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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G06660 AT2G30820 AT2G30820 |
| fragaria_vesca | FvH4_6g38770 FvH4_6g38770 FvH4_6g38770 |
| malus_domestica | MD00G1163200.v1.1 MD00G1163300.v1.1 MD09G1146900.v1.1 MD17G1133500.v1.1 |
| prunus_persica | Prupe.3G178400_v2.0.a1 Prupe.3G178400_v2.0.a1 |
| pyrus_communis | pycom09g06740 pycom17g12800 |
| rosa_chinensis | RchiOBHm_Chr2g0152321 |
| rosa_laevigata | RLG00000020628 |
| rosa_multiflora | Rmu_sc0004002.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00095800 |
| rosa_rugosa | Rorug02G0432300 Rorug02G0432400 |
| rosa_samantha | Rh2AG493900 Rh2BG506200 Rh2CG480200 Rh2DG517300 |
| rosa_wichuraiana | Rw2G040620 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 953 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1281 |
| AccBSI | CCGCTC | 2 cut(s) | 129, 162 |
| AccIII | TCCGGA | 1 cut(s) | 345 |
| AciI | CCGC | 3 cut(s) | 127, 160, 830 |
| AclWI | GGATC | 3 cut(s) | 33, 288, 1335 |
| AcoI | YGGCCR | 1 cut(s) | 669 |
| AcsI | RAATTY | 4 cut(s) | 299, 404, 1159, 1303 |
| AcuI | CTGAAG | 5 cut(s) | 85, 428, 600, 864, 1407 |
| AfaI | GTAC | 4 cut(s) | 319, 553, 598, 972 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 48, 257, 688, 963, 1163, 1223, 1281 |
| AflII | CTTAAG | 1 cut(s) | 305 |
| AgsI | TTSAA | 7 cut(s) | 13, 341, 357, 409, 710, 1308, 1361 |
| AjnI | CCWGG | 8 cut(s) | 131, 250, 681, 787, 859, 882, 1121, 1204 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 643, 675 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 684, 716, 856, 888 |
| AluBI | AGCT | 6 cut(s) | 170, 353, 442, 564, 573, 779 |
| AluI | AGCT | 6 cut(s) | 170, 353, 442, 564, 573, 779 |
| Alw26I | GTCTC | 6 cut(s) | 183, 323, 912, 924, 1029, 1203 |
| AlwI | GGATC | 3 cut(s) | 33, 288, 1335 |
| Ama87I | CYCGRG | 1 cut(s) | 163 |
| Aor13HI | TCCGGA | 1 cut(s) | 345 |
| AoxI | GGCC | 5 cut(s) | 134, 294, 669, 880, 1214 |
| ApeKI | GCWGC | 2 cut(s) | 84, 466 |
| ApoI | RAATTY | 4 cut(s) | 299, 404, 1159, 1303 |
| AsuHPI | GGTGA | 2 cut(s) | 363, 648 |
| AvaI | CYCGRG | 1 cut(s) | 163 |
| AxyI | CCTNAGG | 1 cut(s) | 948 |
| BaeGI | GKGCMC | 2 cut(s) | 803, 956 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 309, 342 |
| BanI | GGYRCC | 1 cut(s) | 953 |
| BbsI | GAAGAC | 2 cut(s) | 996, 1476 |
| BbvI | GCAGC | 2 cut(s) | 71, 478 |
| BccI | CCATC | 4 cut(s) | 238, 384, 883, 1280 |
| BceAI | ACGGC | 1 cut(s) | 382 |
| BciT130I | CCWGG | 8 cut(s) | 133, 252, 683, 789, 861, 884, 1123, 1206 |
| BcoDI | GTCTC | 6 cut(s) | 183, 323, 912, 924, 1029, 1203 |
| BfaI | CTAG | 1 cut(s) | 1017 |
| BfmI | CTRYAG | 2 cut(s) | 321, 757 |
| BfrI | CTTAAG | 1 cut(s) | 305 |
| BisI | GCNGC | 2 cut(s) | 85, 467 |
| BlsI | GCNGC | 2 cut(s) | 86, 468 |
| BmcAI | AGTACT | 1 cut(s) | 553 |
| Bme1390I | CCNGG | 8 cut(s) | 133, 252, 683, 789, 861, 884, 1123, 1206 |
| BmeT110I | CYCGRG | 1 cut(s) | 163 |
| BmiI | GGNNCC | 4 cut(s) | 76, 396, 955, 1131 |
| BmrFI | CCNGG | 8 cut(s) | 133, 252, 683, 789, 861, 884, 1123, 1206 |
| BmrI | ACTGGG | 1 cut(s) | 329 |
| BmsI | GCATC | 4 cut(s) | 203, 737, 840, 1159 |
| BmuI | ACTGGG | 1 cut(s) | 329 |
| BpiI | GAAGAC | 2 cut(s) | 996, 1476 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 941, 973 |
| BpmI | CTGGAG | 5 cut(s) | 115, 771, 1148, 1227, 1391 |
| BpuEI | CTTGAG | 2 cut(s) | 269, 1125 |
| BsaI | GGTCTC | 2 cut(s) | 323, 924 |
| BsaJI | CCNNGG | 3 cut(s) | 78, 682, 883 |
| BsaWI | WCCGGW | 2 cut(s) | 345, 973 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 113, 143, 159, 189, 631, 661 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 48, 257, 688, 963, 1163, 1223, 1281 |
| Bse1I | ACTGG | 4 cut(s) | 335, 559, 1133, 1247 |
| Bse21I | CCTNAGG | 1 cut(s) | 948 |
| BseAI | TCCGGA | 1 cut(s) | 345 |
| BseBI | CCWGG | 8 cut(s) | 133, 252, 683, 789, 861, 884, 1123, 1206 |
| BseDI | CCNNGG | 3 cut(s) | 78, 682, 883 |
| BseGI | GGATG | 5 cut(s) | 230, 428, 728, 1291, 1487 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 48, 257, 688, 963, 1163, 1223, 1281 |
| BseMII | CTCAG | 7 cut(s) | 194, 583, 624, 935, 939, 1418, 1487 |
| BseNI | ACTGG | 4 cut(s) | 335, 559, 1133, 1247 |
| BseRI | GAGGAG | 1 cut(s) | 145 |
| BseSI | GKGCMC | 2 cut(s) | 803, 956 |
| BseXI | GCAGC | 2 cut(s) | 71, 478 |
| BseYI | CCCAGC | 1 cut(s) | 1491 |
| BsgI | GTGCAG | 1 cut(s) | 55 |
| Bsh1285I | CGRYCG | 1 cut(s) | 118 |
| BshFI | GGCC | 5 cut(s) | 136, 296, 671, 882, 1216 |
| BshNI | GGYRCC | 1 cut(s) | 953 |
| BsiEI | CGRYCG | 1 cut(s) | 118 |
| BsiHKCI | CYCGRG | 1 cut(s) | 163 |
| BsiSI | CCGG | 3 cut(s) | 72, 346, 974 |
| BslFI | GGGAC | 2 cut(s) | 125, 274 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 48, 257, 688, 963, 1163, 1223, 1281 |
| BsmAI | GTCTC | 6 cut(s) | 183, 323, 912, 924, 1029, 1203 |
| BsmFI | GGGAC | 2 cut(s) | 125, 274 |
| BsmI | GAATGC | 1 cut(s) | 1431 |
| BsnI | GGCC | 5 cut(s) | 136, 296, 671, 882, 1216 |
| Bso31I | GGTCTC | 2 cut(s) | 323, 924 |
| BsoBI | CYCGRG | 1 cut(s) | 163 |
| Bsp1286I | GDGCHC | 2 cut(s) | 803, 956 |
| Bsp13I | TCCGGA | 1 cut(s) | 345 |
| Bsp143I | GATC | 6 cut(s) | 38, 62, 115, 280, 625, 1327 |
| Bsp19I | CCATGG | 1 cut(s) | 78 |
| BspACI | CCGC | 3 cut(s) | 127, 160, 830 |
| BspANI | GGCC | 5 cut(s) | 136, 296, 671, 882, 1216 |
| BspCNI | CTCAG | 7 cut(s) | 193, 582, 625, 934, 940, 1417, 1486 |
| BspEI | TCCGGA | 1 cut(s) | 345 |
| BspHI | TCATGA | 1 cut(s) | 379 |
| BspLI | GGNNCC | 4 cut(s) | 76, 396, 955, 1131 |
| BspPI | GGATC | 3 cut(s) | 33, 288, 1335 |
| BspT107I | GGYRCC | 1 cut(s) | 953 |
| BspTI | CTTAAG | 1 cut(s) | 305 |
| BspTNI | GGTCTC | 2 cut(s) | 323, 924 |
| BsrBI | CCGCTC | 2 cut(s) | 129, 162 |
| BsrI | ACTGG | 4 cut(s) | 335, 559, 1133, 1247 |
| BssECI | CCNNGG | 3 cut(s) | 78, 682, 883 |
| BssMI | GATC | 6 cut(s) | 38, 62, 115, 280, 625, 1327 |
| BssT1I | CCWWGG | 1 cut(s) | 78 |
| Bst2UI | CCWGG | 8 cut(s) | 133, 252, 683, 789, 861, 884, 1123, 1206 |
| Bst4CI | ACNGT | 4 cut(s) | 188, 643, 868, 1187 |
| Bst6I | CTCTTC | 4 cut(s) | 840, 972, 1056, 1356 |
| BstAFI | CTTAAG | 1 cut(s) | 305 |
| BstC8I | GCNNGC | 2 cut(s) | 69, 1347 |
| BstDEI | CTNAG | 7 cut(s) | 180, 569, 633, 921, 948, 1404, 1473 |
| BstDSI | CCRYGG | 1 cut(s) | 78 |
| BstF5I | GGATG | 5 cut(s) | 230, 428, 728, 1291, 1487 |
| BstKTI | GATC | 6 cut(s) | 41, 65, 118, 283, 628, 1330 |
| BstMAI | GTCTC | 6 cut(s) | 183, 323, 912, 924, 1029, 1203 |
| BstMBI | GATC | 6 cut(s) | 38, 62, 115, 280, 625, 1327 |
| BstMCI | CGRYCG | 1 cut(s) | 118 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 126, 570 |
| BstNI | CCWGG | 8 cut(s) | 133, 252, 683, 789, 861, 884, 1123, 1206 |
| BstNSI | RCATGY | 1 cut(s) | 1349 |
| BstSCI | CCNGG | 8 cut(s) | 131, 250, 681, 787, 859, 882, 1121, 1204 |
| BstSFI | CTRYAG | 2 cut(s) | 321, 757 |
| BstSLI | GKGCMC | 2 cut(s) | 803, 956 |
| BstV1I | GCAGC | 2 cut(s) | 71, 478 |
| BstV2I | GAAGAC | 2 cut(s) | 996, 1476 |
| BstX2I | RGATCY | 2 cut(s) | 38, 280 |
| BstYI | RGATCY | 2 cut(s) | 38, 280 |
| Bsu36I | CCTNAGG | 1 cut(s) | 948 |
| BsuRI | GGCC | 5 cut(s) | 136, 296, 671, 882, 1216 |
| BtgI | CCRYGG | 1 cut(s) | 78 |
| BtsCI | GGATG | 5 cut(s) | 230, 428, 728, 1291, 1487 |
| BtsI | GCAGTG | 1 cut(s) | 503 |
| BtsIMutI | CAGTG | 5 cut(s) | 503, 639, 1140, 1240, 1509 |
| Cac8I | GCNNGC | 2 cut(s) | 69, 1347 |
| CciI | TCATGA | 1 cut(s) | 379 |
| Csp6I | GTAC | 4 cut(s) | 318, 552, 597, 971 |
| CspCI | CAANNNNNGTGG | 1 cut(s) | 1485 |
| CviAII | CATG | 5 cut(s) | 79, 380, 414, 998, 1346 |
| CviQI | GTAC | 4 cut(s) | 318, 552, 597, 971 |
| DdeI | CTNAG | 7 cut(s) | 180, 569, 633, 921, 948, 1404, 1473 |
| DpnI | GATC | 6 cut(s) | 40, 64, 117, 282, 627, 1329 |
| DpnII | GATC | 6 cut(s) | 38, 62, 115, 280, 625, 1327 |
| EaeI | YGGCCR | 1 cut(s) | 669 |
| Eam1104I | CTCTTC | 4 cut(s) | 840, 972, 1056, 1356 |
| EarI | CTCTTC | 4 cut(s) | 840, 972, 1056, 1356 |
| Eco130I | CCWWGG | 1 cut(s) | 78 |
| Eco147I | AGGCCT | 2 cut(s) | 136, 1216 |
| Eco31I | GGTCTC | 2 cut(s) | 323, 924 |
| Eco57I | CTGAAG | 5 cut(s) | 85, 428, 600, 864, 1407 |
| Eco81I | CCTNAGG | 1 cut(s) | 948 |
| Eco88I | CYCGRG | 1 cut(s) | 163 |
| EcoRII | CCWGG | 8 cut(s) | 131, 250, 681, 787, 859, 882, 1121, 1204 |
| EcoT14I | CCWWGG | 1 cut(s) | 78 |
| ErhI | CCWWGG | 1 cut(s) | 78 |
| FaeI | CATG | 5 cut(s) | 82, 383, 417, 1001, 1349 |
| FaqI | GGGAC | 2 cut(s) | 125, 274 |
| FatI | CATG | 5 cut(s) | 78, 379, 413, 997, 1345 |
| FauI | CCCGC | 2 cut(s) | 167, 837 |
| Fnu4HI | GCNGC | 2 cut(s) | 85, 467 |
| FokI | GGATG | 5 cut(s) | 217, 415, 715, 1298, 1474 |
| Fsp4HI | GCNGC | 2 cut(s) | 85, 467 |
| FspBI | CTAG | 1 cut(s) | 1017 |
| GluI | GCNGC | 2 cut(s) | 85, 467 |
| GsaI | CCCAGC | 1 cut(s) | 1495 |
| GsuI | CTGGAG | 5 cut(s) | 115, 771, 1148, 1227, 1391 |
| HaeIII | GGCC | 5 cut(s) | 136, 296, 671, 882, 1216 |
| HapII | CCGG | 3 cut(s) | 72, 346, 974 |
| Hin1II | CATG | 5 cut(s) | 82, 383, 417, 1001, 1349 |
| HindIII | AAGCTT | 2 cut(s) | 351, 440 |
| HpaII | CCGG | 3 cut(s) | 72, 346, 974 |
| HphI | GGTGA | 2 cut(s) | 363, 648 |
| HpyAV | CCTTC | 4 cut(s) | 552, 575, 669, 1369 |
| HpyCH4III | ACNGT | 4 cut(s) | 188, 643, 868, 1187 |
| HpyCH4V | TGCA | 4 cut(s) | 36, 853, 1046, 1480 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 126, 570 |
| HpyF3I | CTNAG | 7 cut(s) | 180, 569, 633, 921, 948, 1404, 1473 |
| Hsp92II | CATG | 5 cut(s) | 82, 383, 417, 1001, 1349 |
| Kpn2I | TCCGGA | 1 cut(s) | 345 |
| Kzo9I | GATC | 6 cut(s) | 38, 62, 115, 280, 625, 1327 |
| LmnI | GCTCC | 6 cut(s) | 74, 134, 167, 394, 561, 1129 |
| Lsp1109I | GCAGC | 2 cut(s) | 71, 478 |
| LweI | GCATC | 4 cut(s) | 203, 737, 840, 1159 |
| MaeI | CTAG | 1 cut(s) | 1017 |
| MaeIII | GTNAC | 5 cut(s) | 643, 713, 752, 1095, 1135 |
| MalI | GATC | 6 cut(s) | 40, 64, 117, 282, 627, 1329 |
| MbiI | CCGCTC | 2 cut(s) | 129, 162 |
| MboI | GATC | 6 cut(s) | 38, 62, 115, 280, 625, 1327 |
| MflI | RGATCY | 2 cut(s) | 38, 280 |
| MhlI | GDGCHC | 2 cut(s) | 803, 956 |
| MluCI | AATT | 6 cut(s) | 20, 299, 404, 1159, 1221, 1303 |
| MlyI | GAGTC | 6 cut(s) | 114, 256, 545, 829, 1132, 1250 |
| MmeI | TCCRAC | 2 cut(s) | 674, 848 |
| MroI | TCCGGA | 1 cut(s) | 345 |
| MseI | TTAA | 4 cut(s) | 306, 363, 435, 483 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1245 |
| MspA1I | CMGCKG | 1 cut(s) | 832 |
| MspCI | CTTAAG | 1 cut(s) | 305 |
| MspI | CCGG | 3 cut(s) | 72, 346, 974 |
| MspR9I | CCNGG | 8 cut(s) | 133, 252, 683, 789, 861, 884, 1123, 1206 |
| Mva1269I | GAATGC | 1 cut(s) | 1431 |
| MvaI | CCWGG | 8 cut(s) | 133, 252, 683, 789, 861, 884, 1123, 1206 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 126, 570 |
| NcoI | CCATGG | 1 cut(s) | 78 |
| NdeII | GATC | 6 cut(s) | 38, 62, 115, 280, 625, 1327 |
| NlaIII | CATG | 5 cut(s) | 82, 383, 417, 1001, 1349 |
| NlaIV | GGNNCC | 4 cut(s) | 76, 396, 955, 1131 |
| NmeAIII | GCCGAG | 1 cut(s) | 647 |
| NmuCI | GTSAC | 2 cut(s) | 713, 1135 |
| NspI | RCATGY | 1 cut(s) | 1349 |
| PaeI | GCATGC | 1 cut(s) | 1349 |
| PagI | TCATGA | 1 cut(s) | 379 |
| PceI | AGGCCT | 2 cut(s) | 136, 1216 |
| PctI | GAATGC | 1 cut(s) | 1431 |
| PfeI | GAWTC | 8 cut(s) | 224, 389, 454, 616, 912, 986, 1106, 1296 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1281 |
| PfoI | TCCNGGA | 2 cut(s) | 787, 1204 |
| PkrI | GCNGC | 2 cut(s) | 86, 468 |
| Ple19I | CGATCG | 1 cut(s) | 118 |
| PleI | GAGTC | 6 cut(s) | 113, 256, 544, 829, 1132, 1250 |
| PpsI | GAGTC | 6 cut(s) | 113, 256, 544, 829, 1132, 1250 |
| Psp6I | CCWGG | 8 cut(s) | 131, 250, 681, 787, 859, 882, 1121, 1204 |
| PspFI | CCCAGC | 1 cut(s) | 1491 |
| PspGI | CCWGG | 8 cut(s) | 131, 250, 681, 787, 859, 882, 1121, 1204 |
| PspN4I | GGNNCC | 4 cut(s) | 76, 396, 955, 1131 |
| PsuI | RGATCY | 2 cut(s) | 38, 280 |
| PvuI | CGATCG | 1 cut(s) | 118 |
| RsaI | GTAC | 4 cut(s) | 319, 553, 598, 972 |
| RsaNI | GTAC | 4 cut(s) | 318, 552, 597, 971 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1245 |
| SaqAI | TTAA | 4 cut(s) | 306, 363, 435, 483 |
| SatI | GCNGC | 2 cut(s) | 85, 467 |
| Sau3AI | GATC | 6 cut(s) | 38, 62, 115, 280, 625, 1327 |
| ScaI | AGTACT | 1 cut(s) | 553 |
| SchI | GAGTC | 6 cut(s) | 114, 256, 545, 829, 1132, 1250 |
| ScrFI | CCNGG | 8 cut(s) | 133, 252, 683, 789, 861, 884, 1123, 1206 |
| SduI | GDGCHC | 2 cut(s) | 803, 956 |
| SfaNI | GCATC | 4 cut(s) | 203, 737, 840, 1159 |
| SfcI | CTRYAG | 2 cut(s) | 321, 757 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1245 |
| SmlI | CTYRAG | 3 cut(s) | 284, 305, 1140 |
| SmoI | CTYRAG | 3 cut(s) | 284, 305, 1140 |
| SphI | GCATGC | 1 cut(s) | 1349 |
| Sse9I | AATT | 6 cut(s) | 20, 299, 404, 1159, 1221, 1303 |
| SseBI | AGGCCT | 2 cut(s) | 136, 1216 |
| SsiI | CCGC | 3 cut(s) | 127, 160, 830 |
| SspMI | CTAG | 1 cut(s) | 1017 |
| StuI | AGGCCT | 2 cut(s) | 136, 1216 |
| StyD4I | CCNGG | 8 cut(s) | 131, 250, 681, 787, 859, 882, 1121, 1204 |
| StyI | CCWWGG | 1 cut(s) | 78 |
| TaaI | ACNGT | 4 cut(s) | 188, 643, 868, 1187 |
| TaqI | TCGA | 2 cut(s) | 910, 1440 |
| TasI | AATT | 6 cut(s) | 20, 299, 404, 1159, 1221, 1303 |
| TatI | WGTACW | 1 cut(s) | 551 |
| TfiI | GAWTC | 8 cut(s) | 224, 389, 454, 616, 912, 986, 1106, 1296 |
| Tru1I | TTAA | 4 cut(s) | 306, 363, 435, 483 |
| Tru9I | TTAA | 4 cut(s) | 306, 363, 435, 483 |
| TscAI | CASTG | 5 cut(s) | 503, 646, 1140, 1247, 1509 |
| TseFI | GTSAC | 2 cut(s) | 713, 1135 |
| TseI | GCWGC | 2 cut(s) | 84, 466 |
| Tsp45I | GTSAC | 2 cut(s) | 713, 1135 |
| TspGWI | ACGGA | 1 cut(s) | 31 |
| TspRI | CASTG | 5 cut(s) | 503, 646, 1140, 1247, 1509 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1281 |
| Vha464I | CTTAAG | 1 cut(s) | 305 |
| XapI | RAATTY | 4 cut(s) | 299, 404, 1159, 1303 |
| XceI | RCATGY | 1 cut(s) | 1349 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 551 |
| XspI | CTAG | 1 cut(s) | 1017 |
| ZrmI | AGTACT | 1 cut(s) | 553 |