Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0002627

Physical Location & Seq

Genomic Coordinates Reverse (-)

29529814 .. 29531980

Gene Structure 2167 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0298800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2025 bp

ATGAAGATGAAGATGCAGATGATGCTGTTAATGGTAATGGTGGTCTCTCTTCTAGTTGCAGTCGTGCATGGGCAGCAGAGCTACTTGGAAAACAACCAGCTCGACTGCGACAACGACTCCAACATCACCGCCGGCTACATCTGCAACGGCGCCGCTCCCTCATGCGCCTCCTACGTCACTTTCCTCACCATCAGCCACTACAACACCCCCACCTCAATCTCCTCCCTCCTCGGCTCCACCCCCTCCGACATCGCCGCCGCCAACAACATCTCCGACGTCGACCCCATCCCCACCGACACCTCCGTCCTCGTCCCCCTCAACTGCTCCTGCTCCGGCCCCTACTCCCAGCACAACGTCTCCTACACCCTGAAGCCCGACGACACCTACTTCGTCATCGCCAACAACACCTACCAGGGCCTCACCACCTGTCAGGCCCTCAGGCATCAGAACCCCTACGACCCTCTGAACCTCGAGGGCGGCCTTGTCATAGAGGTGCCGATCAGGTGTGCTTGCCCCACCGCCAAACAGACCGCCGCCGGGATCAAGTACCTGCTGGCCTACCTCATCGACCTGGACGACGATCTCGACAAAATAGCCATACGCTTCGCCGTAGATGTACCCACTTTGCTCGAAGCAAACAACTTTAAGACCTCCGACGACGTCATCTATCCCTACCAAGCTGTTCTAGTTCCTCTCACAACCAAACCTTCTCCTCTTCAACTGAAGTATCCAAGCTCTCCTCCACCTCCGCCTTCTCCTCCTCCTCCTCTACCGCCGTCATCACCAGCGCCTCCCTCACCACCAAGTGGGTCTTCCAACAAGAAGTGGGTCTTCATCGGCGTCGGCGTCGGAGCTGGCTGTCTCCTCCTACTTATATCTATCTTCGCCTTCCTCTTCTTCTCAAAACGACGACGCCGTCAGCACCGGCACCACTCTCCCAACCACAAATTAAAGAGCTCCGGTAATAACACGCAGAACTCGCTACCCACCACCACCACCACCACCACCACCTCCAACGACACAACAACATCGTGGTCGCCAATATCCACCAACGGGCTTAAAAACGCAGTGGAGTCTTTGACAGCTTACAAGTTCGAAGACCTGCAGAACGCCACTCAATTCTTCAACGAAGCCAACAGAATCGCCGGCTCCTCCGTCTTCAGAGCTACCTTTGACGGCGAAGATGCTGCCGTCAAGGTGATGACAGGCGACTTGTCCCTCTCCGCCGACGAGATCAACATACTAAAGCGGATCAACCACTCCAACATTATCAGCCTCTCAGGATTCTGCGTCCACAAAGGAAACACATACCTCGTCTACGAGTTTGCTCCTTCTGGCTCACTCATTGATTGTCTTGGGTTGAAGGGCAACATTACTCCTCTGTCATGGAAGCAGAGAGTTCACATTGCTAATGACGTGGCCAATGCGCTCAACTATCTACACAACTTCACACACCCTCCATTAATCCACAAGAACCTGAACACCAGCAACGTTCTCCTGGATGCAAACTTGAGAGCCAAGGTTGCCAATTTCGGTCTGGCAAGAGCTGTGGATTTGGGGAAGGAAGTCGAAGATGGAGGACAGGGATTTCAACTGACGAGACATGTGGTGGGTACACGGGGCTACATGGCGCCGGAGTACATGGAAGACGGGGTGATTACTCCGAAACTGGATGTGTTTGCATTTGGGGTTGTGTTGTTGGAGCTATTGTCCGGAAGACCAGCCTCAGGTGATGAAGAATATACGTTGCTCTATTCATCCATTAGTGGGGTGCTTGAAGGAGATCATGTGGGGGACAAAATTAAAGGGTTTATGGATCCTTCTCTGAGGCGCCAGTATCCTTTGGAGCTGGCGTTTTCAATGGCTCAGCTCGCTAAGAGCTGCGTTGCGCCTCAGATCAACTCACGACCCACCATGGCTCAAGCTTCTGGTACTCTATCTAAGATTCTTTCGTCAACTCTCGACTGGGATTCATCTAAAGCTGTGGATCTTGAACATTCAAGGTCACTGAGTCATGGCAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0006464 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0009987 GO:0016787 GO:0016926 GO:0016929 GO:0018193 GO:0018205 GO:0019538 GO:0019783 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0070011 GO:0070137 GO:0070139 GO:0070646 GO:0070647 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_C48

Protein Analysis

674

Amino Acids

73.08

Weight (kDa)

6.31

Isoelectric Point (pI)

46.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LysM1_NFP_LYK	PF23446	54 - 110	8.6e-17	NFP/LYK LysM1 domain
LysM2_CERK1_LYK3_4_5	PF23472	114 - 168	1.5e-25	LYK3/4/5 LysM2 domain
LysM2_NFP	PF23457	115 - 167	3.8e-08	NFP LysM2 domain
LysM3_LYK4_5	PF23473	183 - 232	6e-12	LYK4/5 LysM3 domain
Pkinase	PF00069	392 - 642	6.1e-35	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	395 - 642	1.4e-33	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002627)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09730 AT1G09730
fragaria_vesca	FvH4_3g25421 FvH4_5g35390 FvH4_5g35390 FvH4_5g35390 FvH4_5g35390
malus_domestica	MD08G1197400.v1.1 MD15G1385000.v1.1
prunus_persica	Prupe.6G149300_v2.0.a1 Prupe.6G149300_v2.0.a1 Prupe.6G149300_v2.0.a1 Prupe.6G149300_v2.0.a1 Prupe.6G149300_v2.0.a1 Prupe.6G149300_v2.0.a1 Prupe.6G149300_v2.0.a1 Prupe.6G149300_v2.0.a1 Prupe.6G149300_v2.0.a1 Prupe.6G149300_v2.0.a1 Prupe.6G149300_v2.0.a1 Prupe.6G149300_v2.0.a1 Prupe.6G149300_v2.0.a1
pyrus_communis	pycom08g16950 pycom08g16970 pycom15g34500
rosa_chinensis	RchiOBHm_Chr7g0236781
rosa_laevigata	RLG00000001062
rosa_multiflora	Rmu_sc0003720.1_g000028
rosa_roxburghii	Rroxscaffold_3G00224860
rosa_rugosa	Rorug07G0298800 Rorug07G0298900 Rorug07G0299000.1 Rorug07G0299100 Rorug07G0299200
rosa_samantha	Rh7AG454400 Rh7BG425600 Rh7CG472900 Rh7DG442100
rosa_wichuraiana	Rw7G037660 Rw7G037720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	302, 915
AatII	GACGTC	2 cut(s)	279, 663
AbsI	CCTCGAGG	1 cut(s)	470
Acc36I	ACCTGC	2 cut(s)	558, 1110
AccB1I	GGYRCC	5 cut(s)	149, 493, 927, 1630, 1830
AccB7I	CCANNNNNTGG	1 cut(s)	806
AccBSI	CCGCTC	1 cut(s)	155
AccI	GTMKAC	2 cut(s)	279, 1317
AccIII	TCCGGA	1 cut(s)	1712
AclI	AACGTT	1 cut(s)	1491
AclWI	GGATC	5 cut(s)	548, 1259, 1811, 1824, 1995
AcoI	YGGCCR	1 cut(s)	1419
AcuI	CTGAAG	3 cut(s)	389, 743, 1144
AcyI	GRCGYC	8 cut(s)	150, 276, 660, 840, 846, 913, 1631, 1831
AdeI	CACNNNGTG	1 cut(s)	806
AfaI	GTAC	5 cut(s)	548, 618, 1615, 1640, 1933
AfiI	CCNNNNNNNGG	5 cut(s)	537, 806, 1053, 1727, 1767
AflIII	ACRYGT	1 cut(s)	1603
AgsI	TTSAA	8 cut(s)	719, 1126, 1363, 1592, 1778, 1860, 1994, 2001
AjiI	CACGTC	1 cut(s)	1417
AjnI	CCWGG	3 cut(s)	411, 570, 1497
AjuI	GAANNNNNNNTTGG	2 cut(s)	796, 828
Alw21I	GWGCWC	1 cut(s)	959
Alw26I	GTCTC	4 cut(s)	49, 361, 866, 1594
AlwI	GGATC	5 cut(s)	548, 1259, 1811, 1824, 1995
Ama87I	CYCGRG	1 cut(s)	470
Aor13HI	TCCGGA	1 cut(s)	1712
AoxI	GGCC	6 cut(s)	334, 415, 432, 478, 555, 1419
ApeKI	GCWGC	3 cut(s)	73, 1187, 1881
ArsI	GACNNNNNNTTYG	2 cut(s)	371, 403
AseI	ATTAAT	1 cut(s)	1463
AspLEI	GCGC	7 cut(s)	152, 167, 790, 1429, 1633, 1833, 1891
AspS9I	GGNCC	3 cut(s)	335, 415, 433
AsuC2I	CCSGG	1 cut(s)	538
AsuHPI	GGTGA	8 cut(s)	118, 178, 412, 774, 789, 1210, 1666, 1742
AsuII	TTCGAA	1 cut(s)	1095
AvaI	CYCGRG	1 cut(s)	470
AxyI	CCTNAGG	2 cut(s)	437, 1726
BaeI	ACNNNNGTAYC	2 cut(s)	710, 743
BalI	TGGCCA	1 cut(s)	1421
BamHI	GGATCC	1 cut(s)	1816
BanI	GGYRCC	5 cut(s)	149, 493, 927, 1630, 1830
BanII	GRGCYC	1 cut(s)	959
BbsI	GAAGAC	6 cut(s)	804, 823, 1104, 1150, 1653, 1723
Bbv12I	GWGCWC	1 cut(s)	959
BbvI	GCAGC	3 cut(s)	85, 1174, 1868
BccI	CCATC	3 cut(s)	197, 293, 1568
BceAI	ACGGC	6 cut(s)	163, 593, 760, 900, 1175, 1192
BcgI	CGANNNNNNTGC	2 cut(s)	1169, 1203
BciT130I	CCWGG	3 cut(s)	413, 572, 1499
BciVI	GTATCC	2 cut(s)	738, 1848
BcnI	CCSGG	1 cut(s)	538
BcoDI	GTCTC	4 cut(s)	49, 361, 866, 1594
BfaI	CTAG	2 cut(s)	53, 686
BfmI	CTRYAG	1 cut(s)	1103
BfoI	RGCGCY	4 cut(s)	153, 791, 1634, 1834
BfuAI	ACCTGC	2 cut(s)	558, 1110
BfuI	GTATCC	2 cut(s)	738, 1848
BisI	GCNGC	8 cut(s)	74, 153, 255, 258, 478, 534, 1188, 1882
BlpI	GCTNAGC	1 cut(s)	1866
BlsI	GCNGC	8 cut(s)	75, 154, 256, 259, 479, 535, 1189, 1883
Bme1390I	CCNGG	4 cut(s)	413, 538, 572, 1499
BmeT110I	CYCGRG	1 cut(s)	470
BmgBI	CACGTC	1 cut(s)	1417
BmgT120I	GGNCC	3 cut(s)	335, 415, 433
BmiI	GGNNCC	9 cut(s)	151, 235, 337, 495, 929, 1150, 1632, 1818, 1832
BmrFI	CCNGG	4 cut(s)	413, 538, 572, 1499
BmrI	ACTGGG	1 cut(s)	1975
BmsI	GCATC	5 cut(s)	3, 12, 451, 1174, 1492
BmuI	ACTGGG	1 cut(s)	1975
BpiI	GAAGAC	6 cut(s)	804, 823, 1104, 1150, 1653, 1723
Bpu1102I	GCTNAGC	1 cut(s)	1866
Bpu14I	TTCGAA	1 cut(s)	1095
BpuEI	CTTGAG	2 cut(s)	1531, 1905
BpuMI	CCSGG	1 cut(s)	538
BsaHI	GRCGYC	8 cut(s)	150, 276, 660, 840, 846, 913, 1631, 1831
BsaI	GGTCTC	1 cut(s)	49
BsaJI	CCNNGG	4 cut(s)	229, 412, 1518, 1914
BsaWI	WCCGGW	2 cut(s)	959, 1712
Bsc4I	CCNNNNNNNGG	5 cut(s)	537, 806, 1053, 1727, 1767
Bse118I	RCCGGY	3 cut(s)	131, 924, 1145
Bse1I	ACTGG	3 cut(s)	1674, 1834, 1970
Bse21I	CCTNAGG	2 cut(s)	437, 1726
Bse3DI	GCAATG	1 cut(s)	1404
BseAI	TCCGGA	1 cut(s)	1712
BseBI	CCWGG	3 cut(s)	413, 572, 1499
BseDI	CCNNGG	4 cut(s)	229, 412, 1518, 1914
BseGI	GGATG	4 cut(s)	285, 1507, 1678, 1757
BseLI	CCNNNNNNNGG	5 cut(s)	537, 806, 1053, 1727, 1767
BseMI	GCAATG	1 cut(s)	1404
BseMII	CTCAG	7 cut(s)	451, 1293, 1740, 1817, 1880, 1907, 2000
BseNI	ACTGG	3 cut(s)	1674, 1834, 1970
BseXI	GCAGC	3 cut(s)	85, 1174, 1868
BseYI	CCCAGC	1 cut(s)	345
BshFI	GGCC	6 cut(s)	336, 417, 434, 480, 557, 1421
BshNI	GGYRCC	5 cut(s)	149, 493, 927, 1630, 1830
BsiHKAI	GWGCWC	1 cut(s)	959
BsiHKCI	CYCGRG	1 cut(s)	470
BsiSI	CCGG	8 cut(s)	132, 333, 537, 925, 960, 1146, 1634, 1713
BslFI	GGGAC	3 cut(s)	296, 1201, 1808
BslI	CCNNNNNNNGG	5 cut(s)	537, 806, 1053, 1727, 1767
BsmAI	GTCTC	4 cut(s)	49, 361, 866, 1594
BsmBI	CGTCTC	1 cut(s)	361
BsmFI	GGGAC	3 cut(s)	296, 1201, 1808
BsnI	GGCC	6 cut(s)	336, 417, 434, 480, 557, 1421
Bso31I	GGTCTC	1 cut(s)	49
BsoBI	CYCGRG	1 cut(s)	470
Bsp119I	TTCGAA	1 cut(s)	1095
Bsp1286I	GDGCHC	1 cut(s)	959
Bsp13I	TCCGGA	1 cut(s)	1712
Bsp143I	GATC	9 cut(s)	498, 540, 580, 1233, 1251, 1783, 1816, 1896, 1987
Bsp1720I	GCTNAGC	1 cut(s)	1866
Bsp19I	CCATGG	1 cut(s)	1914
BspANI	GGCC	6 cut(s)	336, 417, 434, 480, 557, 1421
BspCNI	CTCAG	7 cut(s)	450, 1292, 1739, 1818, 1879, 1906, 2001
BspEI	TCCGGA	1 cut(s)	1712
BspLI	GGNNCC	9 cut(s)	151, 235, 337, 495, 929, 1150, 1632, 1818, 1832
BspMAI	CTGCAG	1 cut(s)	1107
BspMI	ACCTGC	2 cut(s)	558, 1110
BspPI	GGATC	5 cut(s)	548, 1259, 1811, 1824, 1995
BspT104I	TTCGAA	1 cut(s)	1095
BspT107I	GGYRCC	5 cut(s)	149, 493, 927, 1630, 1830
BspTNI	GGTCTC	1 cut(s)	49
BsrBI	CCGCTC	1 cut(s)	155
BsrDI	GCAATG	1 cut(s)	1404
BsrFI	RCCGGY	3 cut(s)	131, 924, 1145
BsrI	ACTGG	3 cut(s)	1674, 1834, 1970
BssAI	RCCGGY	3 cut(s)	131, 924, 1145
BssECI	CCNNGG	4 cut(s)	229, 412, 1518, 1914
BssMI	GATC	9 cut(s)	498, 540, 580, 1233, 1251, 1783, 1816, 1896, 1987
BssNI	GRCGYC	8 cut(s)	150, 276, 660, 840, 846, 913, 1631, 1831
BssT1I	CCWWGG	2 cut(s)	1518, 1914
Bst2UI	CCWGG	3 cut(s)	413, 572, 1499
Bst6I	CTCTTC	3 cut(s)	54, 720, 899
BstACI	GRCGYC	8 cut(s)	150, 276, 660, 840, 846, 913, 1631, 1831
BstAPI	GCANNNNNTGC	1 cut(s)	22
BstBI	TTCGAA	1 cut(s)	1095
BstC8I	GCNNGC	7 cut(s)	133, 511, 555, 856, 1147, 1851, 1872
BstDEI	CTNAG	9 cut(s)	437, 1279, 1726, 1826, 1866, 1875, 1893, 1941, 2009
BstDSI	CCRYGG	1 cut(s)	1914
BstF5I	GGATG	4 cut(s)	285, 1507, 1678, 1757
BstH2I	RGCGCY	4 cut(s)	153, 791, 1634, 1834
BstHHI	GCGC	7 cut(s)	152, 167, 790, 1429, 1633, 1833, 1891
BstKTI	GATC	9 cut(s)	501, 543, 583, 1236, 1254, 1786, 1819, 1899, 1990
BstMAI	GTCTC	4 cut(s)	49, 361, 866, 1594
BstMBI	GATC	9 cut(s)	498, 540, 580, 1233, 1251, 1783, 1816, 1896, 1987
BstMWI	GCNNNNNNNGC	6 cut(s)	22, 73, 141, 979, 1523, 1871
BstNI	CCWGG	3 cut(s)	413, 572, 1499
BstNSI	RCATGY	1 cut(s)	1607
BstSCI	CCNGG	4 cut(s)	411, 536, 570, 1497
BstSFI	CTRYAG	1 cut(s)	1103
BstV1I	GCAGC	3 cut(s)	85, 1174, 1868
BstV2I	GAAGAC	6 cut(s)	804, 823, 1104, 1150, 1653, 1723
BstX2I	RGATCY	2 cut(s)	1816, 1987
BstYI	RGATCY	2 cut(s)	1816, 1987
Bsu36I	CCTNAGG	2 cut(s)	437, 1726
BsuI	GTATCC	2 cut(s)	738, 1848
BsuRI	GGCC	6 cut(s)	336, 417, 434, 480, 557, 1421
BtgI	CCRYGG	1 cut(s)	1914
BtgZI	GCGATG	2 cut(s)	235, 379
BtrI	CACGTC	1 cut(s)	1417
BtsCI	GGATG	4 cut(s)	285, 1507, 1678, 1757
BtsI	GCAGTG	1 cut(s)	1074
BtsIMutI	CAGTG	2 cut(s)	1074, 2006
BveI	ACCTGC	2 cut(s)	558, 1110
Cac8I	GCNNGC	7 cut(s)	133, 511, 555, 856, 1147, 1851, 1872
CfoI	GCGC	7 cut(s)	152, 167, 790, 1429, 1633, 1833, 1891
Cfr10I	RCCGGY	3 cut(s)	131, 924, 1145
Cfr13I	GGNCC	3 cut(s)	335, 415, 433
CseI	GACGC	4 cut(s)	829, 835, 921, 1279
Csp6I	GTAC	5 cut(s)	547, 617, 1614, 1639, 1932
CspCI	CAANNNNNGTGG	2 cut(s)	1530, 1565
CviAII	CATG	9 cut(s)	68, 162, 1386, 1604, 1627, 1642, 1787, 1915, 2015
CviQI	GTAC	5 cut(s)	547, 617, 1614, 1639, 1932
DdeI	CTNAG	9 cut(s)	437, 1279, 1726, 1826, 1866, 1875, 1893, 1941, 2009
DinI	GGCGCC	3 cut(s)	151, 1632, 1832
DpnI	GATC	9 cut(s)	500, 542, 582, 1235, 1253, 1785, 1818, 1898, 1989
DpnII	GATC	9 cut(s)	498, 540, 580, 1233, 1251, 1783, 1816, 1896, 1987
DraIII	CACNNNGTG	1 cut(s)	806
DrdI	GACNNNNNNGTC	2 cut(s)	302, 915
DseDI	GACNNNNNNGTC	2 cut(s)	302, 915
EaeI	YGGCCR	1 cut(s)	1419
Eam1104I	CTCTTC	3 cut(s)	54, 720, 899
EarI	CTCTTC	3 cut(s)	54, 720, 899
EciI	GGCGGA	2 cut(s)	738, 1213
Ecl136II	GAGCTC	1 cut(s)	957
Eco130I	CCWWGG	2 cut(s)	1518, 1914
Eco24I	GRGCYC	1 cut(s)	959
Eco31I	GGTCTC	1 cut(s)	49
Eco53kI	GAGCTC	1 cut(s)	957
Eco57I	CTGAAG	3 cut(s)	389, 743, 1144
Eco81I	CCTNAGG	2 cut(s)	437, 1726
Eco88I	CYCGRG	1 cut(s)	470
EcoICRI	GAGCTC	1 cut(s)	957
EcoO109I	RGGNCCY	2 cut(s)	415, 433
EcoRII	CCWGG	3 cut(s)	411, 570, 1497
EcoT14I	CCWWGG	2 cut(s)	1518, 1914
EcoT38I	GRGCYC	1 cut(s)	959
EgeI	GGCGCC	3 cut(s)	151, 1632, 1832
EheI	GGCGCC	3 cut(s)	151, 1632, 1832
ErhI	CCWWGG	2 cut(s)	1518, 1914
Esp3I	CGTCTC	1 cut(s)	361
FaeI	CATG	9 cut(s)	71, 165, 1389, 1607, 1630, 1645, 1790, 1918, 2018
FalI	AAGNNNNNCTT	4 cut(s)	796, 828, 815, 847
FaqI	GGGAC	3 cut(s)	296, 1201, 1808
FatI	CATG	9 cut(s)	67, 161, 1385, 1603, 1626, 1641, 1786, 1914, 2014
FblI	GTMKAC	2 cut(s)	279, 1317
Fnu4HI	GCNGC	8 cut(s)	74, 153, 255, 258, 478, 534, 1188, 1882
FokI	GGATG	4 cut(s)	272, 1514, 1685, 1744
FriOI	GRGCYC	1 cut(s)	959
Fsp4HI	GCNGC	8 cut(s)	74, 153, 255, 258, 478, 534, 1188, 1882
FspBI	CTAG	2 cut(s)	53, 686
GlaI	GCGC	7 cut(s)	151, 166, 789, 1428, 1632, 1832, 1890
GluI	GCNGC	8 cut(s)	74, 153, 255, 258, 478, 534, 1188, 1882
GsaI	CCCAGC	1 cut(s)	349
HaeII	RGCGCY	4 cut(s)	153, 791, 1634, 1834
HaeIII	GGCC	6 cut(s)	336, 417, 434, 480, 557, 1421
HapII	CCGG	8 cut(s)	132, 333, 537, 925, 960, 1146, 1634, 1713
HgaI	GACGC	4 cut(s)	829, 835, 921, 1279
HhaI	GCGC	7 cut(s)	152, 167, 790, 1429, 1633, 1833, 1891
Hin1I	GRCGYC	8 cut(s)	150, 276, 660, 840, 846, 913, 1631, 1831
Hin1II	CATG	9 cut(s)	71, 165, 1389, 1607, 1630, 1645, 1790, 1918, 2018
Hin6I	GCGC	7 cut(s)	150, 165, 788, 1427, 1631, 1831, 1889
HinP1I	GCGC	7 cut(s)	150, 165, 788, 1427, 1631, 1831, 1889
HincII	GTYRAC	2 cut(s)	280, 1956
HindII	GTYRAC	2 cut(s)	280, 1956
HindIII	AAGCTT	1 cut(s)	1923
HinfI	GANTC	7 cut(s)	116, 1073, 1140, 1284, 1945, 1970, 2011
HpaII	CCGG	8 cut(s)	132, 333, 537, 925, 960, 1146, 1634, 1713
HphI	GGTGA	8 cut(s)	118, 178, 412, 774, 789, 1210, 1666, 1742
Hpy166II	GTNNAC	6 cut(s)	280, 1294, 1318, 1402, 1616, 1956
Hpy188III	TCNNGA	6 cut(s)	584, 1281, 1713, 1905, 1961, 1991
Hpy8I	GTNNAC	6 cut(s)	280, 1294, 1318, 1402, 1616, 1956
HpyAV	CCTTC	8 cut(s)	717, 762, 898, 1341, 1357, 1555, 1772, 1830
HpyCH4IV	ACGT	7 cut(s)	174, 276, 354, 660, 1416, 1491, 1745
HpyCH4V	TGCA	7 cut(s)	16, 59, 67, 144, 1105, 1505, 1682
HpyF10VI	GCNNNNNNNGC	6 cut(s)	22, 73, 141, 979, 1523, 1871
HpyF3I	CTNAG	9 cut(s)	437, 1279, 1726, 1826, 1866, 1875, 1893, 1941, 2009
HpySE526I	ACGT	7 cut(s)	174, 276, 354, 660, 1416, 1491, 1745
Hsp92I	GRCGYC	8 cut(s)	150, 276, 660, 840, 846, 913, 1631, 1831
Hsp92II	CATG	9 cut(s)	71, 165, 1389, 1607, 1630, 1645, 1790, 1918, 2018
HspAI	GCGC	7 cut(s)	150, 165, 788, 1427, 1631, 1831, 1889
KasI	GGCGCC	3 cut(s)	149, 1630, 1830
Kpn2I	TCCGGA	1 cut(s)	1712
KroI	GCCGGC	2 cut(s)	131, 1145
KroNI	GCCGGC	2 cut(s)	133, 1147
Kzo9I	GATC	9 cut(s)	498, 540, 580, 1233, 1251, 1783, 1816, 1896, 1987
Lsp1109I	GCAGC	3 cut(s)	85, 1174, 1868
LweI	GCATC	5 cut(s)	3, 12, 451, 1174, 1492
MaeI	CTAG	2 cut(s)	53, 686
MaeII	ACGT	7 cut(s)	174, 276, 354, 660, 1416, 1491, 1745
MaeIII	GTNAC	2 cut(s)	175, 2004
MalI	GATC	9 cut(s)	500, 542, 582, 1235, 1253, 1785, 1818, 1898, 1989
MbiI	CCGCTC	1 cut(s)	155
MboI	GATC	9 cut(s)	498, 540, 580, 1233, 1251, 1783, 1816, 1896, 1987
MflI	RGATCY	2 cut(s)	1816, 1987
MhlI	GDGCHC	1 cut(s)	959
MlsI	TGGCCA	1 cut(s)	1421
MluCI	AATT	4 cut(s)	947, 1118, 1528, 1800
MluNI	TGGCCA	1 cut(s)	1421
Mly113I	GGCGCC	3 cut(s)	150, 1631, 1831
MlyI	GAGTC	3 cut(s)	110, 1082, 2020
MmeI	TCCRAC	9 cut(s)	144, 270, 297, 678, 829, 840, 1038, 1287, 1680
Mox20I	TGGCCA	1 cut(s)	1421
MroI	TCCGGA	1 cut(s)	1712
MroNI	GCCGGC	2 cut(s)	131, 1145
MscI	TGGCCA	1 cut(s)	1421
MseI	TTAA	6 cut(s)	29, 645, 950, 1059, 1463, 1803
MslI	CAYNNNNRTG	1 cut(s)	491
Msp20I	TGGCCA	1 cut(s)	1421
MspI	CCGG	8 cut(s)	132, 333, 537, 925, 960, 1146, 1634, 1713
MspR9I	CCNGG	4 cut(s)	413, 538, 572, 1499
MvaI	CCWGG	3 cut(s)	413, 572, 1499
MwoI	GCNNNNNNNGC	6 cut(s)	22, 73, 141, 979, 1523, 1871
NaeI	GCCGGC	2 cut(s)	133, 1147
NarI	GGCGCC	3 cut(s)	150, 1631, 1831
NciI	CCSGG	1 cut(s)	538
NcoI	CCATGG	1 cut(s)	1914
NdeII	GATC	9 cut(s)	498, 540, 580, 1233, 1251, 1783, 1816, 1896, 1987
NgoMIV	GCCGGC	2 cut(s)	131, 1145
NlaIII	CATG	9 cut(s)	71, 165, 1389, 1607, 1630, 1645, 1790, 1918, 2018
NlaIV	GGNNCC	9 cut(s)	151, 235, 337, 495, 929, 1150, 1632, 1818, 1832
NmeAIII	GCCGAG	1 cut(s)	210
NmuCI	GTSAC	2 cut(s)	175, 2004
NspI	RCATGY	1 cut(s)	1607
NspV	TTCGAA	1 cut(s)	1095
PaeR7I	CTCGAG	1 cut(s)	470
PciI	ACATGT	1 cut(s)	1603
PcsI	WCGNNNNNNNCGW	4 cut(s)	573, 582, 843, 913
PdiI	GCCGGC	2 cut(s)	133, 1147
PfeI	GAWTC	4 cut(s)	1140, 1284, 1945, 1970
PflFI	GACNNNGTC	2 cut(s)	659, 915
PflMI	CCANNNNNTGG	1 cut(s)	806
PfoI	TCCNGGA	1 cut(s)	1497
PkrI	GCNGC	8 cut(s)	75, 154, 256, 259, 479, 535, 1189, 1883
PleI	GAGTC	3 cut(s)	110, 1081, 2019
PluTI	GGCGCC	3 cut(s)	153, 1634, 1834
PpsI	GAGTC	3 cut(s)	110, 1081, 2019
PscI	ACATGT	1 cut(s)	1603
PshBI	ATTAAT	1 cut(s)	1463
Psp124BI	GAGCTC	1 cut(s)	959
Psp1406I	AACGTT	1 cut(s)	1491
Psp6I	CCWGG	3 cut(s)	411, 570, 1497
PspFI	CCCAGC	1 cut(s)	345
PspGI	CCWGG	3 cut(s)	411, 570, 1497
PspN4I	GGNNCC	9 cut(s)	151, 235, 337, 495, 929, 1150, 1632, 1818, 1832
PspPI	GGNCC	3 cut(s)	335, 415, 433
PspXI	VCTCGAGB	1 cut(s)	470
PstI	CTGCAG	1 cut(s)	1107
PsuI	RGATCY	2 cut(s)	1816, 1987
PsyI	GACNNNGTC	2 cut(s)	659, 915
RsaI	GTAC	5 cut(s)	548, 618, 1615, 1640, 1933
RsaNI	GTAC	5 cut(s)	547, 617, 1614, 1639, 1932
RseI	CAYNNNNRTG	1 cut(s)	491
SacI	GAGCTC	1 cut(s)	959
SalI	GTCGAC	1 cut(s)	278
SaqAI	TTAA	6 cut(s)	29, 645, 950, 1059, 1463, 1803
SatI	GCNGC	8 cut(s)	74, 153, 255, 258, 478, 534, 1188, 1882
Sau3AI	GATC	9 cut(s)	498, 540, 580, 1233, 1251, 1783, 1816, 1896, 1987
Sau96I	GGNCC	3 cut(s)	335, 415, 433
SchI	GAGTC	3 cut(s)	110, 1082, 2020
ScrFI	CCNGG	4 cut(s)	413, 538, 572, 1499
SduI	GDGCHC	1 cut(s)	959
SfaNI	GCATC	5 cut(s)	3, 12, 451, 1174, 1492
SfcI	CTRYAG	1 cut(s)	1103
SfoI	GGCGCC	3 cut(s)	151, 1632, 1832
Sfr274I	CTCGAG	1 cut(s)	470
SfuI	TTCGAA	1 cut(s)	1095
SlaI	CTCGAG	1 cut(s)	470
SmiMI	CAYNNNNRTG	1 cut(s)	491
SmlI	CTYRAG	3 cut(s)	470, 1510, 1920
SmoI	CTYRAG	3 cut(s)	470, 1510, 1920
Sse9I	AATT	4 cut(s)	947, 1118, 1528, 1800
SspDI	GGCGCC	3 cut(s)	149, 1630, 1830
SspMI	CTAG	2 cut(s)	53, 686
SstI	GAGCTC	1 cut(s)	959
StyD4I	CCNGG	4 cut(s)	411, 536, 570, 1497
StyI	CCWWGG	2 cut(s)	1518, 1914
TaiI	ACGT	7 cut(s)	177, 279, 357, 663, 1419, 1494, 1748
TaqI	TCGA	9 cut(s)	102, 279, 471, 567, 585, 630, 1095, 1569, 1962
TaqII	GACCGA	1 cut(s)	1523
TasI	AATT	4 cut(s)	947, 1118, 1528, 1800
TatI	WGTACW	1 cut(s)	1638
TauI	GCSGC	5 cut(s)	155, 257, 260, 480, 536
TfiI	GAWTC	4 cut(s)	1140, 1284, 1945, 1970
Tru1I	TTAA	6 cut(s)	29, 645, 950, 1059, 1463, 1803
Tru9I	TTAA	6 cut(s)	29, 645, 950, 1059, 1463, 1803
TscAI	CASTG	2 cut(s)	1074, 2013
TseFI	GTSAC	2 cut(s)	175, 2004
TseI	GCWGC	3 cut(s)	73, 1187, 1881
Tsp45I	GTSAC	2 cut(s)	175, 2004
TspDTI	ATGAA	6 cut(s)	17, 23, 823, 1746, 1749, 1962
TspGWI	ACGGA	2 cut(s)	292, 1144
TspRI	CASTG	2 cut(s)	1074, 2013
Tth111I	GACNNNGTC	2 cut(s)	659, 915
Van91I	CCANNNNNTGG	1 cut(s)	806
VspI	ATTAAT	1 cut(s)	1463
XceI	RCATGY	1 cut(s)	1607
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1534
XhoI	CTCGAG	1 cut(s)	470
XmiI	GTMKAC	2 cut(s)	279, 1317
XspI	CTAG	2 cut(s)	53, 686
ZraI	GACGTC	2 cut(s)	277, 661

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.