACCATGTCAGGCGGCTTGCATTTCATGAACTTCCCTACCCCGGTAGCGCTGATGCCAAGTCAGCAGCAGATGGGCGGCTCCGGCGGCGGTGGAGGCGGAGATAACGGCGGAAATGACGGTAGTGGTGGTGGAGATCATCACAACATGAGCGACGGGCAGCTGAACATGCTAGCCGGGCTCAACCCGTACCGGCACATGTCCTCGGAGTCACCGCAGCAGCAGGCCAGTGGGTCCCACTCGCATCACGGCGGCGGCGGCGACGACCGGCACGATAGTACTAGTCACCACTCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0008283 GO:0009719 GO:0009725 GO:0009735 GO:0009737 GO:0009739 GO:0009791 GO:0009889 GO:0010029 GO:0010033 GO:0010229 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0031347 GO:0032501 GO:0032502 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048367 GO:0048580 GO:0048583 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051239 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0080134 GO:0090567 GO:0097305 GO:0140110 GO:1900140 GO:1901700 GO:1903506 GO:2000026 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TCP

Protein Analysis

426

Amino Acids

45.53

Weight (kDa)

6.81

Isoelectric Point (pI)

64.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TCP	PF03634	97 - 232	8.6e-35	TCP family transcription factor

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0003641)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G69690
fragaria_vesca	FvH4_4g31520 FvH4_5g15150
malus_domestica	MD06G1191800.v1.1 MD13G1073500.v1.1 MD14G1198200.v1.1 MD16G1074800.v1.1
prunus_persica	Prupe.1G272500_v2.0.a1 Prupe.5G191200_v2.0.a1
pyrus_communis	pycom06g16990 pycom13g06580 pycom14g16460 pycom16g06480
rosa_chinensis	RchiOBHm_Chr4g0440011 RchiOBHm_Chr7g0181021
rosa_laevigata	RLG00000005218 RLG00000006215
rosa_multiflora	Rmu_sc0006000.1_g000009 Rmu_sc0007079.1_g000001
rosa_roxburghii	Rroxscaffold_3G00272330 Rroxscaffold_5G00380970
rosa_rugosa	Rorug04G0323300 Rorug06G0438600
rosa_samantha	Rh4AG295500 Rh4AG374300 Rh4BG301900 Rh4BG386600 Rh4CG401100 Rh4DG380900 Rh7AG039800 Rh7BG039200 Rh7CG041000 Rh7DG039400
rosa_wichuraiana	Rw4G032020 Rw7G003280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	330, 535, 986
AccB7I	CCANNNNNTGG	1 cut(s)	894
AccBSI	CCGCTC	1 cut(s)	933
AccI	GTMKAC	2 cut(s)	318, 659
AccII	CGCG	3 cut(s)	327, 359, 384
AccIII	TCCGGA	1 cut(s)	848
AclWI	GGATC	2 cut(s)	188, 469
AcoI	YGGCCR	4 cut(s)	322, 360, 444, 885
AcuI	CTGAAG	1 cut(s)	686
AcyI	GRCGYC	2 cut(s)	331, 755
AfaI	GTAC	3 cut(s)	980, 1175, 1264
AfeI	AGCGCT	3 cut(s)	160, 187, 1035
AfiI	CCNNNNNNNGG	4 cut(s)	433, 883, 894, 1027
AflIII	ACRYGT	1 cut(s)	1182
AgsI	TTSAA	2 cut(s)	525, 811
AhdI	GACNNNNNGTC	1 cut(s)	655
AhlI	ACTAGT	1 cut(s)	1265
AjuI	GAANNNNNNNTTGG	2 cut(s)	74, 106
AluBI	AGCT	9 cut(s)	176, 376, 388, 482, 516, 547, 654, 846, 1147
AluI	AGCT	9 cut(s)	176, 376, 388, 482, 516, 547, 654, 846, 1147
Alw26I	GTCTC	1 cut(s)	930
AlwI	GGATC	2 cut(s)	188, 469
AlwNI	CAGNNNCTG	2 cut(s)	631, 718
Aor13HI	TCCGGA	1 cut(s)	848
Aor51HI	AGCGCT	3 cut(s)	160, 187, 1035
AoxI	GGCC	8 cut(s)	322, 360, 435, 444, 705, 791, 885, 1209
AspLEI	GCGC	6 cut(s)	161, 188, 333, 352, 359, 1036
AspS9I	GGNCC	2 cut(s)	288, 1218
AsuC2I	CCSGG	3 cut(s)	860, 1028, 1162
AsuHPI	GGTGA	5 cut(s)	29, 62, 232, 1188, 1262
AsuII	TTCGAA	1 cut(s)	340
AsuNHI	GCTAGC	1 cut(s)	1156
AvaII	GGWCC	2 cut(s)	288, 1218
BanI	GGYRCC	3 cut(s)	330, 535, 986
BanII	GRGCYC	2 cut(s)	264, 1167
BbsI	GAAGAC	1 cut(s)	123
BccI	CCATC	2 cut(s)	42, 1051
BceAI	ACGGC	7 cut(s)	233, 337, 421, 431, 523, 1108, 1249
BclI	TGATCA	1 cut(s)	16
BcnI	CCSGG	3 cut(s)	860, 1028, 1162
BcoDI	GTCTC	1 cut(s)	930
BcuI	ACTAGT	1 cut(s)	1265
BfaI	CTAG	3 cut(s)	173, 1157, 1266
BfmI	CTRYAG	2 cut(s)	189, 836
BfoI	RGCGCY	5 cut(s)	162, 189, 334, 353, 1037
BglI	GCCNNNNNGGC	1 cut(s)	443
BglII	AGATCT	1 cut(s)	551
BmcAI	AGTACT	1 cut(s)	1264
Bme1390I	CCNGG	3 cut(s)	860, 1028, 1162
Bme18I	GGWCC	2 cut(s)	288, 1218
BmeRI	GACNNNNNGTC	1 cut(s)	655
BmgT120I	GGNCC	2 cut(s)	288, 1218
BmiI	GGNNCC	8 cut(s)	332, 425, 466, 537, 988, 1066, 1219, 1220
BmrFI	CCNGG	3 cut(s)	860, 1028, 1162
BmsI	GCATC	5 cut(s)	76, 236, 888, 1029, 1237
BmtI	GCTAGC	1 cut(s)	1160
BoxI	GACNNNNGTC	2 cut(s)	236, 397
BpiI	GAAGAC	1 cut(s)	123
BpmI	CTGGAG	1 cut(s)	413
Bpu14I	TTCGAA	1 cut(s)	340
BpuMI	CCSGG	3 cut(s)	860, 1028, 1162
BsaHI	GRCGYC	2 cut(s)	331, 755
BsaI	GGTCTC	1 cut(s)	930
BsaJI	CCNNGG	5 cut(s)	325, 645, 747, 1026, 1188
BsaWI	WCCGGW	3 cut(s)	461, 518, 848
Bsc4I	CCNNNNNNNGG	4 cut(s)	433, 883, 894, 1027
Bse118I	RCCGGY	5 cut(s)	346, 442, 467, 1176, 1251
Bse1I	ACTGG	1 cut(s)	1212
BseAI	TCCGGA	1 cut(s)	848
BseDI	CCNNGG	5 cut(s)	325, 645, 747, 1026, 1188
BseGI	GGATG	1 cut(s)	903
BseLI	CCNNNNNNNGG	4 cut(s)	433, 883, 894, 1027
BseMII	CTCAG	1 cut(s)	562
BseNI	ACTGG	1 cut(s)	1212
BseRI	GAGGAG	3 cut(s)	89, 416, 634
BseX3I	CGGCCG	2 cut(s)	322, 444
BseYI	CCCAGC	2 cut(s)	388, 478
Bsh1236I	CGCG	3 cut(s)	327, 359, 384
Bsh1285I	CGRYCG	4 cut(s)	325, 417, 447, 1252
BshFI	GGCC	8 cut(s)	324, 362, 437, 446, 707, 793, 887, 1211
BshNI	GGYRCC	3 cut(s)	330, 535, 986
BsiEI	CGRYCG	4 cut(s)	325, 417, 447, 1252
BslFI	GGGAC	2 cut(s)	405, 1204
BslI	CCNNNNNNNGG	4 cut(s)	433, 883, 894, 1027
BsmAI	GTCTC	1 cut(s)	930
BsmFI	GGGAC	2 cut(s)	405, 1204
BsmI	GAATGC	2 cut(s)	336, 348
BsnI	GGCC	8 cut(s)	324, 362, 437, 446, 707, 793, 887, 1211
Bso31I	GGTCTC	1 cut(s)	930
Bsp119I	TTCGAA	1 cut(s)	340
Bsp1286I	GDGCHC	2 cut(s)	264, 1167
Bsp13I	TCCGGA	1 cut(s)	848
Bsp1407I	TGTACA	1 cut(s)	978
Bsp143I	GATC	9 cut(s)	16, 103, 193, 198, 414, 450, 474, 551, 1120
Bsp68I	TCGCGA	1 cut(s)	384
BspANI	GGCC	8 cut(s)	324, 362, 437, 446, 707, 793, 887, 1211
BspCNI	CTCAG	1 cut(s)	561
BspEI	TCCGGA	1 cut(s)	848
BspFNI	CGCG	3 cut(s)	327, 359, 384
BspHI	TCATGA	1 cut(s)	1011
BspLI	GGNNCC	8 cut(s)	332, 425, 466, 537, 988, 1066, 1219, 1220
BspMAI	CTGCAG	1 cut(s)	840
BspOI	GCTAGC	1 cut(s)	1160
BspPI	GGATC	2 cut(s)	188, 469
BspT104I	TTCGAA	1 cut(s)	340
BspT107I	GGYRCC	3 cut(s)	330, 535, 986
BspTNI	GGTCTC	1 cut(s)	930
BsrBI	CCGCTC	1 cut(s)	933
BsrFI	RCCGGY	5 cut(s)	346, 442, 467, 1176, 1251
BsrGI	TGTACA	1 cut(s)	978
BsrI	ACTGG	1 cut(s)	1212
BssAI	RCCGGY	5 cut(s)	346, 442, 467, 1176, 1251
BssECI	CCNNGG	5 cut(s)	325, 645, 747, 1026, 1188
BssMI	GATC	9 cut(s)	16, 103, 193, 198, 414, 450, 474, 551, 1120
BssNI	GRCGYC	2 cut(s)	331, 755
Bst4CI	ACNGT	3 cut(s)	730, 971, 1106
Bst6I	CTCTTC	1 cut(s)	779
BstACI	GRCGYC	2 cut(s)	331, 755
BstAPI	GCANNNNNTGC	2 cut(s)	697, 718
BstAUI	TGTACA	1 cut(s)	978
BstBI	TTCGAA	1 cut(s)	340
BstDEI	CTNAG	2 cut(s)	548, 1278
BstDSI	CCRYGG	1 cut(s)	325
BstENI	CCTNNNNNAGG	1 cut(s)	431
BstF5I	GGATG	1 cut(s)	903
BstFNI	CGCG	3 cut(s)	327, 359, 384
BstH2I	RGCGCY	5 cut(s)	162, 189, 334, 353, 1037
BstHHI	GCGC	6 cut(s)	161, 188, 333, 352, 359, 1036
BstKTI	GATC	9 cut(s)	19, 106, 196, 201, 417, 453, 477, 554, 1123
BstMAI	GTCTC	1 cut(s)	930
BstMBI	GATC	9 cut(s)	16, 103, 193, 198, 414, 450, 474, 551, 1120
BstMCI	CGRYCG	4 cut(s)	325, 417, 447, 1252
BstNSI	RCATGY	3 cut(s)	532, 1156, 1186
BstPAI	GACNNNNGTC	2 cut(s)	236, 397
BstSCI	CCNGG	3 cut(s)	858, 1026, 1160
BstSFI	CTRYAG	2 cut(s)	189, 836
BstUI	CGCG	3 cut(s)	327, 359, 384
BstV2I	GAAGAC	1 cut(s)	123
BstX2I	RGATCY	2 cut(s)	193, 551
BstYI	RGATCY	2 cut(s)	193, 551
BstZI	CGGCCG	2 cut(s)	322, 444
BsuRI	GGCC	8 cut(s)	324, 362, 437, 446, 707, 793, 887, 1211
BtgI	CCRYGG	1 cut(s)	325
BtgZI	GCGATG	1 cut(s)	27
BtsCI	GGATG	1 cut(s)	903
BtsI	GCAGTG	1 cut(s)	930
BtsIMutI	CAGTG	3 cut(s)	930, 976, 1219
BtuMI	TCGCGA	1 cut(s)	384
CaiI	CAGNNNCTG	2 cut(s)	631, 718
CciI	TCATGA	1 cut(s)	1011
CfoI	GCGC	6 cut(s)	161, 188, 333, 352, 359, 1036
Cfr10I	RCCGGY	5 cut(s)	346, 442, 467, 1176, 1251
Cfr13I	GGNCC	2 cut(s)	288, 1218
Cfr42I	CCGCGG	1 cut(s)	328
CseI	GACGC	2 cut(s)	670, 744
Csp6I	GTAC	3 cut(s)	979, 1174, 1263
CspCI	CAANNNNNGTGG	2 cut(s)	952, 987
CviAII	CATG	8 cut(s)	529, 688, 775, 991, 1012, 1132, 1153, 1183
CviQI	GTAC	3 cut(s)	979, 1174, 1263
DdeI	CTNAG	2 cut(s)	548, 1278
DinI	GGCGCC	1 cut(s)	332
DpnI	GATC	9 cut(s)	18, 105, 195, 200, 416, 452, 476, 553, 1122
DpnII	GATC	9 cut(s)	16, 103, 193, 198, 414, 450, 474, 551, 1120
DriI	GACNNNNNGTC	1 cut(s)	655
EaeI	YGGCCR	4 cut(s)	322, 360, 444, 885
EagI	CGGCCG	2 cut(s)	322, 444
Eam1104I	CTCTTC	1 cut(s)	779
Eam1105I	GACNNNNNGTC	1 cut(s)	655
EarI	CTCTTC	1 cut(s)	779
EciI	GGCGGA	5 cut(s)	136, 628, 779, 1098, 1110
EclXI	CGGCCG	2 cut(s)	322, 444
Eco24I	GRGCYC	2 cut(s)	264, 1167
Eco31I	GGTCTC	1 cut(s)	930
Eco47I	GGWCC	2 cut(s)	288, 1218
Eco47III	AGCGCT	3 cut(s)	160, 187, 1035
Eco52I	CGGCCG	2 cut(s)	322, 444
Eco57I	CTGAAG	1 cut(s)	686
EcoNI	CCTNNNNNAGG	1 cut(s)	431
EcoO109I	RGGNCCY	1 cut(s)	1218
EcoT38I	GRGCYC	2 cut(s)	264, 1167
EgeI	GGCGCC	1 cut(s)	332
EheI	GGCGCC	1 cut(s)	332
FaeI	CATG	8 cut(s)	532, 691, 778, 994, 1015, 1135, 1156, 1186
FaqI	GGGAC	2 cut(s)	405, 1204
FatI	CATG	8 cut(s)	528, 687, 774, 990, 1011, 1131, 1152, 1182
FauI	CCCGC	2 cut(s)	285, 320
FbaI	TGATCA	1 cut(s)	16
FblI	GTMKAC	2 cut(s)	318, 659
FokI	GGATG	1 cut(s)	910
FriOI	GRGCYC	2 cut(s)	264, 1167
FspBI	CTAG	3 cut(s)	173, 1157, 1266
GlaI	GCGC	6 cut(s)	160, 187, 332, 351, 358, 1035
GsaI	CCCAGC	2 cut(s)	392, 482
GsuI	CTGGAG	1 cut(s)	413
HaeII	RGCGCY	5 cut(s)	162, 189, 334, 353, 1037
HaeIII	GGCC	8 cut(s)	324, 362, 437, 446, 707, 793, 887, 1211
HgaI	GACGC	2 cut(s)	670, 744
HhaI	GCGC	6 cut(s)	161, 188, 333, 352, 359, 1036
Hin1I	GRCGYC	2 cut(s)	331, 755
Hin1II	CATG	8 cut(s)	532, 691, 778, 994, 1015, 1135, 1156, 1186
Hin6I	GCGC	6 cut(s)	159, 186, 331, 350, 357, 1034
HinP1I	GCGC	6 cut(s)	159, 186, 331, 350, 357, 1034
HincII	GTYRAC	2 cut(s)	319, 660
HindII	GTYRAC	2 cut(s)	319, 660
HinfI	GANTC	4 cut(s)	616, 811, 880, 1193
HphI	GGTGA	5 cut(s)	29, 62, 232, 1188, 1262
Hpy166II	GTNNAC	2 cut(s)	319, 660
Hpy188I	TCNGA	8 cut(s)	108, 198, 403, 551, 603, 649, 748, 1192
Hpy188III	TCNNGA	4 cut(s)	383, 676, 849, 1012
Hpy8I	GTNNAC	2 cut(s)	319, 660
Hpy99I	CGWCG	9 cut(s)	254, 323, 407, 544, 583, 661, 664, 1142, 1250
HpyAV	CCTTC	4 cut(s)	177, 774, 783, 966
HpyCH4III	ACNGT	3 cut(s)	730, 971, 1106
HpyCH4V	TGCA	3 cut(s)	691, 838, 1006
HpyF3I	CTNAG	2 cut(s)	548, 1278
Hsp92I	GRCGYC	2 cut(s)	331, 755
Hsp92II	CATG	8 cut(s)	532, 691, 778, 994, 1015, 1135, 1156, 1186
HspAI	GCGC	6 cut(s)	159, 186, 331, 350, 357, 1034
KasI	GGCGCC	1 cut(s)	330
KflI	GGGWCCC	1 cut(s)	1218
Kpn2I	TCCGGA	1 cut(s)	848
KroI	GCCGGC	1 cut(s)	346
KroNI	GCCGGC	1 cut(s)	348
Ksp22I	TGATCA	1 cut(s)	16
KspI	CCGCGG	1 cut(s)	328
Kzo9I	GATC	9 cut(s)	16, 103, 193, 198, 414, 450, 474, 551, 1120
LmnI	GCTCC	6 cut(s)	140, 429, 521, 851, 851, 1070
LweI	GCATC	5 cut(s)	76, 236, 888, 1029, 1237
MaeI	CTAG	3 cut(s)	173, 1157, 1266
MaeIII	GTNAC	3 cut(s)	238, 1194, 1268
MalI	GATC	9 cut(s)	18, 105, 195, 200, 416, 452, 476, 553, 1122
MbiI	CCGCTC	1 cut(s)	933
MboI	GATC	9 cut(s)	16, 103, 193, 198, 414, 450, 474, 551, 1120
MboII	GAAGA	4 cut(s)	121, 128, 546, 796
MflI	RGATCY	2 cut(s)	193, 551
MhlI	GDGCHC	2 cut(s)	264, 1167
MluCI	AATT	5 cut(s)	571, 670, 889, 907, 942
Mly113I	GGCGCC	1 cut(s)	331
MlyI	GAGTC	1 cut(s)	1202
MmeI	TCCRAC	4 cut(s)	118, 162, 426, 717
MroI	TCCGGA	1 cut(s)	848
MroNI	GCCGGC	1 cut(s)	346
MslI	CAYNNNNRTG	2 cut(s)	341, 533
MspA1I	CMGCKG	4 cut(s)	327, 610, 761, 1147
MspR9I	CCNGG	3 cut(s)	860, 1028, 1162
Mva1269I	GAATGC	2 cut(s)	336, 348
MvnI	CGCG	3 cut(s)	327, 359, 384
NaeI	GCCGGC	1 cut(s)	348
NarI	GGCGCC	1 cut(s)	331
NciI	CCSGG	3 cut(s)	860, 1028, 1162
NdeII	GATC	9 cut(s)	16, 103, 193, 198, 414, 450, 474, 551, 1120
NgoMIV	GCCGGC	1 cut(s)	346
NheI	GCTAGC	1 cut(s)	1156
NlaIII	CATG	8 cut(s)	532, 691, 778, 994, 1015, 1135, 1156, 1186
NlaIV	GGNNCC	8 cut(s)	332, 425, 466, 537, 988, 1066, 1219, 1220
NmeAIII	GCCGAG	1 cut(s)	283
NmuCI	GTSAC	3 cut(s)	238, 1194, 1268
NruI	TCGCGA	1 cut(s)	384
NspI	RCATGY	3 cut(s)	532, 1156, 1186
NspV	TTCGAA	1 cut(s)	340
PagI	TCATGA	1 cut(s)	1011
PciI	ACATGT	1 cut(s)	1182
PcsI	WCGNNNNNNNCGW	2 cut(s)	653, 1254
PctI	GAATGC	2 cut(s)	336, 348
PdiI	GCCGGC	1 cut(s)	348
PfeI	GAWTC	3 cut(s)	616, 811, 880
PflMI	CCANNNNNTGG	1 cut(s)	894
Ple19I	CGATCG	1 cut(s)	417
PleI	GAGTC	1 cut(s)	1201
PluTI	GGCGCC	1 cut(s)	334
PpsI	GAGTC	1 cut(s)	1201
PpuMI	RGGWCCY	1 cut(s)	1218
PscI	ACATGT	1 cut(s)	1182
PshAI	GACNNNNGTC	2 cut(s)	236, 397
Psp5II	RGGWCCY	1 cut(s)	1218
PspFI	CCCAGC	2 cut(s)	388, 478
PspN4I	GGNNCC	8 cut(s)	332, 425, 466, 537, 988, 1066, 1219, 1220
PspPI	GGNCC	2 cut(s)	288, 1218
PspPPI	RGGWCCY	1 cut(s)	1218
PstI	CTGCAG	1 cut(s)	840
PstNI	CAGNNNCTG	2 cut(s)	631, 718
PsuI	RGATCY	2 cut(s)	193, 551
PvuI	CGATCG	1 cut(s)	417
PvuII	CAGCTG	1 cut(s)	1147
RruI	TCGCGA	1 cut(s)	384
RsaI	GTAC	3 cut(s)	980, 1175, 1264
RsaNI	GTAC	3 cut(s)	979, 1174, 1263
RseI	CAYNNNNRTG	2 cut(s)	341, 533
SacII	CCGCGG	1 cut(s)	328
SalI	GTCGAC	2 cut(s)	317, 658
Sau3AI	GATC	9 cut(s)	16, 103, 193, 198, 414, 450, 474, 551, 1120
Sau96I	GGNCC	2 cut(s)	288, 1218
ScaI	AGTACT	1 cut(s)	1264
SchI	GAGTC	1 cut(s)	1202
ScrFI	CCNGG	3 cut(s)	860, 1028, 1162
SduI	GDGCHC	2 cut(s)	264, 1167
SfaNI	GCATC	5 cut(s)	76, 236, 888, 1029, 1237
SfcI	CTRYAG	2 cut(s)	189, 836
SfiI	GGCCNNNNNGGCC	1 cut(s)	443
SfoI	GGCGCC	1 cut(s)	332
Sfr303I	CCGCGG	1 cut(s)	328
SfuI	TTCGAA	1 cut(s)	340
SgrBI	CCGCGG	1 cut(s)	328
SgrDI	CGTCGACG	1 cut(s)	658
SinI	GGWCC	2 cut(s)	288, 1218
SmiMI	CAYNNNNRTG	2 cut(s)	341, 533
SpeI	ACTAGT	1 cut(s)	1265
Sse9I	AATT	5 cut(s)	571, 670, 889, 907, 942
SspDI	GGCGCC	1 cut(s)	330
SspMI	CTAG	3 cut(s)	173, 1157, 1266
StyD4I	CCNGG	3 cut(s)	858, 1026, 1160
TaaI	ACNGT	3 cut(s)	730, 971, 1106
TaqI	TCGA	6 cut(s)	102, 230, 318, 340, 417, 659
TasI	AATT	5 cut(s)	571, 670, 889, 907, 942
TatI	WGTACW	2 cut(s)	978, 1262
TfiI	GAWTC	3 cut(s)	616, 811, 880
TscAI	CASTG	3 cut(s)	930, 976, 1219
TseFI	GTSAC	3 cut(s)	238, 1194, 1268
Tsp45I	GTSAC	3 cut(s)	238, 1194, 1268
TspDTI	ATGAA	2 cut(s)	1000, 1028
TspGWI	ACGGA	1 cut(s)	949
TspRI	CASTG	3 cut(s)	930, 976, 1219
Van91I	CCANNNNNTGG	1 cut(s)	894
VpaK11BI	GGWCC	2 cut(s)	288, 1218
XagI	CCTNNNNNAGG	1 cut(s)	431
XceI	RCATGY	3 cut(s)	532, 1156, 1186
XmiI	GTMKAC	2 cut(s)	318, 659
XspI	CTAG	3 cut(s)	173, 1157, 1266
ZrmI	AGTACT	1 cut(s)	1264

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.