Rh7AG454400

protease

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Reverse (-)
62376835 .. 62390595
13761 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG454400.1

Sequence Viewer

Length: 3768 bp
ATGAATAGCGCACCGCCGCGGAGAGGCCTCGAAGTCTACGATTTCGTCGAAGAGGACGAGTTCCCGGACCCGGTCGTCAAATTTTCCGGCAAACTCAAAAACCCTAGCCGCGAGGACCATCGGAATTCGAAGGACGAGTTTCTCCAACCTGGTTCGAAAGAAGCCAACGTTCAAGCCAAAGAAATCAGTAGCATACCTTGTGTAGAAGTTGATGAAGTTGACACTGACCACTGTTGTAAAAATGCTATTTCTCATTCTCCTCGGTATACAATTGAAGAGAGGCTTGCCATCATAAATGATTTGAAACTCAGTGCTGCCACAGACTCCAGTCATGAACAATCTGATTTATGTTCAAAAGAAGCCAACGTTCAAGCCAAAGAAATCAGTAGCATACCTTGTGTAGGTGTTGATGAAGTTGACACTGACCACTGTTGTAAAAATGCTATTTCTCATTCTCCTCTGTATACAATTGAAGAGAGGCGTGCTATCATAAATGATTTGAAATTGAGTGCTGCCACAGACTCCAGTCATGAACAACAATCTGATTTATGTTCAAAAGAAGCCAACGTTCAAGCCAAAGAAATCAGTAGCATACCTTGTGTAGGTGTTGATGAAGTTGACACTGACCACTGTTGTAAAAATGCTATTTCTCATTCTCCTCTGTATACAATTGAAGAGAGGCGTGCTATCATAAATGATTTGAAATTGAGTGCTGCCACAGACTCCAGTCATGAACAACAATCTGATTTATGTTCGAAAGAAGCCAACGTTCAAGCCAAAGAAATCAGTAGCATACCCTGTGTAGATGTTGATGAAGTTGACACTGACCACTGTTGTAAAAATGCTATTTCTCATTCTCCTCGGTATACAATTGAAGAGAGGCTTGTTATCATAAATGATTTGAAATTGAGTGCTGCCAGAGACTCCAGTCATGAACAACAATCTGATTTGGACAAAGTCAGTAGCATACTTTATGCAGGGGTTGATGCAATGGACCATGATCATTGCAGTGATAGTGCTAGTTTAGATTCCCACCCGGGCACAATGGAAGAGGATCTGGCTACAAAAAAGGATTATGTGGAATTGGATGCTGCTACACAATCCAAATTTTTGAGTCATGAGCAACAGTCTGAATTAGATGACAATGGACGCAGAAAGTTTCTTTCTGAAACAGAGACTGGCGGTTCAGATGCTCCCTCACCTTCCCCCCAGACAAGCCAGTTAGACTGTGACCTTACAGTGTCCCTTTCCAGTAACGACCCAGTTGATGTTATTTCAGATGCTGATGAAAGCACAAGTTCTTTGGGTACTTATGAATTGGGTCATTGCTCGGGCAATTTTGAAATGGATAACATAAATATGACGGTTGTTCTTTATCCGGATTATGTTGTATATGGGGATAGTTATTGTACAGGAGCCCAGCAGTTAATATTCTCTCACAGTTGCATCAAAATCAGTGGTTTAGCACCGTCTGAAAACGACAAAACTTTGAATTTTGAATGGGGAGTTGATGATCTTGTCAATGTTGAGTGTCAGTGGGTTCAAAATGCTGAGTTTGTCATGATAAAACTCCGTGTACTATCAAAGGATGCAGATGGAGATGATGATGCACTTGGTATTTCAGGCATTGAGGAGTTGAAAATTGGAGTTGTTGAACCCAACTGGTCACAGCAACAAGAAAGAATAGCATGTTTGAATGATAAATATTTGGATATATTGGAACCGGTGCAAATCATGGAAGCGGACAATTCACTTGGCCAGAGGCATCATTTTCCAAATTTCGACGAGGATTTTGAAACTGTTGTATATCCGGAGGGGGATCCTGATGCCGTTTCCATCAGTAAGAGAGATGTTGATCTCTTACAGCCAGAGATATTTATTAACGATACATTGATCGACTTCTATATCAAGTATTTGGAAAATCGGATTCAACCCGAGGAAAAGCACAGGTTCTACTTTTTCAATAGTTTTTTCTTTCGAAAGCTGGCTGACCTGGACAAGGATCCATCCAGTGTTCCTGGTGGCAGGGCTGCTTTCCAACGTGTTCGGAAATGGACAAGGAAAGTGGATTTGTTTGAAAAGGATTACATCTTCATCCCTGTAAACTTCAATCTACACTGGACTCTAATTGTTATATGTCATCCTGGTGAAGTGCCTAGATATAAGGGTAAGATATCTGTGAATCGACCTATGCACATAGATTCTACATTAGTCTTCCCATCATTTATGTGCTTTTGTCATGTTTCAGTTGGAGACTCAGGCAAGTCAGTTAAGGTACCTTGTATATTGCACTTGGATTCTCTCAAAGGAAGTCATACAGGTCTCAAAAATCATGTTCAAAGTTATTTGTGGGAAGAGTGGAAAGAAAAGAAAAAGGAGACATCGGAAGAAATCTCATCAAACTTTCACAACCTGCGGTTTCTCTCACTGGAGCTACCACAACAGGAAAATACATATGATTGTGGCCTGTTTTTGCTTCACTATCTAGAGCTGTTTTTGGAAGAAGCTCCTGCTATCTTCAATCCATTCGACATAAACAAGTTCTCCACCTTTCTTAATGCAAATTGGTTTCTTCCTTCCGAGGCTTCTCTCAAGCGCACTCTTATCCAGAGATTAATTTTTGATCTCATTGAAAATCGTTATCGGGAAGTCTGTTTGCCAGCTTGCAGTGATGGAGATCAGTCTAAATATCAGGGATGTAATCAGCTTGAAATAGGTGCAAAGTTTCTTTCTGGAAGATCCAGTCCTGCTATAGCTTGCCAAGAAAATATATCAACTTCTCAAGCAGACCACGGAATCGAAATGACTCTGTTACCCACATCTTCTCTTAGGAGTTCTGAGTGTGTTAGTGATGCAGGCCTGGTTCTCAGGGAATTTTTTCAGTCAGGAGAAACTGCAGGCTCACTATTTGGACAATATCAATCCTTTGAACAGAAATCGCCTTTTTACCATCCTAATGGAGCTACACCACCAGTAGAGGAAGAAACCCAAACTGGGGAGCAGTTTGCCTATCTGGCTACGGGAGACACTGGCTTTCAAGAGATGTCTGCAATCACATCTCAAACTTGTGGTATTCAATGCTCTTCGAAATCTTATGGAGTTGAGACTTCGTATAACTTGGGGGTGTCTGAACAGGCACCAAATGGAAACATTGATGCATCCCCTGACCGATCAGTTTGTGCCTCTGATCTTTCTGAAGGCATAGAGATCATTGAAAATGGTTCAGTTAGAGAAGATTTAGGTCCAGGCCAGAAAGAAGAAATGGATGTACAAAATTATCCATCATTGGACAGTGTCACGTGTGTGGTAGATGGCCTTGTTTCTGGTTTGGGTGAGGTGCAGAGCGGATCCTTGATTGAAGAAGGTTCTCAGGATCATGAAGGGTTGCATGACGGACTTGAAAATGGAGGTCCAAGTCGGAAAGAAGAAAGGGATGTACAGACCCATTCATCAACAGAAGATGTCTTGTGTCTAGCAGATGGCCTTGTATCTGGTTCAGGCAATATGCAGAGCACTTCTGTTACTGAAGAAAGTTCTCTGGACCAAAAAAAGGTGCATGTTGGAAATGAAAATAGTGGTTCACTTCCCTCATCCCAAGAAATTTCTGATATACCCGTTCTTGAAGATGTTGACATGGTAGGCAATGGTACAATCTCATGTGATAATGGTTTGGTGGGCGAGTCACAGGAGCCAGAGTCTGAAGAGCAACGAGCTGCAAAAAGAATGAGGCTTACACCTCCAGTTGAAGGGGAAAAATGTCTCACATGA

Protein Analysis

1255

Amino Acids

138.99

Weight (kDa)

4.53

Isoelectric Point (pI)

49.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PH_ULP PF25352 454 - 572 4.5e-43 Ubiquitin-like protease PH domain
Peptidase_C48 PF02902 627 - 852 9.8e-35 Ulp1 protease family, C-terminal catalytic domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 74
Acc36I ACCTGC 1 cut(s) 2421
Acc65I GGTACC 1 cut(s) 2275
AccB1I GGYRCC 2 cut(s) 2275, 3136
AccBSI CCGCTC 1 cut(s) 3345
AccI GTMKAC 5 cut(s) 36, 266, 464, 665, 866
AccII CGCG 2 cut(s) 19, 111
AccIII TCCGGA 2 cut(s) 1378, 1810
AciI CCGC 8 cut(s) 14, 17, 19, 109, 1182, 1742, 2416, 3345
AclI AACGTT 4 cut(s) 168, 366, 567, 768
AclWI GGATC 9 cut(s) 1062, 1814, 1827, 1997, 2010, 2733, 3342, 3355, 3381
AcoI YGGCCR 1 cut(s) 1756
AcsI RAATTY 7 cut(s) 80, 124, 1106, 1492, 1777, 2873, 3600
AcuI CTGAAG 3 cut(s) 3216, 3546, 3720
AcvI CACGTG 1 cut(s) 3300
AfaI GTAC 7 cut(s) 1309, 1411, 1578, 2277, 3270, 3438, 3649
AfiI CCNNNNNNNGG 9 cut(s) 23, 70, 401, 602, 1999, 2994, 2995, 3550, 3746
AflIII ACRYGT 2 cut(s) 2041, 3299
AgeI ACCGGT 1 cut(s) 1723
AjnI CCWGG 6 cut(s) 148, 1992, 2017, 2143, 2859, 3244
AleI CACNNNNGTG 1 cut(s) 3302
AluBI AGCT 9 cut(s) 1984, 2434, 2491, 2507, 2663, 2707, 2756, 2963, 3713
AluI AGCT 9 cut(s) 1984, 2434, 2491, 2507, 2663, 2707, 2756, 2963, 3713
Alw21I GWGCWC 1 cut(s) 3515
Alw26I GTCTC 8 cut(s) 915, 1169, 2247, 2327, 2372, 3018, 3098, 3764
AlwI GGATC 9 cut(s) 1062, 1814, 1827, 1997, 2010, 2733, 3342, 3355, 3381
AlwNI CAGNNNCTG 3 cut(s) 1178, 1283, 3698
Ama87I CYCGRG 3 cut(s) 1036, 1330, 1934
Aor13HI TCCGGA 2 cut(s) 1378, 1810
AoxI GGCC 7 cut(s) 25, 1756, 2464, 2857, 3247, 3313, 3481
ApeKI GCWGC 7 cut(s) 314, 512, 713, 914, 1091, 2030, 3713
ApoI RAATTY 7 cut(s) 80, 124, 1106, 1492, 1777, 2873, 3600
ArsI GACNNNNNNTTYG 2 cut(s) 1775, 1807
AseI ATTAAT 1 cut(s) 2615
AsiGI ACCGGT 1 cut(s) 1723
Asp700I GAANNNNTTC 1 cut(s) 2877
Asp718I GGTACC 1 cut(s) 2275
AspLEI GCGC 2 cut(s) 11, 2598
AspS9I GGNCC 6 cut(s) 67, 115, 994, 3242, 3410, 3541
AsuC2I CCSGG 4 cut(s) 65, 71, 1037, 1038
AsuHPI GGTGA 3 cut(s) 1191, 2159, 3344
AsuII TTCGAA 5 cut(s) 128, 155, 755, 1978, 3086
AvaI CYCGRG 3 cut(s) 1036, 1330, 1934
AvaII GGWCC 6 cut(s) 67, 115, 994, 3242, 3410, 3541
BaeGI GKGCMC 1 cut(s) 1043
BalI TGGCCA 1 cut(s) 1758
BamHI GGATCC 3 cut(s) 1819, 2002, 3347
BanI GGYRCC 2 cut(s) 2275, 3136
BanII GRGCYC 1 cut(s) 1420
BbrPI CACGTG 1 cut(s) 3300
BbsI GAAGAC 1 cut(s) 2206
Bbv12I GWGCWC 1 cut(s) 3515
BbvI GCAGC 7 cut(s) 301, 499, 700, 901, 1078, 2017, 3700
BceAI ACGGC 1 cut(s) 1814
BciT130I CCWGG 6 cut(s) 150, 1994, 2019, 2145, 2861, 3246
BclI TGATCA 1 cut(s) 1000
BcnI CCSGG 4 cut(s) 65, 71, 1037, 1038
BcoDI GTCTC 8 cut(s) 915, 1169, 2247, 2327, 2372, 3018, 3098, 3764
BfaI CTAG 5 cut(s) 105, 1020, 2157, 2486, 3473
BfmI CTRYAG 2 cut(s) 2751, 2895
BfuAI ACCTGC 1 cut(s) 2421
BglI GCCNNNNNGGC 1 cut(s) 3014
BisI GCNGC 9 cut(s) 17, 109, 315, 513, 714, 915, 1092, 2031, 3714
BlsI GCNGC 9 cut(s) 18, 110, 316, 514, 715, 916, 1093, 2032, 3715
Bme18I GGWCC 6 cut(s) 67, 115, 994, 3242, 3410, 3541
BmeT110I CYCGRG 3 cut(s) 1036, 1330, 1934
BmgT120I GGNCC 6 cut(s) 67, 115, 994, 3242, 3410, 3541
BmiI GGNNCC 9 cut(s) 69, 1417, 1722, 1821, 2004, 2277, 3138, 3349, 3690
BmrI ACTGGG 2 cut(s) 1256, 3003
BmuI ACTGGG 2 cut(s) 1256, 3003
BoxI GACNNNNGTC 4 cut(s) 327, 525, 726, 927
BpiI GAAGAC 1 cut(s) 2206
BpmI CTGGAG 6 cut(s) 310, 508, 709, 910, 2450, 3723
Bpu14I TTCGAA 5 cut(s) 128, 155, 755, 1978, 3086
BpuEI CTTGAG 2 cut(s) 2576, 2766
BpuMI CCSGG 4 cut(s) 65, 71, 1037, 1038
BsaAI YACGTR 1 cut(s) 3300
BsaBI GATNNNNATC 2 cut(s) 1854, 2676
BsaI GGTCTC 1 cut(s) 2327
BsaJI CCNNGG 7 cut(s) 17, 260, 860, 1036, 1935, 2580, 2791
BsaWI WCCGGW 3 cut(s) 1378, 1723, 1810
BsaXI ACNNNNNCTCC 4 cut(s) 2528, 2558, 3680, 3710
Bsc4I CCNNNNNNNGG 9 cut(s) 23, 70, 401, 602, 1999, 2994, 2995, 3550, 3746
Bse118I RCCGGY 1 cut(s) 1723
Bse3DI GCAATG 4 cut(s) 996, 1003, 1324, 3649
Bse8I GATNNNNATC 2 cut(s) 1854, 2676
BseAI TCCGGA 2 cut(s) 1378, 1810
BseBI CCWGG 6 cut(s) 150, 1994, 2019, 2145, 2861, 3246
BseDI CCNNGG 7 cut(s) 17, 260, 860, 1036, 1935, 2580, 2791
BseJI GATNNNNATC 2 cut(s) 1854, 2676
BseLI CCNNNNNNNGG 9 cut(s) 23, 70, 401, 602, 1999, 2994, 2995, 3550, 3746
BseMI GCAATG 4 cut(s) 996, 1003, 1324, 3649
BseMII CTCAG 6 cut(s) 322, 1542, 2271, 2829, 2881, 3383
BseRI GAGGAG 5 cut(s) 249, 447, 648, 849, 1646
BseSI GKGCMC 1 cut(s) 1043
BseXI GCAGC 7 cut(s) 301, 499, 700, 901, 1078, 2017, 3700
BseYI CCCAGC 1 cut(s) 1419
BsgI GTGCAG 1 cut(s) 3359
Bsh1236I CGCG 2 cut(s) 19, 111
Bsh1285I CGRYCG 1 cut(s) 75
BshFI GGCC 7 cut(s) 27, 1758, 2466, 2859, 3249, 3315, 3483
BshNI GGYRCC 2 cut(s) 2275, 3136
BshTI ACCGGT 1 cut(s) 1723
BsiEI CGRYCG 1 cut(s) 75
BsiHKAI GWGCWC 1 cut(s) 3515
BsiHKCI CYCGRG 3 cut(s) 1036, 1330, 1934
BsiSI CCGG 7 cut(s) 65, 71, 87, 1037, 1379, 1724, 1811
BslFI GGGAC 1 cut(s) 1228
BslI CCNNNNNNNGG 9 cut(s) 23, 70, 401, 602, 1999, 2994, 2995, 3550, 3746
BsmAI GTCTC 8 cut(s) 915, 1169, 2247, 2327, 2372, 3018, 3098, 3764
BsmFI GGGAC 1 cut(s) 1228
BsnI GGCC 7 cut(s) 27, 1758, 2466, 2859, 3249, 3315, 3483
Bso31I GGTCTC 1 cut(s) 2327
BsoBI CYCGRG 3 cut(s) 1036, 1330, 1934
Bsp119I TTCGAA 5 cut(s) 128, 155, 755, 1978, 3086
Bsp1286I GDGCHC 3 cut(s) 1043, 1420, 3515
Bsp13I TCCGGA 2 cut(s) 1378, 1810
Bsp1407I TGTACA 3 cut(s) 1409, 3268, 3436
BspACI CCGC 8 cut(s) 14, 17, 19, 109, 1182, 1742, 2416, 3345
BspANI GGCC 7 cut(s) 27, 1758, 2466, 2859, 3249, 3315, 3483
BspCNI CTCAG 6 cut(s) 321, 1543, 2270, 2830, 2880, 3382
BspEI TCCGGA 2 cut(s) 1378, 1810
BspFNI CGCG 2 cut(s) 19, 111
BspHI TCATGA 7 cut(s) 331, 529, 730, 931, 1117, 1560, 3376
BspLI GGNNCC 9 cut(s) 69, 1417, 1722, 1821, 2004, 2277, 3138, 3349, 3690
BspMAI CTGCAG 1 cut(s) 2899
BspMI ACCTGC 1 cut(s) 2421
BspPI GGATC 9 cut(s) 1062, 1814, 1827, 1997, 2010, 2733, 3342, 3355, 3381
BspQI GCTCTTC 2 cut(s) 3088, 3696
BspT104I TTCGAA 5 cut(s) 128, 155, 755, 1978, 3086
BspT107I GGYRCC 2 cut(s) 2275, 3136
BspTNI GGTCTC 1 cut(s) 2327
BsrBI CCGCTC 1 cut(s) 3345
BsrDI GCAATG 4 cut(s) 996, 1003, 1324, 3649
BsrFI RCCGGY 1 cut(s) 1723
BsrGI TGTACA 3 cut(s) 1409, 3268, 3436
BssAI RCCGGY 1 cut(s) 1723
BssECI CCNNGG 7 cut(s) 17, 260, 860, 1036, 1935, 2580, 2791
BssNAI GTATAC 4 cut(s) 267, 465, 666, 867
Bst1107I GTATAC 4 cut(s) 267, 465, 666, 867
Bst2UI CCWGG 6 cut(s) 150, 1994, 2019, 2145, 2861, 3246
Bst6I CTCTTC 9 cut(s) 45, 270, 468, 669, 870, 1044, 2349, 3088, 3696
BstAUI TGTACA 3 cut(s) 1409, 3268, 3436
BstBAI YACGTR 1 cut(s) 3300
BstBI TTCGAA 5 cut(s) 128, 155, 755, 1978, 3086
BstC8I GCNNGC 9 cut(s) 285, 483, 684, 1986, 2661, 2665, 2758, 2857, 2899
BstDEI CTNAG 7 cut(s) 308, 1551, 2257, 2828, 2838, 2867, 3369
BstDSI CCRYGG 2 cut(s) 17, 2791
BstENI CCTNNNNNAGG 3 cut(s) 399, 600, 1997
BstFNI CGCG 2 cut(s) 19, 111
BstHHI GCGC 2 cut(s) 11, 2598
BstMAI GTCTC 8 cut(s) 915, 1169, 2247, 2327, 2372, 3018, 3098, 3764
BstMCI CGRYCG 1 cut(s) 75
BstMWI GCNNNNNNNGC 1 cut(s) 3014
BstNI CCWGG 6 cut(s) 150, 1994, 2019, 2145, 2861, 3246
BstNSI RCATGY 2 cut(s) 1692, 3560
BstPAI GACNNNNGTC 4 cut(s) 327, 525, 726, 927
BstSFI CTRYAG 2 cut(s) 2751, 2895
BstSLI GKGCMC 1 cut(s) 1043
BstUI CGCG 2 cut(s) 19, 111
BstV1I GCAGC 7 cut(s) 301, 499, 700, 901, 1078, 2017, 3700
BstV2I GAAGAC 1 cut(s) 2206
BstX2I RGATCY 5 cut(s) 1054, 1819, 2002, 2738, 3347
BstXI CCANNNNNNTGG 1 cut(s) 2957
BstYI RGATCY 5 cut(s) 1054, 1819, 2002, 2738, 3347
BstZ17I GTATAC 4 cut(s) 267, 465, 666, 867
BsuRI GGCC 7 cut(s) 27, 1758, 2466, 2859, 3249, 3315, 3483
BtgI CCRYGG 2 cut(s) 17, 2791
BtsI GCAGTG 2 cut(s) 1015, 2674
BveI ACCTGC 1 cut(s) 2421
Cac8I GCNNGC 9 cut(s) 285, 483, 684, 1986, 2661, 2665, 2758, 2857, 2899
CaiI CAGNNNCTG 3 cut(s) 1178, 1283, 3698
CciI TCATGA 7 cut(s) 331, 529, 730, 931, 1117, 1560, 3376
CfoI GCGC 2 cut(s) 11, 2598
Cfr10I RCCGGY 1 cut(s) 1723
Cfr13I GGNCC 6 cut(s) 67, 115, 994, 3242, 3410, 3541
Cfr42I CCGCGG 1 cut(s) 20
Cfr9I CCCGGG 1 cut(s) 1036
CseI GACGC 1 cut(s) 1158
CsiI ACCWGGT 1 cut(s) 148
Csp6I GTAC 7 cut(s) 1308, 1410, 1577, 2276, 3269, 3437, 3648
CspAI ACCGGT 1 cut(s) 1723
CspCI CAANNNNNGTGG 4 cut(s) 1438, 1473, 2046, 2081
CviQI GTAC 7 cut(s) 1308, 1410, 1577, 2276, 3269, 3437, 3648
DdeI CTNAG 7 cut(s) 308, 1551, 2257, 2828, 2838, 2867, 3369
DrdI GACNNNNNNGTC 1 cut(s) 74
DseDI GACNNNNNNGTC 1 cut(s) 74
EaeI YGGCCR 1 cut(s) 1756
Eam1104I CTCTTC 9 cut(s) 45, 270, 468, 669, 870, 1044, 2349, 3088, 3696
EarI CTCTTC 9 cut(s) 45, 270, 468, 669, 870, 1044, 2349, 3088, 3696
Eco147I AGGCCT 2 cut(s) 27, 2859
Eco24I GRGCYC 1 cut(s) 1420
Eco31I GGTCTC 1 cut(s) 2327
Eco32I GATATC 1 cut(s) 2175
Eco47I GGWCC 6 cut(s) 67, 115, 994, 3242, 3410, 3541
Eco57I CTGAAG 3 cut(s) 3216, 3546, 3720
Eco72I CACGTG 1 cut(s) 3300
Eco88I CYCGRG 3 cut(s) 1036, 1330, 1934
EcoNI CCTNNNNNAGG 3 cut(s) 399, 600, 1997
EcoRI GAATTC 1 cut(s) 124
EcoRII CCWGG 6 cut(s) 148, 1992, 2017, 2143, 2859, 3244
EcoRV GATATC 1 cut(s) 2175
EcoT22I ATGCAT 1 cut(s) 3160
EcoT38I GRGCYC 1 cut(s) 1420
FalI AAGNNNNNCTT 4 cut(s) 267, 299, 867, 899
FaqI GGGAC 1 cut(s) 1228
FauNDI CATATG 1 cut(s) 2455
FbaI TGATCA 1 cut(s) 1000
FblI GTMKAC 5 cut(s) 36, 266, 464, 665, 866
Fnu4HI GCNGC 9 cut(s) 17, 109, 315, 513, 714, 915, 1092, 2031, 3714
FriOI GRGCYC 1 cut(s) 1420
Fsp4HI GCNGC 9 cut(s) 17, 109, 315, 513, 714, 915, 1092, 2031, 3714
FspBI CTAG 5 cut(s) 105, 1020, 2157, 2486, 3473
GlaI GCGC 2 cut(s) 10, 2597
GluI GCNGC 9 cut(s) 17, 109, 315, 513, 714, 915, 1092, 2031, 3714
GsaI CCCAGC 1 cut(s) 1423
GsuI CTGGAG 6 cut(s) 310, 508, 709, 910, 2450, 3723
HaeIII GGCC 7 cut(s) 27, 1758, 2466, 2859, 3249, 3315, 3483
HapII CCGG 7 cut(s) 65, 71, 87, 1037, 1379, 1724, 1811
HgaI GACGC 1 cut(s) 1158
HhaI GCGC 2 cut(s) 11, 2598
Hin6I GCGC 2 cut(s) 9, 2596
HinP1I GCGC 2 cut(s) 9, 2596
HincII GTYRAC 5 cut(s) 220, 418, 619, 820, 3631
HindII GTYRAC 5 cut(s) 220, 418, 619, 820, 3631
HpaII CCGG 7 cut(s) 65, 71, 87, 1037, 1379, 1724, 1811
HphI GGTGA 3 cut(s) 1191, 2159, 3344
Hpy99I CGWCG 2 cut(s) 50, 1787
HpyAV CCTTC 7 cut(s) 124, 1212, 2586, 3191, 3356, 3374, 3740
HpyCH4IV ACGT 6 cut(s) 168, 366, 567, 768, 2041, 3299
HpyF10VI GCNNNNNNNGC 1 cut(s) 3014
HpyF3I CTNAG 7 cut(s) 308, 1551, 2257, 2828, 2838, 2867, 3369
HpySE526I ACGT 6 cut(s) 168, 366, 567, 768, 2041, 3299
HspAI GCGC 2 cut(s) 9, 2596
Kpn2I TCCGGA 2 cut(s) 1378, 1810
KpnI GGTACC 1 cut(s) 2279
Ksp22I TGATCA 1 cut(s) 1000
KspI CCGCGG 1 cut(s) 20
LguI GCTCTTC 2 cut(s) 3088, 3696
LmnI GCTCC 7 cut(s) 1198, 1415, 2431, 2512, 2960, 2998, 3688
Lsp1109I GCAGC 7 cut(s) 301, 499, 700, 901, 1078, 2017, 3700
MabI ACCWGGT 1 cut(s) 148
MaeI CTAG 5 cut(s) 105, 1020, 2157, 2486, 3473
MaeII ACGT 6 cut(s) 168, 366, 567, 768, 2041, 3299
MaeIII GTNAC 7 cut(s) 1229, 1253, 1665, 2811, 3295, 3520, 3681
MbiI CCGCTC 1 cut(s) 3345
MfeI CAATTG 4 cut(s) 270, 468, 669, 870
MflI RGATCY 5 cut(s) 1054, 1819, 2002, 2738, 3347
MhlI GDGCHC 3 cut(s) 1043, 1420, 3515
MlsI TGGCCA 1 cut(s) 1758
MluNI TGGCCA 1 cut(s) 1758
MmeI TCCRAC 5 cut(s) 169, 2062, 2230, 3398, 3541
Mox20I TGGCCA 1 cut(s) 1758
Mph1103I ATGCAT 1 cut(s) 3160
MroI TCCGGA 2 cut(s) 1378, 1810
MroXI GAANNNNTTC 1 cut(s) 2877
MscI TGGCCA 1 cut(s) 1758
MseI TTAA 5 cut(s) 1427, 1881, 2271, 2556, 2615
MslI CAYNNNNRTG 6 cut(s) 1008, 1358, 2145, 2227, 2955, 3302
Msp20I TGGCCA 1 cut(s) 1758
MspA1I CMGCKG 1 cut(s) 19
MspI CCGG 7 cut(s) 65, 71, 87, 1037, 1379, 1724, 1811
MunI CAATTG 4 cut(s) 270, 468, 669, 870
MvaI CCWGG 6 cut(s) 150, 1994, 2019, 2145, 2861, 3246
MvnI CGCG 2 cut(s) 19, 111
MwoI GCNNNNNNNGC 1 cut(s) 3014
NciI CCSGG 4 cut(s) 65, 71, 1037, 1038
NdeI CATATG 1 cut(s) 2455
NlaIV GGNNCC 9 cut(s) 69, 1417, 1722, 1821, 2004, 2277, 3138, 3349, 3690
NmuCI GTSAC 4 cut(s) 1229, 1665, 3295, 3681
NsiI ATGCAT 1 cut(s) 3160
NspI RCATGY 2 cut(s) 1692, 3560
NspV TTCGAA 5 cut(s) 128, 155, 755, 1978, 3086
OliI CACNNNNGTG 1 cut(s) 3302
PagI TCATGA 7 cut(s) 331, 529, 730, 931, 1117, 1560, 3376
PceI AGGCCT 2 cut(s) 27, 2859
PciSI GCTCTTC 2 cut(s) 3088, 3696
PcsI WCGNNNNNNNCGW 3 cut(s) 36, 45, 54
PdmI GAANNNNTTC 1 cut(s) 2877
PfeI GAWTC 6 cut(s) 1028, 1927, 2182, 2201, 2297, 2796
PflFI GACNNNGTC 3 cut(s) 71, 956, 3293
PfoI TCCNGGA 1 cut(s) 63
PinAI ACCGGT 1 cut(s) 1723
PkrI GCNGC 9 cut(s) 18, 110, 316, 514, 715, 916, 1093, 2032, 3715
PmaCI CACGTG 1 cut(s) 3300
PmlI CACGTG 1 cut(s) 3300
Ppu21I YACGTR 1 cut(s) 3300
PshAI GACNNNNGTC 4 cut(s) 327, 525, 726, 927
PshBI ATTAAT 1 cut(s) 2615
Psp1406I AACGTT 4 cut(s) 168, 366, 567, 768
Psp6I CCWGG 6 cut(s) 148, 1992, 2017, 2143, 2859, 3244
PspCI CACGTG 1 cut(s) 3300
PspFI CCCAGC 1 cut(s) 1419
PspGI CCWGG 6 cut(s) 148, 1992, 2017, 2143, 2859, 3244
PspN4I GGNNCC 9 cut(s) 69, 1417, 1722, 1821, 2004, 2277, 3138, 3349, 3690
PspPI GGNCC 6 cut(s) 67, 115, 994, 3242, 3410, 3541
PstI CTGCAG 1 cut(s) 2899
PstNI CAGNNNCTG 3 cut(s) 1178, 1283, 3698
PsuI RGATCY 5 cut(s) 1054, 1819, 2002, 2738, 3347
PsyI GACNNNGTC 3 cut(s) 71, 956, 3293
RsaI GTAC 7 cut(s) 1309, 1411, 1578, 2277, 3270, 3438, 3649
RsaNI GTAC 7 cut(s) 1308, 1410, 1577, 2276, 3269, 3437, 3648
RseI CAYNNNNRTG 6 cut(s) 1008, 1358, 2145, 2227, 2955, 3302
SacII CCGCGG 1 cut(s) 20
SapI GCTCTTC 2 cut(s) 3088, 3696
SaqAI TTAA 5 cut(s) 1427, 1881, 2271, 2556, 2615
SatI GCNGC 9 cut(s) 17, 109, 315, 513, 714, 915, 1092, 2031, 3714
Sau96I GGNCC 6 cut(s) 67, 115, 994, 3242, 3410, 3541
SduI GDGCHC 3 cut(s) 1043, 1420, 3515
SexAI ACCWGGT 1 cut(s) 148
SfcI CTRYAG 2 cut(s) 2751, 2895
Sfr303I CCGCGG 1 cut(s) 20
SfuI TTCGAA 5 cut(s) 128, 155, 755, 1978, 3086
SgrBI CCGCGG 1 cut(s) 20
SinI GGWCC 6 cut(s) 67, 115, 994, 3242, 3410, 3541
SmaI CCCGGG 1 cut(s) 1038
SmiMI CAYNNNNRTG 6 cut(s) 1008, 1358, 2145, 2227, 2955, 3302
SmlI CTYRAG 2 cut(s) 2591, 2781
SmoI CTYRAG 2 cut(s) 2591, 2781
SseBI AGGCCT 2 cut(s) 27, 2859
SsiI CCGC 8 cut(s) 14, 17, 19, 109, 1182, 1742, 2416, 3345
SspI AATATT 2 cut(s) 1431, 1706
SspMI CTAG 5 cut(s) 105, 1020, 2157, 2486, 3473
StuI AGGCCT 2 cut(s) 27, 2859
TaiI ACGT 6 cut(s) 171, 369, 570, 771, 2044, 3302
TaqII GACCGA 1 cut(s) 3183
TatI WGTACW 4 cut(s) 1409, 1576, 3268, 3436
TauI GCSGC 2 cut(s) 19, 111
TfiI GAWTC 6 cut(s) 1028, 1927, 2182, 2201, 2297, 2796
Tru1I TTAA 5 cut(s) 1427, 1881, 2271, 2556, 2615
Tru9I TTAA 5 cut(s) 1427, 1881, 2271, 2556, 2615
TseFI GTSAC 4 cut(s) 1229, 1665, 3295, 3681
TseI GCWGC 7 cut(s) 314, 512, 713, 914, 1091, 2030, 3713
Tsp45I GTSAC 4 cut(s) 1229, 1665, 3295, 3681
TspGWI ACGGA 3 cut(s) 1562, 2808, 3408
TspMI CCCGGG 1 cut(s) 1036
Tth111I GACNNNGTC 3 cut(s) 71, 956, 3293
VpaK11BI GGWCC 6 cut(s) 67, 115, 994, 3242, 3410, 3541
VspI ATTAAT 1 cut(s) 2615
XagI CCTNNNNNAGG 3 cut(s) 399, 600, 1997
XapI RAATTY 7 cut(s) 80, 124, 1106, 1492, 1777, 2873, 3600
XbaI TCTAGA 1 cut(s) 2485
XceI RCATGY 2 cut(s) 1692, 3560
XmaI CCCGGG 1 cut(s) 1036
XmiI GTMKAC 5 cut(s) 36, 266, 464, 665, 866
XmnI GAANNNNTTC 1 cut(s) 2877
XspI CTAG 5 cut(s) 105, 1020, 2157, 2486, 3473
Zsp2I ATGCAT 1 cut(s) 3160
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.