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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G06660 AT2G30820 AT2G30820 |
| fragaria_vesca | FvH4_6g38770 FvH4_6g38770 FvH4_6g38770 |
| malus_domestica | MD00G1163200.v1.1 MD00G1163300.v1.1 MD09G1146900.v1.1 MD17G1133500.v1.1 |
| prunus_persica | Prupe.3G178400_v2.0.a1 Prupe.3G178400_v2.0.a1 |
| pyrus_communis | pycom09g06740 pycom17g12800 |
| rosa_chinensis | RchiOBHm_Chr2g0152321 |
| rosa_laevigata | RLG00000020628 |
| rosa_multiflora | Rmu_sc0004002.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00095800 |
| rosa_rugosa | Rorug02G0432300 Rorug02G0432400 |
| rosa_samantha | Rh2AG493900 Rh2BG506200 Rh2CG480200 Rh2DG517300 |
| rosa_wichuraiana | Rw2G040620 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1272 |
| AccBSI | CCGCTC | 1 cut(s) | 129 |
| AccII | CGCG | 1 cut(s) | 160 |
| AccIII | TCCGGA | 1 cut(s) | 1022 |
| AciI | CCGC | 2 cut(s) | 127, 1088 |
| AclWI | GGATC | 1 cut(s) | 1326 |
| AcsI | RAATTY | 5 cut(s) | 284, 327, 389, 1062, 1294 |
| AcuI | CTGAAG | 6 cut(s) | 85, 231, 413, 585, 1169, 1398 |
| AfaI | GTAC | 3 cut(s) | 304, 538, 583 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 240, 673, 1214, 1269, 1272 |
| AflII | CTTAAG | 1 cut(s) | 290 |
| AgsI | TTSAA | 7 cut(s) | 13, 326, 342, 394, 479, 695, 1299 |
| AjnI | CCWGG | 4 cut(s) | 772, 844, 1106, 1195 |
| AluBI | AGCT | 9 cut(s) | 77, 170, 209, 268, 338, 427, 549, 558, 764 |
| AluI | AGCT | 9 cut(s) | 77, 170, 209, 268, 338, 427, 549, 558, 764 |
| Alw21I | GWGCWC | 1 cut(s) | 270 |
| Alw26I | GTCTC | 7 cut(s) | 99, 183, 308, 515, 897, 1014, 1152 |
| AlwI | GGATC | 1 cut(s) | 1326 |
| Ama87I | CYCGRG | 1 cut(s) | 163 |
| Aor13HI | TCCGGA | 1 cut(s) | 1022 |
| AoxI | GGCC | 3 cut(s) | 134, 279, 1205 |
| ApeKI | GCWGC | 1 cut(s) | 451 |
| ApoI | RAATTY | 5 cut(s) | 284, 327, 389, 1062, 1294 |
| AspLEI | GCGC | 1 cut(s) | 162 |
| AspS9I | GGNCC | 1 cut(s) | 903 |
| AsuHPI | GGTGA | 4 cut(s) | 131, 348, 633, 1007 |
| AvaI | CYCGRG | 1 cut(s) | 163 |
| AvaII | GGWCC | 1 cut(s) | 903 |
| AxyI | CCTNAGG | 1 cut(s) | 933 |
| BaeGI | GKGCMC | 1 cut(s) | 788 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 294, 327 |
| BanII | GRGCYC | 2 cut(s) | 270, 384 |
| Bbv12I | GWGCWC | 1 cut(s) | 270 |
| BbvI | GCAGC | 1 cut(s) | 463 |
| BccI | CCATC | 3 cut(s) | 129, 369, 868 |
| BciT130I | CCWGG | 4 cut(s) | 774, 846, 1108, 1197 |
| BcoDI | GTCTC | 7 cut(s) | 99, 183, 308, 515, 897, 1014, 1152 |
| BfaI | CTAG | 2 cut(s) | 578, 1002 |
| BfmI | CTRYAG | 2 cut(s) | 306, 742 |
| BfrI | CTTAAG | 1 cut(s) | 290 |
| BisI | GCNGC | 1 cut(s) | 452 |
| BlsI | GCNGC | 1 cut(s) | 453 |
| Bme1390I | CCNGG | 4 cut(s) | 774, 846, 1108, 1197 |
| Bme18I | GGWCC | 1 cut(s) | 903 |
| BmeT110I | CYCGRG | 1 cut(s) | 163 |
| BmgT120I | GGNCC | 1 cut(s) | 903 |
| BmiI | GGNNCC | 1 cut(s) | 905 |
| BmrFI | CCNGG | 4 cut(s) | 774, 846, 1108, 1197 |
| BmrI | ACTGGG | 2 cut(s) | 314, 901 |
| BmsI | GCATC | 3 cut(s) | 722, 825, 948 |
| BmuI | ACTGGG | 2 cut(s) | 314, 901 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 926, 958 |
| BpmI | CTGGAG | 1 cut(s) | 213 |
| BpuEI | CTTGAG | 2 cut(s) | 254, 1116 |
| BsaBI | GATNNNNATC | 1 cut(s) | 120 |
| BsaI | GGTCTC | 1 cut(s) | 308 |
| BsaJI | CCNNGG | 1 cut(s) | 1196 |
| BsaWI | WCCGGW | 1 cut(s) | 1022 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 159, 189 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 240, 673, 1214, 1269, 1272 |
| Bse1I | ACTGG | 6 cut(s) | 320, 544, 667, 907, 1118, 1238 |
| Bse21I | CCTNAGG | 1 cut(s) | 933 |
| Bse8I | GATNNNNATC | 1 cut(s) | 120 |
| BseAI | TCCGGA | 1 cut(s) | 1022 |
| BseBI | CCWGG | 4 cut(s) | 774, 846, 1108, 1197 |
| BseDI | CCNNGG | 1 cut(s) | 1196 |
| BseGI | GGATG | 3 cut(s) | 413, 713, 1478 |
| BseJI | GATNNNNATC | 1 cut(s) | 120 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 240, 673, 1214, 1269, 1272 |
| BseMII | CTCAG | 7 cut(s) | 164, 194, 568, 609, 924, 1409, 1478 |
| BseNI | ACTGG | 6 cut(s) | 320, 544, 667, 907, 1118, 1238 |
| BseRI | GAGGAG | 2 cut(s) | 234, 1367 |
| BseSI | GKGCMC | 1 cut(s) | 788 |
| BseXI | GCAGC | 1 cut(s) | 463 |
| BseYI | CCCAGC | 1 cut(s) | 1482 |
| BsgI | GTGCAG | 2 cut(s) | 55, 691 |
| Bsh1236I | CGCG | 1 cut(s) | 160 |
| Bsh1285I | CGRYCG | 1 cut(s) | 118 |
| BshFI | GGCC | 3 cut(s) | 136, 281, 1207 |
| BsiEI | CGRYCG | 1 cut(s) | 118 |
| BsiHKAI | GWGCWC | 1 cut(s) | 270 |
| BsiHKCI | CYCGRG | 1 cut(s) | 163 |
| BsiSI | CCGG | 2 cut(s) | 72, 1023 |
| BslFI | GGGAC | 4 cut(s) | 125, 889, 1214, 1289 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 240, 673, 1214, 1269, 1272 |
| BsmAI | GTCTC | 7 cut(s) | 99, 183, 308, 515, 897, 1014, 1152 |
| BsmBI | CGTCTC | 1 cut(s) | 1152 |
| BsmFI | GGGAC | 4 cut(s) | 125, 889, 1214, 1289 |
| BsmI | GAATGC | 1 cut(s) | 1422 |
| BsnI | GGCC | 3 cut(s) | 136, 281, 1207 |
| Bso31I | GGTCTC | 1 cut(s) | 308 |
| BsoBI | CYCGRG | 1 cut(s) | 163 |
| Bsp1286I | GDGCHC | 3 cut(s) | 270, 384, 788 |
| Bsp13I | TCCGGA | 1 cut(s) | 1022 |
| Bsp143I | GATC | 5 cut(s) | 38, 62, 115, 238, 1318 |
| BspACI | CCGC | 2 cut(s) | 127, 1088 |
| BspANI | GGCC | 3 cut(s) | 136, 281, 1207 |
| BspCNI | CTCAG | 7 cut(s) | 163, 193, 567, 610, 925, 1408, 1477 |
| BspEI | TCCGGA | 1 cut(s) | 1022 |
| BspFNI | CGCG | 1 cut(s) | 160 |
| BspHI | TCATGA | 1 cut(s) | 364 |
| BspLI | GGNNCC | 1 cut(s) | 905 |
| BspPI | GGATC | 1 cut(s) | 1326 |
| BspTI | CTTAAG | 1 cut(s) | 290 |
| BspTNI | GGTCTC | 1 cut(s) | 308 |
| BsrBI | CCGCTC | 1 cut(s) | 129 |
| BsrI | ACTGG | 6 cut(s) | 320, 544, 667, 907, 1118, 1238 |
| BssECI | CCNNGG | 1 cut(s) | 1196 |
| BssMI | GATC | 5 cut(s) | 38, 62, 115, 238, 1318 |
| Bst2UI | CCWGG | 4 cut(s) | 774, 846, 1108, 1197 |
| Bst4CI | ACNGT | 4 cut(s) | 628, 743, 853, 1347 |
| Bst6I | CTCTTC | 3 cut(s) | 207, 474, 1041 |
| BstAFI | CTTAAG | 1 cut(s) | 290 |
| BstC8I | GCNNGC | 1 cut(s) | 1338 |
| BstDEI | CTNAG | 8 cut(s) | 150, 180, 554, 618, 652, 933, 1395, 1464 |
| BstF5I | GGATG | 3 cut(s) | 413, 713, 1478 |
| BstFNI | CGCG | 1 cut(s) | 160 |
| BstHHI | GCGC | 1 cut(s) | 162 |
| BstKTI | GATC | 5 cut(s) | 41, 65, 118, 241, 1321 |
| BstMAI | GTCTC | 7 cut(s) | 99, 183, 308, 515, 897, 1014, 1152 |
| BstMBI | GATC | 5 cut(s) | 38, 62, 115, 238, 1318 |
| BstMCI | CGRYCG | 1 cut(s) | 118 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 126, 555, 761 |
| BstNI | CCWGG | 4 cut(s) | 774, 846, 1108, 1197 |
| BstNSI | RCATGY | 1 cut(s) | 1340 |
| BstSCI | CCNGG | 4 cut(s) | 772, 844, 1106, 1195 |
| BstSFI | CTRYAG | 2 cut(s) | 306, 742 |
| BstSLI | GKGCMC | 1 cut(s) | 788 |
| BstUI | CGCG | 1 cut(s) | 160 |
| BstV1I | GCAGC | 1 cut(s) | 463 |
| Bsu36I | CCTNAGG | 1 cut(s) | 933 |
| BsuRI | GGCC | 3 cut(s) | 136, 281, 1207 |
| BtsCI | GGATG | 3 cut(s) | 413, 713, 1478 |
| BtsIMutI | CAGTG | 6 cut(s) | 624, 674, 815, 1125, 1231, 1500 |
| Cac8I | GCNNGC | 1 cut(s) | 1338 |
| CciI | TCATGA | 1 cut(s) | 364 |
| CfoI | GCGC | 1 cut(s) | 162 |
| Cfr13I | GGNCC | 1 cut(s) | 903 |
| CseI | GACGC | 2 cut(s) | 1169, 1256 |
| Csp6I | GTAC | 3 cut(s) | 303, 537, 582 |
| CspCI | CAANNNNNGTGG | 1 cut(s) | 1476 |
| CviAII | CATG | 4 cut(s) | 365, 399, 983, 1337 |
| CviQI | GTAC | 3 cut(s) | 303, 537, 582 |
| DdeI | CTNAG | 8 cut(s) | 150, 180, 554, 618, 652, 933, 1395, 1464 |
| DpnI | GATC | 5 cut(s) | 40, 64, 117, 240, 1320 |
| DpnII | GATC | 5 cut(s) | 38, 62, 115, 238, 1318 |
| Eam1104I | CTCTTC | 3 cut(s) | 207, 474, 1041 |
| EarI | CTCTTC | 3 cut(s) | 207, 474, 1041 |
| EciI | GGCGGA | 1 cut(s) | 1103 |
| Ecl136II | GAGCTC | 1 cut(s) | 268 |
| Eco147I | AGGCCT | 1 cut(s) | 1207 |
| Eco24I | GRGCYC | 2 cut(s) | 270, 384 |
| Eco31I | GGTCTC | 1 cut(s) | 308 |
| Eco47I | GGWCC | 1 cut(s) | 903 |
| Eco53kI | GAGCTC | 1 cut(s) | 268 |
| Eco57I | CTGAAG | 6 cut(s) | 85, 231, 413, 585, 1169, 1398 |
| Eco81I | CCTNAGG | 1 cut(s) | 933 |
| Eco88I | CYCGRG | 1 cut(s) | 163 |
| EcoICRI | GAGCTC | 1 cut(s) | 268 |
| EcoO109I | RGGNCCY | 1 cut(s) | 903 |
| EcoRII | CCWGG | 4 cut(s) | 772, 844, 1106, 1195 |
| EcoT38I | GRGCYC | 2 cut(s) | 270, 384 |
| Esp3I | CGTCTC | 1 cut(s) | 1152 |
| FaeI | CATG | 4 cut(s) | 368, 402, 986, 1340 |
| FaqI | GGGAC | 4 cut(s) | 125, 889, 1214, 1289 |
| FatI | CATG | 4 cut(s) | 364, 398, 982, 1336 |
| Fnu4HI | GCNGC | 1 cut(s) | 452 |
| FokI | GGATG | 3 cut(s) | 400, 700, 1465 |
| FriOI | GRGCYC | 2 cut(s) | 270, 384 |
| Fsp4HI | GCNGC | 1 cut(s) | 452 |
| FspBI | CTAG | 2 cut(s) | 578, 1002 |
| GlaI | GCGC | 1 cut(s) | 161 |
| GluI | GCNGC | 1 cut(s) | 452 |
| GsaI | CCCAGC | 1 cut(s) | 1486 |
| GsuI | CTGGAG | 1 cut(s) | 213 |
| HaeIII | GGCC | 3 cut(s) | 136, 281, 1207 |
| HapII | CCGG | 2 cut(s) | 72, 1023 |
| HgaI | GACGC | 2 cut(s) | 1169, 1256 |
| HhaI | GCGC | 1 cut(s) | 162 |
| Hin1II | CATG | 4 cut(s) | 368, 402, 986, 1340 |
| Hin6I | GCGC | 1 cut(s) | 160 |
| HinP1I | GCGC | 1 cut(s) | 160 |
| HindIII | AAGCTT | 2 cut(s) | 336, 425 |
| HpaII | CCGG | 2 cut(s) | 72, 1023 |
| HphI | GGTGA | 4 cut(s) | 131, 348, 633, 1007 |
| Hpy166II | GTNNAC | 3 cut(s) | 251, 575, 856 |
| Hpy8I | GTNNAC | 3 cut(s) | 251, 575, 856 |
| HpyAV | CCTTC | 3 cut(s) | 560, 1276, 1360 |
| HpyCH4III | ACNGT | 4 cut(s) | 628, 743, 853, 1347 |
| HpyCH4V | TGCA | 6 cut(s) | 36, 672, 755, 838, 1031, 1471 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 126, 555, 761 |
| HpyF3I | CTNAG | 8 cut(s) | 150, 180, 554, 618, 652, 933, 1395, 1464 |
| Hsp92II | CATG | 4 cut(s) | 368, 402, 986, 1340 |
| HspAI | GCGC | 1 cut(s) | 160 |
| Kpn2I | TCCGGA | 1 cut(s) | 1022 |
| Kzo9I | GATC | 5 cut(s) | 38, 62, 115, 238, 1318 |
| LmnI | GCTCC | 3 cut(s) | 74, 167, 265 |
| Lsp1109I | GCAGC | 1 cut(s) | 463 |
| LweI | GCATC | 3 cut(s) | 722, 825, 948 |
| MaeI | CTAG | 2 cut(s) | 578, 1002 |
| MaeIII | GTNAC | 3 cut(s) | 628, 737, 1120 |
| MalI | GATC | 5 cut(s) | 40, 64, 117, 240, 1320 |
| MbiI | CCGCTC | 1 cut(s) | 129 |
| MboI | GATC | 5 cut(s) | 38, 62, 115, 238, 1318 |
| MhlI | GDGCHC | 3 cut(s) | 270, 384, 788 |
| MluCI | AATT | 9 cut(s) | 20, 255, 284, 327, 348, 389, 1062, 1212, 1294 |
| MlyI | GAGTC | 2 cut(s) | 814, 1016 |
| MmeI | TCCRAC | 2 cut(s) | 833, 1341 |
| MroI | TCCGGA | 1 cut(s) | 1022 |
| MseI | TTAA | 4 cut(s) | 291, 347, 420, 468 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1236 |
| MspCI | CTTAAG | 1 cut(s) | 290 |
| MspI | CCGG | 2 cut(s) | 72, 1023 |
| MspR9I | CCNGG | 4 cut(s) | 774, 846, 1108, 1197 |
| Mva1269I | GAATGC | 1 cut(s) | 1422 |
| MvaI | CCWGG | 4 cut(s) | 774, 846, 1108, 1197 |
| MvnI | CGCG | 1 cut(s) | 160 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 126, 555, 761 |
| NdeII | GATC | 5 cut(s) | 38, 62, 115, 238, 1318 |
| NlaIII | CATG | 4 cut(s) | 368, 402, 986, 1340 |
| NlaIV | GGNNCC | 1 cut(s) | 905 |
| NmeAIII | GCCGAG | 1 cut(s) | 112 |
| NmuCI | GTSAC | 1 cut(s) | 1120 |
| NspI | RCATGY | 1 cut(s) | 1340 |
| PaeI | GCATGC | 1 cut(s) | 1340 |
| PagI | TCATGA | 1 cut(s) | 364 |
| PceI | AGGCCT | 1 cut(s) | 1207 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1437 |
| PctI | GAATGC | 1 cut(s) | 1422 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1272 |
| PfoI | TCCNGGA | 1 cut(s) | 772 |
| PkrI | GCNGC | 1 cut(s) | 453 |
| Ple19I | CGATCG | 1 cut(s) | 118 |
| PleI | GAGTC | 2 cut(s) | 814, 1015 |
| PpsI | GAGTC | 2 cut(s) | 814, 1015 |
| PpuMI | RGGWCCY | 1 cut(s) | 903 |
| Psp124BI | GAGCTC | 1 cut(s) | 270 |
| Psp5II | RGGWCCY | 1 cut(s) | 903 |
| Psp6I | CCWGG | 4 cut(s) | 772, 844, 1106, 1195 |
| PspFI | CCCAGC | 1 cut(s) | 1482 |
| PspGI | CCWGG | 4 cut(s) | 772, 844, 1106, 1195 |
| PspN4I | GGNNCC | 1 cut(s) | 905 |
| PspPI | GGNCC | 1 cut(s) | 903 |
| PspPPI | RGGWCCY | 1 cut(s) | 903 |
| PvuI | CGATCG | 1 cut(s) | 118 |
| RsaI | GTAC | 3 cut(s) | 304, 538, 583 |
| RsaNI | GTAC | 3 cut(s) | 303, 537, 582 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1236 |
| SacI | GAGCTC | 1 cut(s) | 270 |
| SaqAI | TTAA | 4 cut(s) | 291, 347, 420, 468 |
| SatI | GCNGC | 1 cut(s) | 452 |
| Sau3AI | GATC | 5 cut(s) | 38, 62, 115, 238, 1318 |
| Sau96I | GGNCC | 1 cut(s) | 903 |
| SchI | GAGTC | 2 cut(s) | 814, 1016 |
| ScrFI | CCNGG | 4 cut(s) | 774, 846, 1108, 1197 |
| SduI | GDGCHC | 3 cut(s) | 270, 384, 788 |
| SfaNI | GCATC | 3 cut(s) | 722, 825, 948 |
| SfcI | CTRYAG | 2 cut(s) | 306, 742 |
| SinI | GGWCC | 1 cut(s) | 903 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1236 |
| SmlI | CTYRAG | 3 cut(s) | 269, 290, 1131 |
| SmoI | CTYRAG | 3 cut(s) | 269, 290, 1131 |
| SphI | GCATGC | 1 cut(s) | 1340 |
| Sse9I | AATT | 9 cut(s) | 20, 255, 284, 327, 348, 389, 1062, 1212, 1294 |
| SseBI | AGGCCT | 1 cut(s) | 1207 |
| SsiI | CCGC | 2 cut(s) | 127, 1088 |
| SspMI | CTAG | 2 cut(s) | 578, 1002 |
| SstI | GAGCTC | 1 cut(s) | 270 |
| StuI | AGGCCT | 1 cut(s) | 1207 |
| StyD4I | CCNGG | 4 cut(s) | 772, 844, 1106, 1195 |
| TaaI | ACNGT | 4 cut(s) | 628, 743, 853, 1347 |
| TaqI | TCGA | 2 cut(s) | 895, 1431 |
| TasI | AATT | 9 cut(s) | 20, 255, 284, 327, 348, 389, 1062, 1212, 1294 |
| Tru1I | TTAA | 4 cut(s) | 291, 347, 420, 468 |
| Tru9I | TTAA | 4 cut(s) | 291, 347, 420, 468 |
| TscAI | CASTG | 6 cut(s) | 631, 674, 822, 1125, 1238, 1500 |
| TseFI | GTSAC | 1 cut(s) | 1120 |
| TseI | GCWGC | 1 cut(s) | 451 |
| Tsp45I | GTSAC | 1 cut(s) | 1120 |
| TspDTI | ATGAA | 8 cut(s) | 579, 593, 720, 1056, 1254, 1378, 1467, 1491 |
| TspRI | CASTG | 6 cut(s) | 631, 674, 822, 1125, 1238, 1500 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1272 |
| Vha464I | CTTAAG | 1 cut(s) | 290 |
| VpaK11BI | GGWCC | 1 cut(s) | 903 |
| XapI | RAATTY | 5 cut(s) | 284, 327, 389, 1062, 1294 |
| XceI | RCATGY | 1 cut(s) | 1340 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 536 |
| XspI | CTAG | 2 cut(s) | 578, 1002 |