Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0002627

Physical Location & Seq

Genomic Coordinates Reverse (-)

25914744 .. 25926324

Gene Structure 11581 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g35390.t4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2814 bp

ATGAAGAACGCGCCGAGCCGAGGCCTCGAAGTCTACGATTTCGTCGAGGAGGACGAGTTCCCGGACCCGGTCGTGAAATTCTCCGCCAAATTCAAAAACCCTAGCCGCGAAGATCGTCGGAAATCGAAGGTCGAGTCGCTCAAACCTGGTTCCAAAAAAGCCAACGTTCAAGCAAAAGAAATCAGCAGCATACCATGTGTAGATGTTGATGAAGGTGACACTGATCGCTGCTGTAAAAATACTATTTCTCATCCTCCTCTGGAGACAATTCAAGAGGAGCTTGCTTCCGAAAAAGAATTGAAATTTGATGATGCCACTGAATCCGAAATTTTAAGTCATGAACAACAATCTGATTTGGACAAAGTCAGTAGCACACCTTATACAGGGGTTGATGCGATGGACCATGATCATTGCAGTGATAGTGCTATTTTACATTCCCGTTTGGGGACAATAGAAGAGGATGCTGCTACACAATCCAATAGTCATGAACAACAGTCTGACTTAGATGACAATGGATGCAGAAATTTTCTTTCCGAAATAGAGATTGGAGTTTCAAATGCTCCCTCACCTTCCCACGGGAAAAGCCAGTTAGACTGTGGCCTTACAGTGTCCCCGTCAAATAACGATCCAGTTGATGTGATTTCAGATGCTGATGAAAGCACAAGTGAGTCTCCATCAAGTCCCCTGTCCCCAATTGAAGAGGATGACTGCCCAATGGAAGAGGATGACTACCCAATGGAAGAGGATGACGGTTCTTTGGGTACTTATGAATTGGGTCATTGCTCGGGAAATTTCGAAATGGATAATGTAAATACGACCGTTGTTCTTTATCCCGATTATGTTGTATATGGGGATAGTTATTGTACAGGAGCCCAGCAGTTAACTTTCTCTCACAGTTGCATCAAAATCAGTGGTTTAGTACCGTCTGAAAGTGACGAAACCTTAAATTTTGAATGGGCAGTTGGTGATGTTGTCAATGTTGAGTGTCAGTGGGTTCAAAATGCGGAATTTGTCATGATAAAACTCCGTGTACTATCAAAGGATGCAGATCAAGATGATGATGCACTTGGTATTTCAGGCATTGAGGAGTTGAAGATTGGAGTTGTTGAACCGAACTGGTCACAGCAACAAGAAAGAATAGCATGTTTAAATGATAAATATTTGGATATATTGGATCCTGTGCAAATCATGGAAGCGGGCGATTCACTTGGCCAGAGGCGTTATTTCCCAAATTTTGATGAGGATTTTGACACTTTTGTATATCCGGAGGGGGATCCTGATTCCGTTACCATCAGTAGGAGAGATGTTGATCTCTTACAGCCAGAGATATTTATTAACGATACATTGATCGACTTCTATATCAAGTATTTGGAAAATCAGATTCAACCAGACGAAAAGCACAGGTTCTACTTTTTCAATAGTTTTTTCTTCCGAAAGCTGGTTGACCTGGACAAGGATCCATCCAGTGTTGCTGGTGGCAGGGCTGCTTTCCAACGTGTCCGGAAATGGACAAGGAAAGTCGATTTGTTTGAAAAGGATTACATCTTCATCCCTGTAAACTTCAATCTACACTGGACTCTGATTGTTATATGTCATCCTGGTGAAGTGGCTAGATCTAACGTTAGAGACTCAGGCAAGGCAGTTAAAGTACCTTGTATATTGCACTTGGATTCCCTCAAAGGAAGTCATACAGGTCTCAAAAATCATGTTCAGAGTTATTTGTGGGAAGAGTGGAAAGAAAAGAAAAAGGAGACATCGGAAGAAATCTCATCAAACTTCCACAACCTGCGGTTCCTCTCACTGGAGCTGCCACAACAGGAAAATACATATGATTGTGGCCTGTTTTTGCTTCACTATCTAGAGCTGTTTCTGGAAGAAGCTCCTGCTATCTTCAATCCATTCCATATAAATAAGTTCTCCACCTTTCTAAATGCAAATTGGTTTCGTCCTTCAGAGGCTTCTCTCAAGCGCACTCTTATCCAGAGATTAATTTTTGAACTCATTGAAAATCGTTATCGGGAAGTCTGTTTGCCAGCTTGCAGTGATGTAGTGCAGGCTAAATATCCAGGATGTAACCAGCTTGAAATTGGTGCGGAGTTTCTTTCTGGAAGATCCAGTCCTGCAGTTGCTTGCCAAGCAAATATATCTATATCTAACTCTCAAGAAGAACACGGAATCGAAATGACTCTGTTACCCACATCTTCACTTAGGAGTTCTGAGTGCGTTAGTGATGCAGGCCTGGTTCTCAGGGAATTTTTTCAGTCAGGAGAAGCTGCAGGTTCACTATTTGGACAATATCAGTCTTTTGAACATAAATCTCCTTTTTACCATCCCAATGGAGCTAAACCACAATTAGAGGAAGAAACCCAAACTGGAGAGCAGTTTACCTATCTTGCTACAGGAGACGGTAGCTTTCAAGAAATATCTGAAATTACATCTCAAACTTGTGGCATTCAACGCTCTTCGAAATCTTTTGGAGCCGAGATTTCGTATAACTTGGAGACGTCTGAAAAGGCACCAAATGGAAACATTGAAGCATCCCCTGACAGATCAATTGCCTCTGATCATTCCGAAGGCATAGAGATCATTGAAAATGGTGATCATTCTAAAGCCATACAGATCATTGAAGATGATGCGGTTGGAGAAGATTTGGGTCCAAGCCAGAATGGAGAAATGGACGTACAGAATTATCCATCATTGCAAAGTGTCAGGAGCATGGAGAGGTCCATGATGGACATGAAATTGGAGGTCCAAGTCGGAGAGAAGAAGGGGATGTACCAACTTATCCATCAACAGAAAATGCCGAGTGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0006464 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0009987 GO:0016787 GO:0016926 GO:0016929 GO:0018193 GO:0018205 GO:0019538 GO:0019783 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0070011 GO:0070137 GO:0070139 GO:0070646 GO:0070647 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_C48

Protein Analysis

938

Amino Acids

105.25

Weight (kDa)

4.52

Isoelectric Point (pI)

55.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PH_ULP	PF25352	273 - 390	3.7e-43	Ubiquitin-like protease PH domain
Peptidase_C48	PF02902	445 - 644	2.8e-35	Ulp1 protease family, C-terminal catalytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002627)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09730 AT1G09730
fragaria_vesca	FvH4_3g25421 FvH4_5g35390 FvH4_5g35390 FvH4_5g35390 FvH4_5g35390
malus_domestica	MD08G1197400.v1.1 MD15G1385000.v1.1
prunus_persica	Prupe.6G149300_v2.0.a1 Prupe.6G149300_v2.0.a1 Prupe.6G149300_v2.0.a1 Prupe.6G149300_v2.0.a1 Prupe.6G149300_v2.0.a1 Prupe.6G149300_v2.0.a1 Prupe.6G149300_v2.0.a1 Prupe.6G149300_v2.0.a1 Prupe.6G149300_v2.0.a1 Prupe.6G149300_v2.0.a1 Prupe.6G149300_v2.0.a1 Prupe.6G149300_v2.0.a1 Prupe.6G149300_v2.0.a1
pyrus_communis	pycom08g16950 pycom08g16970 pycom15g34500
rosa_chinensis	RchiOBHm_Chr7g0236781
rosa_laevigata	RLG00000001062
rosa_multiflora	Rmu_sc0003720.1_g000028
rosa_roxburghii	Rroxscaffold_3G00224860
rosa_rugosa	Rorug07G0298800 Rorug07G0298900 Rorug07G0299000.1 Rorug07G0299100 Rorug07G0299200
rosa_samantha	Rh7AG454400 Rh7BG425600 Rh7CG472900 Rh7DG442100
rosa_wichuraiana	Rw7G037660 Rw7G037720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	2507
Acc36I	ACCTGC	2 cut(s)	1794, 2267
AccB1I	GGYRCC	1 cut(s)	2515
AccI	GTMKAC	1 cut(s)	33
AccII	CGCG	2 cut(s)	11, 108
AccIII	TCCGGA	2 cut(s)	1264, 1500
AciI	CCGC	7 cut(s)	84, 106, 1004, 1196, 1789, 2093, 2636
AclI	AACGTT	2 cut(s)	165, 1620
AclWI	GGATC	8 cut(s)	620, 1169, 1182, 1268, 1281, 1451, 1464, 2106
AcoI	YGGCCR	1 cut(s)	1210
AcuI	CTGAAG	1 cut(s)	1935
AcyI	GRCGYC	1 cut(s)	2504
AfaI	GTAC	7 cut(s)	763, 865, 921, 1032, 1650, 2682, 2777
AfiI	CCNNNNNNNGG	9 cut(s)	20, 67, 383, 444, 575, 1296, 1438, 1453, 1801
AflIII	ACRYGT	1 cut(s)	1495
AjnI	CCWGG	5 cut(s)	145, 1446, 1597, 2065, 2238
AjuI	GAANNNNNNNTTGG	4 cut(s)	528, 560, 945, 977
AloI	GAACNNNNNNTCC	2 cut(s)	41, 73
Alw26I	GTCTC	7 cut(s)	257, 675, 1620, 1700, 1745, 2397, 2495
AlwI	GGATC	8 cut(s)	620, 1169, 1182, 1268, 1281, 1451, 1464, 2106
AlwNI	CAGNNNCTG	1 cut(s)	650
Ama87I	CYCGRG	1 cut(s)	784
Aor13HI	TCCGGA	2 cut(s)	1264, 1500
AoxI	GGCC	5 cut(s)	22, 598, 1210, 1837, 2236
ApeKI	GCWGC	6 cut(s)	186, 228, 464, 1484, 1807, 2273
ArsI	GACNNNNNNTTYG	2 cut(s)	119, 151
AseI	ATTAAT	1 cut(s)	1988
Asp700I	GAANNNNTTC	1 cut(s)	2256
AspLEI	GCGC	2 cut(s)	13, 1971
AspS9I	GGNCC	5 cut(s)	64, 400, 2654, 2724, 2749
AsuC2I	CCSGG	2 cut(s)	62, 68
AsuHPI	GGTGA	5 cut(s)	227, 558, 977, 1613, 2609
AsuII	TTCGAA	2 cut(s)	795, 2465
AvaI	CYCGRG	1 cut(s)	784
AvaII	GGWCC	5 cut(s)	64, 400, 2654, 2724, 2749
BalI	TGGCCA	1 cut(s)	1212
BamHI	GGATCC	3 cut(s)	1174, 1273, 1456
BanI	GGYRCC	1 cut(s)	2515
BanII	GRGCYC	1 cut(s)	874
BarI	GAAGNNNNNNTAC	2 cut(s)	2759, 2791
BbvI	GCAGC	6 cut(s)	198, 215, 451, 1471, 1794, 2260
BccI	CCATC	8 cut(s)	391, 682, 1298, 1468, 2337, 2701, 2725, 2796
BciT130I	CCWGG	5 cut(s)	147, 1448, 1599, 2067, 2240
BclI	TGATCA	3 cut(s)	406, 2563, 2599
BcnI	CCSGG	2 cut(s)	62, 68
BcoDI	GTCTC	7 cut(s)	257, 675, 1620, 1700, 1745, 2397, 2495
BfaI	CTAG	3 cut(s)	102, 1611, 1859
BfmI	CTRYAG	3 cut(s)	2121, 2274, 2397
BfuAI	ACCTGC	2 cut(s)	1794, 2267
BglII	AGATCT	1 cut(s)	1613
BisI	GCNGC	7 cut(s)	106, 187, 229, 465, 1485, 1808, 2274
BlsI	GCNGC	7 cut(s)	107, 188, 230, 466, 1486, 1809, 2275
Bme1390I	CCNGG	7 cut(s)	62, 68, 147, 1448, 1599, 2067, 2240
Bme18I	GGWCC	5 cut(s)	64, 400, 2654, 2724, 2749
BmeT110I	CYCGRG	1 cut(s)	784
BmgT120I	GGNCC	5 cut(s)	64, 400, 2654, 2724, 2749
BmrFI	CCNGG	7 cut(s)	62, 68, 147, 1448, 1599, 2067, 2240
BpmI	CTGGAG	3 cut(s)	281, 1823, 2394
Bpu14I	TTCGAA	2 cut(s)	795, 2465
BpuEI	CTTGAG	2 cut(s)	1949, 2145
BpuMI	CCSGG	2 cut(s)	62, 68
BsaBI	GATNNNNATC	2 cut(s)	1047, 1308
BsaHI	GRCGYC	1 cut(s)	2504
BsaI	GGTCTC	1 cut(s)	1700
BsaJI	CCNNGG	2 cut(s)	19, 574
BsaWI	WCCGGW	2 cut(s)	1264, 1500
BsaXI	ACNNNNNCTCC	2 cut(s)	41, 71
Bsc4I	CCNNNNNNNGG	9 cut(s)	20, 67, 383, 444, 575, 1296, 1438, 1453, 1801
Bse1I	ACTGG	8 cut(s)	586, 629, 1121, 1464, 1577, 1806, 2115, 2377
Bse3DI	GCAATG	3 cut(s)	409, 778, 2696
Bse8I	GATNNNNATC	2 cut(s)	1047, 1308
BseAI	TCCGGA	2 cut(s)	1264, 1500
BseBI	CCWGG	5 cut(s)	147, 1448, 1599, 2067, 2240
BseDI	CCNNGG	2 cut(s)	19, 574
BseJI	GATNNNNATC	2 cut(s)	1047, 1308
BseLI	CCNNNNNNNGG	9 cut(s)	20, 67, 383, 444, 575, 1296, 1438, 1453, 1801
BseMI	GCAATG	3 cut(s)	409, 778, 2696
BseMII	CTCAG	3 cut(s)	1644, 2208, 2260
BseNI	ACTGG	8 cut(s)	586, 629, 1121, 1464, 1577, 1806, 2115, 2377
BseRI	GAGGAG	4 cut(s)	62, 246, 290, 1100
BseXI	GCAGC	6 cut(s)	198, 215, 451, 1471, 1794, 2260
BseYI	CCCAGC	1 cut(s)	873
BsgI	GTGCAG	1 cut(s)	2072
Bsh1236I	CGCG	2 cut(s)	11, 108
Bsh1285I	CGRYCG	2 cut(s)	72, 819
BshFI	GGCC	5 cut(s)	24, 600, 1212, 1839, 2238
BshNI	GGYRCC	1 cut(s)	2515
BsiEI	CGRYCG	2 cut(s)	72, 819
BsiHKCI	CYCGRG	1 cut(s)	784
BsiSI	CCGG	4 cut(s)	62, 68, 1265, 1501
BslFI	GGGAC	4 cut(s)	460, 595, 666, 673
BslI	CCNNNNNNNGG	9 cut(s)	20, 67, 383, 444, 575, 1296, 1438, 1453, 1801
BsmAI	GTCTC	7 cut(s)	257, 675, 1620, 1700, 1745, 2397, 2495
BsmBI	CGTCTC	2 cut(s)	2397, 2495
BsmFI	GGGAC	4 cut(s)	460, 595, 666, 673
BsmI	GAATGC	1 cut(s)	2451
BsnI	GGCC	5 cut(s)	24, 600, 1212, 1839, 2238
Bso31I	GGTCTC	1 cut(s)	1700
BsoBI	CYCGRG	1 cut(s)	784
Bsp119I	TTCGAA	2 cut(s)	795, 2465
Bsp1286I	GDGCHC	1 cut(s)	874
Bsp13I	TCCGGA	2 cut(s)	1264, 1500
Bsp1407I	TGTACA	1 cut(s)	863
BspACI	CCGC	7 cut(s)	84, 106, 1004, 1196, 1789, 2093, 2636
BspANI	GGCC	5 cut(s)	24, 600, 1212, 1839, 2238
BspCNI	CTCAG	3 cut(s)	1643, 2209, 2259
BspEI	TCCGGA	2 cut(s)	1264, 1500
BspFNI	CGCG	2 cut(s)	11, 108
BspHI	TCATGA	3 cut(s)	337, 484, 1014
BspMAI	CTGCAG	2 cut(s)	2125, 2278
BspMI	ACCTGC	2 cut(s)	1794, 2267
BspPI	GGATC	8 cut(s)	620, 1169, 1182, 1268, 1281, 1451, 1464, 2106
BspQI	GCTCTTC	1 cut(s)	2467
BspT104I	TTCGAA	2 cut(s)	795, 2465
BspT107I	GGYRCC	1 cut(s)	2515
BspTNI	GGTCTC	1 cut(s)	1700
BsrDI	GCAATG	3 cut(s)	409, 778, 2696
BsrGI	TGTACA	1 cut(s)	863
BsrI	ACTGG	8 cut(s)	586, 629, 1121, 1464, 1577, 1806, 2115, 2377
BssECI	CCNNGG	2 cut(s)	19, 574
BssNI	GRCGYC	1 cut(s)	2504
Bst2UI	CCWGG	5 cut(s)	147, 1448, 1599, 2067, 2240
Bst4CI	ACNGT	8 cut(s)	495, 596, 607, 752, 820, 896, 924, 2408
Bst6I	CTCTTC	6 cut(s)	450, 693, 714, 735, 1722, 2467
BstACI	GRCGYC	1 cut(s)	2504
BstAUI	TGTACA	1 cut(s)	863
BstBI	TTCGAA	2 cut(s)	795, 2465
BstC8I	GCNNGC	7 cut(s)	282, 1198, 2034, 2038, 2055, 2131, 2236
BstDEI	CTNAG	5 cut(s)	502, 1630, 2207, 2217, 2246
BstDSI	CCRYGG	1 cut(s)	574
BstENI	CCTNNNNNAGG	2 cut(s)	381, 1451
BstFNI	CGCG	2 cut(s)	11, 108
BstHHI	GCGC	2 cut(s)	13, 1971
BstMAI	GTCTC	7 cut(s)	257, 675, 1620, 1700, 1745, 2397, 2495
BstMCI	CGRYCG	2 cut(s)	72, 819
BstMWI	GCNNNNNNNGC	2 cut(s)	2135, 2457
BstNI	CCWGG	5 cut(s)	147, 1448, 1599, 2067, 2240
BstNSI	RCATGY	1 cut(s)	1146
BstSCI	CCNGG	7 cut(s)	60, 66, 145, 1446, 1597, 2065, 2238
BstSFI	CTRYAG	3 cut(s)	2121, 2274, 2397
BstUI	CGCG	2 cut(s)	11, 108
BstV1I	GCAGC	6 cut(s)	198, 215, 451, 1471, 1794, 2260
BstX2I	RGATCY	5 cut(s)	1174, 1273, 1456, 1613, 2111
BstXI	CCANNNNNNTGG	1 cut(s)	2336
BstYI	RGATCY	5 cut(s)	1174, 1273, 1456, 1613, 2111
BsuRI	GGCC	5 cut(s)	24, 600, 1212, 1839, 2238
BtgI	CCRYGG	1 cut(s)	574
BtgZI	GCGATG	1 cut(s)	410
BtsI	GCAGTG	2 cut(s)	421, 2047
BveI	ACCTGC	2 cut(s)	1794, 2267
Cac8I	GCNNGC	7 cut(s)	282, 1198, 2034, 2038, 2055, 2131, 2236
CaiI	CAGNNNCTG	1 cut(s)	650
CciI	TCATGA	3 cut(s)	337, 484, 1014
CfoI	GCGC	2 cut(s)	13, 1971
Cfr13I	GGNCC	5 cut(s)	64, 400, 2654, 2724, 2749
CsiI	ACCWGGT	1 cut(s)	145
Csp6I	GTAC	7 cut(s)	762, 864, 920, 1031, 1649, 2681, 2776
CspCI	CAANNNNNGTGG	2 cut(s)	892, 927
CviQI	GTAC	7 cut(s)	762, 864, 920, 1031, 1649, 2681, 2776
DdeI	CTNAG	5 cut(s)	502, 1630, 2207, 2217, 2246
DraI	TTTAAA	1 cut(s)	1149
EaeI	YGGCCR	1 cut(s)	1210
Eam1104I	CTCTTC	6 cut(s)	450, 693, 714, 735, 1722, 2467
EarI	CTCTTC	6 cut(s)	450, 693, 714, 735, 1722, 2467
EciI	GGCGGA	1 cut(s)	73
Eco147I	AGGCCT	2 cut(s)	24, 2238
Eco24I	GRGCYC	1 cut(s)	874
Eco31I	GGTCTC	1 cut(s)	1700
Eco47I	GGWCC	5 cut(s)	64, 400, 2654, 2724, 2749
Eco57I	CTGAAG	1 cut(s)	1935
Eco88I	CYCGRG	1 cut(s)	784
EcoNI	CCTNNNNNAGG	2 cut(s)	381, 1451
EcoRII	CCWGG	5 cut(s)	145, 1446, 1597, 2065, 2238
EcoT38I	GRGCYC	1 cut(s)	874
Esp3I	CGTCTC	2 cut(s)	2397, 2495
FalI	AAGNNNNNCTT	2 cut(s)	264, 296
FaqI	GGGAC	4 cut(s)	460, 595, 666, 673
FauI	CCCGC	1 cut(s)	1189
FauNDI	CATATG	1 cut(s)	1828
FbaI	TGATCA	3 cut(s)	406, 2563, 2599
FblI	GTMKAC	1 cut(s)	33
Fnu4HI	GCNGC	7 cut(s)	106, 187, 229, 465, 1485, 1808, 2274
FriOI	GRGCYC	1 cut(s)	874
Fsp4HI	GCNGC	7 cut(s)	106, 187, 229, 465, 1485, 1808, 2274
FspBI	CTAG	3 cut(s)	102, 1611, 1859
GlaI	GCGC	2 cut(s)	12, 1970
GluI	GCNGC	7 cut(s)	106, 187, 229, 465, 1485, 1808, 2274
GsaI	CCCAGC	1 cut(s)	877
GsuI	CTGGAG	3 cut(s)	281, 1823, 2394
HaeIII	GGCC	5 cut(s)	24, 600, 1212, 1839, 2238
HapII	CCGG	4 cut(s)	62, 68, 1265, 1501
HhaI	GCGC	2 cut(s)	13, 1971
Hin1I	GRCGYC	1 cut(s)	2504
Hin6I	GCGC	2 cut(s)	11, 1969
HinP1I	GCGC	2 cut(s)	11, 1969
HincII	GTYRAC	2 cut(s)	882, 1444
HindII	GTYRAC	2 cut(s)	882, 1444
HpaI	GTTAAC	1 cut(s)	882
HpaII	CCGG	4 cut(s)	62, 68, 1265, 1501
HphI	GGTGA	5 cut(s)	227, 558, 977, 1613, 2609
Hpy166II	GTNNAC	7 cut(s)	34, 882, 1031, 1444, 1558, 2282, 2385
Hpy8I	GTNNAC	7 cut(s)	34, 882, 1031, 1444, 1558, 2282, 2385
Hpy99I	CGWCG	2 cut(s)	47, 120
HpyAV	CCTTC	6 cut(s)	121, 206, 579, 1959, 2567, 2761
HpyCH4III	ACNGT	8 cut(s)	495, 596, 607, 752, 820, 896, 924, 2408
HpyCH4IV	ACGT	5 cut(s)	165, 1495, 1620, 2504, 2679
HpyF10VI	GCNNNNNNNGC	2 cut(s)	2135, 2457
HpyF3I	CTNAG	5 cut(s)	502, 1630, 2207, 2217, 2246
HpySE526I	ACGT	5 cut(s)	165, 1495, 1620, 2504, 2679
Hsp92I	GRCGYC	1 cut(s)	2504
HspAI	GCGC	2 cut(s)	11, 1969
Kpn2I	TCCGGA	2 cut(s)	1264, 1500
Ksp22I	TGATCA	3 cut(s)	406, 2563, 2599
KspAI	GTTAAC	1 cut(s)	882
LguI	GCTCTTC	1 cut(s)	2467
LmnI	GCTCC	8 cut(s)	277, 565, 869, 1804, 1885, 2339, 2477, 2712
Lsp1109I	GCAGC	6 cut(s)	198, 215, 451, 1471, 1794, 2260
MabI	ACCWGGT	1 cut(s)	145
MaeI	CTAG	3 cut(s)	102, 1611, 1859
MaeII	ACGT	5 cut(s)	165, 1495, 1620, 2504, 2679
MaeIII	GTNAC	6 cut(s)	215, 932, 1119, 1285, 2072, 2190
MfeI	CAATTG	2 cut(s)	693, 2553
MflI	RGATCY	5 cut(s)	1174, 1273, 1456, 1613, 2111
MhlI	GDGCHC	1 cut(s)	874
MlsI	TGGCCA	1 cut(s)	1212
MluNI	TGGCCA	1 cut(s)	1212
MlyI	GAGTC	5 cut(s)	143, 677, 1570, 1622, 2179
MmeI	TCCRAC	4 cut(s)	98, 1516, 2620, 2737
Mox20I	TGGCCA	1 cut(s)	1212
MroI	TCCGGA	2 cut(s)	1264, 1500
MroXI	GAANNNNTTC	1 cut(s)	2256
MscI	TGGCCA	1 cut(s)	1212
MseI	TTAA	7 cut(s)	332, 881, 944, 1148, 1335, 1644, 1988
MslI	CAYNNNNRTG	3 cut(s)	414, 1599, 2334
Msp20I	TGGCCA	1 cut(s)	1212
MspI	CCGG	4 cut(s)	62, 68, 1265, 1501
MspR9I	CCNGG	7 cut(s)	62, 68, 147, 1448, 1599, 2067, 2240
MunI	CAATTG	2 cut(s)	693, 2553
Mva1269I	GAATGC	1 cut(s)	2451
MvaI	CCWGG	5 cut(s)	147, 1448, 1599, 2067, 2240
MvnI	CGCG	2 cut(s)	11, 108
MwoI	GCNNNNNNNGC	2 cut(s)	2135, 2457
NciI	CCSGG	2 cut(s)	62, 68
NdeI	CATATG	1 cut(s)	1828
NmeAIII	GCCGAG	3 cut(s)	39, 44, 2506
NmuCI	GTSAC	3 cut(s)	215, 932, 1119
NspI	RCATGY	1 cut(s)	1146
NspV	TTCGAA	2 cut(s)	795, 2465
PagI	TCATGA	3 cut(s)	337, 484, 1014
PceI	AGGCCT	2 cut(s)	24, 2238
PciSI	GCTCTTC	1 cut(s)	2467
PcsI	WCGNNNNNNNCGW	3 cut(s)	33, 42, 51
PctI	GAATGC	1 cut(s)	2451
PdmI	GAANNNNTTC	1 cut(s)	2256
PfeI	GAWTC	6 cut(s)	320, 1202, 1280, 1381, 1670, 2175
PflFI	GACNNNGTC	2 cut(s)	68, 362
PfoI	TCCNGGA	2 cut(s)	60, 2065
PkrI	GCNGC	7 cut(s)	107, 188, 230, 466, 1486, 1809, 2275
PleI	GAGTC	5 cut(s)	142, 676, 1570, 1622, 2179
PpsI	GAGTC	5 cut(s)	142, 676, 1570, 1622, 2179
PshBI	ATTAAT	1 cut(s)	1988
Psp1406I	AACGTT	2 cut(s)	165, 1620
Psp6I	CCWGG	5 cut(s)	145, 1446, 1597, 2065, 2238
PspFI	CCCAGC	1 cut(s)	873
PspGI	CCWGG	5 cut(s)	145, 1446, 1597, 2065, 2238
PspPI	GGNCC	5 cut(s)	64, 400, 2654, 2724, 2749
PstI	CTGCAG	2 cut(s)	2125, 2278
PstNI	CAGNNNCTG	1 cut(s)	650
PsuI	RGATCY	5 cut(s)	1174, 1273, 1456, 1613, 2111
PsyI	GACNNNGTC	2 cut(s)	68, 362
RsaI	GTAC	7 cut(s)	763, 865, 921, 1032, 1650, 2682, 2777
RsaNI	GTAC	7 cut(s)	762, 864, 920, 1031, 1649, 2681, 2776
RseI	CAYNNNNRTG	3 cut(s)	414, 1599, 2334
SapI	GCTCTTC	1 cut(s)	2467
SaqAI	TTAA	7 cut(s)	332, 881, 944, 1148, 1335, 1644, 1988
SatI	GCNGC	7 cut(s)	106, 187, 229, 465, 1485, 1808, 2274
Sau96I	GGNCC	5 cut(s)	64, 400, 2654, 2724, 2749
SchI	GAGTC	5 cut(s)	143, 677, 1570, 1622, 2179
ScrFI	CCNGG	7 cut(s)	62, 68, 147, 1448, 1599, 2067, 2240
SduI	GDGCHC	1 cut(s)	874
SexAI	ACCWGGT	1 cut(s)	145
SfcI	CTRYAG	3 cut(s)	2121, 2274, 2397
SfuI	TTCGAA	2 cut(s)	795, 2465
SinI	GGWCC	5 cut(s)	64, 400, 2654, 2724, 2749
SmiMI	CAYNNNNRTG	3 cut(s)	414, 1599, 2334
SmlI	CTYRAG	2 cut(s)	1964, 2160
SmoI	CTYRAG	2 cut(s)	1964, 2160
SseBI	AGGCCT	2 cut(s)	24, 2238
SsiI	CCGC	7 cut(s)	84, 106, 1004, 1196, 1789, 2093, 2636
SspI	AATATT	1 cut(s)	1160
SspMI	CTAG	3 cut(s)	102, 1611, 1859
StuI	AGGCCT	2 cut(s)	24, 2238
StyD4I	CCNGG	7 cut(s)	60, 66, 145, 1446, 1597, 2065, 2238
TaaI	ACNGT	8 cut(s)	495, 596, 607, 752, 820, 896, 924, 2408
TaiI	ACGT	5 cut(s)	168, 1498, 1623, 2507, 2682
TaqI	TCGA	9 cut(s)	27, 45, 125, 132, 795, 1350, 1521, 2178, 2465
TatI	WGTACW	2 cut(s)	863, 1030
TauI	GCSGC	1 cut(s)	108
TfiI	GAWTC	6 cut(s)	320, 1202, 1280, 1381, 1670, 2175
Tru1I	TTAA	7 cut(s)	332, 881, 944, 1148, 1335, 1644, 1988
Tru9I	TTAA	7 cut(s)	332, 881, 944, 1148, 1335, 1644, 1988
TseFI	GTSAC	3 cut(s)	215, 932, 1119
TseI	GCWGC	6 cut(s)	186, 228, 464, 1484, 1807, 2273
Tsp45I	GTSAC	3 cut(s)	215, 932, 1119
TspDTI	ATGAA	8 cut(s)	17, 225, 354, 501, 669, 783, 1537, 2753
TspGWI	ACGGA	3 cut(s)	1016, 1273, 2187
Tth111I	GACNNNGTC	2 cut(s)	68, 362
VpaK11BI	GGWCC	5 cut(s)	64, 400, 2654, 2724, 2749
VspI	ATTAAT	1 cut(s)	1988
XagI	CCTNNNNNAGG	2 cut(s)	381, 1451
XbaI	TCTAGA	1 cut(s)	1858
XceI	RCATGY	1 cut(s)	1146
XcmI	CCANNNNNNNNNTGG	2 cut(s)	593, 2084
XmiI	GTMKAC	1 cut(s)	33
XmnI	GAANNNNTTC	1 cut(s)	2256
XspI	CTAG	3 cut(s)	102, 1611, 1859
ZraI	GACGTC	1 cut(s)	2505

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.